2009 Proceedings - University of Colorado Denver
2009 Proceedings - University of Colorado Denver
2009 Proceedings - University of Colorado Denver
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<strong>University</strong> <strong>of</strong> <strong>Colorado</strong> <strong>Denver</strong><br />
12 th<br />
Annual<br />
Fri., April 24, <strong>2009</strong><br />
North Classroom Atrium
WELCOME TO THE <strong>2009</strong><br />
UNIVERSITY OF COLORADO DENVER<br />
RESEARCH AND CREATIVE ACTIVITIES SYMPOSIUM<br />
Friday, April 24, <strong>2009</strong><br />
DDC North Classroom Atrium<br />
10:00 – 12:00 GENERAL SESSION North Classroom 1130<br />
10:00 – 10:10 OPENING REMARKS: CU President Bruce Benson<br />
10:15 KEYNOTE ADDRESS 1:<br />
Introduction: Richard J. Traystman, PhD, Vice Chancellor for Research<br />
“High Notes”<br />
Eleanor N. Caulkins<br />
Lifetime Honorary Chair <strong>of</strong> Opera <strong>Colorado</strong><br />
11:00 STUDENT PRESENTATIONS<br />
Outstanding Research and Creative Activity Award Winners<br />
11:00: Jamie Carpio: Anthropology, College <strong>of</strong> Liberal Arts and Sciences<br />
Determining Bone Utility and Effectiveness as Tools: Termite Extraction at Lake<br />
Manyara, Tanzania during the Dry Season in Tanzania<br />
11:15: Dustin Neel: Geography-Earth Science, College <strong>of</strong> Liberal Arts and Sciences<br />
Isolation and Characterization <strong>of</strong> Cadmium-Resistant Bacteria<br />
11:30: David Sprunt: Landscape, Architecture & Urban Design, College <strong>of</strong> Architecture and<br />
Planning<br />
Hybridscape: A Proposal for Wynkoop Street and <strong>Denver</strong> Union Station<br />
11:45: Francie Hyndman: Cell Biology, Stem Cells, and Development, AMC Graduate School<br />
Misregulation <strong>of</strong> Dlx5/6 in Hand2 Mutants Leads to Loss <strong>of</strong> Tongue<br />
12:00 – 2:00 STUDENT EXHIBITS – North Classroom Atrium<br />
Students will present their research and creative projects in an informal setting.<br />
Light refreshments will be served<br />
2:00 – 2:30 KEYNOTE ADDRESS 2 – North Classroom 1130<br />
Introduction: Robert Damrauer, PhD, Special Asst. to the Provost<br />
“Gene Machines and Opportunities in Science"<br />
Pr<strong>of</strong>essor Marv Caruthers<br />
<strong>University</strong> <strong>of</strong> <strong>Colorado</strong>, Boulder, Department <strong>of</strong> Chemistry and Biochemistry<br />
2:30 – 3:00 AWARDS CEREMONY<br />
Chancellor M. Roy Wilson<br />
John Lanning, PhD, Asst. Vice Chancellor Undergraduate Experiences, UROP Chair<br />
• Outstanding Research and Creative Activities Awards Chancellor’s Awards for Excellence<br />
• Faculty Award for Outstanding Student Mentoring<br />
• UROP Awards<br />
2 <strong>2009</strong> Research and Creative Activities Symposium
TABLE OF CONTENTS<br />
Section<br />
Page<br />
Welcome Letter 4<br />
Committee Members and Sponsors 5<br />
Judges 6<br />
Undergraduate Titles and Authors 7-8<br />
Graduate Titles and Authors 9-12<br />
Undergraduate Abstracts 13-34<br />
Graduate Abstracts 35-69<br />
Local Middle School Award Winners 70<br />
<strong>2009</strong> Research and Creative Activities Symposium<br />
3
WELCOME<br />
RESEARCH and CREATIVE ACTIVIES SYMPOSIUM<br />
April 24, <strong>2009</strong><br />
I welcome you to the 12 th Annual Research and Creative Activities Symposium (RaCAS). This is the<br />
first joint RaCAS between the Downtown <strong>Denver</strong> and Anschutz Campuses, and we are here to celebrate our<br />
student’s accomplishments. Over 140 students are displaying 117 exhibits at this symposium.<br />
Discovery and creativity in learning is critical for the future <strong>of</strong> our students at the <strong>University</strong> <strong>of</strong><br />
<strong>Colorado</strong> <strong>Denver</strong> (UC<strong>Denver</strong>). The discovery based and creative works on display today are representative<br />
examples <strong>of</strong> the kind <strong>of</strong> activity we want all UC<strong>Denver</strong> students to experience. We are also particularly<br />
pleased to welcome our speakers today – Ms. Ellie Caulkins, who will share with us her experience in our<br />
morning talk called “High Notes”, and Dr. Marv Caruthers, who this afternoon will share with us his insights in<br />
a talk entitled “Gene Machines and Opportunities in Science".<br />
Many other individuals have demonstrated strong support for this symposium and are with us today.<br />
These include the President <strong>of</strong> our university, Bruce Benson, the Chancellor Dr. M. Roy Wilson, and the<br />
Provost Dr. Rod Nairn. Their leadership and support recognizes the importance <strong>of</strong> learning by doing.<br />
Enjoy yourself as you recognize the efforts <strong>of</strong> our undergraduate and graduate students. Stop them<br />
and engage them in conversations about their topics. I assure you that they will be thrilled to speak with you<br />
about their work.<br />
Finally, I would like to thank all <strong>of</strong> those whose efforts were critical to bring about this celebration <strong>of</strong><br />
student discovery and creativity.<br />
Best wishes and have a great time at our symposium.<br />
Richard J. Traystman, Ph.D.<br />
Pr<strong>of</strong>essor<br />
Vice Chancellor for Research<br />
<strong>University</strong> <strong>of</strong> <strong>Colorado</strong> <strong>Denver</strong><br />
4 <strong>2009</strong> Research and Creative Activities Symposium
PLANNING COMMITTEE MEMBERS<br />
Richard J. Traystman<br />
Joy Berrenberg<br />
Candy Berryman<br />
Leo Bruederle<br />
Robert Damrauer<br />
John Freed<br />
Jim Hageman<br />
Richard Johnston<br />
Steve Krizman<br />
Sean McGowan<br />
Jeremy Nemeth<br />
David Port<br />
Chancellor's Office (Chair)<br />
Psychology<br />
RaCAS Coordinator<br />
Biology<br />
Office <strong>of</strong> the Provost<br />
Graduate School<br />
Research Administration<br />
Dean's Office, SOM<br />
Integrated <strong>University</strong> Communications<br />
College <strong>of</strong> Arts and Media<br />
Urban Design<br />
Cardiology & Pharmacology<br />
L. Rafael Sanchez Mechanical Engineering<br />
Deanna Iceman Sands<br />
Karen Sousa<br />
Clark Strickland<br />
Chris Weible<br />
Danielle M. Zieg<br />
School <strong>of</strong> Education & Human Development<br />
School <strong>of</strong> Nursing<br />
College <strong>of</strong> Arts and Media<br />
School <strong>of</strong> Public Affairs<br />
Integrated <strong>University</strong> Communications<br />
SPONSORS<br />
Division <strong>of</strong> Student Affairs<br />
Office <strong>of</strong> the Vice Chancellor for Research<br />
Research Administration<br />
Undergraduate Experiences<br />
<strong>2009</strong> Research and Creative Activities Symposium<br />
5
JUDGES<br />
Larry Anderson<br />
Joy Berrenberg<br />
Roxanne Byrne<br />
Fred Chambers<br />
Laura Cuetara<br />
Micky Engel<br />
Jana Everett<br />
John Freed<br />
Mark Gelernter<br />
Michael Greene<br />
Jim Hageman<br />
Frank Jermance<br />
Joe Juhasz<br />
Jahangir Karimi<br />
Pam Laird<br />
Carl Pletsch<br />
Timberley Roane<br />
Stephanie A. Santorico<br />
Sheila Shannon<br />
Candice Shelby<br />
Renseng Su<br />
David Tracer<br />
Richard J. Traystman<br />
Chemistry, School <strong>of</strong> Liberal Arts and Sciences<br />
Psychology, School <strong>of</strong> Liberal Arts and Sciences<br />
Math, School <strong>of</strong> Liberal Arts and Sciences<br />
Geography, School <strong>of</strong> Liberal Arts and Sciences<br />
Theater, College <strong>of</strong> Arts and Media<br />
Biology, School <strong>of</strong> Liberal Arts and Sciences<br />
Political Science, College <strong>of</strong> Liberal Arts & Sciences<br />
Graduate School Administration, Graduate School<br />
Dean, College <strong>of</strong> Architecture and Planning<br />
Biology, College <strong>of</strong> Liberal Arts and Sciences<br />
Research Administration<br />
Music, College <strong>of</strong> Arts and Media<br />
College <strong>of</strong> Architecture and Planning<br />
Business School<br />
History, School <strong>of</strong> Liberal Arts and Sciences<br />
History, School <strong>of</strong> Liberal Arts and Sciences<br />
Biology, College <strong>of</strong> Liberal Arts and Sciences<br />
Math & Statistical Sciences, College <strong>of</strong> Liberal Arts and Sciences<br />
School <strong>of</strong> Education<br />
Philosophy, College <strong>of</strong> Liberal Arts and Sciences<br />
Dean <strong>of</strong> Engineering, School <strong>of</strong> Liberal Arts and Sciences<br />
Health & Behavioral Sciences, College <strong>of</strong> Liberal Arts and Sciences<br />
Vice Chancellor for Research<br />
6 <strong>2009</strong> Research and Creative Activities Symposium
Undergraduate Students<br />
Page Exhibit Location<br />
Atcherley, Christopher<br />
Open Circuit Potential Measurements to Characterize Interfaces 13 93<br />
Bates, Ariel<br />
Natural Stream Flow Estimates for <strong>Colorado</strong>: Using the NHDPlus Unit<br />
Run<strong>of</strong>f Method 13 90<br />
Bates, Ryan<br />
Lipid Activation <strong>of</strong> Src Tyronsine Kinase during Xenopus Sperm Fertilization<br />
and the Acrosome Reaction <strong>of</strong> Sperm 14 84<br />
Blakley, Scott<br />
Comparing Biophysical Characteristics <strong>of</strong> Wild Type and Stiff Mutants <strong>of</strong><br />
Phycomyces Blakesleeanus 14 86<br />
Blatner, Megan<br />
Characterizing and Ameliorating Cognitive Deficits <strong>of</strong> TS65Dn Mice – A<br />
Model <strong>of</strong> Down Syndrome – Using a Computerized Olfactometer 15 85<br />
Bollwerk, Luke<br />
Honesty Goal Priming: Effects on Socially Desirable Responding in Self<br />
Reports about Sexual Behavior 15 7<br />
Brady, Chris<br />
Image Acquisition <strong>of</strong> 3D Animation 16 42<br />
Carpio, Jamie<br />
Determining Bone Utility and Effectiveness as Tools: Termite Extraction at<br />
Lake Manyara, Tanzania during the Dry Season in Tanzania 16 9<br />
Davis, Briona<br />
Arts Bridge Digital Photography Project 17 117<br />
Davis-Nelson, Denise<br />
Gene Expression during Bioremediation <strong>of</strong> Polyaromatic Hydrocarbons by<br />
Pleurotus Ostreatus 17 79<br />
Deihimi , Sarah<br />
Determination <strong>of</strong> Doxycycline in Mouse Serum by High-Performance Liquid<br />
Chromatography: A Correlation <strong>of</strong> Rheumatoid Arthritis Disease to<br />
Concentration <strong>of</strong> Doxycycline in Serum 18 76<br />
Deitrick, Russell<br />
Active Galactic Nuclei Survey at Optical Frequencies 18 77<br />
Dunnet, Gareth<br />
Tuberculosis: The White Death 19 41<br />
Edens, Timmy<br />
Full Dome Content Creation 19 48<br />
Evans, Jerell<br />
Recreate 1908 20 113<br />
Fees, Colby<br />
Research into the Molecular Mechanism <strong>of</strong> Fertilization: Measuring the<br />
Affinity between Src and PA 20 75<br />
Heimbuch-Maybee, Tiffany<br />
Labor Supply Near Subsistence Income Levels 21 3<br />
Hickey, Molly<br />
Synthesis <strong>of</strong> GABA Analogues 21 71<br />
Jones, Brittany<br />
Political Subversion in Sir Gawain and the Green Knight: The Welsh<br />
Social Imaginary and National Identity in the 14th Century 22 25<br />
Keller, Racheal<br />
Variations in Maternal and Child Nutrition Across Cultures in Mondaña,<br />
Ecuador 22 56<br />
Lathrop, Jason<br />
N-Amino Acid (Ester-Protected) Thiophosphoramidates, A Step in the<br />
Preparation <strong>of</strong> Pseudotripeptides: A research Prototype for Undergraduate<br />
Chemistry Labs 23 63<br />
Levy, Jonathan<br />
Binding <strong>of</strong> Alcohol to Odorant Binding Protein 23 62<br />
<strong>2009</strong> Research and Creative Activities Symposium<br />
7
Undergraduate Students<br />
Page Exhibit Location<br />
McAllister, Mary<br />
Intersimple Sequence Repeat (ISSR) Markers and Their Potential for<br />
Evolutionary Research on the Rare <strong>Colorado</strong> Endemic, Penstemon<br />
degeneri 24 38<br />
McKenzie, Alexander<br />
Image Processing Diagnostics: Emphysema 24 61<br />
Metzler, Jennifer<br />
Adult Attachment Styles and Coping Strategies in College Students 25 60<br />
Neel, Dustin<br />
Isolation and Characterization <strong>of</strong> Cadmium-Resistant Bacteria 25 59<br />
O’Leary, Katy<br />
Heat Sinking in a Helim-3 Cryostat for SQUID Susceptometry 26 18<br />
Pavelko, Christina<br />
Correlation between Responsibility and Stigma in Patients with Lung<br />
Cancer, Type II Diabetes, and Cardiovascular Disease 26 27<br />
Persichetti, Jason<br />
Bacterial Gene Expression in Response to Toxic Metal Exposure 27 94<br />
Prokopov, Sergei<br />
If I Could, I Would: Ethics and Intervening in the Lives <strong>of</strong> Addicts 27 95<br />
Rosenberg, Lee<br />
Comparison between Static and Dynamic Scheduling Strategies for<br />
Linear Algebra DAG Based Multicore Algorithms 28 97<br />
Ruff, Adam<br />
Social Network Surveys in Math and Science Education 28 99<br />
Schamberg, Jay<br />
The Effects <strong>of</strong> Alcohol on Voice 29 32<br />
Schultz, Angela<br />
Pollen-Ovule Ratios as an Indicator <strong>of</strong> Breeding System in<br />
Penstemon Degeneri, a Rare <strong>Colorado</strong> Endemic 29 100<br />
Sirivanchai, Sara<br />
Expression Patterns <strong>of</strong> Male Germline Specific Promoters in<br />
Arabidopsis thaliana (Brassiecaceae) 130 101<br />
Strasser, Derek<br />
Investigation <strong>of</strong> Peptide Derivatives <strong>of</strong> 1-carboxyl-4-amino-2-aza-3-<br />
ixi-bicyelo [2.2.2] octane, A Rigid Bicyclic Dipeptide Analog 30 103<br />
Taussig, Matthew<br />
Mutating TCRzeta to Study SLAP-Dependent Ubiquitination 31 104<br />
Teodosijev, Sasa<br />
Path <strong>of</strong> Valor 31 45<br />
Traktinksiy, Igor<br />
Varicella Zoster Virus DNA Persist in Saliva after Herpes Zoster and<br />
Post-Herpetic Neuralgia 32 105<br />
Truong, Jason<br />
Daily-Round <strong>of</strong> Activity in Western Harvester Ant (Pogonomyrmex<br />
occidentalis) Colonies 32 106<br />
Van Anderson, Bradley<br />
Sugar Pine (Pinus lambertiana) seed harvesting behavior <strong>of</strong> the Clark’s<br />
Nutcracker (Nucifraga columbiana) in Crater Lake National Park, Oregon 33 108<br />
Valdez, Anisetta<br />
Copper Nickel 33 30<br />
Walker, Deandra<br />
Bronchopulmonary Dysplasia: Mechanisms <strong>of</strong> Injury and Repair in an<br />
Experimental Model <strong>of</strong> BPD 34 110<br />
Wiltjer, Drew<br />
CAM Records 34 46<br />
Wood, Rebecca<br />
Change as an Innovation in the <strong>Denver</strong> Elder Community: A Cost/<br />
Benefit Analysis 35 12<br />
8 <strong>2009</strong> Research and Creative Activities Symposium
Graduate Students<br />
Page Exhibit Location<br />
Bannon, Nathanael<br />
The Relationship between Hydrocarbons and Aggression in<br />
T. Caespitum 35 92<br />
Barringer, Lauren<br />
The Relationship between Whitebark Pine Health, Cone Production,<br />
and Seed Dispersal by Clark’s Nutcrackers: What is the Potential for<br />
Natural Regeneration? 35 91<br />
Beemer, Brandon<br />
Dynamic Interaction: A Measurement Scale Development and<br />
Empirical Validation 36 88<br />
Bennetts, Nicholas<br />
Importance <strong>of</strong> the Basic Helix-Loop-Helix Transcription Factor<br />
Hand2 in Crani<strong>of</strong>acial Development 36 87<br />
Bird, Kathryn<br />
Physician’s Attitudes and Practices on Overweight/Obesity 37 35<br />
Bishop, Jonathan<br />
A Role for Hand2 in Cell Survival during Facial Development 37 22<br />
Brocker, Chad<br />
ALDH7A1 is a Novel Aldehyde Dehydrogenase with Multiple<br />
Functions Including Protection from Oxidative Stress 38 112<br />
Campbell, Chelsea<br />
Clogging Potential <strong>of</strong> Pervious Concrete 38 82<br />
Chang, Ya-Wen<br />
Developing a Problem Space for Exploring the Educational<br />
Experiences <strong>of</strong> Immigrant Children from China: Language,<br />
Culture, and Learning 39 115<br />
Checketts, Matt<br />
Induction <strong>of</strong> Cell Death by Receptor Expressed in Lymphoid<br />
Tissue, a Recently Identified Necrosis Factor Receptor 39 81<br />
Chiang, Simon<br />
Automation <strong>of</strong> Web Applications and Iterative Searching for<br />
Post-Translational Modifications 40 15<br />
Crites, Katherine<br />
Characterizing Forest Fragmentation in Relation to C<strong>of</strong>fee<br />
Plantations in Mexico 40 89<br />
Crunk, Amanda<br />
2-Bromoethanamine (BEA) Induces Papillary Necrosis by<br />
Impairing Function <strong>of</strong> TonEBP Under Hypertonic Stress in<br />
Kidney Cells 41 80<br />
Dunn, Jeffrey<br />
Familial Idiopathic Scoliosis in Males: Localization to<br />
Chromosome 22q 41 114<br />
Dundas, Lindsey<br />
The Roles <strong>of</strong> HIF1 and HIF2 in Head and Neck Cancer 42 14<br />
English, Carol<br />
Annual Variation for Effective Pollination in Penstemon<br />
Degeneri Crosswhite (Plantaginaceae), a Rare <strong>Colorado</strong><br />
Endemic 42 50<br />
Foltz, Steven<br />
The Presence <strong>of</strong> a Mixed Use, Livable Development Embraces<br />
the Concept <strong>of</strong> Social Sustainability 43 74<br />
Frank, Nathan<br />
The Effect <strong>of</strong> Plasticity in cuticular hydrocarbon pr<strong>of</strong>iles on the collective<br />
Decision Making <strong>of</strong> Pavement Ant (Tetramorium caespitum) Colonies 43 73<br />
Garrison, Aris<br />
Affordable Green Housing 44 52<br />
Glazner, Gregory<br />
Characterizing Optical Properties <strong>of</strong> Photodynamic Therapy Sensitizers 44 72<br />
<strong>2009</strong> Research and Creative Activities Symposium<br />
9
Graduate Students<br />
Page Exhibit Location<br />
Greenebaum, Hilary<br />
Teacher’s Voices 45 8<br />
Hammerman, Susan<br />
Tracking Changes in miRNA Expression in Melanoma: A Path<br />
Towards Early Diagnosis and Targeted Therapies? 45 23<br />
Hines, Bruce<br />
Resonances in Superconducting Quantum Interference Device<br />
Series Array Amplifiers in Feedback Operation and at RF<br />
Frequencies 46 2<br />
Hockin, Matthew<br />
Nuclear Translocation <strong>of</strong> PKCl in Salivary Acinar Cells 47 9<br />
Hodges, Heather<br />
Lipid-Coated Nanoparticles as Mimics <strong>of</strong> Biological Membranes<br />
For C-Reactive Protein Detection 48 70<br />
Huang, Yun-Hsiang<br />
Electricity Generation and Treatment <strong>of</strong> High Strength Animal<br />
Liquid Waste Using Microbial Fuel Cells 48 39<br />
Huss, Sheila M.<br />
The Social Construction <strong>of</strong> the International Criminal Tribunal for<br />
The Former Yugoslavia 49 53<br />
Hyndman, Francie<br />
Misregulation <strong>of</strong> Dlx5/6 in Hand2 Leads to Loss <strong>of</strong> Tongue 49 69<br />
Ivashchenko, Anna<br />
Platelet Gene Expression in Acute Coronary Syndrome 50 4<br />
Johnson, Todd<br />
Detecting Mercury Fluorescence Signature through Two-Photon<br />
Mercury 51 19<br />
Juergens, Jeffery<br />
The Effects on the Modulation <strong>of</strong> Cav1.2 when AKAP79/150 is<br />
Covalently Linked to Calcineurin 51 68<br />
Kabadi, Sajit<br />
Ensuring Educational Continuity for First Generation College<br />
Students 52 36<br />
Kendrick, Aga<br />
Using Targeted Proteomics to Assess the Sirtuins on Liver<br />
Metabolism in Obesity 52 67<br />
Kester, Matthew<br />
Molecular Pr<strong>of</strong>iling <strong>of</strong> Bacterial Communities Associated with<br />
Mining Sediments 53 65<br />
Kim, Hyo-Jeong<br />
Technology Training <strong>of</strong> Internal Auditors: Impact <strong>of</strong> Advanced<br />
Feature Technology 53 66<br />
Kovacs, James<br />
Use <strong>of</strong> NMR to Define CR22:CRd Interactions in Solution Reveals<br />
Dual SCR1-2 Interface with C3d: Confirmation Using a Novel<br />
Ligand-Selective Inhibitory Peptide 54 64<br />
Kronoveter, Karen<br />
Quantitation <strong>of</strong> Energy Recovery Potential from Food Wastes<br />
Using Microbial Fuel Cells and Biochemical Methane Potential<br />
Assays 54 37<br />
Ling, Sarah<br />
Evaluating a Web-based Test Results System at an Urban<br />
STI Clinic 55 51<br />
Luce, Austine<br />
Children’s Worldviews from China, Singapore and the United States:<br />
Implications for Research, Teaching and Learning in Science and<br />
Science Education 55 116<br />
Lugliani, Matthew<br />
Motivational Interviewing in Skin Cancer Prevention 56 10<br />
10 <strong>2009</strong> Research and Creative Activities Symposium
Graduate Students<br />
Page Exhibit Location<br />
Manderino, Laurie<br />
Voluntary Environmental and Policy Issues 56 82<br />
Mandt, Bruce<br />
Individual Differences in Cocaine Responsiveness Predict Motivation<br />
to Self-Administer Cocaine in Male Sprague-Dawley Rats 57 78<br />
McPartland, Susan<br />
Analyzing Accessibility to Forest Areas in Mexico 57 16<br />
Mendelsberg, Scott<br />
Bureaucratic Entrepreneurship in Education: Case Study 58 28<br />
Mullin, Katherin<br />
Re-Imaging Healing and Childbirth: Visual Narratives in Complementary<br />
and Alternative Medicine 58 43<br />
Nelson, Christian<br />
Neonatal Resuscitation Capacity in Nepal 59 47<br />
Ngo, Linda<br />
The Power <strong>of</strong> Words 59 24<br />
Nicosia, Francesca<br />
Dying Wish: A Documentary about Stopping Eating and<br />
Drinking at the End-<strong>of</strong>-Life 60 20<br />
Nielson, Nieve<br />
Revealing Landscapes: Using Fire as a Design Element in<br />
Landscape Architecture 60 33<br />
On<strong>of</strong>rei, Ligia<br />
Long-Term DBS Effects on Parkinson’s Disease Motor Symptoms<br />
Support Neuromodulation as the Possible Mechanism <strong>of</strong><br />
Action <strong>of</strong> DBS 61 17<br />
Oviatt, Kate<br />
Natural Disasters and Sustainable Livelihoods: Exploring Local<br />
Capacity in Tarjia, Bolivia 61 58<br />
Palisoc, Alma<br />
Racial/Ethnic and Socioeconomic Differences in Five-Year Cancer<br />
Survival in <strong>Colorado</strong>, 1999-2002 62 57<br />
Reardon, Lindsay<br />
Divergence between CRT Non-responder Rates Based on the NYHA<br />
Class Assessment and 6-minute Hall Walk Distance Criteria: Results<br />
from the Response-HF Trial 63 96<br />
Reck, Jordan<br />
Challenging the Past: Transformation Through Problem Focused<br />
Field Schools 64 11<br />
Rosskamm, Shoshana<br />
A Probabalistic Neural Network using the Haralick Transform to<br />
Segment Ribs in Chest Digital Radiographs 64 98<br />
Schumacher, Kristin<br />
Social Construction and Policy Design Framework: Analysis <strong>of</strong><br />
Current Applications 65 1<br />
Snyder, Joshua<br />
Phosphatidic Acid Induced Membrane Depolarization via Activation<br />
<strong>of</strong> Intracellular Calcium Dependent Chloride Channels in Xenopus<br />
leavis Oocytes 65 31<br />
Sousedik, Bedrich<br />
Adaptive-Multilevel BDDC 66 102<br />
Sprunt, David<br />
Hybridscape: A Proposal for Wynkoop Street & <strong>Denver</strong> Union Station 66 26<br />
Unhasuta, Krongdai<br />
Development <strong>of</strong> Core Competency for Trauma Nurses in Thailand 67 107<br />
Van Campen, Christy<br />
Bioaccumulation <strong>of</strong> Heavy Metals by Mushrooms Growing Near<br />
Active and Abandoned Mines 67 109<br />
<strong>2009</strong> Research and Creative Activities Symposium<br />
11
Graduate Students<br />
Page Exhibit Location<br />
Wilson, Denise C.<br />
Pollination Biology <strong>of</strong> the Stream Orchid, Epipactis gigantean,<br />
(Dougl. Ex Hook) at Three <strong>Colorado</strong> Elevations 68 111<br />
Wilson, Nicholas<br />
Nanogel-Modified Dental Adhesives 69 5<br />
12 <strong>2009</strong> Research and Creative Activities Symposium
Undergraduate Students<br />
Open Circuit Potential<br />
Measurements to Characterize<br />
Interfaces<br />
Christopher Atcherley, Chemistry, DC - College <strong>of</strong><br />
Liberal Arts and Sciences<br />
Faculty Sponsor: Dr. Mark Anderson, DC - College<br />
<strong>of</strong> Liberal Arts and Sciences<br />
Activity Type: Undergraduate Research<br />
The thermodynamics <strong>of</strong> a chemically reversible redox<br />
half-reaction will establish the potential <strong>of</strong> a<br />
heterogeneous interface in contact with a solution<br />
containing the oxidized and reduced forms <strong>of</strong> the<br />
redox reaction. This relationship is established by the<br />
well known Nernst equation: If the redox couple is<br />
composed <strong>of</strong> ions, chemical modification <strong>of</strong> the<br />
heterogeneous interface may potentially impact the<br />
local concentration <strong>of</strong> the oxidized and/or reduced<br />
form <strong>of</strong> the redox couple. The influence <strong>of</strong> the<br />
monolayer on the local concentrations <strong>of</strong> the redox<br />
couple may alter the potential <strong>of</strong> the interface.<br />
Measuring the potential, therefore, provides a simple<br />
mechanism for characterizing the interface. In this<br />
research, we measure the potential <strong>of</strong> the Fe(CN)6-<br />
3/Fe(CN)6-4 redox couple using the following<br />
conditions: an unmodified gold electrode, a gold<br />
electrode modified with a monolayer <strong>of</strong> n-octanethiol,<br />
and an electrode modified with a monolayer <strong>of</strong> 3-<br />
mercaptopropanoic acid. The influence <strong>of</strong> the surface<br />
modification <strong>of</strong> the potential measured is evaluated.<br />
For the 3-mercaptopropanoic acid modified interface,<br />
the influence <strong>of</strong> the interfacial charge on the<br />
measured potential is determined as a function <strong>of</strong><br />
solution pH. In this manner, the interfacial layer can<br />
be titrated and the interfacial pKa determined.<br />
Natural Stream Flow Estimates for<br />
<strong>Colorado</strong>: Using the NHDPlus Unit<br />
Run<strong>of</strong>f Method<br />
Ariel Bates, Geography, DC - College <strong>of</strong> Liberal Arts<br />
and Sciences<br />
Faculty Sponsor: Dr. Rafael Moreno, DC - College<br />
<strong>of</strong> Liberal Arts and Sciences<br />
Activity Type: Undergraduate Research<br />
This poster presents the methodology and results <strong>of</strong><br />
the Nation Hydrography Dataset Plus (NHDPlus) Unit<br />
Run<strong>of</strong>f Method (UROM) calculations for modeling<br />
natural streamflow in <strong>Colorado</strong>. The intent <strong>of</strong> the<br />
poster is to show the characteristics <strong>of</strong> <strong>Colorado</strong>'s<br />
drainage network and how the tributary system<br />
converges into larger and larger arteries to form the<br />
major rivers that drain the state. The poster does not<br />
represent actual streamflow, but rather modeled<br />
streamflow based on the UROM model. The USGS<br />
streamgages in the Hydro Climatic Data Network<br />
(HCDN) were selected for developing the unit run<strong>of</strong>f<br />
values because they represent relatively natural<br />
hydrologic conditions and are not influenced by<br />
controlled releases from reservoirs. Further, only<br />
gages with a drainage area less than the drainage<br />
area <strong>of</strong> the subbasin where the gage is located were<br />
selected so that the discharge data represents run<strong>of</strong>f<br />
