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Abstract Book of EAVLD2012 - eavld congress 2012

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S1 - P - 17<br />

VIROLOGICAL SURVEILLANCE AND CHARACTERIZATION OF AVIAN-LIKE REASSORTANT H1N2<br />

SWINE INFLUENZA VIRUSES IN SWEDEN<br />

Giorgi Metreveli , Eva Emmoth, Lena Renström<br />

National Veterinary Institute, Department <strong>of</strong> Virology, Immunobiology and Parasitology, Uppsala, Sweden<br />

Introduction<br />

The influenza A virus subtypes H1N1, H1N2 and H3N2 are<br />

prevalent in pig populations worldwide. In 2009 and 2010 there<br />

was the first reported isolations and demonstrations <strong>of</strong> natural<br />

reassortants <strong>of</strong> H1N2 viruses in pigs in Sweden (1,2).<br />

Characterized Swedish isolates possessed avian-like SIV H1N1<br />

HA and European H3N2 SIV-like NA. They were compared<br />

regarding their molecular composition and biological<br />

characteristics.<br />

Materials & methods<br />

Virus was isolated from the clinical material by infecting Madin<br />

Darby Canine Kidney (MDCK) (ATCC CCL-34) cells, following<br />

standard cell culture procedures. Viruses were analyzed by endpoint<br />

titration through cpe using 96-well plates containing MDCK<br />

cells, in 10-fold dilutions assaying eight replicates <strong>of</strong> 50 µl per<br />

dilution, and the virus titres after 6-8 days were calculated<br />

according to Kärber (3). NA enzyme activity and drug inhibition<br />

assays were performed with methylumbelliferone<br />

nacetylneuraminic acid (MUNANA) as the substrate. Genetic<br />

analyses were conducted on the clinical material and on the<br />

MDCK cell isolates. Total RNA was prepared from virus-infected<br />

MDCK cells by the QiagenRNeasy Mini kit, according to the<br />

manufacturer’s instructions (Qiagen, Hilden Germany).<br />

Sequencing templates were generated by amplification <strong>of</strong> each<br />

gene segment using one-step RT-PCR (QIAGEN OneStep RT-<br />

PCR Kit). The PCR products were purified using the ‘Purification<br />

Kit from Promega’ and sequenced using the fluorescent dye<br />

terminator method with an ABI PRISM® Big Dye Terminator<br />

Cycle Sequencing v3.1 Ready Reaction kit (Perkin Elmer,<br />

Waltham, MA, USA) on an ABI PRISM® 310 genetic analyzer<br />

according to the manufacturer’s recommendations (Applied<br />

Biosystems).Sequence data analyses, multiple alignments <strong>of</strong> the<br />

DNA sequences <strong>of</strong> each gene, were performed using CLC, Main<br />

Workbench 5.0.2 (CLC bio A/S, Aarhus, Denmark).<br />

Results<br />

The most remarkable result was a truncated coding region for<br />

PB1-F2 in the earlier isolates and a full length coding region in<br />

the more recent isolates. Concerning biological properties, these<br />

viruses reached lower titre and showed reduced<br />

cytopathogenicity in MDCK cells compared with an avian-like<br />

H1N1 isolate A/swine/Lidkoping/1193/2002 belonging to the<br />

same lineage as the 2009 and 2010 isolates.<br />

Figure 1: Always put legend below the figure<br />

Discussion & conclusions<br />

Recent serological investigations in Swedish pig population has<br />

also shown that this uncommon avian-like reassortant H1N2 SIV<br />

variant appears to be gaining a stronger foothold among Swedish<br />

pig populations and producing more clinical disease. The<br />

molecular genomic differences found here indicate that the virus<br />

population is steadily evolving. In order to determine the effect on<br />

the swine industry and influenza ecology, further surveillance<br />

investigations and detailed analyses are needed.<br />

References<br />

1 Bálint, A., et al., The first Swedish H1N2 swine influenza virus isolate represents<br />

an uncommon reassortant. Virology Journal, 2009. 6 Oct 28(180).<br />

2. Metreveli, G., et al. Comparison <strong>of</strong> two H1N2 swine influenza A viruses from<br />

disease outbreaks in pigs in Sweden during 2009 and 2010.Virus Genes, 2011.<br />

Apr;42(2):236-44<br />

3. Kärber, G., Beitrag zur kollektiven Behandlung pharmakologischer<br />

Reihenversuche. Archiv für experimentelle Pathologie und Pharmacologie, 1931.<br />

162: p. 480-483.<br />

Influenza A, swine, genetic characterization

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