for only that subbasin. This is important because<br />
<strong>Colorado</strong> has the headwaters <strong>of</strong> four major rivers<br />
contained within the state, by reviewing this drainage<br />
pattern it is possible to better understand <strong>Colorado</strong>'s<br />
drainage network. This poster is also important<br />
because it shows how different tunings applied to<br />
rivers can effect the values and thus the suitability <strong>of</strong><br />
the UROM algorithm.<br />
<strong>2009</strong> Research and Creative Activities Symposium 13
Undergraduate Students<br />
Lipid Activation <strong>of</strong> Src Tyrosine<br />
Kinase during Xenopus Sperm<br />
Fertilization and the Acrosome<br />
Reaction <strong>of</strong> Sperm<br />
Ryan Bates, Biology, DC - College <strong>of</strong> Liberal Arts<br />
and Sciences<br />
Faculty Sponsor: Dr. Brad J. Stith, DC - College <strong>of</strong><br />
Liberal Arts and Sciences<br />
Activity Type: Undergraduate Research<br />
The current model for Xenopus fertilization finds that<br />
sperm somehow activate Src tyrosine kinase which in<br />
turn activates PLCgamma (an enzyme central to<br />
fertilization). We suggest that sperm activate<br />
phospholipase D1b (PLD1b) to increase phosphatidic<br />
acid (PA). My work in Dr. Stith’s lab has shown that<br />
PA specifically binds Src (PIP Strips, Echelon Biosci<br />
Inc) and its addition activates Src and PLC gamma. A<br />
PLD1b inhibitor decreased phosphatidic acid at<br />
fertilization, fertilization events (using<br />
videomicroscopy) and Src activation (the inactive<br />
derivative had no effect). A second line <strong>of</strong> my<br />
research involves a study <strong>of</strong> the acrosome reaction<br />
(AR) in sperm- an event that is required for<br />
subsequent fertilization. As many recent reports<br />
suggest that activation <strong>of</strong> a tyrosine kinase (like Src)<br />
induces the AR, as our other work suggests that PA<br />
can activate Src and that there is an increase in PA<br />
during the AR, I note that an AR agonist or PA<br />
addition to Xenopus sperm increased tyrosine<br />
phosphorylation in similar proteins at 54 kDa, 33 kDa,<br />
25kDa, and at 47kDa (Western blotting detection;<br />
Anti-Phosphotyrosine antibody 2C8, Calbiochem<br />
525293). Currently, we are examining the protein<br />
bands and the proteins exocytosed with mass<br />
spectroscopy.<br />
Comparing Biophysical<br />
Characteristics <strong>of</strong> Wild Type and<br />
Stiff Mutants <strong>of</strong> Phycomyces<br />
blakesleeanus<br />
Scott Blakley, Mechanical Engineering, DC -<br />
College <strong>of</strong> Engineering and Applied Science<br />
Cindy Munoz, Mechanical Engineering, DC - College<br />
<strong>of</strong> Engineering and Applied Science<br />
Jason Truong, Biology, DC - College <strong>of</strong> Liberal Arts<br />
and Sciences<br />
Elena Ortega, Mathematics, DC - College <strong>of</strong> Liberal<br />
Arts and Sciences<br />
Faculty Sponsor: Dr. Joseph K. E. Ortega, DC -<br />
College <strong>of</strong> Engineering and Applied Science<br />
Activity Type: Graduate Research<br />
The sporangiophores <strong>of</strong> Phycomyces blakesleeanus<br />
are large cylindrical single fungal cells that grow in<br />
length at the fast rate <strong>of</strong> 30-50 μm/min. Equations<br />
have been derived to describe the elongation growth<br />
rate in terms <strong>of</strong> biophysical variables, i.e. the<br />
Augmented Growth Equations. An important<br />
biophysical variable is the pressure inside the cell,<br />
i.e. the turgor pressure. Importantly, we have<br />
constructed a device to measure and control the<br />
turgor pressure inside the sporangiophore (pressure<br />
probe) which can be used to determine the<br />
biophysical variables within the Augmented Growth<br />
Equations. The sporangiophore responds to many<br />
sensory stimuli with changes in elongation growth<br />
rate, e.g. if the sporangiophore is placed in a<br />
horizontal position, it will grow to a vertical position in<br />
approximately 40 min (geotropic response). Mutants<br />
have been identified which do not exhibit a geotropic<br />
response (stiff mutants). We have conducted<br />
pressure-probe experiments to determine the<br />
magnitude <strong>of</strong> the relevant biophysical variables in the<br />
wild type sporangiophores and the stiff mutants. The<br />
biophysical variables <strong>of</strong> the wild type and stiff<br />
mutants are compared to determine what changes in<br />
the underlying biophysical variables accompany the<br />
absence <strong>of</strong> the geotropic response.<br />
14 <strong>2009</strong> Research and Creative Activities Symposium
Undergraduate Students<br />
Characterizing and Ameliorating<br />
Cognitive Deficits <strong>of</strong> TS65Dn Mice -<br />
A Model <strong>of</strong> Down Syndrome -Using<br />
A Computerized Olfactometer<br />
Megan Blatner, Biology, DC - College <strong>of</strong> Liberal Arts<br />
and Sciences<br />
Faculty Sponsor: Dr. Diego Restrepo, AMC -<br />
School <strong>of</strong> Medicine<br />
Activity Type: Undergraduate Research<br />
We tested the learning performance <strong>of</strong> trisomic<br />
TS65Dn mice and disomic littermates in a<br />
computerized go-no go task where mice learned to<br />
discriminate between the odors <strong>of</strong> citral (10% in<br />
mineral oil) and mineral oil. We concluded that at<br />
least some <strong>of</strong> the trisomics are able to perform the<br />
task, but the disomics require about half the number<br />
<strong>of</strong> trials to reach a learning criterion<br />
(disomic=343±249 trials, trisomic=716±342 trials,<br />
n=6, P=0.035, paired student t-test). When we<br />
presented a new odor pair (1% propionic acid versus<br />
a 1:1 mix <strong>of</strong> 1% propionic acid and benzaldehyde)<br />
the disomic mice performed significantly better than<br />
trisomics (F=8.39, P=0.0046, n=6, Anova Two-Way<br />
statistic). We also performed an additional odor<br />
search test were the animal has to dig to find a petri<br />
dish containing peanut butter, and we observe that<br />
the disomics find the peanut butter about two times<br />
faster than the trisomics (disomic delay=2.39±0.79<br />
min, trisomic delay=4.89±2.08 min, n=6, P=0.037,<br />
paired student t-Test). Our hypothesis is that learning<br />
deficits <strong>of</strong> trisomic TS65Dn mice are due to<br />
decreased cholinergic innervation <strong>of</strong> key brain areas.<br />
After finishing characterization <strong>of</strong> behavioral deficits<br />
<strong>of</strong> the trisomic mice we plan to alleviate the deficits<br />
by performing deep brain stimulation in the<br />
cholinergic basal forebrain, and i.p. injections <strong>of</strong><br />
galantamine to improve performance <strong>of</strong> synaptic<br />
transmission by basal forebrain cholinergic neurons.<br />
Honesty Goal Priming: Effects on<br />
Socially Desirable Responding in<br />
Self Reports About Sexual<br />
Behavior<br />
Luke Bollwerk, Psychology, DC - College <strong>of</strong> Liberal<br />
Arts and Sciences<br />
Faculty Sponsor: Dr. Elizabeth Allen, DC - College<br />
<strong>of</strong> Liberal Arts and Sciences<br />
Activity Type: Undergraduate Research<br />
2008-<strong>2009</strong> UROP Award Winner<br />
There is evidence that social desirability bias elicited<br />
by sensitive questions reduces the accuracy <strong>of</strong> self<br />
report data. Rasinski et al. (2005) found that the goal<br />
<strong>of</strong> honesty may be implicitly primed using a word<br />
search task containing words related to honesty,<br />
thereby eliciting reduced socially desirable<br />
responding in a subsequent measure containing<br />
sensitive questions about alcohol use. The purpose<br />
<strong>of</strong> this study is to reproduce these findings with<br />
sensitive items about sexual behavior under the<br />
condition <strong>of</strong> anonymity and increased privacy. In<br />
addition, the effect <strong>of</strong> computerized administration is<br />
explored. A 2x2 factorial design was used to<br />
determine the effect <strong>of</strong> honesty goal priming vs.<br />
neutral goal priming and audio computer assisted self<br />
interview (ACASI) vs. a pencil and paper self<br />
administered questionnaire (SAQ) on socially<br />
desirable responding. 230 participants were recruited<br />
from Auraria campus and were randomly divided into<br />
four groups. The hypothesis that there would be<br />
reduced socially desirable responding in the honesty<br />
primed ACASI group was unsupported by Kruskal-<br />
Wallis tests and there were no reliable and significant<br />
differences between groups. The results are<br />
discussed along with possible reasons for the<br />
unexpected outcome.<br />
<strong>2009</strong> Research and Creative Activities Symposium 15
Undergraduate Students<br />
Image Acquisition for 3D Animation<br />
Chris Brady, Digital Animation, DC - College <strong>of</strong> Arts<br />
and Media<br />
Faculty Sponsor: Mr. Tripp Vroman, DC - College<br />
<strong>of</strong> Arts and Media<br />
Activity Type: Undergraduate Research<br />
2008-<strong>2009</strong> UROP Award Winner<br />
The use <strong>of</strong> photography represents a large portion <strong>of</strong><br />
the visual information that is seen in modern<br />
animation. Photographic processes have been<br />
developed primarily for print mediums. These<br />
processes are optimal for photographers but<br />
inefficient and problematic for animators. This<br />
research addresses the pitfalls <strong>of</strong> the Bayer Sensor<br />
method <strong>of</strong> capturing images, the implications <strong>of</strong><br />
working with nonlinear image data, and the optimal<br />
method <strong>of</strong> storage for image information. With our<br />
research we have developed, and will demonstrate,<br />
methods <strong>of</strong> overcoming the pitfalls <strong>of</strong> image<br />
acquisition for animation. In compensating for Bayer<br />
Sensors, file sizes can be decreased by 75% and<br />
final renders maintain higher contrast. Compensating<br />
for nonlinear image information can prevent the<br />
“washed out” low contrast visuals <strong>of</strong>ten associated<br />
with animation. This is accomplished through and<br />
avoidance repeated anti aliasing and observation <strong>of</strong><br />
gamma space. Finally the storage <strong>of</strong> images in a<br />
lossless format that is also compressed yields high<br />
efficiency and higher image quality. Given the high<br />
cost in time and equipment with 3D animation, these<br />
methods can save budgets thousands <strong>of</strong> dollars. In<br />
addition to cost and time savings, these methods<br />
increase image fidelity. Statistics and visuals will be<br />
provided in the presentation.<br />
Determining Bone Utility and<br />
Effectiveness as Tools: Termite<br />
Extraction at Lake Manyara,<br />
Tanzania during the Dry Season in<br />
Tanzania<br />
Jamie Carpio, Anthropology, DC - College <strong>of</strong> Liberal<br />
Arts and Sciences<br />
Faculty Sponsor: Dr. Charles Musiba, DC - College<br />
<strong>of</strong> Liberal Arts and Sciences<br />
Activity Type: Undergraduate Research<br />
2008-<strong>2009</strong> UROP Award Winner<br />
<strong>2009</strong> Outstanding Research and Creative<br />
Activities Award Winner<br />
Taphonomic evidence <strong>of</strong> bone surface modification<br />
for tool use by early hominins was recently<br />
recognized at Swartkrans in South Africa by Backwell<br />
and d’Errico; however, very little taphonomic<br />
research <strong>of</strong> this type has been conducted in East<br />
African Pliocene sites. During the 2008 UCD<br />
Tanzanian field school in anthropology at Laetoli, we<br />
conducted experiments to test whether bones<br />
recovered from recent death assemblages could be<br />
modified and used for termite fishing at mounds near<br />
Lake Manyara. Bone tools were modified and used to<br />
puncture termite mounds, thus creating a use wear<br />
pattern that would be indicative <strong>of</strong> tool use and<br />
compared with fragmented fossil bones found at<br />
Laetoli. A scan electron microscope (SEM) was used<br />
to examine bone surface modification associated with<br />
tool use (polishing and striations) that match those<br />
reported from Swartkrans as possible evidence <strong>of</strong><br />
Australopithecines early bone modification and tool<br />
use for termite fishing. We report that to achieve the<br />
greatest number <strong>of</strong> termites, in terms <strong>of</strong> calorific<br />
intake, with the least amount <strong>of</strong> energy expended<br />
most likely occurred shortly after the rain season or at<br />
locations where mounds are in close proximity to<br />
water sources.<br />
16 <strong>2009</strong> Research and Creative Activities Symposium
Undergraduate Students<br />
Arts Bridge Digital Photography<br />
Project<br />
Briona Davis, Photography, DC - College <strong>of</strong> Arts and<br />
Media<br />
Lawrence Hass, Photography, DC - College <strong>of</strong> Arts<br />
and Media<br />
Magdalena Banuelos, Photography, DC - College <strong>of</strong><br />
Arts and Media<br />
Joseph Garcia, Photography, DC - College <strong>of</strong> Arts<br />
and Media<br />
Faculty Sponsor: Dr. Joann Brennan, DC - College<br />
<strong>of</strong> Arts and Media<br />
Activity Type: Undergraduate Creative Activity<br />
The ArtsBridge Digital Photography Project at The<br />
Children’s Hospital was created to inspire young<br />
individuals who are facing an illness and help them<br />
refocus their attention from their treatments and<br />
engage them with a hands on photographic<br />
exploration. Four photographers from the <strong>University</strong><br />
<strong>of</strong> <strong>Colorado</strong> <strong>Denver</strong>, College <strong>of</strong> Arts and Media,<br />
including myself, facilitated this project and worked<br />
directly with the children to create their artwork.<br />
There were a total <strong>of</strong> 17 children who participated in<br />
the program who worked during a three-hour session<br />
to create their complete work <strong>of</strong> art. During each<br />
session, children learned how to operate a digital<br />
camera, compose photographs, make deliberate<br />
choices within the principals and elements <strong>of</strong> design,<br />
download the images onto a computer and then<br />
manipulate the photographs with Photoshop to form a<br />
one <strong>of</strong> a kind image. The children took pictures <strong>of</strong> the<br />
architecture inside and outside the hospital for<br />
privacy reasons and used their handprint to sign their<br />
artwork. The works created by the children were full<br />
<strong>of</strong> textures, patterns, designs, colors, and expression.<br />
Each work <strong>of</strong> art captured a unique personal story <strong>of</strong><br />
their experience with their treatment and their own<br />
creativity. The final prints were 16x20 color<br />
photographs.<br />
Gene Exprssion During<br />
Bioremediation <strong>of</strong> Polyaromatic<br />
Hydrocarbons by Pleurotus<br />
ostreatus<br />
Denise Davis-Nelson, Biology, DC - College <strong>of</strong><br />
Liberal Arts and Sciences<br />
Faculty Sponsor: Dr. Michele Engel, DC - College <strong>of</strong><br />
Liberal Arts and Sciences<br />
Activity Type: Undergraduate Research<br />
Polycyclic aromatic hydrocarbons (PAH) are<br />
prevalent environmental pollutants. Wood growing<br />
mushrooms are promising bioremediators <strong>of</strong> PAHs<br />
because many <strong>of</strong> the enzymes they secrete to<br />
degrade lignin are also capable <strong>of</strong> oxidizing PAHs.<br />
Biochemists have identified a number <strong>of</strong> enzymes<br />
used by oyster mushrooms to degrade PAHs but,<br />
little research has examined gene expression during<br />
PAH degradation. Two isolates <strong>of</strong> oyster mushrooms:<br />
a commercial strain and a strain found growing on a<br />
tree that had been killed by an oil spill will be<br />
examined in this study. The gene expression pr<strong>of</strong>iles<br />
<strong>of</strong> the isolates in the presence and absence <strong>of</strong> PAHs<br />
will be investigated. The project will initially focus on<br />
the gene expression <strong>of</strong> protein coding genes<br />
predicted in the literature to be involved in PAH<br />
degradation. Additionally, to identify other genes<br />
involved in biochemical pathways active in PAH<br />
degradation that have not been previously identified<br />
by biochemical methods, a cDNA- amplified fragment<br />
length polymorphism technique will be employed.<br />
cDNA-AFLP is a very versatile technique that does<br />
not require prior sequence knowledge <strong>of</strong> the genes<br />
and can be used to identify novel genes. Ultimately,<br />
this research will lead to a better understanding <strong>of</strong><br />
PAH bioremediation and potentially identify genes<br />
responsible for the xenobiotic metabolism.<br />
<strong>2009</strong> Research and Creative Activities Symposium 17
Undergraduate Students<br />
Determination <strong>of</strong> Doxycycline in<br />
Mouse Serum by High-Performance<br />
Liquid Chromatography: A<br />
Correlation <strong>of</strong> Rheumatoid Arthritis<br />
Disease to Concentration <strong>of</strong><br />
Doxycycline in Serum<br />
Sarah Deihimi, Chemistry, DC - College <strong>of</strong> Liberal<br />
Arts and Sciences<br />
Faculty Sponsor: Dr. Douglas F. Dyckes and Dr.<br />
Lisa Lanning, DC - College <strong>of</strong> Liberal Arts and<br />
Sciences<br />
Activity Type: Undergraduate Research<br />
A simple reverse phase high performance liquid<br />
chromatography (HPLC) method for the separation <strong>of</strong><br />
doxycycline from mouse serum was adapted and<br />
developed. The HPLC conditions were derived from a<br />
previous study by Skulason et al. The column used<br />
was a Partisil® 5μm C8 100mm x 4.6 mm and a<br />
mobile phase consisting <strong>of</strong> acetonitrile: water:<br />
perchloric acid (HClO4) (26: 74: 0.25) adjusted to a<br />
pH <strong>of</strong> 2.5 with 5 M sodium hydroxide. The drug<br />
doxycycline and internal standard oxytetracycline<br />
were detected with a UV Vis Spectrophotometer at<br />
350 nm. A calibration curve was constructed with a<br />
detection range <strong>of</strong> 0.5-100 ppm and correlation<br />
coefficient (R2) <strong>of</strong> 0.9974. Three sets <strong>of</strong> serum from<br />
rheumatoid-induced mice given 10 mg/kg, 25 mg/kg<br />
or 0 mg/kg (control) <strong>of</strong> doxycycline were analyzed for<br />
the concentration <strong>of</strong> the drug. Unexpectedly a<br />
significant concentration <strong>of</strong> doxycycline was seen in<br />
six samples from the control group, questioning the<br />
validity <strong>of</strong> the data.<br />
Active Galactic Nuclei Survey at<br />
Optical Frequencies<br />
Russell Deitrick, Physics, DC - College <strong>of</strong> Liberal<br />
Arts and Sciences<br />
Faculty Sponsor: Dr. Alberto Sadun, DC - College<br />
<strong>of</strong> Liberal Arts and Sciences<br />
Activity Type: Undergraduate Research<br />
2008-<strong>2009</strong> UROP Award Winner<br />
Active Galactic Nuclei (AGN) are distant objects<br />
which are integral to modern theories <strong>of</strong> galactic<br />
formation and the formation <strong>of</strong> the universe. AGN are<br />
not currently well understood. It is believed that they<br />
are caused by accretion <strong>of</strong> material into<br />
supermassive black holes which are essential to the<br />
formation <strong>of</strong> galaxies. AGN were much more<br />
common in the early universe than today, thus we<br />
must look into the distant universe, and thus the<br />
distant past, to observe them. AGN emit radiation<br />
across the frequency spectrum; the observations <strong>of</strong><br />
several AGN at optical frequencies have been made<br />
by myself and my associates and contribute to<br />
international databases maintained by WEBT and<br />
VERITAS. Using CCD cameras and telescopes at<br />
different locations around the world, we have used<br />
optical filters to plot the lightcurve <strong>of</strong> various AGN,<br />
such as 3c66a and 1ES1959. We hope that with the<br />
continued observation <strong>of</strong> the brightnesses <strong>of</strong> these<br />
objects we may begin to understand how they form<br />
and evolve with time.<br />
18 <strong>2009</strong> Research and Creative Activities Symposium
Undergraduate Students<br />
Tuberculosis: The White Death<br />
Gareth Dunnet, Film, DC - College <strong>of</strong> Arts and<br />
Media<br />
Aaron Kopp, Film, DC - College <strong>of</strong> Arts and Media<br />
Faculty Sponsor: Mr. Hans Rosenwinkel, DC -<br />
College <strong>of</strong> Arts and Media<br />
Activity Type: Undergraduate Creative Activity<br />
2008-<strong>2009</strong> UROP Award Winner<br />
Tuberculosis: The White Death is a captivating<br />
documentary film that tracks the history and dark<br />
specter <strong>of</strong> this ongoing blight to public health. Once<br />
believed to be under control, tuberculosis is currently<br />
on a comeback route <strong>of</strong> epic proportions. TB: The<br />
White Death will aim to educate through innovative<br />
film techniques and storytelling. Its broad historical<br />
perspective will trace the disease’s dark path through<br />
antiquity and folklore. In addition to dramatic<br />
recreations <strong>of</strong> Koch performing experiments in his<br />
lab, the film will include visual reenactments <strong>of</strong> his<br />
prominent lectures as well as remarks upon receiving<br />
his Nobel Prize. will be portrayed. As seen from a<br />
microscope, sophisticated animations <strong>of</strong> his groundbreaking<br />
research will be depicted. Augmented by<br />
worldwide interviews with experts and victims, the<br />
narrative will bring TB’s dark shadow into the present.<br />
Drawing upon the technical and creative expertise <strong>of</strong><br />
the National Jewish Medical and Research Center,<br />
the <strong>University</strong> <strong>of</strong> <strong>Colorado</strong> <strong>Denver</strong>’s College <strong>of</strong> Arts<br />
and Media and Digital Animation Center, and the<br />
Anschutz Medical Campus, Tuberculosis: The White<br />
Death is a timely and informative investigation that<br />
dramatically explores the history and global portent <strong>of</strong><br />
this resilient scourge <strong>of</strong> mankind.<br />
Full Dome Content Creation<br />
Timmy Edens, Digital Design, DC - College <strong>of</strong> Arts<br />
and Media<br />
Faculty Sponsor: Mr. Bryan Leister, DC - College <strong>of</strong><br />
Arts and Media<br />
Activity Type: Undergraduate Research<br />
2008-<strong>2009</strong> UROP Award Winner<br />
Fulldome content is an art medium that requires high<br />
performance rendering technology to produce Dome<br />
master imaging for planetarium style projections. The<br />
Apple computer lab in Room NC1407 at the<br />
<strong>University</strong> <strong>of</strong> <strong>Colorado</strong> <strong>Denver</strong> has been optimized as<br />
a render farm to process and produce this large<br />
format video. The content that we created using the<br />
render farm was shown at the Gates Planetarium<br />
during the CAM 360 Dome event March 30, <strong>2009</strong> and<br />
proved that the College has the available resources<br />
to facilitate the production <strong>of</strong> this medium as an art<br />
form. The College <strong>of</strong> Arts and Media at The<br />
<strong>University</strong> <strong>of</strong> <strong>Colorado</strong> <strong>Denver</strong> is now one <strong>of</strong> the few<br />
places in the world that can <strong>of</strong>fer fulldome content at<br />
a world-class pr<strong>of</strong>essional level. To achieve the<br />
results that we have it has taken the cooperation <strong>of</strong><br />
UCD along with <strong>Denver</strong> Museum <strong>of</strong> Nature and<br />
Science and the sponsorship <strong>of</strong> IMERSA (Immersive<br />
Media Entertainment, Research, Science, & Arts)<br />
<strong>2009</strong> Research and Creative Activities Symposium 19
Undergraduate Students<br />
Recreate 1908<br />
Jerell Evans, theatre/film, DC - College <strong>of</strong> Arts and<br />
Media<br />
Faculty Sponsor: Laura Cuetara, DC - College <strong>of</strong><br />
Arts and Media<br />
Activity Type: Undergraduate Creative Activity<br />
2008-<strong>2009</strong> UROP Award Winner<br />
Recreate 1908, was an extensive reach creative<br />
project that, took a lot <strong>of</strong> focus and dedication. The<br />
four <strong>of</strong> us researched all the important facts that took<br />
place during the first democratic convention, and<br />
created a preformace based on those events. The<br />
outcome was a sucess for us, we was awarded best<br />
historical performance by the west word news paper<br />
and by cbs news. Doing this research project has<br />
created many different doors for all <strong>of</strong> our feautures<br />
and we apprecated the opportunity and hope it can<br />
inspire others.<br />
Research into the Molecular<br />
Mechanism <strong>of</strong> Fertilization:<br />
Measuring the Affinity between Src<br />
and PA<br />
Colby Fees, Biology, DC - College <strong>of</strong> Liberal Arts<br />
and Sciences<br />
Pengsue Yang, Biology, DC - Graduate School<br />
Faculty Sponsor: Dr. Brad Stith, DC - College <strong>of</strong><br />
Liberal Arts and Sciences<br />
Activity Type: Undergraduate Research<br />
2008-<strong>2009</strong> UROP Award Winner<br />
The molecular mechanism <strong>of</strong> fertilization is still<br />
unknown, but our current model suggests that sperm<br />
elevate phosphatidic acid (PA) and that this lipid<br />
binds and activates Src. This would lead to the<br />
release <strong>of</strong> intracellular calcium stores in the egg and<br />
subsequent fertilization events. Using PIP strips, we<br />
were able to show that Xenopus Src bound with a<br />
relatively high specificity, but now we want to<br />
estimate the dissociation constant (Kd) <strong>of</strong> Src and PA<br />
along with a control anionic lipid. The preferred<br />
method is the vesicle sedimentation assay where Src<br />
protein binding to unilamellar vesicles with PC, PC<br />
plus PA or PC with a control anionic lipid is quantified<br />
at different protein concentrations. A paper (Sigal et<br />
al., 1994) did not examine PA binding but suggests<br />
that six basic residues within the amino-terminal<br />
sequence <strong>of</strong> Src is important. We make these lipid<br />
vesicles using the Avanti Extruder, and record protein<br />
with the CBQCA Protein Quantification Kit from<br />
Molecular Probes. The protein quantification kit<br />
utilizes the ATTO-TAG CBQCA reagent that, in the<br />
presence <strong>of</strong> cyanide, reacts with primary amines to<br />
form fluorescent derivatives, which are analyzed<br />
using a fluorometer.<br />
20 <strong>2009</strong> Research and Creative Activities Symposium
Undergraduate Students<br />
Labor Supply Near Subsistence<br />
Income Levels<br />
Tiffany Heimbuch-Maybee, Economics, DC -<br />
College <strong>of</strong> Liberal Arts and Sciences<br />
Faculty Sponsor: Dr. Steven Beckman, DC -<br />
College <strong>of</strong> Liberal Arts and Sciences<br />
Activity Type: Undergraduate Research<br />
Building upon an argument for homo economicus<br />
(rational man) using dictator games and monopoly<br />
theory, we investigated monopsony in subsistence<br />
labor markets. The constraint <strong>of</strong> time and the<br />
universal necessity <strong>of</strong> purchasing shelter, clothing,<br />
food and medicine make a certain amount <strong>of</strong> income<br />
essential to survive. If wages fall near this<br />
subsistence level, it is necessary to devote all<br />
available time to paid labor, in order to simply<br />
survive. This simple logic implies perverse incentives<br />
- more work at lower pay - and <strong>of</strong>fers a tool for the<br />
unscrupulous to exert control. Apart from explaining<br />
the logic and method <strong>of</strong> child labor or the global<br />
trafficking <strong>of</strong> women in sex trade, this simple idea<br />
explains why sometimes workers in poor countries<br />
are perceived as irrational. The poor may refuse to<br />
work more as wages rise, not because they are lazy<br />
or stupid, but because leisure is a prized commodity<br />
once it is affordable. The primary outcomes <strong>of</strong> this<br />
research are a simpler and more general theory <strong>of</strong><br />
child labor, a theory <strong>of</strong> sweat-shops where workers<br />
are indeed exploited and a theory that explains why<br />
welfare recipients respond to the potential to earn<br />
more by working less.<br />
Synthesis <strong>of</strong> GABA Analogues<br />
Molly Hickey, Non-degree, DC - College <strong>of</strong> Liberal<br />
Arts and Sciences<br />
Faculty Sponsor: Dr. J. Hoyt Meyer, DC - College<br />
<strong>of</strong> Liberal Arts and Sciences<br />
Activity Type: Undergraduate Research<br />
Neurotransmitters are chemical messengers, serving<br />
as the primary activators and inhibitors <strong>of</strong> the signal<br />
pathways in the Central Nervous System (CNS).<br />
Gama-aminobutyric acid (GABA) neurotransmitters<br />
are primarily inhibitory in the CNS. GABA is a<br />
molecule <strong>of</strong> interest due to the ability <strong>of</strong> the GABA<br />
receptor to bind with not only the biological GABA<br />
molecule, but other molecules with similar structures.<br />
Thus, the purpose <strong>of</strong> this research is to synthesize<br />
the GABA analogue, 4-amino-2-oxa-3-oxobicyclo[2.2.1]heptane-1-carboxylic<br />
acid, with a<br />
bicyclic conformation. This molecule also provides<br />
the possibility <strong>of</strong> creating a glutamate analogue with<br />
cleavage <strong>of</strong> the lactone. The conformationally<br />
constrained structure is designed to enable the<br />
molecule will bind with specificity to the target<br />
receptor site. Principal findings show a bicyclic<br />
analogue can be generated with an iodide in the<br />
place where a carboxylic acid will be installed.<br />
Pending further elaboration <strong>of</strong> the synthetic<br />
intermediates in hand, the synthetic route appears to<br />
promise positive results.<br />
<strong>2009</strong> Research and Creative Activities Symposium 21
Undergraduate Students<br />
Political Subversion in Sir Gawain<br />
and the Green Knight: The Welsh<br />
Social Imaginary and National<br />
Identity in the 14th Century<br />
Brittany Jones, English/Philosophy, DC - College <strong>of</strong><br />
Liberal Arts and Sciences<br />
Faculty Sponsor: Dr. Nancy Ciccone, DC - College<br />
<strong>of</strong> Liberal Arts and Sciences<br />
Activity Type: Undergraduate Research<br />
2008-<strong>2009</strong> UROP Award Winner<br />
This article examines the latent presence <strong>of</strong> a<br />
medieval Welsh social imaginary in the late medieval<br />
poem, Sir Gawain and the Green Knight. Readings <strong>of</strong><br />
this poem have consistently conflated the terms<br />
“British” and “English,” thus <strong>of</strong>fering what appears to<br />
be an English rendition <strong>of</strong> French courtly romance.<br />
Recent criticism has suggested that during the<br />
fourteenth century, the relationship between England<br />
and Wales can be described as post-colonial, and<br />
this article explores the significance <strong>of</strong> the political<br />
situation and the geography <strong>of</strong> the narrative within<br />
this post-colonial context. Engaging the poem with<br />
the awareness <strong>of</strong> the Welsh social context and a<br />
phenomenological understanding <strong>of</strong> social imaginary,<br />
this article traces the emergence <strong>of</strong> a Welsh national<br />
identity, criticizing the English court.<br />
Variation in Maternal and Child<br />
Nutrition Across Cultures in<br />
Mondaña, Ecuador<br />
Racheal Keller, Biology, DC - College <strong>of</strong> Liberal Arts<br />
and Sciences<br />
Faculty Sponsor: Dr. Sharry Erzinger, DC - College<br />
<strong>of</strong> Liberal Arts and Sciences<br />
Activity Type: Undergraduate Research<br />
Variation in Maternal and Child Nutrition Across<br />
Cultures in Mondaña, Ecuador. Racheal Keller A.<br />
<strong>University</strong> <strong>of</strong> <strong>Colorado</strong> <strong>Denver</strong>, <strong>Denver</strong>, CO A three<br />
and half week exploration <strong>of</strong> diet and nutrition among<br />
Ecuadorian mothers and their infants, revealed<br />
interesting variation among ethnically and<br />
linguistically different mothers who had just given<br />
birth in the community <strong>of</strong> Mondaña. In order to<br />
determine the components <strong>of</strong> their diets, we<br />
interviewed seven women. Using interpreters and a<br />
community informant, we asked open-ended<br />
questions regarding the foods they ate before<br />
becoming pregnant, during pregnancy, and directly<br />
following pregnancy. We transcribed the data to<br />
compare changes and analyze similarities. The<br />
women were from varied backgrounds including: age,<br />
size <strong>of</strong> family, social and financial capital, locality,<br />
and culture. In addition to this, a governmental<br />
program had recently been implemented to provide<br />
nutritional supplements to mothers during their<br />
pregnancy through breastfeeding and into the child’s<br />
first five years. We hypothesized that some mothers<br />
would be using the supplement but due to tradition<br />
and the fact that many women do not attend the clinic<br />
for prenatal care not all women would have access to<br />
the supplements. Analysis <strong>of</strong> the backgrounds <strong>of</strong><br />
participating mothers established distinctive patterns<br />
<strong>of</strong> behavior between mothers who spoke Kichwa, a<br />
specific dialect <strong>of</strong> indigenous people in the Amazon<br />
basin, and mothers who spoke Spanish. Analysis <strong>of</strong><br />
our field notes established some commonalities.<br />
Younger mothers <strong>of</strong> 17 to 20 years old showed a<br />
continuous use <strong>of</strong> supplements provided by the<br />
Ecuadorian government. They also did not participate<br />
in many <strong>of</strong> the traditions <strong>of</strong> the older mothers, such<br />
as the drinking chicha, a fermented drink made from<br />
yuca. In these two different groups, many more<br />
women participated in the governmental programs<br />
than we originally thought and there was an evident<br />
change in tradition noted through younger mothers in<br />
both groups. This poster presentation will provide<br />
additional findings from the Field Study experience in<br />
the Ecuadorian Amazon basin.<br />
22 <strong>2009</strong> Research and Creative Activities Symposium
Undergraduate Students<br />
N-Amino Acid (Ester-<br />
Protected) Thiophosphoramidates,<br />
A Step in the<br />
Preparation <strong>of</strong> Pseudotripeptides:<br />
A research Prototype for<br />
Undergraduate Chemistry Labs<br />
Jason Lathrop, Chemistry, DC - College <strong>of</strong> Liberal<br />
Arts and Sciences<br />
Jonathan Cook, Chemistry/ Biology, DC - College <strong>of</strong><br />
Liberal Arts and Sciences<br />
Susan Schelble, Chemistry, DC - College <strong>of</strong> Liberal<br />
Arts and Sciences<br />
Faculty Sponsor: Dr. Doug Dyckes, DC - College <strong>of</strong><br />
Liberal Arts and Sciences<br />
Activity Type: Undergraduate Research<br />
Thiophosphoramidates are sulfur-containing<br />
phosphate derivatives and can easily be generated<br />
by reacting thiophosphates with amines. These<br />
compounds can be valuable intermediates in the<br />
formation <strong>of</strong> mixed imides. This study investigated<br />
the synthesis <strong>of</strong> thiophosphoryl carbonyl mixed<br />
imides with amino acid moieties, which upon<br />
rearrangement, form phosphothiocarbonyl mixed<br />
imides. This method <strong>of</strong> preparation does not requires<br />
excessively harsh reagents and the molecules can be<br />
fully characterized using IR, H-1 NMR, and P-31<br />
NMR spectroscopy. Phosphorylthiocarbonyl mixed<br />
imides have been historically important in agriculture<br />
as fertilizers and pesticides, but if the imides are<br />
amino acid derivatives, they may also have<br />
biomedical applications. These synthetic amino acids<br />
can be further reacted, and then selectively cleaved<br />
to afford an internally placed thioamide within a short<br />
pseudopeptide that may have antiviral properties.<br />
This study <strong>of</strong> the preparation <strong>of</strong> novel synthons for<br />
pseudotripeptides affords undergraduate research<br />
students the chance to make novel compounds,<br />
study the mechanism <strong>of</strong> their formation, and<br />
characterize them structurally while learning<br />
advanced synthetic techniques.<br />
Binding <strong>of</strong> Alcohol to Odorant<br />
Binding Protein<br />
Jonathan Levy, chemistry, DC - College <strong>of</strong> Liberal<br />
Arts and Sciences<br />
Lauren Ader, Biology, DC - College <strong>of</strong> Liberal Arts<br />
and Sciences<br />
Faculty Sponsor: Dr. Hai Lin, DC - College <strong>of</strong><br />
Liberal Arts and Sciences<br />
Activity Type: Undergraduate Research<br />
2008-<strong>2009</strong> UROP Award Winner<br />
The physiological effects <strong>of</strong> alcohol all begin with the<br />
binding <strong>of</strong> alcohols to a number <strong>of</strong> neuronal proteins.<br />
This research utilized quantum mechanical<br />
calculations to model the interaction between<br />
alcohols and a non-enzyme protein receptor LUSH.<br />
Our calculations were performed at the semiempirical<br />
level <strong>of</strong> theory employing a number <strong>of</strong><br />
cluster models <strong>of</strong> more than 150 atoms. Both gasphase<br />
and continuum solvation model calculations<br />
were carried out. Our study confirmed that the<br />
hydrogen-bonding network at the binding site is<br />
important in anchoring the alcohol via its hydroxyl<br />
group, and that the hydrophobic pocket stabilizes the<br />
alkyl chain <strong>of</strong> the alcohol. However, the relative<br />
binding affinities <strong>of</strong> ethanol, propanol, and butanol<br />
predicted by the gas-phase model disagreed with the<br />
experimental data; adding solvation effects alleviated<br />
but did not solve the problem. More in-depth<br />
investigation using high-level <strong>of</strong> theory is highly<br />
desirable.<br />
<strong>2009</strong> Research and Creative Activities Symposium 23
Undergraduate Students<br />
Intersimple Sequence Repeat<br />
(ISSR) Markers and Their Potential<br />
for Evolutionary Research on the<br />
Rare <strong>Colorado</strong> Endemic,<br />
Penstemon degeneri<br />
Mary McAllister, Biology, DC - College <strong>of</strong> Liberal<br />
Arts and Sciences<br />
Tabitha Ting, Biology, DC - College <strong>of</strong> Liberal Arts<br />
and Sciences<br />
Faculty Sponsor: Dr. Leo Bruederle, DC - College<br />
<strong>of</strong> Liberal Arts and Sciences<br />
Activity Type: Undergraduate Research<br />
Penstemon is the largest genus <strong>of</strong> plants restricted in<br />
distribution to North America, with 275 closely related<br />
species; this genus is particularly well-represented in<br />
the west, including <strong>Colorado</strong>. However, relatively little<br />
is known about evolutionary diversification in<br />
Penstemon. The purpose <strong>of</strong> this investigation was to<br />
determine the usefulness <strong>of</strong> Intersimple Sequence<br />
Repeats (ISSRs) as molecular markers for<br />
determining evolutionary relationships among<br />
species within this important genus. Specifically, we<br />
examined genetic differentiation between the rare<br />
<strong>Colorado</strong> endemic, Penstemon degeneri, and its<br />
more common sister species Penstemon griffinii.<br />
ISSR markers are genetically dominant molecular<br />
markers formed through single primer polymerase<br />
chain reactions (PCR) using di- or trinucleotide<br />
repeat sequences. ISSRs are present throughout the<br />
genome and, therefore, amplification probability is<br />
high between adjacent anchoring regions. This<br />
technique generates a large amount <strong>of</strong> genetic data<br />
that have proven useful previously for evolutionary<br />
research on Penstemon. Here, we present ISSR data<br />
for two primers that reveal no statistically significant<br />
difference between P. degeneri and P.griffinii. As<br />
such, our data suggest that the two morphological<br />
species have evolved recently.<br />
Image Processing Diagnostics:<br />
Emphysema<br />
Alexander McKenzie, Physics, Applied<br />
Mathematics, DC - College <strong>of</strong> Liberal Arts and<br />
Sciences<br />
Faculty Sponsor: Dr. Alberto Sadun, DC - College<br />
<strong>of</strong> Liberal Arts and Sciences<br />
Activity Type: Undergraduate Research<br />
Computerized tomography (CT) scans are currently<br />
being used to determine if patients have emphysema,<br />
as well as the severity <strong>of</strong> the disease. Currently the<br />
CT scan can detect emphysema sooner than<br />
traditional x-rays, but other tests are required to<br />
measure more accurately the amount <strong>of</strong> affected<br />
lung. CT scan images show clearly if a patient has<br />
emphysema, but is unable, by visual scan alone, to<br />
quantify the degree <strong>of</strong> the disease, as it appears<br />
merely as dark spots on the lung. Our goal is to<br />
create a s<strong>of</strong>tware plug-in that will interface with<br />
existing open source medical imaging s<strong>of</strong>tware, to<br />
automate the process <strong>of</strong> accurately diagnosing and<br />
determining emphysema severity levels in patients.<br />
This will be accomplished by performing a number <strong>of</strong><br />
statistical calculations on several <strong>of</strong> the CT scan<br />
images <strong>of</strong> several patients (representing a wide<br />
range <strong>of</strong> severity <strong>of</strong> the disease), including looking at<br />
the deviation from a normal distribution curve to<br />
determine skewness, a commonly used statistical<br />
parameter.<br />
24 <strong>2009</strong> Research and Creative Activities Symposium
Undergraduate Students<br />
Adult Attachment Styles and<br />
Coping Strategies in College<br />
Students<br />
Jennifer Metzler, Psychology, DC - College <strong>of</strong><br />
Liberal Arts and Sciences<br />
Faculty Sponsor: Dr. Eric Benotsch, DC - College<br />
<strong>of</strong> Liberal Arts and Sciences<br />
Activity Type: Undergraduate Research<br />
America has an alarmingly high divorce rate.<br />
Previous research has found associations between<br />
adult attachment styles and coping strategies. These<br />
may serve as important factors that lead to<br />
successful romantic relationships. Most previous<br />
studies examining the associations between adult<br />
attachment and coping have used a three-category<br />
model <strong>of</strong> attachment styles. More recent work<br />
suggests that a more complex four-category model <strong>of</strong><br />
adult attachment has greater explanatory utility. In<br />
the present study, adult attachment styles and coping<br />
strategies were assessed in 270 undergraduate<br />
students. Participants were assigned to one <strong>of</strong> four<br />
distinct attachment styles (secure, fearful,<br />
preoccupied, and dismissive). Five types <strong>of</strong> coping<br />
were assessed: problem-focused methods, seeking<br />
social support, blaming self, wishful thinking, and<br />
avoidance. Secure attachment style was the most<br />
prominent with 45.6%, followed by 25.5% fearful,<br />
18.9% preoccupied, and 10% dismissive. Individuals<br />
with a secure attachment style used significantly<br />
more adaptive coping strategies such as problemfocused<br />
coping or seeking social support (ps
Undergraduate Students<br />
Heat Sinking in a Helium-3 Cryostat<br />
for SQUID Susceptometry<br />
Katy O'Leary, EE, DC - College <strong>of</strong> Engineering and<br />
Applied Science<br />
Faculty Sponsor: Dr. Martin Huber, DC - College <strong>of</strong><br />
Liberal Arts and Sciences<br />
Activity Type: Undergraduate Research<br />
Heat Sinking in a Helium-3 Cryostat for SQUID<br />
Susceptometry We have instrumented a helium-3<br />
cryostat for ultra-low-temperature measurements <strong>of</strong><br />
Superconducting Quantum Interference Device<br />
(SQUID) susceptometers. SQUID susceptometers<br />
are used to measure magnetic properties <strong>of</strong> nanoscle<br />
samples; their performance improves as temperature<br />
is reduced. The Helium-3 cryostat is operational<br />
between 4 K and 250 mK. A single low-temperature<br />
preamplifier (a SQUID Series Array Amplifier, <strong>of</strong><br />
SSAA) is installed on the stage with temperature<br />
between 1.2K and 4K during system check-out. The<br />
SSAA presently operates at a higher temperature<br />
than expected, and the cause <strong>of</strong> this excess<br />
temperature is being investigated. Progress in<br />
improving thermal contact and heat sinking will be<br />
reported, as well as new low-temperature noise<br />
measurements, if available.<br />
Correlation between Responsibility<br />
and Stigma in Patients with Lung<br />
Cancer, Type II Diabetes, and<br />
Cardiovascular Disease<br />
Christina Pavelko, Psychology/Biology, DC -<br />
College <strong>of</strong> Liberal Arts and Sciences<br />
Faculty Sponsor: Dr. Joy Berrenberg, DC - College<br />
<strong>of</strong> Liberal Arts and Sciences<br />
Activity Type: Undergraduate Research<br />
Pervious research has shown a correlation between<br />
responsibility and stigma in patients with HIV and<br />
lung cancer such that patients who are seen as<br />
responsible for their illness are more stigmatized by<br />
society. The present study examines the effects <strong>of</strong><br />
responsibility on stigma in cancer as well as diabetes<br />
and cardiovascular disease. Using a 3x2<br />
experimental design in which illness type and<br />
responsibility were manipulated, college students<br />
(n=161) who participated were randomly assigned to<br />
read a short narrative <strong>of</strong> a hypothetical patient and<br />
then provide their reactions to that patient on four<br />
variables: responsibility for the illness, expected<br />
degree <strong>of</strong> social support, personality characteristics<br />
<strong>of</strong> the patient, and personal reactions to the patient.<br />
Significant effects and interactions reveal that higher<br />
responsibility illnesses are associated with more<br />
negative reactions and greater stigma.<br />
26 <strong>2009</strong> Research and Creative Activities Symposium
Undergraduate Students<br />
Bacterial Gene Expression in<br />
Response to Toxic Metal Exposure<br />
Jason Persichetti, Biology, DC - College <strong>of</strong> Liberal<br />
Arts and Sciences<br />
Faculty Sponsor: Dr. Lisa Johansen, DC - College<br />
<strong>of</strong> Liberal Arts and Sciences<br />
Activity Type: Undergraduate Research<br />
Differential gene expression was studied in the<br />
bacterium Pseudomonas sp. S8A isolated from soil<br />
contaminated with heavy metals from mining. This<br />
bacterium is <strong>of</strong> interest due to its resistance to highly<br />
toxic levels <strong>of</strong> cadmium. The molecular technique <strong>of</strong><br />
cDNA-amplified fragment length polymorphism<br />
(cDNA-AFLP) analysis was used to identify genes<br />
that were up and down regulated in response to<br />
cadmium exposure. S8A was grown in media<br />
amended with 0, 10, and 50 ppm <strong>of</strong> cadmium.<br />
Exposure to cadmium caused an initial loss <strong>of</strong><br />
viability in the cultures, followed by exponential<br />
growth to a maximum concentration <strong>of</strong> 108 CFU/mL,<br />
matching the upper limit <strong>of</strong> S8A’s growth in the same<br />
medium when not exposed to cadmium. The growth<br />
<strong>of</strong> S8A resulted in cadmium precipitation from the<br />
growth medium. RNA isolated from samples collected<br />
during the early exponential growth phase was used<br />
with the cDNA-AFLP technique to identify<br />
differentially expressed genes. These genes were<br />
identified based on available genomic data. Two up<br />
regulated genes were highly similar to membrane<br />
transport genes. Based on differential gene<br />
expression, this study provides valuable metabolic<br />
data regarding cadmium resistance, useful in<br />
understanding microbial responses involved in<br />
chemical stress and detoxification.<br />
If I could, I would: Ethics and<br />
Intervening in the Lives <strong>of</strong> Addicts<br />
Sergei Prokopov, Econ/Phil, DC - College <strong>of</strong> Liberal<br />
Arts and Sciences<br />
Rachael Boice, Phil/Phyc, DC - College <strong>of</strong> Liberal<br />
Arts and Sciences<br />
David Ragsdale, English/Phil, DC - College <strong>of</strong><br />
Liberal Arts and Sciences<br />
John Fox, Philosophy, DC - College <strong>of</strong> Liberal Arts<br />
and Sciences<br />
Faculty Sponsor: Dr. Candice Shelby, DC - College<br />
<strong>of</strong> Liberal Arts and Sciences<br />
Activity Type: Undergraduate Research<br />
2008-<strong>2009</strong> UROP Award Winner<br />
The classical ethical theories maintain that agents<br />
are free and, therefore, accountable for their actions.<br />
Those theories prescribe different techniques on how<br />
best to address the needs <strong>of</strong> addicts. Aristotle<br />
thought the passions were a subordinate domain <strong>of</strong><br />
an agent, who, when operating well, was directed by<br />
reason. Kant assumed that it is possible to<br />
disconnect oneself from the passions, so that issues<br />
such as addiction could be addressed morally.<br />
Utilitarians continued to address such problems by<br />
presuming that an individual could make rational<br />
decisions about what was in the interest <strong>of</strong> the<br />
happiness <strong>of</strong> everybody involved. All <strong>of</strong> these<br />
theories were developed prior to the recent<br />
technological advances that have revolutionized<br />
neuroscience. The research on human brain reveals<br />
that not only addicts but average people are not as<br />
rational as previously thought. Hard sciences do not<br />
explain addicts’ behavior; however, valuable scientific<br />
information can be used in refining major ethical<br />
tenets. Malformations in the white matter, disruptive<br />
flow <strong>of</strong> dopamine from one neuron to another and<br />
other anomalies in the human brain pose intricate<br />
questions to ethicists. It turns out we can no longer<br />
rely on reason itself while adjudicating addicts’<br />
behavior, not to mention our intervention into their<br />
predicaments.<br />
<strong>2009</strong> Research and Creative Activities Symposium 27
Undergraduate Students<br />
Comparison between Static and<br />
Dynamic Scheduling Strategies for<br />
Linear Algebra DAG Based<br />
Multicore Algorithms, Extension to<br />
Parallel Distributed Scheduling<br />
Lee Rosenberg, Mathematics, DC - College <strong>of</strong><br />
Liberal Arts and Sciences<br />
Faculty Sponsor: Dr. Julien Langou, DC - College<br />
<strong>of</strong> Liberal Arts and Sciences<br />
Activity Type: Undergraduate Research<br />
In order to provide fine granularity for linear algebra<br />
operations, a new generation <strong>of</strong> algorithms based on<br />
DAG has been created. Preliminary results are<br />
promising. The scheduling strategies used in these<br />
new algorithms impact the overall performance and<br />
therefore deserve to be studied. In this<br />
undergraduate research work, we have developed a<br />
simulator to study various dynamic and static<br />
strategies for DAG scheduling.<br />
Social Network Surveys in Math<br />
and Science Education<br />
Adam Ruff, Math education, DC - College <strong>of</strong> Liberal<br />
Arts and Sciences<br />
Mike Garkie, IPTE, DC - School <strong>of</strong> Education and<br />
Human Development<br />
Faculty Sponsor: Dr. Diana White, DC - College <strong>of</strong><br />
Liberal Arts and Sciences<br />
Activity Type: Undergraduate Research<br />
Social network surveys are commonly used in<br />
educational research to study social networks <strong>of</strong><br />
various types. In this talk, we discuss our use <strong>of</strong><br />
social network surveys to study who teachers in a<br />
given school go to for advice on teaching math and<br />
science. Analyzing the data requires mathematical<br />
concepts from graph theory and statistics. We<br />
provide an overview <strong>of</strong> the basic concepts needed,<br />
assuming no prior knowledge <strong>of</strong> the area.<br />
28 <strong>2009</strong> Research and Creative Activities Symposium
Undergraduate Students<br />
The Effects <strong>of</strong> Alcohol on Voice<br />
Jay Schamberg, Music Industry Studies, DC -<br />
College <strong>of</strong> Arts and Media<br />
Faculty Sponsor: Mr. Rich Sanders, DC - College<br />
<strong>of</strong> Arts and Media<br />
Activity Type: Undergraduate Research<br />
The voice fundamental and formants were<br />
researched when subjects consume a regimented<br />
amount <strong>of</strong> alcohol over a two hour period. The initial<br />
averages <strong>of</strong> the frequencies <strong>of</strong> voices from subjects<br />
were taken and analyzed versus their alcohol<br />
impaired vocal frequencies every 15 minutes.<br />
Additionally, the speech patterns were analyzed<br />
when a truth versus an inaccuracy was spoken, and<br />
data is gleaned about the possible difference or lack<br />
there<strong>of</strong>.<br />
Pollen-ovule Ratios as an Indicator<br />
<strong>of</strong> Breeding System in Penstemon<br />
degeneri, a Rare <strong>Colorado</strong> Endemic<br />
Angela Schultz, Biology, DC - College <strong>of</strong> Liberal Arts<br />
and Sciences<br />
Carol English, Biology, DC – College <strong>of</strong> Liberal Arts<br />
and Sciences<br />
Faculty Sponsor: Dr. Leo P. Bruederle, DC -<br />
College <strong>of</strong> Liberal Arts and Sciences<br />
Activity Type: Undergraduate Research<br />
2008-<strong>2009</strong> UROP Award Winner<br />
Pollen-ovule ratios are an important aspect <strong>of</strong> the<br />
pollination biology <strong>of</strong> a species, and can provide<br />
insight into breeding system. A relationship exists<br />
between the number <strong>of</strong> ovules that a flower produces<br />
relative to the amount <strong>of</strong> pollen production. For<br />
example, xenogamous (out-crossing) species have<br />
been shown to produce a large volume <strong>of</strong> pollen<br />
relative to the number <strong>of</strong> ovules – resulting in a high<br />
pollen-ovule ratio – that better ensures pollination<br />
and seed set. Prior evidence from research on the<br />
reproductive biology <strong>of</strong> Penstemon degeneri<br />
Crosswhite (Plantaginaceae), a rare <strong>Colorado</strong><br />
endemic, suggests that this species has a mixed<br />
mating system involving out-crossing by a suite <strong>of</strong><br />
megachilid bees, apid bees, and vespid wasps, as<br />
well as self-pollination. Herein, pollen-ovule ratios are<br />
used to further test the hypothesis <strong>of</strong> facultative<br />
xenogamy in this species. Pollen and ovule counts<br />
(or estimates) were obtained from 40 individuals<br />
representing three populations across the elevational<br />
range for this species. Ovule counts ranged from<br />
64.1 (± 17.1) – 102.9 (±19.8), while pollen-ovule<br />
ratios ranged from 963.3 (± 217.5) – 1291.5 (± 411.7)<br />
pollen grains/ovule. These data support our previous<br />
results that P. degeneri is facultatively xenogamous –<br />
predominately outcrossing, while still capable <strong>of</strong> selfpollination.<br />
<strong>2009</strong> Research and Creative Activities Symposium 29
Undergraduate Students<br />
Expression patterns <strong>of</strong> male<br />
germline specific promoters in<br />
Arabidopsis thaliana<br />
(Brassicaceae)<br />
Sara Sirivanchai, Biology, DC - College <strong>of</strong> Liberal<br />
Arts and Sciences<br />
Faculty Sponsor: Dr. Michele Engel, DC - College<br />
<strong>of</strong> Liberal Arts and Sciences<br />
Activity Type: Undergraduate Research<br />
2008-<strong>2009</strong> UROP Award Winner<br />
Our lab is interested in understanding the male<br />
gametophyte contribution to fertilization. Recently a<br />
nine nucleotide regulatory motif was identified in<br />
several lily and Arabidopsis thaliana male<br />
gametophyte specific genes (Haerizadeh et al. 2006).<br />
We hypothesized that other male gametophyte<br />
specific genes would also contain this motif. We used<br />
bioinformatics and publicly available microarray data<br />
to identify a set <strong>of</strong> A. thaliana gene promoters, which<br />
contain the motif and that are not known to be<br />
expressed in vegetative tissues. To determine the<br />
expression patterns <strong>of</strong> these genes, we cloned the<br />
promoter regions into a plant transformation vector<br />
upstream <strong>of</strong> two reporter genes eGFP and GUS. The<br />
vector also allows selection <strong>of</strong> the transformed plants<br />
with an herbicide. The vectors were transformed into<br />
A. thaliana and microscopy was used to visualize the<br />
expression patterns <strong>of</strong> these two reporter genes in<br />
several tissue types. No consistent patterns <strong>of</strong><br />
expression were seen in the male germline specific<br />
tissue; however, some interesting patterns <strong>of</strong><br />
expression were observed including pollen vegetative<br />
cell expression, root expression, and meristems<br />
expression in leaves and cotyledons.<br />
Investigation <strong>of</strong> Peptide Derivatives<br />
<strong>of</strong> 1-carboxyl-4-amino-2-aza-3-oxo-<br />
Bicyclo [2.2.2] Octane A Rigid<br />
Bicyclic Dipeptide Analog<br />
Derek Strasser, chemistry, DC - College <strong>of</strong> Liberal<br />
Arts and Sciences<br />
Faculty Sponsors: Dr. Rentsenmyadag Dashzeveg<br />
Post Doctorial co-advisor<br />
Dr. Douglas Dyckes, DC - College <strong>of</strong> Liberal Arts and<br />
Sciences<br />
Activity Type: Undergraduate Research<br />
The purpose <strong>of</strong> this research is to investigate<br />
synthetic routes for dipeptide and tripeptide<br />
derivatives <strong>of</strong> 1-carboxyl-4-amino-2-aza-3-oxobicyclo<br />
[2.2.2] octane and to characterize the<br />
resulting peptides. Derivatives <strong>of</strong> 1-carboxyl-4-amino-<br />
2-aza-3-oxo-bicyclo [2.2.2] octane are interesting in<br />
pharmacology and drug design because this core is a<br />
rigid structure that can direct molecular conformation,<br />
an important property <strong>of</strong> biologically active<br />
compounds. The title molecule also has two polar<br />
groups on one <strong>of</strong> the bridges <strong>of</strong> the bicyclic core. The<br />
two polar groups will affect how the oligopeptide<br />
derivatives will interact with each other and other<br />
compounds. Our current synthetic strategy consists<br />
<strong>of</strong> three key steps. The first being the protection <strong>of</strong><br />
the amine group with 9-fluorenylmethyl chlor<strong>of</strong>ormate<br />
(Fmoc). This is an excellent protecting group in that it<br />
is acid stable and easily removed in a mildly basic<br />
environment. The second step is to activate the<br />
carboxyl group by converting it to a pentafluorophenyl<br />
ester. This type <strong>of</strong> ester is highly reactive, therefore<br />
the final step creating the peptide bond can be<br />
accomplished under mild conditions and is quick.<br />
Initial results have indicated that the N-protected<br />
active ester successfully coupled to phenylalanine<br />
ethyl ester, a bulky amino acid derivative. This<br />
success is being built upon with attempts to further<br />
extend the dipeptide.<br />
30 <strong>2009</strong> Research and Creative Activities Symposium
Undergraduate Students<br />
Mutating TCRzeta to Study SLAPdependent<br />
Ubiquitination<br />
Matthew Taussig, Biology, DC - College <strong>of</strong> Liberal<br />
Arts and Sciences<br />
Faculty Sponsor: Dr. Aimee Bernard, DC - College<br />
<strong>of</strong> Liberal Arts and Sciences<br />
Activity Type: Undergraduate Research<br />
Mutant forms <strong>of</strong> TCRζ were generated in order to<br />
determine which residues <strong>of</strong> the zeta chain <strong>of</strong> the T-<br />
cell receptor (TCRζ) are ubiquitinated by Src-like<br />
adapter protein (SLAP) in combination with c-Cbl (an<br />
E3 ubiquitin ligase). The mutants will aid in the<br />
investigation <strong>of</strong> how SLAP-dependent ubiquitination<br />
<strong>of</strong> TCRζ affects internalization, intracellular<br />
trafficking, and degradation <strong>of</strong> the TCR complex.<br />
Using a plasmid containing the TCRζ gene and the<br />
technique <strong>of</strong> site directed mutagenesis, the<br />
intracellular lysines were mutated to arginines, a<br />
chemically similar amino acid to which ubiquitin<br />
cannot bind. There are nine total lysines in the<br />
intracellular domain <strong>of</strong> TCRζ, and nine mutant forms<br />
<strong>of</strong> TCRζ were generated. Cell lines that stably<br />
express our mutant forms <strong>of</strong> TCRζ could then be<br />
established enabling the study <strong>of</strong> TCR internalization<br />
and trafficking in the presence or absence <strong>of</strong> SLAP<br />
and c-Cbl. This project aims to increase our<br />
understanding T-cell signaling pathways and the<br />
mechanisms that control T cell development and<br />
function.<br />
Path <strong>of</strong> Valor<br />
Sasa Teodosijev, Film, DC - College <strong>of</strong> Arts and<br />
Media<br />
Benjamin Martinez, Film, DC - College <strong>of</strong> Arts and<br />
Media<br />
Tim Dixon, Music, DC - College <strong>of</strong> Arts and Media<br />
Faculty Sponsor: Mr. Hans Rosenwinkel, DC -<br />
College <strong>of</strong> Arts and Media<br />
Activity Type: Undergraduate Research<br />
2008-<strong>2009</strong> UROP Award Winner<br />
Path Of Valor: A real hero in celebrity obsessed<br />
culture Sasa Teodosijev, Film, College <strong>of</strong> Arts and<br />
Media Faculty mentor: Hans Rosenwinkel, Film,<br />
College <strong>of</strong> Arts And Media Activity Type:<br />
Undergraduate Research The purpose <strong>of</strong> this UROP<br />
project is to research and film a short documentary<br />
covering certain stories from the Korean War.<br />
Because this period in history was sandwiched<br />
between WWII and Vietnam, it is <strong>of</strong>ten referred to as<br />
“the Forgotten War.” We wish to show, through the<br />
camera, one story that needs to be told. In this day<br />
and age, there are many definitions <strong>of</strong> valor.<br />
Ambrosio Guillen was born, the son <strong>of</strong> migrant<br />
workers, in La Junta, <strong>Colorado</strong>. He enlisted into the<br />
armed services at the age <strong>of</strong> 17, and quickly rose to<br />
the rank <strong>of</strong> staff sergeant in the U.S. Marine Corps. In<br />
July <strong>of</strong> 1953, he led a platoon against two battalions<br />
<strong>of</strong> Red Chinese soldiers near the town <strong>of</strong> Songuchon,<br />
Korea. He succeeded in repelling the attacks, but<br />
was mortally wounded in the process. He was<br />
posthumously awarded the Medal <strong>of</strong> Honor for his<br />
courage under fire. Our research is designed, not just<br />
to tell Ambrosio’s story, but to examine the nature <strong>of</strong><br />
heroism. In this day and age, we are a celebrityobsessed<br />
society. The names on the tips <strong>of</strong> our<br />
tongues are football stars and American Idol<br />
contestants. This project looks to explore why our<br />
modern society has become apathetic to individuals<br />
that have given their lives for country.<br />
<strong>2009</strong> Research and Creative Activities Symposium 31
Undergraduate Students<br />
Varicella Zoster Virus DNA Persist<br />
in Saliva after Herpes Zoster and<br />
Post-Herpetic Neuralgia<br />
Igor Traktinksiy, Biology, DC - College <strong>of</strong> Liberal<br />
Arts and Sciences<br />
Faculty Sponsor: Dr. Aimee Bernard, DC - College<br />
<strong>of</strong> Liberal Arts and Sciences<br />
Activity Type: Undergraduate Research<br />
Varicella Zoster Virus (VZV) is a human neurotropic<br />
herpesvirus that typically causes childhood varicella<br />
(chickenpox), goes latent in neurons <strong>of</strong> multiple<br />
cranial, sensory and autonomic ganglia. Decades<br />
later, the virus can reactivate to cause zoster<br />
(shingles), a painful skin rash involving 1-3<br />
dermatomes innervated by ganglia that had harbored<br />
latent virus. VZV reactivation is associated with<br />
impaired cellular immunity especially in the elderly<br />
(age >60 yrs.), but can also be seen in individuals<br />
experiencing trauma, severe stress, or depression.<br />
Approximately 40% <strong>of</strong> elderly individuals with zoster<br />
will proceed to post-herpetic neuralgia (PHN) defined<br />
as pain <strong>of</strong> zoster continuing >3 months following<br />
resolution <strong>of</strong> zoster rash. Our hypothesis is that PHN<br />
is associated with persistent VZV replication in the<br />
ganglia. To test this hypothesis we searched for VZV<br />
DNA in saliva via qPCR. Control subjects included<br />
elderly individuals with zoster and no PHN along with<br />
elderly individuals without zoster. Our results indicate<br />
that all elderly subjects who had zoster shed VZV<br />
DNA independent <strong>of</strong> PHN. Thus, we conclude that<br />
zoster, as well as PHN, is associated with persistent<br />
VZV replication in the ganglia.<br />
Daily-Round <strong>of</strong> Activity in Western<br />
Harvester Ant (Pogonomyrmex<br />
occidentalis) Colonies<br />
Jason Truong, Biology, DC - College <strong>of</strong> Liberal Arts<br />
and Sciences<br />
Faculty Sponsor: Dr. Michael Greene, DC - College<br />
<strong>of</strong> Liberal Arts and Sciences<br />
Activity Type: Undergraduate Research<br />
We conducted an observational experiment to<br />
quantify the daily round <strong>of</strong> worker activity in Western<br />
Harvester Ant (Pogonomyrmex occidentalis)<br />
colonies. The daily round is the pattern <strong>of</strong> worker ant<br />
activity over time <strong>of</strong> day. Our aim was to measure<br />
relationships between different tasks performed on<br />
colony nest mounds. We measured the following<br />
tasks: patrolling, nest maintenance, midden work,<br />
foraging, and convening. The study was performed at<br />
8 colonies at a field site in central <strong>Denver</strong>, <strong>Colorado</strong>.<br />
We counted numbers <strong>of</strong> ants performing tasks at 30<br />
minute time intervals beginning about when colony<br />
activity began outside <strong>of</strong> the nest entrance. We<br />
counted ants using cell counters from the same<br />
observation point, about 1 meter from the nest<br />
entrance, at each colony. We also periodically<br />
measured nest mound surface temperature using an<br />
infrared temperature gun. We show here that the<br />
daily round <strong>of</strong> P. occidentalis is similar to the daily<br />
round <strong>of</strong> its congener P. barbatus and that patrolling<br />
precedes foraging in the daily round.<br />
32 <strong>2009</strong> Research and Creative Activities Symposium
Undergraduate Students<br />
Sugar Pine (Pinus lambertiana)<br />
seed harvesting behavior <strong>of</strong> the<br />
Clark’s Nutcracker (Nucifraga<br />
columbiana) in Crater Lake<br />
National Park, Oregon<br />
Bradley Van Anderson, Biology, DC - College <strong>of</strong><br />
Liberal Arts and Sciences<br />
Taylor Turner, Biology, DC - College <strong>of</strong> Liberal Arts<br />
and Sciences<br />
Faculty Sponsor: Dr. Diana F. Tomback, DC -<br />
College <strong>of</strong> Liberal Arts and Sciences<br />
Activity Type: Undergraduate Research<br />
Clark’s Nutcrackers (Nucifraga columbiana) play a<br />
vital role in the seed dispersal <strong>of</strong> several pine<br />
species, including species that have either wingless<br />
or winged seeds. These birds harvest seeds directly<br />
from cones and transport the seeds within a<br />
sublingual pouch to cache sites, where the seeds are<br />
stored for consumption during the winter and spring.<br />
The birds fail to recover a portion <strong>of</strong> the cached<br />
seeds, and eventually some <strong>of</strong> remaining seeds<br />
germinate and produce seedlings. Prior to this study,<br />
it has not been clearly documented if and how Clark’s<br />
Nutcrackers collect seeds from sugar pines (PInus<br />
lambertiana). By directly observing nutcrackers in<br />
Crater Lake National Park, Oregon, we have been<br />
able to confirm that nutcrackers do harvest sugar<br />
pine seeds. Nutcrackers were observed collecting<br />
seeds directly from cones and filling their sublingual<br />
pouches, suggesting that the sugar pine seeds are<br />
later cached in another location. We also gathered<br />
data on behavior <strong>of</strong> the birds while collecting seeds,<br />
harvest rates, number <strong>of</strong> seeds taken per visit, and<br />
cone opening phenology. Thus, we conclude that<br />
Clark’s Nutcrackers play some role in the dispersal <strong>of</strong><br />
sugar pine seeds and those seeds are at least part <strong>of</strong><br />
the diet <strong>of</strong> the nutcrackers.<br />
Copper Nickel<br />
Anisetta Valdez, English, DC - College <strong>of</strong> Liberal<br />
Arts and Sciences<br />
Julia Houk, English, DC - College <strong>of</strong> Liberal Arts and<br />
Sciences<br />
Faculty Sponsor: Dr. Jake Adam York, DC -<br />
College <strong>of</strong> Liberal Arts and Sciences<br />
Activity Type: Undergraduate Creative Activity<br />
Copper Nickel is an innovative journal <strong>of</strong> art and<br />
literature, edited and produced through studentteacher<br />
collaboration, combining elements <strong>of</strong> national<br />
literary journals and traditional campus literary<br />
magazines.<br />
<strong>2009</strong> Research and Creative Activities Symposium 33
Undergraduate Students<br />
Bronchopulmonary Dysplasia:<br />
Mechanisms <strong>of</strong> Injury and Repair in<br />
an Experimental Model <strong>of</strong> BPD<br />
Deandra Walker, Biology, DC - College <strong>of</strong> Liberal<br />
Arts and Sciences<br />
Faculty Sponsor: Dr. Steven Abman , AMC - School<br />
<strong>of</strong> Medicine<br />
Activity Type: Undergraduate Research<br />
Bronchopulmonary dysplasia (BPD) is a chronic lung<br />
disease in premature infants. Despite marked<br />
improvements in survival <strong>of</strong> premature newborns,<br />
BPD remains a cause <strong>of</strong> long-lasting respiratory<br />
morbidity in those patients. BPD is characterized by<br />
decreased vascular development and alveolar<br />
simplification as a result <strong>of</strong> lung injury during critical<br />
periods <strong>of</strong> lung development. Mechanisms that cause<br />
abnormal lung development in BPD and interventions<br />
that aim to improve the outcome <strong>of</strong> BPD are poorly<br />
understood. Besides supportive care there is no<br />
effective remedy to preserve normal lung growth in<br />
premature infants with high risk <strong>of</strong> BPD. It has been<br />
demonstrated that intrauterine exposure to E. coli<br />
endotoxin in fetuses causes BPD-like lung structure<br />
in preterm sheep, including impaired development <strong>of</strong><br />
pulmonary blood vessels and disruption <strong>of</strong> the<br />
airspace formation. Examining the mechanisms <strong>of</strong><br />
impairment in alveolar and pulmonary vascular<br />
growth in chorioamnionitis induced BPD may provide<br />
insights into novel therapies for the preservation <strong>of</strong><br />
normal lung growth in preterm infants. My research<br />
with Dr. Jen-Ruey Tang aims to determine the<br />
independent and combined effects <strong>of</strong> antenatal<br />
endotoxin and postnatal hyperoxia on lung structure<br />
in neonatal rats, specifically whether combined<br />
exposures to both stimuli worsen lung structure.<br />
CAM Records<br />
Drew Wiltjer, MEIS, DC - College <strong>of</strong> Arts and Media<br />
Faculty Sponsor: Mr. Storm Gloor, DC - College <strong>of</strong><br />
Arts and Media<br />
Activity Type: Undergraduate Creative Activity<br />
Our independent, student-run record label maintains<br />
its mission <strong>of</strong> highlighting great <strong>Colorado</strong> music with<br />
the release <strong>of</strong> From These Words, this time featuring<br />
three premier artists currently based in the <strong>Denver</strong><br />
area. Since 1999, the students and pr<strong>of</strong>essors <strong>of</strong><br />
CAM Records, as part <strong>of</strong> the College <strong>of</strong> Arts and<br />
Media at the <strong>University</strong> <strong>of</strong> <strong>Colorado</strong>-<strong>Denver</strong>, have as<br />
a class created and released albums as a creative<br />
educational experience and in support <strong>of</strong> their<br />
community. As the music industry has transitioned,<br />
so has the course. But our goal <strong>of</strong> working together in<br />
a hands-on learning environment has remained the<br />
same. We’re very proud <strong>of</strong> our latest project, which<br />
represents the teamwork <strong>of</strong> many <strong>of</strong> our students.<br />
We're also proud <strong>of</strong> the Autumn Film, John Common,<br />
and the Dualistics, three uniquely talented artists<br />
whose music we know you’ll enjoy as you experience<br />
From These Words.<br />
34 <strong>2009</strong> Research and Creative Activities Symposium
Undergraduate Students<br />
Culture Change as an Innovation in<br />
the <strong>Denver</strong> Elder Housing<br />
Community: A Cost/Benefit<br />
Analysis<br />
Rebecca Wood, Sociology, DC - College <strong>of</strong> Liberal<br />
Arts and Sciences<br />
Faculty Sponsor: Dr. Karl Flaming, DC - College <strong>of</strong><br />
Liberal Arts and Sciences<br />
Activity Type: Undergraduate Research<br />
This project is a qualitative study <strong>of</strong> the Culture<br />
Change Movement in three senior housing facilities in<br />
the <strong>Denver</strong> area. The purpose <strong>of</strong> this study is to<br />
generate a cost/benefit analysis <strong>of</strong> the Culture<br />
Change Movement in order to determine the<br />
effectiveness <strong>of</strong> this approach. The results <strong>of</strong> this<br />
study will come from one-on- one field study<br />
interviews with administrative staff at each <strong>of</strong> the<br />
three sites. Each site will be representative <strong>of</strong> a<br />
different component found in the Dispersion <strong>of</strong><br />
Innovation Theory, namely: early adopters, the early<br />
and/or late majority, and the laggards. In addition, I<br />
will be interviewing a state surveyor from the<br />
<strong>Colorado</strong> Department <strong>of</strong> Public Health and<br />
Environment about regulatory standards and culture<br />
change compliance.<br />
<strong>2009</strong> Research and Creative Activities Symposium 35
Graduate Students<br />
The Relationship between<br />
Hydrocarbons and Aggression in<br />
T. caespitum<br />
Nathanael Bannon, Biology, DC - College <strong>of</strong> Liberal<br />
Arts and Sciences<br />
Faculty Sponsor: Dr. Michael Greene, DC -<br />
College <strong>of</strong> Liberal Arts and Sciences<br />
Activity Type: Graduate Research<br />
The Pavement Ant (Tetramorium caespitum) is a<br />
structural and an agricultural pest notorious for<br />
aggression towards conspecific non-nestmate and<br />
heterospecific ants. Nestmate and species<br />
recognition in T. caespitum is informed by cues<br />
present in cuticular hydrocarbons (Sano and<br />
Greene, unpublished data). Using multivariate linear<br />
regression, I found that molecule 7 (t-value 2.001, p-<br />
value 0.06265), molecule 8 (t-value -1.788, p-value<br />
0.09265), and molecule 16 (t-value -2.542, p-value<br />
0.02177) are the best predictors <strong>of</strong> aggression. The<br />
p-value for our model was 0.4182 and multiple R-<br />
squared was 0.5262. The same data was then<br />
analyzed using univariate linear regression. These<br />
results indicate that no single molecule is a good<br />
predictor <strong>of</strong> aggression. We then examined the<br />
relationship between whole structural classes and<br />
aggression. In order to determine the relative<br />
significance <strong>of</strong> each <strong>of</strong> the structural classes, data<br />
was analyzed using the Tukey-Kramer method. The<br />
results indicate that all structural classes are equally<br />
important in nestmate recognition. N-alkanes had a<br />
mean aggression index <strong>of</strong> 4.4375, methyl-branched<br />
alkanes had a mean aggression index <strong>of</strong> 4.5625,<br />
and n-alkenes had a mean aggression index <strong>of</strong><br />
4.6250.<br />
The Relationship between<br />
Whitebark Pine Health, Cone<br />
Production, and Seed Dispersal by<br />
Clark’s Nutcrackers: What is the<br />
Potential for Natural<br />
Regeneration?<br />
Lauren Barringer, Biology, DC - College <strong>of</strong> Liberal<br />
Arts and Sciences<br />
Faculty Sponsor: Dr. Diana Tomback, DC -<br />
College <strong>of</strong> Liberal Arts and Sciences<br />
Activity Type: Graduate Research<br />
Whitebark pine (Pinus albicaulis) in the northern<br />
Rocky Mountains is declining as a result <strong>of</strong> infection<br />
by Cronartium ribicola, the invasive pathogen<br />
causing white pine blister rust, and also from<br />
mountain pine beetle (Dendroctonas ponderosae).<br />
Clark’s nutcracker (Nucifraga columbiana) is the<br />
primary seed disperser for whitebark pine. Previous<br />
work shows that Clark’s nutcrackers make fewer<br />
visits to damaged forests than to healthier forests<br />
when seeds are ripe. We tested predictions relating<br />
live stand basal area and cone production to the<br />
likelihood <strong>of</strong> nutcrackers making dispersal forays. In<br />
2008, we established 10 transects with two forest<br />
health subplots per transect in four national parks.<br />
Data from 2008 show whitebark pine in Glacier and<br />
Waterton Lakes National Parks to have higher blister<br />
rust infection (33% and 70%, respectively), whereas<br />
Yellowstone and Grand Teton National Parks had<br />
lower blister rust infection levels (
Dynamic Interaction: A<br />
Measurement Scale Development<br />
and Empirical Validation.<br />
Brandon Beemer, PhD Computer Science and<br />
Information Systems, DC - Business School<br />
Faculty Sponsor: Dr. Dawn G. Gregg, DC -<br />
Business School<br />
Activity Type: Graduate Research<br />
In response to the need for knowledge-based<br />
support in unstructured domains, researchers and<br />
practitioners have begun developing systems that<br />
mesh the traditional attributes <strong>of</strong> knowledge based<br />
systems (KBS) and decision support system (DSS).<br />
One such attribute being applied to KBS is dynamic<br />
interaction. In an effort to provide a mechanism that<br />
will enable researchers to quantify this system<br />
attribute, and enable practitioners to prescribe the<br />
needed aspects <strong>of</strong> dynamic interaction in a specific<br />
application, a measurement scale was developed<br />
and empirically evaluated. Control theory was used<br />
to provide the theoretical underpinnings <strong>of</strong> dynamic<br />
interaction and to identify its conceptual substrata. A<br />
pretest and exploratory study was then conducted to<br />
refine scale items that were derived from IS<br />
literature. A confirmatory study was then conducted<br />
to evaluate the nomological validity <strong>of</strong> the<br />
measurement scale.<br />
Graduate Students<br />
Importance <strong>of</strong> the Basic Helix-<br />
Loop-Helix Transcription Factor<br />
Hand2 in Crani<strong>of</strong>acial<br />
Development<br />
Nicholas Bennetts, Dentistry, AMC - School <strong>of</strong><br />
Dental Medicine<br />
Faculty Sponsor: Dr. David Clouthier, AMC -<br />
School <strong>of</strong> Dental Medicine<br />
Activity Type: Graduate Research<br />
Proper development <strong>of</strong> crani<strong>of</strong>acial tissues depends<br />
largely upon the formation, migration, differentiation,<br />
and survival <strong>of</strong> cranial neural crest (CNC) cells<br />
during embryogenesis. Within the first mandibular<br />
pharyngeal arch, CNC cell communication with<br />
surrounding tissues set up hierarchical signaling<br />
cascades, mediated by transcription factors, that<br />
direct correct spatiotemporal formation <strong>of</strong> the adult<br />
facial skeleton. Objective: To understand the<br />
function <strong>of</strong> the transcription factor Hand2 that<br />
mediates these signaling cascades and that could<br />
someday lead to treatment options for facial defects.<br />
While loss <strong>of</strong> Hand2 in zebrafish leads to<br />
crani<strong>of</strong>acial defects, loss <strong>of</strong> Hand2 in mice leads to<br />
early embryonic lethality from vascular defects,<br />
precluding further analysis. To address this problem,<br />
we have used Cre-loxP technology to create<br />
Hand2fl/fl;Wnt1-Cre embryos in which the Hand2<br />
gene is only inactivated in CNC cells, permitting<br />
analysis <strong>of</strong> its function in skull development.<br />
Hypothesis: Hand2 is a central regulator <strong>of</strong><br />
mandibular arch development. Results: We find that<br />
Hand2 mutants exhibit lower jaw defects including<br />
mandibular hypoplasia and submandibular gland<br />
absence. Conclusions: These findings suggest that<br />
Hand2 promotes lower jaw formation through<br />
maintenance <strong>of</strong> distal mandibular arch gene<br />
expression, with Hand2 loss resulting in upregulation<br />
<strong>of</strong> maxillary gene expression in the distal domain.<br />
Support: NIH/NIDCR DE14181.<br />
<strong>2009</strong> Research and Creative Activities Symposium 37
Graduate Students<br />
Physician’s Attitudes and<br />
Practices on Overweight/Obesity<br />
Kathryn Bird, Public Health, AMC - <strong>Colorado</strong><br />
School <strong>of</strong> Public Health<br />
Faculty Sponsor: Dr. Carolyn DiGuiseppi, AMC -<br />
<strong>Colorado</strong> School <strong>of</strong> Public Health<br />
Activity Type: Graduate Research<br />
Background: Physicians play important roles in<br />
identifying and treating overweight/obesity.<br />
However, inconsistent physician management <strong>of</strong> this<br />
condition has been reported. Objective:<br />
Understanding physician attitudes and practices for<br />
overweight/obesity management can inform the<br />
health department about barriers and gaps that may<br />
require future intervention. Methods: We surveyed<br />
100 randomly selected primary care physicians in<br />
Adams, Arapahoe, and Douglas Counties, asking<br />
about diagnosis, treatment, and barriers to<br />
addressing overweight/obesity. Frequencies, and<br />
differences by specialty, gender, and years in<br />
practice, will be described. Preliminary Results: The<br />
54 respondents to date were 62% male, 49% family<br />
physicians, 74% group practice, and in practice 17<br />
years on average. 87% check for obesity, and 70%<br />
(80% females, 64% males) tell overweight patients<br />
they have a weight problem, most <strong>of</strong> the time. Most<br />
common treatments were counseling on physical<br />
activity (84%) and nutrition (75%). Lack <strong>of</strong> patient<br />
motivation was the most common barrier reported<br />
(59% <strong>of</strong> physicians). Most physicians felt their<br />
knowledge was sufficient for counseling on nutrition<br />
(85%) and physical activity (95%). Only 48% (39% <strong>of</strong><br />
male and 60% <strong>of</strong> female physicians) base their<br />
management on existing clinical guidelines.<br />
Conclusion: Promoting evidence-based guidelines<br />
and improving physicians’ skills in motivating<br />
patients to lose weight may improve care.<br />
A Role for Hand2 in Cell Survival<br />
during Facial Development<br />
Jonathan Bishop, Dental Medicine, AMC - School<br />
<strong>of</strong> Dental Medicine<br />
Faculty Sponsor: Dr. David Clouthier, AMC -<br />
School <strong>of</strong> Dental Medicine<br />
Activity Type: Graduate Research<br />
Crani<strong>of</strong>acial structures are derived from cranial<br />
neural crest cells (NCCs). One factor directing NCC<br />
development in the first pharyngeal arch is the<br />
transcription factor Hand2. Complete inactivation <strong>of</strong><br />
Hand2 in mice results in almost complete NCC<br />
apoptosis (cell death) within the pharyngeal arches<br />
by embryonic day (E)10.0, though this finding has<br />
resulted in a long-standing controversy, as cell death<br />
could either be due to a direct requirement for<br />
Hand2 in NCC survival or result from decreased<br />
embryo viability. Objective: To determine whether<br />
loss <strong>of</strong> Hand2 specifically in NCCs results in wide<br />
spread apoptosis and changes in proliferation within<br />
the pharyngeal arches <strong>of</strong> mouse embryos. Methods:<br />
To address the role <strong>of</strong> Hand2 in NCC survival, we<br />
inactivated Hand2 specifically in NCCs. Embryos<br />
were then collected at E10.5, E11.5 and E12.5.<br />
Sections were examined for apoptosis, cell<br />
proliferation, and general histology. Results and<br />
Conclusion: We find that loss <strong>of</strong> Hand2 does result<br />
in a moderate increase in arch apoptosis and<br />
suggests that absence <strong>of</strong> Hand2 leads to incorrect<br />
patterning and hence cell death. However, Hand2 is<br />
not an overall cell survival signal for all NCCs within<br />
the pharyngeal arches. In contrast, cell proliferation<br />
is less affected.<br />
38<br />
<strong>2009</strong> Research and Creative Activities Symposium
Graduate Students<br />
Aldh7a1 Is a Novel Aldehyde<br />
Dehydrogenase with Multiple<br />
Functions Including Protection<br />
from Oxidative Stress<br />
Chad Brocker, Molecular Toxicology, AMC -<br />
Graduate School<br />
Faculty Sponsor: Dr. Vasilis Vasiliou, AMC -<br />
School <strong>of</strong> Pharmacy<br />
Activity Type: Graduate Research<br />
ALDH7A1 is a novel aldehyde dehydrogenase<br />
(ALDH) that plays a major role in lysine catabolism<br />
through the NAD+ dependent conversion <strong>of</strong> α-<br />
aminoadipic semialdehyde (AAS) to α-aminoadipic<br />
acid (AAA). In humans, deleterious mutations in<br />
ALDH7A1 are responsible for Pyridoxine-Dependent<br />
Epilepsy (PDE). The aim <strong>of</strong> this study is to<br />
characterize the subcellular localization, tissue<br />
distribution, biochemical properties and functions <strong>of</strong><br />
mammalian ALDH7A1. Purified human ALDH7A1<br />
protein is catalytically active with various aldehyde<br />
substrates. Western blot analyses revealed high<br />
expression <strong>of</strong> ALDH7A1 protein in mouse kidney,<br />
liver, pancreas and brain. Low expression was<br />
observed in stomach, testes and bladder.<br />
Subcellular fractionation studies,<br />
immunohistochemistry and confocal microscopy<br />
revealed ALDH7A1 protein is found in the cytosol,<br />
nucleus and mitochondria. Sequence analysis and<br />
RT-PCR identified a second novel transcriptional<br />
variant, which contains a mitochondrial targeting<br />
sequence. Both ALDH7A1 transcript variants are<br />
expressed at different levels in a tissue specific<br />
manner. The mitochondrial variant is the<br />
predominant transcript found in the liver, kidney,<br />
stomach and brain. Finally, ALDH7A1 protects<br />
against osmotic stress-induced apoptosis. In<br />
conclusion, ALDH7A1 is a novel ALDH found in the<br />
cytosol, nucleus and mitochondria, which along with<br />
its substrate specificities suggest potentially tissueand<br />
cell-specific biological roles against oxidative<br />
damage.<br />
Clogging Potential <strong>of</strong> Pervious<br />
Concrete<br />
Chelsea Campbell, Environmental Science, DC -<br />
College <strong>of</strong> Liberal Arts and Sciences<br />
Faculty Sponsor: Dr. David Mays, DC - College <strong>of</strong><br />
Engineering and Applied Science<br />
Activity Type: Graduate Research<br />
Clogging Potential <strong>of</strong> Pervious Concrete Chelsea<br />
Campbell1 J. Patrick Coughlin2,3 David C. Mays2<br />
April <strong>2009</strong> Pervious concrete is a resource for urban<br />
development due to its potential ability to reduce<br />
run<strong>of</strong>f and improve water quality. However, clogging<br />
may be a limiting factor. The purpose <strong>of</strong> this study is<br />
to quantify the possible clogging for a saturated<br />
pervious concrete system, designed to replicate<br />
real-world conditions. The pervious concrete sits on<br />
top <strong>of</strong> two fill layers <strong>of</strong> <strong>Colorado</strong> Department <strong>of</strong><br />
Transportation (CDOT) sand and CDOT base<br />
course. Particle size analysis was performed on the<br />
CDOT materials to determine the characteristics <strong>of</strong><br />
the underlying materials. By measuring the volume<br />
<strong>of</strong> displaced water, the porosity <strong>of</strong> the pervious<br />
concrete was found to be approximately 25-30%. In<br />
a modified permeameter test, results were<br />
inconclusive due to the high Reynolds number. With<br />
a Reynolds number higher than 10, Darcy’s Law<br />
cannot be applied to the system, so the hydraulic<br />
conductivity cannot be determined. Instead, by<br />
measuring differences in hydraulic head between<br />
the layers within the system, clogging can be<br />
quantified. The clogging agents used are sand and<br />
clay. This poster will present these clogging results<br />
in terms <strong>of</strong> design and application to real-world<br />
conditions.<br />
<strong>2009</strong> Research and Creative Activities Symposium 39
Graduate Students<br />
Developing a Problem Space for<br />
Exploring the Educational<br />
Experiences <strong>of</strong> Immigrant Children<br />
from China: Language, Culture,<br />
and Learning<br />
Ya-Wen Chang, EDLI, DC - School <strong>of</strong> Education<br />
and Human Development<br />
Faculty Sponsor: Dr. Sheila M. Shannon, DC -<br />
School <strong>of</strong> Education and Human Development<br />
Activity Type: Graduate Research<br />
Language rights and the guarantee <strong>of</strong> equal<br />
educational access have been denied to certain<br />
minority immigrant children (Shannon, 1999).<br />
Included in this group are immigrant children from<br />
China who are at risk <strong>of</strong> school failure (Doan, 2006).<br />
For a variety <strong>of</strong> reasons, the educational needs <strong>of</strong><br />
Chinese immigrant students have received very little<br />
attention (Wing, 2007). Without an appropriate<br />
education guiding them and helping them develop<br />
an attitude <strong>of</strong> respect toward their own culture and<br />
language, an immigrant child needs more strength to<br />
fight the hegemony <strong>of</strong> English and to be able to<br />
continue learning their own language. Therefore, I<br />
will develop a problem space to help me explore the<br />
issue <strong>of</strong> denied language rights and the subsequent<br />
loss <strong>of</strong> equal educational access to new immigrant<br />
children from China immersed in English in U.S.<br />
public schools. I will examine the factors that<br />
contribute to this problem, such as, the hegemony <strong>of</strong><br />
English, the model minority myth, and the lack <strong>of</strong><br />
bilingual education. From the data gathered, I will be<br />
able to examine these Chinese children’s learning<br />
experience in the U.S.; at the same time I will<br />
investigate if their language rights and access to<br />
education are honored.<br />
Induction <strong>of</strong> Cell Death By<br />
Receptor Expressed In Lymphoid<br />
Tissue, A Recently Identified<br />
Tumor Necrosis Factor Receptor<br />
Matt Checketts, Dental Medicine, AMC - School <strong>of</strong><br />
Dental Medicine<br />
Faculty Sponsor: Dr. John Cusick, AMC - School<br />
<strong>of</strong> Dental Medicine<br />
Activity Type: Graduate Research<br />
Tumor Necrosis Factor Receptors (TNFR) induce<br />
multiple cellular responses. RELT (Receptor<br />
Expressed in Lymphoid Tissues) is A new TNFR<br />
whose function is largely unknown. Previous results<br />
suggest RELT induces cell death (CD) in human<br />
epithelial cells (HECs). Objectives: Define portion <strong>of</strong><br />
RELT protein required to induce CD in HECs.<br />
Methods: Examined ability <strong>of</strong> RELT deletion mutants<br />
to induce CD in HECs. Performed mutagenesis <strong>of</strong><br />
RELT gene using site-directed mutagenesis and<br />
transformation <strong>of</strong> mutated plasmids into E. coli cells.<br />
Plasmid DNA isolated and DNA sequencing verified<br />
mutant constructs creation. Transient transfection <strong>of</strong><br />
HEK-293 cells used to examine the effect <strong>of</strong><br />
expressing mutant RELT constructs. CD assayed by<br />
X-gal and TUNEL. Expression <strong>of</strong> wild-type RELT<br />
and Caspase-8 were positive controls, expression <strong>of</strong><br />
empty plasmid vector was negative control. Western<br />
blots confirmed expression <strong>of</strong> mutants. Results: Four<br />
intracellular RELT deletion mutants created and<br />
used in combination with previous collection <strong>of</strong><br />
RELT mutants. Verified expression <strong>of</strong> most proteins.<br />
Mutant constructs retained varying abilities to induce<br />
apoptosis morphology and DNA fragmentation in<br />
HEK cells. Conclusion: Expression <strong>of</strong> RELT in HEK-<br />
293 cells induces apoptotic morphology and DNA<br />
fragmentation. Results suggest there might not be<br />
one single death domain in RELT. Support:<br />
NIH/NIDCR U24 DE016502<br />
40<br />
<strong>2009</strong> Research and Creative Activities Symposium
Graduate Students<br />
Automation <strong>of</strong> Web Applications<br />
and Iterative Searching for Post-<br />
Translational Modifications<br />
Simon Chiang, Biomolecular Structure, AMC -<br />
Graduate School<br />
Faculty Sponsor: Dr. Kirk Hansen, AMC -<br />
Graduate School<br />
Activity Type: Graduate Research<br />
Data intensive fields like proteomics require<br />
researchers to interact with a wide variety <strong>of</strong><br />
s<strong>of</strong>tware that is increasingly web-based. Web<br />
applications pose special challenges to<br />
programmers seeking to automate their execution.<br />
Although web applications provide a relatively<br />
standard interface to users, ie the web form, the<br />
programmatic interfaces span numerous protocols<br />
and frequently do not exist at all. We present Tap-<br />
Mechanize, a system to easily capture the output <strong>of</strong><br />
web forms for resubmission using a standard<br />
programatic interface. By capturing web forms into a<br />
standard format, Tap-Mechanize enables many web<br />
applications to be used in automated workflows.<br />
Such workflows drastically reduce the time required<br />
to analyze large datasets, facilitate reproducibility,<br />
and enable more complicated techniques to be used<br />
during analysis. We have used Tap-Mechanize to<br />
implement iterative searching <strong>of</strong> MS/MS proteomics<br />
data. Iterative searching uses a quick, general<br />
search to filter spectra <strong>of</strong> unmodified peptides, and<br />
then performs more time-consuming searches on<br />
the remaining spectra. Using iterative searching we<br />
were able identify peptides with post-translational<br />
modifications (PTMs) that normally are missed.<br />
These peptides are <strong>of</strong> particular interest because<br />
PTMs frequently regulate the function <strong>of</strong> proteins,<br />
and are implicated in many disease states.<br />
Characterizing Forest<br />
Fragmentation in Relation to<br />
C<strong>of</strong>fee Plantations in Mexico<br />
Katherine Crites, Environmental Sciences, DC -<br />
College <strong>of</strong> Liberal Arts and Sciences<br />
Faculty Sponsor: Dr. Rafael Moreno, DC - College<br />
<strong>of</strong> Liberal Arts and Sciences<br />
Activity Type: Graduate Research<br />
This project aims to characterize forest<br />
fragmentation patterns in Mexico in relationship to<br />
c<strong>of</strong>fee plantations throughout the country. By<br />
building upon research by Dr. Rafael Moreno –<br />
which has shown the relationship <strong>of</strong> deforestation in<br />
Mexico to populated areas – and by utilizing<br />
geographic information systems (GIS) to analyze<br />
spatial relationships, we hope to understand more<br />
fully the role <strong>of</strong> agriculture in forest fragmentation<br />
throughout Mexico. Parameters examined will<br />
include physical characterizations <strong>of</strong> c<strong>of</strong>fee farms<br />
such as slope, elevation, aspect, as well as their<br />
relationship to both current forest fragments and the<br />
potential for further deforestation. The outcome <strong>of</strong><br />
the research will lead to a better understanding <strong>of</strong><br />
forest fragmentation in Mexico and the role in which<br />
c<strong>of</strong>fee farms facilitate deforestation, allowing policymakers,<br />
stakeholders, scientists, and others to utilize<br />
the land in a more sustainable manner.<br />
<strong>2009</strong> Research and Creative Activities Symposium 41
Graduate Students<br />
2-Bromoethanamine (BEA)<br />
Induces Papillary Necrosis by<br />
Impairing the Function <strong>of</strong> TonEBP<br />
under Hypertonic Stress in Kidney<br />
Cells<br />
Amanda Crunk, molecular biology, AMC - Graduate<br />
School<br />
Faculty Sponsor: Dr. Uwe Christians, AMC -<br />
School <strong>of</strong> Medicine<br />
Activity Type: Graduate Research<br />
Renal papillary necrosis (RPN) may occur as a<br />
consequence <strong>of</strong> long-term abuse <strong>of</strong> nonsteroidal<br />
antiinflamatory drugs (NSAIDs). However, the<br />
molecular mechanisms whereby NSAIDs induce<br />
papillary necrosis are not well-understood.A major<br />
limitation to the study <strong>of</strong> RPN pathogenesis is the<br />
required chronic exposure before clinical detection<br />
<strong>of</strong> injury. In the present study, 2-bromoethanamine<br />
(BEA), a well-known papillotoxic drug, was<br />
employed to simulate rapid NSAID toxicity using<br />
inner medullary collecting duct (IMCD3) cells. Since<br />
TonEBP (Tonicity Enhacer Binding Protein) is a<br />
transcription factor that is critical to cell survival in<br />
hypertonic conditions, we undertook experiments to<br />
examine the effect <strong>of</strong> BEA on TonEBP expression.<br />
Exposure <strong>of</strong> cells to 10 μM BEA resulted in a<br />
substantial reduction in cell viability, TonEBP protein<br />
expression and nuclear translocation after 24 hours<br />
<strong>of</strong> hypertonic stress. Furthermore, hypertonicity<br />
induced expression <strong>of</strong> TonEBP target genes was<br />
markedly blunted in BEA treated cells. Finally, we<br />
found a substantial decrease in TonEBP expression<br />
in medullary kidney tissues from mice injected with a<br />
single IP dose <strong>of</strong> BEA.Our data therefore supports<br />
the notion that TonEBP is a potential target for BEA<br />
and possibly other nephrotoxins leading to the<br />
process <strong>of</strong> papillary necrosis.<br />
Familial Idiopathic Scoliosis in<br />
Males: Localization to<br />
Chromosome 22q<br />
Jeffrey Dunn, MD, AMC - School <strong>of</strong> Medicine<br />
Shane Cook, MD, AMC - School <strong>of</strong> Medicine<br />
Faculty Sponsor: Dr. Nancy Hadley-Miller, AMC -<br />
School <strong>of</strong> Medicine<br />
Activity Type: Graduate Research<br />
Idiopathic scoliosis (IS) is a structural lateral curve <strong>of</strong><br />
the spine <strong>of</strong> ≥10° that occurs in otherwise normal<br />
individuals, the most severe curves affecting<br />
females. Scoliosis is genetic in nature; however,<br />
many genes affect its expression and variability. The<br />
current study identifies a particular group <strong>of</strong> families<br />
with male affected individuals. Male individuals with<br />
scoliosis are known to be more rigid, have a higher<br />
prevalence <strong>of</strong> thoracic curves, and have curve<br />
progression that <strong>of</strong>ten persists beyond that <strong>of</strong><br />
females. The goal <strong>of</strong> this study was to examine the<br />
genetic etiology <strong>of</strong> scoliosis in males with a<br />
curvature <strong>of</strong> ≥30°. Under IRB approval, families with<br />
IS were identified and blood samples with genomic<br />
DNA were obtained. All individuals underwent<br />
genomic screening. Linkage analyses identified a<br />
subgroup <strong>of</strong> males diagnosed with ≥30° idiopathic<br />
spinal curvature in adolescence. Analyses <strong>of</strong> this<br />
subgroup revealed very significant p-values for<br />
markers on chromosome 22q. This area <strong>of</strong><br />
chromosome 22 is associated with several<br />
candidate genes. Most notable is the deletion at<br />
22q11.2, associated with the velo-cardio-facial<br />
syndrome and implicated in musculoskeletal<br />
disorders including scoliosis. Future goals include<br />
the finer mapping <strong>of</strong> this area <strong>of</strong> chromosome 22q.<br />
42<br />
<strong>2009</strong> Research and Creative Activities Symposium
Graduate Students<br />
The Roles <strong>of</strong> HIF1 and HIF2 in<br />
Head and Neck Cancer<br />
Lindsey Dundas, Dentistry, AMC - School <strong>of</strong> Dental<br />
Medicine<br />
Faculty Sponsor: Dr. Cheng-Jun Hu, AMC -<br />
School <strong>of</strong> Dental Medicine<br />
Activity Type: Graduate Research<br />
Objectives: Hypoxia-inducible factors HIF1 and HIF2<br />
play important roles in the progression <strong>of</strong> several<br />
solid tumors including liver and kidney. However, the<br />
role <strong>of</strong> HIF1 and HIF2 in head and neck (HN) cancer<br />
progression is still not clear. This study is to<br />
determine if HIF1 and HIF2 are expressed, and the<br />
individual role <strong>of</strong> HIF1 and HIF2 in HN cancer<br />
growth. Results: Using quantitative PCR, we<br />
determined that both HIF1 and HIF2 mRNA are<br />
expressed in all HN cancer lines we analyzed.<br />
Interestingly, UMSCC22B and HN-31 cell lines<br />
exhibited hypoxic induction <strong>of</strong> HIF1 and HIF2 mRNA<br />
expression. Consistent with HIF mRNA data, HIF<br />
proteins were detected in all HN cells cultured under<br />
hypoxia. To study the individual role <strong>of</strong> HIF1 and<br />
HIF2, we knocked down HIF1 or HIF2 mRNA in HN-<br />
31 cells using siRNA technology. We found that<br />
HIF1 was required for hypoxic induction <strong>of</strong> PKG<br />
(glucose metabolism) while both HIF1 and HIF2<br />
likely activate ADM (angiogenesis). Conclusions: 1)<br />
HN cancer cells express both HIF1 and HIF2; 2)<br />
Some HN cancers exhibit hypoxia induction <strong>of</strong> HIF1<br />
and HIF2 mRNA; 3) Our preliminary data also<br />
supports a distinct role <strong>of</strong> HIF1 and HIF2 in gene<br />
regulation and HN cancer progression.<br />
Annual Variation for Effective<br />
Pollination in Penstemon degeneri<br />
Crosswhite (Plantaginaceae), a<br />
Rare <strong>Colorado</strong> Endemic<br />
Carol English, Biology, DC - College <strong>of</strong> Liberal Arts<br />
and Sciences<br />
James Sommers Saunders, Biology, DC - College<br />
<strong>of</strong> Liberal Arts and Sciences<br />
Rogan Adams, Biology, DC - College <strong>of</strong> Liberal Arts<br />
and Sciences<br />
Faculty Sponsor: Dr. Leo Bruederle, DC - College<br />
<strong>of</strong> Liberal Arts and Sciences<br />
Activity Type: Graduate Research<br />
Field research addressing pollination biology in<br />
Penstemon degeneri Crosswhite (Plantaginaceae),<br />
a rare <strong>Colorado</strong> endemic, was conducted at three<br />
sites over two field seasons characterized by<br />
extreme variation for precipitation. Although overall<br />
species diversity was similar each year, the visitor<br />
guild differed dramatically over this period, as did<br />
effective pollination. Two bumblebee species<br />
(Apidae) were determined to be highly effective<br />
pollinators in 2007, yet few bumblebees were<br />
observed in 2008 and these carried little body pollen<br />
and no scopal pollen. Mason bees (Megachilidae)<br />
were also determined to be effective pollinators in<br />
2007, yet they occurred in relatively low numbers in<br />
2007 and only at the high elevation site. Mason bees<br />
were most abundant at all three sites in 2008 and<br />
were 80% faithful to P. degeneri pollen, carrying<br />
copious amounts <strong>of</strong> body pollen. Pseudomasaris<br />
vespoides, a pollen wasp that has been described<br />
as being oligolectic for Penstemon, was<br />
encountered infrequently in 2007, yet it was one <strong>of</strong><br />
the most frequent visitors in 2008. Furthermore, nine<br />
<strong>of</strong> ten individuals captured in 2008 carried copious<br />
amounts <strong>of</strong> body pollen. These results suggest that<br />
seasonal precipitation can influence strongly the<br />
visitor guild, as well as effective pollination in P.<br />
degeneri.<br />
<strong>2009</strong> Research and Creative Activities Symposium 43
Graduate Students<br />
Livable Communities<br />
Steven Foltz, Architecture, DC - College <strong>of</strong><br />
Architecture and Planning<br />
Faculty Sponsor: Mr. Keith L<strong>of</strong>tin, DC - College <strong>of</strong><br />
Architecture and Planning<br />
Activity Type: Graduate Research<br />
The presence <strong>of</strong> a mixed use, livable development<br />
embraces the concept <strong>of</strong> socially sustainability.<br />
Throughout the 2008-<strong>2009</strong> school year, I researched<br />
the extents to which design impacts individuals <strong>of</strong><br />
diverse social and economic circumstances, ages,<br />
and abilities. My search led me to work with the<br />
<strong>Colorado</strong> Coalition for the Homeless and to<br />
participate in a Livable Communities design<br />
competition. During the fall semester <strong>of</strong> 2008, I<br />
joined the team <strong>of</strong> housing developers at the<br />
<strong>Colorado</strong> Coalition for the Homeless to observe<br />
what action is being taken to extend the benefits <strong>of</strong><br />
sustainable design to transitional housing<br />
developments for low and extremely low-income<br />
citizens. Despite the constraints that are associated<br />
with these buildings, I discovered that the benefits <strong>of</strong><br />
sustainable design are being implemented with great<br />
success. The challenge for the spring semester <strong>of</strong><br />
<strong>2009</strong> was to implement what I learned in a<br />
completion focused on the design <strong>of</strong> a livable<br />
community. I sought to design a mixed use<br />
development that removes barriers from<br />
environments in which we work, live, and gather. By<br />
implementing universal design techniques, I<br />
designed the building and surrounding landscape to<br />
facilitate people <strong>of</strong> varying ages and abilities.<br />
The Effect <strong>of</strong> Plasticity in cuticular<br />
hydrocarbon pr<strong>of</strong>iles on the<br />
collective Decision Making <strong>of</strong><br />
Pavement Ant (Tetramorium<br />
caespitum) Colonies<br />
Nathan Frank, biology, DC - College <strong>of</strong> Liberal Arts<br />
and Sciences<br />
Faculty Sponsor: Dr. Michael Greene, DC -<br />
College <strong>of</strong> Liberal Arts and Sciences<br />
Activity Type: Graduate Research<br />
Chemical cues are used by social insects to<br />
differentiate between members <strong>of</strong> their own colony<br />
and individuals belonging to other colonies. Cues<br />
present in cuticular hydrocarbons (CHCs) have been<br />
shown to be important in the regulation <strong>of</strong> social<br />
insect societies, particularly in ants. The objective <strong>of</strong><br />
my research project is to further elucidate the<br />
specific factors which influence the composition and<br />
expression <strong>of</strong> pavement ant (Tetramorium<br />
caespitum) colonies’ CHC pr<strong>of</strong>ile and determine how<br />
colonies’ CHC pr<strong>of</strong>iles can be manipulated to elicit<br />
aggression responses from former colony mates.<br />
Changes in CHC pr<strong>of</strong>iles will be measured using gas<br />
chromatography to quantify changes in overall CHC<br />
composition. In addition to objective measurements<br />
<strong>of</strong> CHCs, behavioral assays will be used to<br />
determine the effects <strong>of</strong> CHC manipulation on the<br />
colony itself. The presence <strong>of</strong> aggression behavior<br />
and the degree <strong>of</strong> aggression from former colony<br />
mates toward individuals in which CHCs have been<br />
manipulated will be used as a way to measure the<br />
effects <strong>of</strong> altered CHCs on the colony.<br />
44<br />
<strong>2009</strong> Research and Creative Activities Symposium
Graduate Students<br />
Affordable Green Housing<br />
Aris Garrison, architecture, DC - College <strong>of</strong><br />
Architecture and Planning<br />
Faculty Sponsor: Mr. Rick Sommerfield, DC -<br />
College <strong>of</strong> Architecture and Planning<br />
Activity Type: Graduate Creative Activity<br />
Can housing be affordable, beautiful and<br />
sustainable? Greensburg Kansas, destroyed by a F5<br />
tornado two years ago has asked this question <strong>of</strong><br />
the <strong>University</strong> <strong>of</strong> <strong>Colorado</strong> <strong>Denver</strong> and we have an<br />
answer. Using intelligent design and research a<br />
prototype house has been developed for the town <strong>of</strong><br />
Greensburg. It has presented an elegant low cost<br />
housing solution for the climate and culture <strong>of</strong><br />
Greensburg. This design embraces passive solar<br />
design and day lighting while using sustainable<br />
products and smart contemporary design. It is<br />
intended to be a starter home for the current and<br />
future residence <strong>of</strong> Greensburg. The first phase <strong>of</strong><br />
the project is approximately 750 square feet with<br />
one bedroom that costs about $70,000. The house<br />
is design for expansion so it can grow with the<br />
tenant into a 3 bedroom or 2 bedroom live/work<br />
space. This gives residence the opportunity to move<br />
in now and not outgrow their investment while<br />
adding quality and value to the housing stock in this<br />
small community.<br />
Characterizing Optical Properties<br />
<strong>of</strong> Photodynamic Therapy<br />
Sensitizers<br />
Gregory Glazner, EE, DC - College <strong>of</strong> Engineering<br />
and Applied Science<br />
Faculty Sponsor: Dr. Zheng Huang, AMC - School<br />
<strong>of</strong> Medicine<br />
Activity Type: Graduate Research<br />
Photodynamic therapy (PDT) is the combination <strong>of</strong><br />
light with a photosensitizing drug to selectively kill<br />
targeted cells. It has recently become much more<br />
important as a treatment for many types <strong>of</strong> cancers<br />
including skin, esophageal, lung and breast<br />
malignancies. It is also used in the treatment <strong>of</strong> age<br />
related macular degeneration (AMD) and several<br />
pre-cancerous conditions. Currently, continuouswave<br />
lasers (single photon technique) are used to<br />
perform PDT. Recently, researchers have started to<br />
use two-photon infrared excitation employing<br />
ultrafast pulsed lasers for PDT treatment. This has<br />
several advantages over single photon excitation<br />
including much better penetration <strong>of</strong> tissue and<br />
excellent three-dimensional resolution. Excitation<br />
volumes created by the ultrafast laser are in the<br />
range <strong>of</strong> femtoliters, which gives close to molecular<br />
level control in treatment. It is important to measure<br />
the one-photon and two-photon absorption crosssections<br />
<strong>of</strong> various photosensitizing drugs which<br />
describe how well the drug absorbs energy from the<br />
treatment light to determine treatment parameters. In<br />
this research we characterize optical properties <strong>of</strong><br />
some known photosensitizers - Phot<strong>of</strong>rin®, Tookad®<br />
and Foslip® to compare to published results. We<br />
then investigate a new compound (HMME) to<br />
determine its one and two photon cross-section and<br />
absorption and emission characteristics.<br />
<strong>2009</strong> Research and Creative Activities Symposium 45
Graduate Students<br />
Teachers Voices<br />
Hilary Greenebaum, EDLI, DC - School <strong>of</strong><br />
Education and Human Development<br />
Faculty Sponsor: Dr. Dorothy Garrison Wade, DC -<br />
School <strong>of</strong> Education and Human Development<br />
Activity Type: Graduate Research<br />
The purpose <strong>of</strong> this phenomenological research<br />
study is to describe the experiences <strong>of</strong> the youngest<br />
cohort <strong>of</strong> teachers to gain a deeper understanding <strong>of</strong><br />
their work and thus potentially retain them in the<br />
pr<strong>of</strong>ession. Currently, a large number <strong>of</strong> teachers<br />
leave the field within the first few years. Teacher<br />
turnover leads to unnecessary financial expenditure,<br />
organizational instability, low levels <strong>of</strong> organizational<br />
pedagogy, and a revolving door <strong>of</strong> adults in<br />
students’ lives. While there are a number <strong>of</strong> studies<br />
that report on teacher turnover, none found use the<br />
qualitative method <strong>of</strong> phenomenology or the<br />
generational theory <strong>of</strong> Strauss and Howe (1991,<br />
1997, 2000) to frame the work. This study describes<br />
the experiences <strong>of</strong> six metropolitan teachers who<br />
teach Reading, Writing, Math, Science to students in<br />
grades 3-10. The six participants are each described<br />
by a summary story, five major themes (Pr<strong>of</strong>essional<br />
Identity, Affective Reactions, Technology and Social<br />
Networking, Cultural Implications, and<br />
Pr<strong>of</strong>essional/Administrative Supports), and the<br />
essence: working in a school. Each teacher<br />
experiences a number <strong>of</strong> active internal and external<br />
processes in their work as a teacher; therefore, the<br />
essence <strong>of</strong> these particular teachers’ experiences is<br />
Seeking to Thrive. An abundance <strong>of</strong> teachers’<br />
quotes lends credibility and authenticity to the study.<br />
Tracking Changes in miRNA<br />
Expression in Melanoma: A Path<br />
toward Earlier Diagnosis and<br />
Targeted Therapies?<br />
Susan Hammerman, Biology, DC - College <strong>of</strong><br />
Liberal Arts and Sciences<br />
Faculty Sponers: Dr. Lynne T. Bemis, School <strong>of</strong><br />
Medicine<br />
Dr. Aimee Bernard, DC -<br />
College <strong>of</strong> Liberal Arts and Sciences<br />
Activity Type: Graduate Research<br />
Melanoma is a cutaneous cancer for which early<br />
detection is critical. Patients in advanced stages<br />
have poor prognosis, with a five-year survival rate <strong>of</strong><br />
15.5%. MicroRNAs (MiRs) are non-coding<br />
ribonucleic acid transcripts, between 16 and 29<br />
nucleotides long. MiR genes have been identified in<br />
genomic regions subject to chromosomal<br />
modification in cancer, suggesting MiRs function in<br />
pathogenesis. MiR gene expression patterns<br />
indicate trends in diagnosis, staging, and prognosis.<br />
They have potential as biological markers for<br />
diagnosis and targeted therapy development. MiR<br />
alterations in melanoma were the focus <strong>of</strong> this<br />
research. An analysis <strong>of</strong> microarray data to identify<br />
over-expression <strong>of</strong> MiRs in three melanoma cell<br />
lines compared with benign nevi is presented. Based<br />
upon this assessment, recent findings <strong>of</strong> the Division<br />
<strong>of</strong> Medical Oncology and current literature, we<br />
selected three MiRs (MiR-15b, MiR- 21 and MiR-<br />
183) for further evaluation <strong>of</strong> their role in melanoma<br />
pathogenesis. Initial results by quantitative real-time<br />
polymerase chain reaction (qRT-PCR) show in<br />
additional melanoma cell lines, MiR-21 is highly<br />
expressed as predicted. We will report on<br />
expression <strong>of</strong> other selected MiRs in our final<br />
analysis. These assays ultimately will be expanded<br />
to include blood serum from patients with resected<br />
melanoma, to test for presence <strong>of</strong> selected MiRs.<br />
46<br />
<strong>2009</strong> Research and Creative Activities Symposium
Graduate Students<br />
Resonances in Superconducting<br />
Quantum Interference Device<br />
Series Array Amplifiers in<br />
Feedback Operation and at RF<br />
Frequencies<br />
Bruce Hines, Electrical Engineering, DC - College<br />
<strong>of</strong> Engineering and Applied Science<br />
Faculty Sponsor: Dr. Martin E. Huber, DC -<br />
College <strong>of</strong> Liberal Arts and Sciences<br />
Activity Type: Graduate Research<br />
Superconducting Quantum Interference Device<br />
Series Array Amplifiers (SSAAs) are subject to<br />
resonances at many different frequencies due to<br />
coupling between various superconducting<br />
inductors, parasitic capacitances, and transmission<br />
line reflections. In one common application, the<br />
detection and amplification <strong>of</strong> very small signals by<br />
operation in feedback mode, resonant peaking<br />
occurs in the SSAA output. Investigation by use <strong>of</strong> a<br />
Vector Network Analyzer and Spice modeling has<br />
shown that inductive coupling within the SQUID is<br />
not the cause <strong>of</strong> this peaking in the transfer function<br />
and provided insight into the behavior <strong>of</strong> SSAAs at<br />
RF frequencies.<br />
<strong>2009</strong> Research and Creative Activities Symposium 47
Graduate Students<br />
Nuclear Translocation <strong>of</strong> PKCl in<br />
Salivary Acinar Cells<br />
plays a role in nuclear import <strong>of</strong> PKCδ and whether it<br />
constitutes a binding site for SH3 containing tyrosine<br />
kinase.<br />
Matthew Hockin, DDS, AMC - School <strong>of</strong> Dental<br />
Medicine<br />
Faculty Sponsor: Dr. Mary Reyland, School <strong>of</strong><br />
Dental Medicine<br />
Activity Type: Graduate Research<br />
According to the National Institute for Dental and<br />
Crani<strong>of</strong>acial Research, it is estimated that there are<br />
approximately 40,000 new cases <strong>of</strong> xerostomia each<br />
year as a result <strong>of</strong> irradiation induced damage <strong>of</strong> the<br />
salivary gland in head and neck cancer patients.<br />
Apoptosis contributes to this irradiation induced<br />
salivary gland damage. Our lab has identified PKCδ,<br />
a serine/threonine kinase, as a critical regulator <strong>of</strong><br />
salivary epithelial cell apoptosis and mice in which<br />
the PKCδ gene has been disrupted are protected<br />
against irradiation induced damage to their salivary<br />
gland. Previously we have shown that nuclear<br />
accumulation <strong>of</strong> PKCδ is required for apoptosis, and<br />
we have identified a nuclear localization signal<br />
(NLS) that regulates nuclear import and in turn the<br />
pro-apoptotic function <strong>of</strong> PKCδ. Since under basal<br />
conditions PKCδ is primarily located in the<br />
cytoplasm, we predict that a second, apoptosis<br />
specific signal, is also required for nuclear import.<br />
Our studies show that PKCδ is rapidly<br />
phosphorylated on tyrosine residues in response to<br />
apoptotic signals and that phosphorylation on two<br />
specific tyrosine residues, Y64 and Y155, is required<br />
for nuclear localization <strong>of</strong> PKCδ. Thus the overall<br />
goal <strong>of</strong> the current studies is to understand how<br />
tyrosine phosphorylation on these residues<br />
regulates PKCδ nuclear import. Here we have<br />
specifically addressed the question <strong>of</strong> how tyrosine<br />
kinases interact with PKCδ in response to apoptotic<br />
signals. Tyrosine kinases interact with other proteins<br />
via src-homology (SH2 and SH3) domains.<br />
Sequence analysis has revealed a single putative<br />
SH3 domain ligand (PxxP) in PKCδ, which overlaps<br />
the NLS. We hypothesize that in response to<br />
apoptotic stimuli, a SH3 domain containing tyrosine<br />
kinase (TK) binds to the PxxP site and<br />
phosphorylates Y64 and Y155 in the δRD, allowing<br />
nuclear import <strong>of</strong> PKCδ. Using site directed<br />
mutagenesis, and Western blotting analysis we were<br />
able to show that mutation in the PxxP motif does<br />
not effect tyrosine phosphorylation <strong>of</strong> Y64, but<br />
instead abolished phosphorylation at other critical<br />
sites in PKCδ that are important for kinase activity.<br />
Further studies will address whether the PxxP motif<br />
48<br />
<strong>2009</strong> Research and Creative Activities Symposium
Graduate Students<br />
Lipid-coated Nanoparticles as<br />
Mimics <strong>of</strong> Biological Membranes<br />
for C -Reactive Protein Detection<br />
Heather Hodges, Chemistry, DC - College <strong>of</strong> Liberal<br />
Arts and Sciences<br />
Faculty Sponsor: Dr. Scott Reed, DC - College <strong>of</strong><br />
Liberal Arts and Sciences<br />
Activity Type: Graduate Research<br />
C-reactive protein (CRP), a cardiovascular disease<br />
biomarker, binds to oxidized lipoprotein particles and<br />
apoptotic cells via phosphocholine (PC) head groups<br />
within lipid membranes. The affinity <strong>of</strong> CRP for PC<br />
increases when the PC becomes oxidized (oxPC). It<br />
remains a challenge to understand how CRP<br />
distinguishes between PC and oxPC and how<br />
spatial distribution <strong>of</strong> oxPC influences binding. We<br />
have designed a model system that serves as a<br />
mimic <strong>of</strong> nanoscale lipoprotein particles. These<br />
biomimics consist <strong>of</strong> PC stabilized gold<br />
nanoparticles that utilize a rigid metal core to<br />
support a variable lipid bilayer. This system allows<br />
for control <strong>of</strong> shape, size, composition, and<br />
presentation <strong>of</strong> PC. In conjunction with a high affinity<br />
flurophore-labeled RNA sequence specific to CRP<br />
we are able to assess the chemical and structural<br />
requirements for the binding <strong>of</strong> CRP using<br />
fluorescence anisotropy. Strong CRP binding was<br />
observed when 10 nm particles were templated with<br />
PC or a mixture <strong>of</strong> PC-oxPC. Binding was not<br />
observed for 30 nm liposomes without nanoparticles<br />
even when oxPC was present. This indicates that<br />
CRP recognizes PC head groups at points <strong>of</strong> high<br />
curvature whether from PC or oxPC and the<br />
presence <strong>of</strong> oxPC alone is not enough to induce<br />
binding.<br />
Electricity Generation and<br />
Treatment <strong>of</strong> High Strength Animal<br />
Liquid Waste Using Microbial Fuel<br />
Cells<br />
Yun-Hsiang Huang, Civil Engineering, DC - College<br />
<strong>of</strong> Engineering and Applied Science<br />
Faculty Sponsor: Dr. ZhiYong (Jason) Ren, DC -<br />
College <strong>of</strong> Engineering and Applied Science<br />
Activity Type: Graduate Research<br />
Electricity Generation and Treatment <strong>of</strong> High<br />
Strength Animal Liquid Waste Using Microbial Fuel<br />
Cells Yun-Hsiang Huang, Civil Engineering, College<br />
<strong>of</strong> Engineering and Applied Science Faculty Mentor:<br />
Dr. ZhiYong (Jason) Ren, Civil Engineering, College<br />
<strong>of</strong> Engineering and Applied Science Activity Type:<br />
Graduate Research The treatment <strong>of</strong> high strength<br />
animal waste has been a great challenge for both<br />
industrial and agricultural operations. Microbial fuel<br />
cells (MFCs) have been shown to have the<br />
capability <strong>of</strong> recovering electricity from many organic<br />
waste streams with high treatment efficiency, but few<br />
studies focused on high strength animal wastes.<br />
Concentrated liquid wastes were collected from<br />
different locations in a local zoo and characterized<br />
and tested for electricity production in MFCs. High<br />
concentration <strong>of</strong> COD (78,000 mg/L), Nitrogen<br />
(2,860 mg/L), and Total Solids (53,185 mg/L) were<br />
found in initial samples. To test the potential <strong>of</strong><br />
electricity production, samples were diluted serially,<br />
neutralized, and applied in single chamber aircathode<br />
MFCs. In fed-batch mode, electricity began<br />
to generate after two batches, with the highest<br />
power density <strong>of</strong> 3.02E-3 mW/m2. About 87% <strong>of</strong><br />
COD has been removed during the first batch.<br />
Further studies are underway for improving power<br />
production and optimizing system performance.<br />
<strong>2009</strong> Research and Creative Activities Symposium 49
Graduate Students<br />
The Social Construction <strong>of</strong> the<br />
International Criminal Tribunal for<br />
the Former Yugoslavia<br />
Sheila M. Huss, Public Affairs, DC - School <strong>of</strong><br />
Public Affairs<br />
Faculty Sponsor: Dr. Peter deLeon, DC - School <strong>of</strong><br />
Public Affairs<br />
Activity Type: Graduate Research<br />
This poster presentation illuminates the policy<br />
design context <strong>of</strong> the United Nation’s establishment<br />
<strong>of</strong> the International Criminal Tribunal for the Former<br />
Yugoslavia (ICTY). Specifically, it applies Schneider<br />
and Ingram’s (1997) social construction framework<br />
to the creation <strong>of</strong> this war crimes tribunal, focusing<br />
on the negative social construction <strong>of</strong> the target<br />
population (individuals responsible for war crimes<br />
committed during the Balkan War), as well as the<br />
positive social construction <strong>of</strong> the actors involved in<br />
the policy-making. Social construction theory <strong>of</strong>fers<br />
insights on the background <strong>of</strong> how the policy<br />
problem, its influential factors, and the players<br />
involved came to be defined and consequently, how<br />
their social constructions affected the<br />
implementation <strong>of</strong> the ICTY. Importantly, it<br />
emphasizes that policies cannot be divorced from<br />
their instrumental and symbolic consequences,<br />
consequences that are shaped by how the relevant<br />
actors in the policy design context are<br />
conceptualized.<br />
Misregulation <strong>of</strong> Dlx5/6 in Hand2<br />
Mutants Leads to Loss <strong>of</strong> Tongue<br />
Francie Hyndman, Cell Biology, Stem Cells, and<br />
Development, AMC - Graduate School<br />
Faculty Sponsor: Dr. David Clouthier, AMC -<br />
School <strong>of</strong> Dental Medicine<br />
Activity Type: Graduate Research<br />
<strong>2009</strong> Outstanding Research and Creative<br />
Activities Award Winner<br />
Lower jaw development is orchestrated by signaling<br />
cascades that are regulated temporspatially, and are<br />
refined through permissive and inhibitory signals.<br />
We have previously shown that endothelin-A<br />
receptor signaling is crucial for establishing the<br />
identity <strong>of</strong> cranial neural crest (CNC) cells in the<br />
mandibular arch through a mechanism that involves<br />
Dlx5 and Dlx6 (Dlx5/6). Dlx5/6 induce expression <strong>of</strong><br />
Hand2, a basic helix-loop-helix transcription factor.<br />
Little is known about the function <strong>of</strong> Hand2 in<br />
mammalian facial development because Hand2-/-<br />
embryos die by embryonic day (E) 10.5 from<br />
vascular failure. To circumvent this lethality, we<br />
created a conditional targeted Hand2 mouse line<br />
using a Cre-loxP approach. Using the Wnt1-Cre<br />
mouse line, we deleted Hand2 within all CNC cells.<br />
We find that Hand2 conditional knockout mice<br />
exhibit facial defects that include mandibular<br />
hypoplasia and loss <strong>of</strong> tongue (aglossia). Aglossia is<br />
preceded by aberrant maintenance <strong>of</strong> Dlx5/6<br />
expression in the disto-oral mandibular arch<br />
mesenchyme. In vitro studies show that Hand2<br />
represses the Dlx5/6 pharyngeal arch-specific<br />
enhancer. Thus, Hand2 normally ensures normal<br />
tongue development by repressing Dlx5/6<br />
expression within the disto-oral mandibular arch. In<br />
the absence <strong>of</strong> Hand2, Dlx5/6 expression is<br />
maintained and ectopically activates an osteogenic<br />
program at the expense <strong>of</strong> a tongue development<br />
program.<br />
50<br />
<strong>2009</strong> Research and Creative Activities Symposium
Graduate Students<br />
Platelet Gene Expression in Acute<br />
Coronary Syndrome<br />
prognostic tool for a future ACS event in<br />
atherosclerosis risk factor-based subsets <strong>of</strong> CAD<br />
patients.<br />
Anna Ivashchenko, Biology, DC - College <strong>of</strong> Liberal<br />
Arts and Sciences<br />
Faculty Sponsor: Dr. David Calverly, AMC -<br />
School <strong>of</strong> Medicine<br />
Activity Type: Graduate Research<br />
Background: Platelets play a major role in the<br />
pathophysiology <strong>of</strong> acute coronary syndrome.<br />
Recent evidence reveals megakaryocyte-derived<br />
platelet pre-mRNA is spliced to mRNA and then<br />
translated into functional proteins in response to<br />
external stimulation through surface receptor<br />
activation and outside-in signaling. Prior studies<br />
have shown platelet transcriptome data correlates<br />
well with proteomic data. Hypothesis: We<br />
hypothesized that a subset <strong>of</strong><br />
megakaryocyte/platelet genes will be found to be<br />
significantly over or underexpressed in ACS<br />
compared with stable CAD, and for this reason<br />
weâ€ll be able to characterize a gene expression<br />
pr<strong>of</strong>ile for further study. Methods: A pilot study has<br />
been conducted incorporating microarray studies<br />
employing an Affymetrix exon array that provides<br />
genomic information beyond classical gene<br />
expression, namely the analysis <strong>of</strong> pre-mRNA<br />
alternative splicing. This tool is particularly useful in<br />
this setting since no transcription takes place in the<br />
anucleate platelet as compared with pre-mRNA<br />
splicing and translation that do take place. Clinical<br />
and laboratory-based atherosclerosis risk factors<br />
were tabulated in both patient groups. Results: Initial<br />
analysis reveals an expression pr<strong>of</strong>ile that includes<br />
79 statistically over- or underexpressed genes that<br />
has been developed from five patients with ACS<br />
compared with four controls with stable CAD in a<br />
university hospital setting. Despite the small sample<br />
number currently available, unsupervised<br />
hierarchical clustering leads to a heat map in which<br />
complete separation <strong>of</strong> the two sets takes place<br />
based on respective expression pr<strong>of</strong>iles.<br />
Representative differentially expressed genes<br />
include those whose protein products play roles in<br />
platelet adhesion and activation, inflammation,<br />
fibrinolysis, and extracellular matrix remodeling<br />
among others. Conclusion: Though preliminary, our<br />
study reveals a distinct platelet-based gene<br />
expression signature that differentiates between<br />
those with ACS and stable CAD. Efforts are<br />
underway to increase the number <strong>of</strong> study subjects<br />
and thus validate a smaller set <strong>of</strong> high ranking genes<br />
that would carry the potential to be used as a<br />
<strong>2009</strong> Research and Creative Activities Symposium 51
Graduate Students<br />
Detecting Mercury Fluorescence<br />
Signature through Two-Photon<br />
Excitation<br />
Todd Johnson, MSEE, DC - College <strong>of</strong> Engineering<br />
and Applied Science<br />
Faculty Sponsor: Dr. Tim Lei, DC - College <strong>of</strong><br />
Engineering and Applied Science<br />
Activity Type: Graduate Research<br />
Detecting Mercury Fluorescence Signature through<br />
Two-Photon Excitation Mercury has a wide<br />
occurrence in the environment. The toxicological<br />
effects <strong>of</strong> mercury and its compounds on biological<br />
organisms and the environment have been notably<br />
recognized. Thus, developing low cost methods to<br />
detect Mercury has great impact in environment<br />
protection. The current methods <strong>of</strong> mercury<br />
detection require expensive laser systems to<br />
generate optical photons in the UV range. In this<br />
project, a much simplified approach is taken in which<br />
low cost UV LEDs are used as our light sources for<br />
mercury detection. Distinct optical fluorescence <strong>of</strong><br />
elemental Mercury in 546nm can be observed if the<br />
Mercury atom is first excited by 250nm and<br />
subsequently by 405nm photons. Since the<br />
excitation and fluorescence wavelengths are so<br />
distinctive and specific, Mercury concentration on<br />
surfaces can be unambiguously determined by<br />
measuring the fluorescence intensity. This research<br />
will show the experimentation involved, apparatus<br />
constructed, evidence collected, results formulated,<br />
and future work to be done in conjunction with this<br />
project. A method will be developed to quantify the<br />
amount <strong>of</strong> mercury in various substances in a<br />
nondestructive manner which is an improvement<br />
over existing methods by means <strong>of</strong> size, process,<br />
and cost.<br />
The Effects on the Modulation <strong>of</strong><br />
Cav1.2 When AKAP79/150 is<br />
Covalently Linked to Calcineurin<br />
Jeffery Juergens, Pharmacology, AMC - Graduate<br />
School<br />
Faculty Sponsor: Dr. William A. Sather, AMC -<br />
Graduate School<br />
Activity Type: Graduate Research<br />
L-type voltage gated calcium channels (LTCCs) are<br />
pores in the plasma membrane <strong>of</strong> excitable cells that<br />
allow calcium ions to pass into the cell in response<br />
to an action potential. In neurons, the influx <strong>of</strong><br />
calcium specifically through the LTCC Cav1.2<br />
causes the dephosphorylation <strong>of</strong> the transcription<br />
factor, NFATc4. The specificity <strong>of</strong> signaling in this<br />
system is maintained by direct association <strong>of</strong> A-<br />
kinase anchoring protein 79/150 (AKAP 79/150) with<br />
Cav1.2. AKAP79/150 anchors the calcium-sensitive<br />
phosphatase, calcineurin (CaN), near the channel<br />
where it is poised to respond to the calcium that is<br />
coming through the pore and subsequently<br />
dephosphorylate NFATc4. We have made<br />
constructs consisting <strong>of</strong> AKAP79/150 that is tethered<br />
to CaN by a glycine linker. This construct can be<br />
made so that the endogenous CaN is no longer<br />
anchored and is replaced by the tethered CaN. In<br />
this way, diffusion <strong>of</strong> activated CaN away from the<br />
channel is restricted and the location <strong>of</strong> NFATc4<br />
dephosporylation can be determined. Our goal is to<br />
establish that the tethered construct functions<br />
properly by measuring its direct affects on the<br />
channel. Proper CaN-dependent modulation <strong>of</strong><br />
calcium current will indicate that the construct may<br />
be a useful tool to study NFATc4 dephosphorylation.<br />
52<br />
<strong>2009</strong> Research and Creative Activities Symposium
Graduate Students<br />
Ensuring Educational Continuity<br />
for First Generation College<br />
Students<br />
Sajit Kabadi, E.D.L.I, DC - School <strong>of</strong> Education and<br />
Human Development<br />
Faculty Sponsor: Dr. Sheila Shannon, DC - School<br />
<strong>of</strong> Education and Human Development<br />
Activity Type: Graduate Research<br />
Abstract In accordance with the increasing number<br />
<strong>of</strong> first generation college students there is a need<br />
for more awareness, attention, and action to take<br />
place to further address the challenges facing many<br />
<strong>of</strong> these students in successfully acquiring a college<br />
degree. This must be perceived as an ongoing<br />
process that takes into serious consideration the<br />
quality <strong>of</strong> education these students receive at the<br />
elementary and secondary level leading up to<br />
college. By establishing collaborative opportunities,<br />
like the Regis <strong>University</strong>/Arrupe Jesuit High School<br />
Partnership, educational institutions can address the<br />
needs <strong>of</strong> first gen students most effectively and<br />
efficiently by maintaining the educational continuity<br />
so needed for many <strong>of</strong> these students in their<br />
educational journeys. Forming these types <strong>of</strong><br />
educational partnerships can promote this<br />
educational continuity for first gen students is the<br />
conceptual framework from which first generation<br />
college student experiences will be explored at this<br />
symposium.<br />
Using Targeted Proteomics to<br />
Assess the Impact <strong>of</strong> Sirtuins on<br />
Liver Metabolism in Obesity<br />
Aga Kendrick, Chemistry, DC - College <strong>of</strong> Liberal<br />
Arts and Sciences<br />
Faculty Sponsor: Dr. Karen Jonscher, AMC -<br />
School <strong>of</strong> Medicine<br />
Activity Type: Graduate Research<br />
Using targeted proteomics to assess the impact <strong>of</strong><br />
sirtuins on liver metabolism in obesity Agnieszka<br />
Kendrick, Mahua Choudhury, Mizanoor Rahman,<br />
Jed Friedman and Karen R. Jonscher Sirtuins (SirT)<br />
are NAD-dependent deacetylases that, in caloricrestricted<br />
models, have been linked to extended<br />
lifespan. SirT1 deacetylates transcription factors and<br />
increased activity is consistent with global effects on<br />
energy metabolism, especially gluconeogenesis and<br />
lipogenesis. Here we investigate the consequences<br />
<strong>of</strong> SirT activity in a model <strong>of</strong> obesity. Livers from<br />
mice fed either control or high fat diet were<br />
harvested and homogenized. SirT1 and 3 levels and<br />
activity were measured in cell lysates by Western<br />
blot and fluorescence assays. Proteins modified by<br />
lysine acetylation were immunoprecipitated with antiacetyllysine<br />
antibody; they were then separated by<br />
one dimensional gel electrophoresis and identified<br />
using tandem mass spectrometry. Changes in<br />
concentration and acetylation <strong>of</strong> identified proteins<br />
were further investigated using immunoaffinity<br />
techniques. Mice on the HF diet became obese, with<br />
fatty livers and increased protein acetylation. Most<br />
identified proteins were mitochondrial, with important<br />
roles in cellular metabolism. Others are involved in<br />
redox and stress responses. Acetylation <strong>of</strong> these<br />
proteins could impact their function, influencing the<br />
ability <strong>of</strong> obese mice to modulate oxidative stress,<br />
gluconeogenesis and lipogenesis.<br />
<strong>2009</strong> Research and Creative Activities Symposium 53
Graduate Students<br />
Molecular Pr<strong>of</strong>iling <strong>of</strong> Bacterial<br />
Communities Associated with<br />
Mining Impacted Sediments<br />
Matthew Kester, Biology, DC - College <strong>of</strong> Liberal<br />
Arts and Sciences<br />
Faculty Sponsor: Dr. Timberley Roane, DC -<br />
College <strong>of</strong> Liberal Arts and Sciences<br />
Activity Type: Graduate Research<br />
Throughout <strong>Colorado</strong>’s history, mining activities<br />
have played a key role in the state’s development.<br />
We are only now understanding the impact that<br />
mining activities have on our environment. Our work<br />
employs a multi-tiered approach to assessing the<br />
functionality <strong>of</strong> microbial community structure as an<br />
indicator <strong>of</strong> significant metal toxicity. Due to the<br />
intimate relationship that microorganisms have with<br />
their environment, microbial community composition<br />
<strong>of</strong>fers unique insight into the overall ecological<br />
impacts <strong>of</strong> metal contamination on aquatic<br />
sediments. This investigation uses molecular<br />
methodologies such as denaturing gradient gel<br />
electrophoresis (DGGE), cloning, and Phylochip<br />
bacterial microarrays to provide data suggesting<br />
distinct microbial communities are present in metal<br />
impacted versus un-impacted study sites. Analysis<br />
<strong>of</strong> the readily exchangeable metal content <strong>of</strong> the<br />
impacted sediments revealed ppm or ppb levels <strong>of</strong><br />
many metals such as Cu, Pb, and Zn. Initial<br />
molecular identification has determined members <strong>of</strong><br />
the bacterial families Acidobacteriaceae and<br />
Desulfovibrionaceae, and members <strong>of</strong> the class<br />
Cyanobacteria associated with the study sites.<br />
Moreover, the presence <strong>of</strong> Archaea bacteria has<br />
contributed to observed diversity differences among<br />
the metal-impacted sediments. Reliable microbial<br />
community pr<strong>of</strong>iles predictive <strong>of</strong> metal-contamination<br />
will provide greater use <strong>of</strong> microorganisms as<br />
indicators <strong>of</strong> metal toxicity in aquatic sediments.<br />
Technology Training <strong>of</strong> Internal<br />
Auditors: Impact <strong>of</strong> Advanced<br />
Feature Technology<br />
Hyo-Jeong Kim, CSIS, DC - Business School<br />
Faculty Sponsor: Dr. Michael Mannino, DC -<br />
Business School<br />
Activity Type: Graduate Research<br />
Although various information technologies have<br />
been studied with training research, the study <strong>of</strong><br />
specific technology features for pr<strong>of</strong>essional groups<br />
employing information technologies such as internal<br />
auditors (IA) has been limited. To address this gap, I<br />
extend IT training research with technology features<br />
among IA pr<strong>of</strong>essionals and test the model using a<br />
sample <strong>of</strong> internal auditors provided by the Institute<br />
<strong>of</strong> Internal Auditors (IIA). This study tests the effect<br />
<strong>of</strong> advanced feature training on perceived<br />
usefulness, perceived <strong>of</strong> ease <strong>of</strong> use, system usage,<br />
computer self-efficacy, and performance at both<br />
feature and s<strong>of</strong>tware level. I expect that the<br />
advanced feature training increases perceived<br />
usefulness, perceived ease <strong>of</strong> use, and computer<br />
self-efficacy at both feature and s<strong>of</strong>tware level, and<br />
increases the performance <strong>of</strong> audit tasks. Advanced<br />
feature training is expected to have more influence<br />
on perceived ease <strong>of</strong> use than perceived usefulness<br />
and have more effect on feature acceptance and<br />
feature self-efficacy than s<strong>of</strong>tware acceptance and<br />
s<strong>of</strong>tware self-efficacy. I also expect that feature<br />
acceptance and feature self-efficacy is positively<br />
associated with s<strong>of</strong>tware acceptance and s<strong>of</strong>tware<br />
self-efficacy.<br />
54<br />
<strong>2009</strong> Research and Creative Activities Symposium
Graduate Students<br />
Use <strong>of</strong> NMR to Define CR2:C3d<br />
Interactions in Solution Reveals<br />
Dual SCR1-2 Interface with C3d:<br />
Confirmation Using a Novel<br />
Ligand-Selective Inhibitory Peptide<br />
James Kovacs, Biomolecular Structure, AMC -<br />
Graduate School<br />
Faculty Sponsor: Dr. V. Michael Holers, AMC -<br />
School <strong>of</strong> Medicine<br />
Activity Type: Graduate Research<br />
Complement receptor 2 (CR2) is a cell membrane<br />
protein, with 15 or 16 extracellular short consensus<br />
repeats (SCRs), that promotes B cell responses and<br />
bridges innate and acquired immunity. SCRs 1 and<br />
2 mediate the interaction <strong>of</strong> CR2 with its four known<br />
ligands (C3d, EBV gp350, IFN-alpha, CD23).<br />
Inhibitory mAbs against SCR1-2 block binding <strong>of</strong> all<br />
ligands. To develop ligand-specific inhibitors that<br />
would also assist in identifying residues unique to<br />
each receptor-ligand interaction, phage were<br />
selected from random libraries by panning with<br />
recombinant SCR1-2, followed by specific liganddriven<br />
elution. Derived peptides were tested by<br />
competition ELISA. One peptide, C3dp1, exhibited<br />
ligand specific inhibition at mid-micromolar IC50.<br />
C3d was titrated into 15N labeled SCR1-2, which<br />
revealed chemical shift changes indicative <strong>of</strong><br />
specific inter-molecular interactions. Chemical shift<br />
changes were mapped onto the crystal structure <strong>of</strong><br />
SCR1-2. With regard to C3d, the binding surface<br />
includes regions <strong>of</strong> SCR1, SCR2 and the inter-SCR<br />
linker. SCR1 and SCR2 demonstrated distinct<br />
binding modes. The CR2 binding surface<br />
incorporating SCR1 is inconsistent with a previous<br />
X-ray CR2-C3d co-crystal analysis, but consistent<br />
with other previous results. Titration with C3dp1<br />
yielded chemical shift overlapping with C3d,<br />
indicating that C3dp1 interacts at the same CR2 site<br />
as C3d.<br />
Quantitation <strong>of</strong> Energy Recovery<br />
Potential from Food Wastes Using<br />
Microbial Fuel Cells and<br />
Biochemical Methane Potential<br />
Assays<br />
Karen Kronoveter, Civil Engineering, DC - College<br />
<strong>of</strong> Engineering and Applied Science<br />
Faculty Sponsor: Dr. Zhiyong (Jason) Ren , DC -<br />
College <strong>of</strong> Engineering and Applied Science<br />
Activity Type: Graduate Research<br />
Organic residential solid wastes represent an<br />
abundant domestic resource capable <strong>of</strong> being<br />
microbially converted to valuable energy products:<br />
electricity, methane (CH4), and/or hydrogen. To<br />
characterize the energy recovery potential from<br />
different residential solid food wastes, samples were<br />
collected from the <strong>Denver</strong> International Airport,<br />
<strong>Denver</strong> Botanical Gardens, and the <strong>Colorado</strong><br />
Convention Center, characterized, and tested for<br />
electricity production in microbial fuel cells (MFCs)<br />
and methane production using biochemical methane<br />
potential (BMP) assays. Samples, as received (posthomogenization)<br />
reported COD concentrations<br />
ranging from 12,900 to 59,800 mg/L, total solids <strong>of</strong><br />
9-36%, and energy content <strong>of</strong> 7418 – 9028 BTU/lb<br />
(dry mass basis). Single chamber air-cathode MFCs<br />
were operated in fed-batch mode and fed with<br />
adjusted substrate concentration <strong>of</strong> 2,000 mg/L. The<br />
same concentration <strong>of</strong> simulated food waste and<br />
acetate were used in control reactors. Initial results<br />
showed sustainable power density from food wastes<br />
varied from 145 and 170 mW/m2, coupled with a<br />
COD reduction between 69 and 74%. Energy<br />
conversion efficiencies obtained were between 2.57<br />
and 8.67% for the food waste substrates and<br />
18.20% for the acetate MFC. BMP assays are<br />
currently being conducted to quantify the potential<br />
CH4 recovery utilizing the same evolved microbial<br />
strain and food waste substrates.<br />
<strong>2009</strong> Research and Creative Activities Symposium 55
Graduate Students<br />
Evaluating a Web-based Test<br />
Results System at an Urban STI<br />
Clinic<br />
Sarah Ling, MPH, epidemiology, AMC - <strong>Colorado</strong><br />
School <strong>of</strong> Public Health<br />
Faculty Sponsor: Dr. Cornelis Rietmeijer, AMC -<br />
<strong>Colorado</strong> School <strong>of</strong> Public Health<br />
Activity Type: Graduate Research<br />
Providing efficient STI results improves disease<br />
prognosis and decreases transmission. Several STI<br />
clinics have suggested that notifying patients <strong>of</strong> test<br />
results using online services may increase test result<br />
receipt and improve efficiency <strong>of</strong> clinic operations.<br />
This study evaluates an online test results system at<br />
an urban STI clinic using information from the STI<br />
clinic’s electronic medical record system and results<br />
<strong>of</strong> a regularly administered survey regarding reasons<br />
for patients accepting or declining the <strong>of</strong>fer to utilize<br />
online results. Online results were <strong>of</strong>fered starting on<br />
June 11th, 2008. Of the 6144 new patients visiting<br />
the clinic between December 2007 and December<br />
2008 who were not presumptively treated for<br />
chlamydia or gonorrhea on the day <strong>of</strong> the visit, the<br />
proportion <strong>of</strong> patients receiving results did not<br />
increase significantly after the implementation <strong>of</strong><br />
online results. However, the proportion <strong>of</strong> patients<br />
calling the clinic for results decreased significantly.<br />
Though <strong>of</strong>fering online results is not associated with<br />
improved results receipt, the new system appears to<br />
increase efficiency <strong>of</strong> clinic operations by reducing<br />
staff time spent answering phone calls pertaining to<br />
test results.<br />
Children’s Worldviews from China,<br />
Singapore and the United States:<br />
Implications for Research,<br />
Teaching and Learning in Science<br />
and Science Education<br />
Austine Luce, Environmental Education, DC -<br />
School <strong>of</strong> Education and Human Development<br />
Yawen Chang, Chinese equity, DC - School <strong>of</strong><br />
Education and Human Development<br />
Faculty Sponsor: Dr. Bryan Shao-Chang Wee, DC<br />
- School <strong>of</strong> Education and Human Development<br />
Activity Type: Graduate Research<br />
U.S. classrooms are becoming increasingly diverse<br />
with unprecedented demographic swings across<br />
ethnic groups in particular. The elicitation and<br />
application <strong>of</strong> students' everyday ideas in the<br />
curriculum can lead toward equity in the classroom<br />
by being inclusive <strong>of</strong> multiple viewpoints while<br />
concurrently enhancing conceptual scaffolding and<br />
learning. This paper, therefore, is intended to a)<br />
explore students’ everyday ideas about the<br />
environment across different countries (U.S.,<br />
Singapore and China), b) compare and contrast<br />
these ideas to highlight what students know and<br />
think about the environment, and c) initiate<br />
conversations regarding the implications <strong>of</strong> students’<br />
everyday ideas for teaching and learning in<br />
environmental education. Three main themes, built<br />
environments, poetry and harmony emerged from<br />
data analysis. In addition, students in this study<br />
conceptualized humans and human activities as part<br />
<strong>of</strong> the environment. The students’ views <strong>of</strong> the<br />
environment support the idea that socio-cultural<br />
settings play a critical role in learning.<br />
56<br />
<strong>2009</strong> Research and Creative Activities Symposium
Graduate Students<br />
Motivational Interviewing in Skin<br />
Cancer Prevention<br />
Matthew Lugliani, MPH, AMC - <strong>Colorado</strong> School <strong>of</strong><br />
Public Health<br />
Faculty Sponsor: Dr. Robert Dellavalle, AMC -<br />
School <strong>of</strong> Medicine<br />
Activity Type: Graduate Research<br />
A 39 year old female, who presents with a benign<br />
skin lesion, reveals her concern about skin cancer,<br />
but is resistant to using sunscreen. We illustrate in<br />
the accompanying video two behavioral<br />
interventions the physician can use. The first<br />
demonstrates traditional direct advice, which may<br />
not always have the desired behavioral outcome.<br />
The second technique utilizes Motivational<br />
Interviewing (MI), which is a patient centered<br />
counseling style that works by creating ambivalence<br />
about a specific behavior. In our example, instead <strong>of</strong><br />
telling the patient that she should start using<br />
sunscreen, which occurs with traditional direct<br />
advice, the physician works with the patient to<br />
understand why not using sunscreen is important to<br />
the patient, the reasons behind the behavior, and<br />
what the patient knows or does not know about skin<br />
cancer. The primary goal <strong>of</strong> MI is to inspire patients<br />
to elicit their own reasons to change. In practicing<br />
motivational interviewing, the physician attempts to<br />
develop a supportive relationship with the patient, to<br />
avoid lecturing or argument, and to generate<br />
ambivalence through the use <strong>of</strong> open-ended<br />
questions, reflective listening, and summarizations.<br />
The challenge for the physician is formulating<br />
questions that tip the ambivalence toward positive<br />
change.<br />
Voluntary Environmental<br />
Programs and Policy Issues<br />
Laurie Manderino, Public Affairs, DC - School <strong>of</strong><br />
Public Affairs<br />
Faculty Sponsor: Dr. Peter deLeon , DC - School<br />
<strong>of</strong> Public Affairs<br />
Activity Type: Graduate Research<br />
Environmental improvements on the part <strong>of</strong> industry<br />
<strong>of</strong>ten result from government regulations that<br />
“command” certain action on the part <strong>of</strong> industry and<br />
then “control” how well they perform. An alternative<br />
approach is Voluntary Environmental Agreements<br />
(VEP), where firms voluntarily commit to make<br />
certain environmental improvements individually, as<br />
part <strong>of</strong> an industry association, or under the<br />
guidance <strong>of</strong> a government entity. For example, many<br />
new initiatives targeted towards climate change<br />
originate from companies that voluntarily commit to<br />
reduce their carbon output or “footprint.” This<br />
presentation will provide an overview <strong>of</strong> current<br />
research on VEPS, looking at issues such as: what<br />
motivates firms to participate, how a VEP structure<br />
impacts its efficiency and credibility with<br />
stakeholders (regulators, consumers, suppliers,<br />
etc.), who monitors compliance <strong>of</strong> participants, how<br />
firm environmental performance over time compares<br />
with VEP commitments, how individual firms may<br />
benefit from VEP participation and labeling<br />
themselves “green,” and whether this sends an<br />
accurate message to the public in all cases. Also<br />
discussed are the particular considerations for VEPs<br />
in developing countries, where information flows and<br />
regulatory oversight capacities may differ from the<br />
US.<br />
<strong>2009</strong> Research and Creative Activities Symposium 57
Graduate Students<br />
Individual Differences in Cocaine<br />
Responsiveness Predict<br />
Motivation to Self-Administer<br />
Cocaine in Male Sprague-Dawley<br />
Rats<br />
Bruce Mandt, Pharmacology, AMC - Graduate<br />
School<br />
Faculty Sponsor: Dr. Nancy Zahniser, AMC -<br />
School <strong>of</strong> Medicine<br />
Activity Type: Graduate Research<br />
Rational: Factors that increase an individual's<br />
susceptibility to cocaine dependence remain largely<br />
unknown. We have previously shown that male<br />
Sprague-Dawley rats can be classified as either low<br />
or high cocaine responders (LCRs or HCRs,<br />
respectively) based on their locomotor response to a<br />
single dose <strong>of</strong> cocaine (10 mg/kg, i.p.). Further,<br />
LCR/HCR classification predicts dopamine<br />
transporter function/inhibition, cocaine-induced<br />
locomotor sensitization, and cocaine conditioned<br />
place preference. Objectives: The present study<br />
assessed LCR/HCR classification and the<br />
development <strong>of</strong> locomotor sensitization on<br />
acquisition <strong>of</strong> and motivation to self-administer<br />
cocaine. Results: LCRs/HCRs did not differ in<br />
acquisition <strong>of</strong> cocaine self-administration. In a followup<br />
experiment, repeated intermittent injections <strong>of</strong><br />
cocaine resulted in locomotor sensitization for LCRs,<br />
but not HCRs; nonetheless, all rats more readily<br />
acquired cocaine self-administration compared to<br />
the first experiment. Repeated cocaine pre-exposure<br />
and LCR/HCR classification predicted break point<br />
when rats responded for cocaine under a<br />
progressive ratio (PR) schedule <strong>of</strong> reinforcement,<br />
but there was no interaction between these<br />
variables. Conclusions: Although LCR/HCR<br />
classification did not predict acquisition <strong>of</strong> cocaine<br />
self-administration under present conditions, LCR<br />
rats demonstrated greater responding for cocaine<br />
after acquisition (PR). Thus, these findings<br />
demonstrate the relevance <strong>of</strong> using the LCR/HCR<br />
distinction as a model when studying susceptibility to<br />
cocaine dependence.<br />
Analyzing Accessibility to Forest<br />
Areas in Mexico<br />
Susan McPartland, Society and the Environment,<br />
DC - College <strong>of</strong> Liberal Arts and Sciences<br />
Faculty Sponsor: Dr. Rafael Moreno-Sanchez, DC<br />
- College <strong>of</strong> Liberal Arts and Sciences<br />
Activity Type: Graduate Creative Activity<br />
Anthropogenic events such as logging, agriculture<br />
and the expanding human population influence<br />
forest fragmentation which severely hinders a forest<br />
ecosystem’s ability to thrive. Previous studies have<br />
determined the level and extent <strong>of</strong> forest<br />
fragmentation in Mexico. This project aims to test<br />
how accessibility to forest areas relates to changes<br />
in extent and fragmentation. Changes will be found<br />
through a comparison between forest areas in the<br />
1980s and the early 2000s. Accessibility will be<br />
considered with the factors <strong>of</strong> slope, roads<br />
anthropogenic uses. These factors will be used to<br />
create a friction surface from which the influences <strong>of</strong><br />
accessibility will be evaluated. Understanding the<br />
spatial patterns <strong>of</strong> forests in Mexico is vital for<br />
effective decision making. The results <strong>of</strong> this project<br />
have the potential to facilitate biologists, foresters<br />
and other stakeholders in the identification and thus<br />
effective conservation <strong>of</strong> fragmented forests.<br />
58<br />
<strong>2009</strong> Research and Creative Activities Symposium
Graduate Students<br />
Bureaucratic Entrepreneurship in<br />
Education: Case Study<br />
Scott Mendelsberg, DC - School <strong>of</strong> Public Affairs<br />
Rrobin Phelps, DC - School <strong>of</strong> Public Affairs<br />
Faculty Sponsor: Dr. Paul Teske, DC - School <strong>of</strong><br />
Public Affairs<br />
Activity Type: Graduate Research<br />
Public sector entrepreneurship has become a more<br />
frequent topic <strong>of</strong> research and focus <strong>of</strong> practice.<br />
Within education it is a sought after, needed, but<br />
<strong>of</strong>ten missing solution to the numerous challenges<br />
within all aspects <strong>of</strong> the education system. Yet, as a<br />
strategy and tactic, bureaucratic entrepreneurship in<br />
education (BEE) seems lost on policy makers,<br />
legislators, the numerous blue ribbon committees,<br />
principals and teachers empowered to improve<br />
educational effectiveness. In his landmark book “The<br />
Forging <strong>of</strong> Bureaucratic Autonomy”, Daniel P.<br />
Carpenter uses historical case study analysis to<br />
highlight bureaucratic entrepreneurship in executive<br />
agencies as varied as the Post Office to Department<br />
<strong>of</strong> Interior. In this study we analyze the development<br />
<strong>of</strong> the College Now program at Abraham Lincoln<br />
High School in <strong>Denver</strong>, <strong>Colorado</strong> using Carpenter’s<br />
theory <strong>of</strong> bureaucratic autonomy. <strong>Colorado</strong> has the<br />
unique problem <strong>of</strong> having the highest educated<br />
workforce in the country, yet it sends the lowest<br />
percentage <strong>of</strong> its own high school students to<br />
college. College Now was a solution to address this<br />
“<strong>Colorado</strong> Paradox”. By applying Carpenter’s theory<br />
to a state educational institution this research<br />
contributes to the bureaucratic autonomy theory in<br />
addition to providing an actionable model to inform<br />
education policymakers.<br />
Re-Imagining Healing and<br />
Childbirth: Visual Narratives in<br />
Complementary and Alternative<br />
Medicine<br />
Katherin Mullin, Medical Anthropology, DC -<br />
College <strong>of</strong> Liberal Arts and Sciences<br />
Faculty Sponsor: Dr. Marty Otanez, DC - College<br />
<strong>of</strong> Liberal Arts and Sciences<br />
Activity Type: Graduate Research<br />
This study examines the visual narrative <strong>of</strong> a twentyfour<br />
year old woman reflecting on teen-pregnancy<br />
and self-transformation through natural birth. Visual<br />
narrative is a critical methodological device in the<br />
anthropology <strong>of</strong> complementary and alternative<br />
medicine. Narrative is a scheme that makes<br />
meaning <strong>of</strong> one’s experiences and reveals an<br />
individual’s healing work. Visual narrative, imagery<br />
such as video or photographs, illuminates individuals<br />
and voices that are marginalized in the dominant<br />
discourse <strong>of</strong> health. The project, Healing Through<br />
Natural Birth, employs visual narrative analysis to<br />
assess the components <strong>of</strong> a natural child birth story<br />
and promoting complementary and alternative<br />
medicine. Complementary and alternative modalities<br />
create a transformation in an individual’s<br />
understanding <strong>of</strong> health and wellness. Narrative<br />
facilitates and reveals the transformation that<br />
centrally occurs in integrative healing. This study<br />
shows Allie∗, the birth mother, reflecting on her<br />
conflicted adolescence, unexpected pregnancy, and<br />
natural birth, narrating a healing plot that culminates<br />
in a “realization” <strong>of</strong> Self. Her digital story re-imagines<br />
birth as both a biomedical and metaphysical journey<br />
<strong>of</strong> transformation, existing simultaneously within and<br />
outside <strong>of</strong> Western biomedicine. Digital stories are<br />
critical methodology in communicating silenced<br />
situated knowledges, sharing with the public ways to<br />
modify health care. This study explored digital<br />
media’s capability for co-collaboration between<br />
researcher and narrator, using play-back to coanalyze<br />
selected narrative excerpts.<br />
<strong>2009</strong> Research and Creative Activities Symposium 59
Graduate Students<br />
Neonatal Resuscitation Capacity in<br />
Nepal<br />
Christina Nelson, Epidemiology, AMC - <strong>Colorado</strong><br />
School <strong>of</strong> Public Health<br />
Faculty Sponsor: Dr. Carolyn DiGuiseppi, AMC -<br />
<strong>Colorado</strong> School <strong>of</strong> Public Health<br />
Activity Type: Graduate Research<br />
Perinatal asphyxia is a major contributor to the<br />
nearly 4 million neonatal deaths occurring worldwide<br />
each year in resource-limited settings. Neonatal<br />
resuscitation is a proven method for preventing<br />
newborn deaths. There are few published data<br />
describing neonatal resuscitation capacity in Nepal,<br />
where neonatal mortality rates are high. We<br />
evaluated neonatal resuscitation capacity at<br />
seventeen birth centers in urban and rural Nepal.<br />
Assessments included standardized interviews <strong>of</strong><br />
healthcare workers and evaluation <strong>of</strong> newborn<br />
resuscitation areas. The availability <strong>of</strong> essential<br />
resuscitation tools was also recorded. Eleven <strong>of</strong> the<br />
17 health centers conducted deliveries on-site. Of<br />
those, 45% had posted resuscitation algorithms,<br />
72% had infant warmers, 36% had bulb suctions,<br />
91% had mechanical suction machines, and 82%<br />
had BMV devices available. Tertiary hospitals were<br />
much better equipped compared with smaller health<br />
centers. None <strong>of</strong> the healthcare workers who<br />
attended home deliveries had algorithms, warming<br />
devices, suction, or BMV devices available.<br />
Neonatal resuscitation cannot be adequately<br />
performed without essential equipment. Availability<br />
<strong>of</strong> appropriate resuscitation supplies was variable in<br />
health centers providing delivery services on-site<br />
and was severely deficient among health staff<br />
attending to home deliveries. In addition to training<br />
programs, distribution <strong>of</strong> neonatal resuscitation<br />
equipment is a critical priority in this region <strong>of</strong> Nepal.<br />
The Power <strong>of</strong> Words<br />
Linda Ngo, Biology, DC - College <strong>of</strong> Liberal Arts and<br />
Sciences<br />
Rubina Pradha, Biology, DC - College <strong>of</strong> Liberal<br />
Arts and Sciences<br />
Brittany Chessman, Environmental Science, DC -<br />
College <strong>of</strong> Liberal Arts and Sciences<br />
Craig Dreiling, Biology, DC - College <strong>of</strong> Liberal Arts<br />
and Sciences<br />
Faculty Sponsor: Dr. Rakissa Cribari, DC - College<br />
<strong>of</strong> Liberal Arts and Sciences<br />
Activity Type: Undergraduate Research<br />
Pradha R, Chessman B, Dreiling C, Ngo L What is<br />
the power <strong>of</strong> words? Words can bring on emotions<br />
and stir feelings in humans, but do they have any<br />
affect on other living organisms such as<br />
houseplants? This research study was designed to<br />
determine if words would affect the number and<br />
length <strong>of</strong> roots <strong>of</strong> plant stems/leaves that were rerooted<br />
in water. Plant leaves were cut <strong>of</strong>f an ordinary<br />
houseplant and placed in vases <strong>of</strong> water. Various<br />
group members tested the effects <strong>of</strong> positive and<br />
negative written words that were attached to the<br />
plant vases versus vases with no words; while<br />
another group member tested the power <strong>of</strong> spoken<br />
words on root growth. In one case some plants that<br />
received the word “love” did not have root growth<br />
while the plants receiving the treatment <strong>of</strong> “hate”<br />
have roots. In another case the love treatment plants<br />
grew roots and the ones with no words grew roots<br />
but they were shorter. The plants tested with spoken<br />
words had root growth only with positive spoken<br />
words. The plant leaves treated with hate words<br />
versus no words have no growth at all. The<br />
experiment is ongoing but the hypothesis test will be<br />
conducted on the root growth in time for the<br />
presentation.<br />
60<br />
<strong>2009</strong> Research and Creative Activities Symposium
Graduate Students<br />
Dying Wish: A Documentary about<br />
Stopping Eating and Drinking at<br />
the End-<strong>of</strong>-Life<br />
Francesca Nicosia, Medical Anthropology, DC -<br />
College <strong>of</strong> Liberal Arts and Sciences<br />
Faculty Sponsor: Dr. Steven Koester, DC - College<br />
<strong>of</strong> Liberal Arts and Sciences<br />
Activity Type: Graduate Research<br />
Dying Wish is a documentary that follows a retired<br />
surgeon with end-stage cancer who chose to stop<br />
eating and drinking at the end <strong>of</strong> his life in order to<br />
hasten his natural dying process. Given the lack <strong>of</strong><br />
medical or anthropological research on “Voluntary<br />
Refusal <strong>of</strong> Food and Fluids,” this film raises<br />
important clinical, ethical and social issues for<br />
medicine and palliative care and provides an entry<br />
point for anthropological explorations <strong>of</strong> embodied<br />
subjectivities and sociality <strong>of</strong> pain and suffering and<br />
conceptions <strong>of</strong> “natural” death. As a case study, Dr.<br />
Miller’s death exposes structural possibilities and<br />
constraints surrounding issues <strong>of</strong> “choice” at the end<br />
<strong>of</strong> life. Dying Wish is situated at the intersection <strong>of</strong><br />
medicine, bioethics and culture and is being used as<br />
an educational tool by numerous hospices and<br />
palliative care organizations, universities and<br />
medical schools.<br />
Revealing Landscapes: Using Fire<br />
as a Design Element in Landscape<br />
Architecture<br />
Nieve Nielson, Landscape Architecture, DC -<br />
College <strong>of</strong> Architecture and Planning<br />
Faculty Sponsor: Austin Allen, DC - College <strong>of</strong><br />
Architecture and Planning<br />
Activity Type: Graduate Creative Activity<br />
Fire, as a natural element, can be embraced as a<br />
modern cultural means to shape a landscape and<br />
give it form, function, familiarity and flux. This<br />
concept was explored after an intimate study <strong>of</strong> an<br />
abandoned feral piece <strong>of</strong> land near the former<br />
Stapleton Airport in <strong>Denver</strong>, CO. A prescribed burn<br />
partnered with a mowed green break to contain the<br />
fire was proposed to reveal the inherent, embedded<br />
qualities <strong>of</strong> the land. It was predicted that a site<br />
implementation <strong>of</strong> rotating seasonal burns would<br />
unveil a variety <strong>of</strong> reactions, both ecological as well<br />
as cultural. Ecologically, the site would regenerate<br />
new plant growth lending a food source for grazing<br />
animals, nesting areas for a variety <strong>of</strong> birds, and<br />
cover for predatory species. Because the burns<br />
would take place during alternating times <strong>of</strong> the<br />
year, a mosaic motif <strong>of</strong> warm season grasses next to<br />
cool season grasses would also emerge. Culturally,<br />
this colorful planned patchwork pattern would invite<br />
human curiosity, captivation and recognition. The<br />
fire itself would attract people allowing for<br />
unorganized and regulated events alike. The spaces<br />
left after and before the burns would be inviting for<br />
educational outings, recreational purposes, as well<br />
as social gatherings.<br />
<strong>2009</strong> Research and Creative Activities Symposium 61
Graduate Students<br />
Long-term DBS Effects on<br />
Parkinson’s Disease Motor<br />
Symptoms Support<br />
Neuromodulation as the Possible<br />
Mechanism <strong>of</strong> Action <strong>of</strong> DBS<br />
Ligia On<strong>of</strong>rei, MD, AMC - School <strong>of</strong> Medicine<br />
Faculty Sponsor: Dr. Olga Klepitskaya, AMC -<br />
School <strong>of</strong> Medicine<br />
Activity Type: Graduate Research<br />
Background: Deep brain stimulation (DBS) is an<br />
effective treatment for motor symptoms associated<br />
with Parkinson disease (PD). The mechanism<br />
through which DBS works is largely unknown, but<br />
most likely includes chronic stimulation <strong>of</strong> inhibition<br />
<strong>of</strong> downstream signaling that is normally produced<br />
by STN. Although a largely symptomatic treatment,<br />
chronic DBS stimulation may produce long term<br />
adaptation in the basal ganglia- thalamo-cortical<br />
pathways, also known as neuromodulation. This<br />
effect can potentially change the natural course <strong>of</strong><br />
PD by slowing down its progression. Several<br />
anecdotal observations and case reports illustrate<br />
this concept. Objective: To review the literature for<br />
DBS outcomes in order to examine the long-term<br />
effect <strong>of</strong> DBS on the progression <strong>of</strong> PD as measured<br />
through UPDRS scores. Methods: PubMed was the<br />
primary search engine. UPDRS scores <strong>of</strong> subjects<br />
before treatment and either after treatment without<br />
stimulation for any length <strong>of</strong> time or after treatment<br />
and on stimulation after at least 3-5 years post<br />
surgery were analyzed. Conclusion: The data<br />
obtained indicates that the UPDRS scores have<br />
remained stable which is remarkable in this<br />
otherwise progressive neurodegenerative disorder.<br />
The stability <strong>of</strong> the UPDRS scores supports slow<br />
disease progression and the hypothesis <strong>of</strong><br />
neuromodulation or long-term adaptation produced<br />
by chronic STN DBS.<br />
Natural Disasters and Sustainable<br />
Livelihoods: Exploring Local<br />
Capacity in Tarija, Bolivia<br />
Kate Oviatt, Anthropology, DC - College <strong>of</strong> Liberal<br />
Arts and Sciences<br />
Faculty Sponsor: Dr. John Brett, DC - College <strong>of</strong><br />
Liberal Arts and Sciences<br />
Activity Type: Graduate Research<br />
The incorporation <strong>of</strong> natural hazards research into<br />
sustainable livelihood development approaches is<br />
essential if such development is to be effective.<br />
Rural populations with livelihoods based on<br />
agriculture are extremely vulnerable to the effects <strong>of</strong><br />
natural hazards. The effects from a single hazardous<br />
event can last years, significantly impacting<br />
livelihood strategies and security. The aim <strong>of</strong> this<br />
research is to integrate the fields <strong>of</strong> natural hazards<br />
research and sustainable livelihoods development<br />
frameworks to provide a more comprehensive<br />
understanding <strong>of</strong> challenges facing rural<br />
populations. Research was conducted in five rural<br />
communities in Tarija, Bolivia from June-August<br />
2008 in partnership with a Bolivian NGO and local<br />
governments. Qualitative methods allowed<br />
exploration <strong>of</strong> local experiences and perceptions <strong>of</strong><br />
natural hazards, and identified issues <strong>of</strong><br />
vulnerability, those factors that increase a<br />
population’s exposure to disaster risk, and capacity,<br />
the strengths and resources that increase a<br />
population’s ability to withstand the effects <strong>of</strong><br />
disaster. Participants discussed their strategies for<br />
coping with natural hazard events and the social,<br />
economic, and geographic factors that influenced<br />
and <strong>of</strong>ten limited their ability to cope. Discussions<br />
revealed an intimate relationship between<br />
hazardous events and livelihood security, and<br />
identified a number <strong>of</strong> points <strong>of</strong> articulation between<br />
exposure to hazards and sustainable development.<br />
62<br />
<strong>2009</strong> Research and Creative Activities Symposium
Graduate Students<br />
Racial/ethnic and Socioeconomic<br />
Differences in Five-Year Cancer<br />
Survival in <strong>Colorado</strong>, 1999-2002<br />
Alma Palisoc, Public Health, AMC - <strong>Colorado</strong><br />
School <strong>of</strong> Public Health<br />
Faculty Sponsor: Sara Miller, Public Affairs, DC -<br />
School <strong>of</strong> Public Affairs<br />
Dr. Tim Byers, AMC - <strong>Colorado</strong><br />
School <strong>of</strong> Public Health<br />
Activity Type: Graduate Research<br />
Both race/ethnicity and socioeconomic status (SES)<br />
are important factors leading to later stage cancer<br />
diagnosis and poorer outcomes. The purpose <strong>of</strong> this<br />
study is to describe differences in cancer survival in<br />
<strong>Colorado</strong> by both race/ethnicity and SES during the<br />
years 1999 to 2002. We examined data from the<br />
<strong>Colorado</strong> Central Cancer Registry in the <strong>Colorado</strong><br />
Department <strong>of</strong> Public Health and Environment to<br />
compare five-year cancer survival among<br />
Coloradans diagnosed with all cancers combined<br />
and cancers <strong>of</strong> the breast, colon/rectum, lung, or<br />
prostate across different racial/ethnic groups and<br />
SES. Five-year cancer survival for all cancers<br />
combined was lower among Hispanics (58%) and<br />
blacks (58%) than among non-Hispanic whites<br />
(65%). Lower survival was observed among those<br />
from the lowest SES groups than among the higher<br />
SES groups (54% vs. 68%). Within each<br />
racial/ethnic group, those from the lowest SES<br />
groups were less likely to survive five years after<br />
diagnosis than were those from the higher SES<br />
groups. Similar findings were seen for specific<br />
cancer sites. Surveillance should concentrate on<br />
both race/ethnicity and SES as factors defining<br />
cancer disparities.<br />
<strong>2009</strong> Research and Creative Activities Symposium 63
Graduate Students<br />
Divergence between CRT Non-<br />
Responder Rates Based on the<br />
NYHA Class Assessment and 6-<br />
Minute Hall Walk Distance Criteria:<br />
Results from the Response-HF<br />
Trial<br />
Lindsay Reardon, MD Program, AMC - School <strong>of</strong><br />
Medicine<br />
Faculty Sponsor: Dr. Michelle Khoo, UCH Cardiac<br />
and Vascular Center - Electrophysiology Lab<br />
either no change in NYHA class or < 10% increase<br />
in 6-MHWD, the NR rate was consistent with<br />
previous clinical trials. However, there was<br />
discordance <strong>of</strong> agreement between responder status<br />
determined by NYHA class and 6-MHWD in 105<br />
(27%) patients. Conclusion: The NR rate based on<br />
the combined end point was lower than that reported<br />
in previous CRT trials. The disagreement between<br />
the responder statuses based on subjective and<br />
objective criterion was high. The response to CRT at<br />
early follow-up should include combined assessment<br />
<strong>of</strong> changes in NYHA class and 6-MHWD to<br />
determine functional status that may be important for<br />
CRT trials.<br />
Activity Type: Undergraduate Research<br />
Divergence between CRT non-responder rates<br />
based on the NYHA class assessment and 6-minute<br />
hall walk distance criteria: Results from the<br />
Response-HF trial 1Lindsay Reardon, 1Royce<br />
Bargas, DO, 1Elizabeth Coogan, 2Raul Weiss, MD,<br />
3Rajesh Malik, MD, 4Marc Wish, MD, 5Abdul<br />
Alawwa, MD, 6Jay Dinerman, MD, 7Kevin Hsu, MD,<br />
8Alan Waggoner, MHS, 9Ashish Oza, MS, 1Michelle<br />
Khoo, MD. 1Ohio State <strong>University</strong>, Columbus, OH,<br />
2<strong>University</strong> <strong>of</strong> <strong>Colorado</strong>, <strong>Denver</strong>, CO, 3PeeDee<br />
Cardiology Associates, Florence, SC, 4Inova Fairfax<br />
Hospital, Falls Church, VA, 5Cardiology Consultants<br />
<strong>of</strong> East Michigan, Lapeer, MI, 6The Heart Center,<br />
Huntsville, AL, 7Presbyterian Hospital, Charlotte,<br />
NC, 8Washington <strong>University</strong>, St. Louis, MO, 9St.<br />
Jude Medical, Sylmar, CA. Introduction: Previous<br />
clinical trials have reported a CRT non-responder<br />
(NR) rate <strong>of</strong> 25-30%. However, most studies used<br />
only one criterion to classify a NR (either<br />
improvement in NYHA class or exercise capacity). In<br />
Response-HF trial, the NR rate to CRT is based on<br />
the combined criteria <strong>of</strong> NYHA class and 6-minute<br />
hall walk distance (6-MHWD). The goal <strong>of</strong> this<br />
analysis was to determine the CRT NR rate using<br />
these combined criteria. Methods: 403 pts (72%<br />
male, age 67 ± 11.3 years, LVEF 24 ± 7.6%)<br />
enrolled in the Response-HF trial underwent NYHA<br />
class assessment and 6-MHW test. After device<br />
implant, the AV delay was optimized and all pts were<br />
programmed to simultaneous CRT pacing. At the 3<br />
month follow-up, NYHA class and 6-MHWD were<br />
reassessed. A non-responder to CRT was defined<br />
as no improvement or worsening NYHA class and<br />
Graduate Students<br />
Challenging the Past:<br />
Transformation Through Problem<br />
Focused Field Schools<br />
Jordan Reck, Anthropology, DC - College <strong>of</strong> Liberal<br />
Arts and Sciences<br />
Teresa Cochran, Anthropology, DC - College <strong>of</strong><br />
Liberal Arts and Sciences<br />
David Schutz, Anthropology, DC - College <strong>of</strong> Liberal<br />
Arts and Sciences<br />
Drew Zackary, Anthropology, DC - College <strong>of</strong><br />
Liberal Arts and Sciences<br />
Faculty Sponsor: Dr. John Brett, DC - College <strong>of</strong><br />
Liberal Arts and Sciences<br />
Activity Type: Graduate Research<br />
A new paradigm <strong>of</strong> collaboration, participation and<br />
action is emerging in anthropological research. Field<br />
work and participation are bedrocks <strong>of</strong><br />
anthropological research but new approaches to<br />
research methods training challenge standard<br />
models <strong>of</strong> the solitary researcher through field<br />
schools. A new emphasis on group experiential<br />
learning is at the heart <strong>of</strong> the UCD Anthropology<br />
program in Ecuador. Field school models include<br />
instructor-driven, applied anthropology, study-tour,<br />
and problem-focused. The UCD anthropology field<br />
school conducts original ethnographic research in<br />
collaboration with students and faculty at the<br />
Yachana Technical High School in the Amazonian<br />
community <strong>of</strong> Mondaña, Ecuador. As student<br />
participants in the 2008/<strong>2009</strong> field school we<br />
advocate for the strength <strong>of</strong> the problem-focused<br />
collaborative model. Its superiority is evidenced in<br />
the transformation <strong>of</strong> student knowledge and<br />
awareness through the integration <strong>of</strong> theory and<br />
methods in field-based research as well as the<br />
application <strong>of</strong> broad skill sets not available through<br />
classroom experience. The motto at Yachana is<br />
“Living Your Education” where academic and<br />
technical skills are combined through the curriculum<br />
to produce the best educational experience possible.<br />
We argue based on our experience that this same<br />
goal <strong>of</strong> academic excellence can be met through the<br />
use <strong>of</strong> problem-focused field schools.<br />
A Probabilistic Neural Network<br />
using the Haralick Transform to<br />
Segment Ribs in Chest Digital<br />
Radiographs<br />
Shoshana Rosskamm, Applied Mathematics, DC -<br />
Graduate School<br />
Faculty Sponsor: Mr. Francis Newman, AMC -<br />
School <strong>of</strong> Medicine<br />
Activity Type: Graduate Research<br />
We use a probabilistic neural network (PNN) and<br />
selected components <strong>of</strong> the Haralick transform as a<br />
feature vector to train our neural network in this<br />
segmentation task. A Haralick transform composed<br />
<strong>of</strong> statistical components is employed as a feature<br />
vector where the relevance <strong>of</strong> each component to<br />
the particular task is determined using a simple<br />
scatter plot analysis. Training sets for rib and non-rib<br />
regions are generated by randomly selecting pixels<br />
around which a 16 by 16 pixel region <strong>of</strong> interest<br />
(ROI) is constructed. The Haralick transform is<br />
applied to this ROI as a feature vector characterizing<br />
the region. Once the components from the scatter<br />
plot analysis are selected, the Haralick transform is<br />
applied. The method is automated in that each pixel<br />
in the image is interrogated and classified by the<br />
PNN. The PNN performs well with 50 training<br />
vectors each from rib and non-rib areas. There are<br />
typically 7 relevant Haralick components after scatter<br />
plot analysis. We demonstrate the effectiveness <strong>of</strong><br />
the method with images that show rib segmentation<br />
on two different patients using the same Haralick<br />
components and PNN. Consequently, the same<br />
features and PNN appear to be applicable to<br />
different patients’ images.<br />
<strong>2009</strong> Research and Creative Activities Symposium 65
Graduate Students<br />
Social Construction and Policy<br />
Design Framework: Analysis <strong>of</strong><br />
Current Applications<br />
Kristin Schumacher, DC - School <strong>of</strong> Public Affairs<br />
Jonathan Pierce, DC - School <strong>of</strong> Public Affairs<br />
Saba Siddiki, DC - School <strong>of</strong> Public Affairs<br />
Andrew Pattison, DC - School <strong>of</strong> Public Affairs<br />
Faculty Sponsor: Dr. Chris Weible, DC - School <strong>of</strong><br />
Public Affairs<br />
Activity Type: Graduate Research<br />
One <strong>of</strong> the leading lenses for understanding the<br />
policy process is the social construction framework<br />
as developed by Schneider and Ingram (1993, 1997,<br />
2005, 2007). The social construction framework<br />
incorporates the social construction <strong>of</strong> knowledge<br />
and/or <strong>of</strong> target populations in conjunction with<br />
classical notions <strong>of</strong> political power to understand the<br />
creation and implications <strong>of</strong> policy design. The<br />
purpose <strong>of</strong> this paper is to explore existing<br />
applications <strong>of</strong> the social construction framework. In<br />
order to do so, this paper summarizes the results <strong>of</strong><br />
a systematic review <strong>of</strong> articles that have used the<br />
framework in an empirical inquiry from 1993 through<br />
2008. Coded items include substantive policy<br />
domain addressed, method <strong>of</strong> data collection, cited<br />
strengths and weaknesses <strong>of</strong> the framework, and<br />
how key elements <strong>of</strong> the theory were conceptualized<br />
and operationalized. The results indicate that (i) a<br />
majority <strong>of</strong> applications have used qualitative<br />
research methods; (ii) authors conceptualize and<br />
operationalize central concepts in the theory<br />
differently; (iii) the framework is applied mostly to<br />
agenda setting and policy design and rarely to other<br />
stages <strong>of</strong> the policy process; and, (iv) to date, the<br />
research has yet to generate a series <strong>of</strong> testable<br />
hypotheses. The paper concludes with<br />
recommendations for future research.<br />
Phosphatidic Acid Induced<br />
Membrane Depolarization Via<br />
Activation <strong>of</strong> Intracellular Calcium<br />
Dependant Chloride Channels in<br />
Xenopus leavis oocytes<br />
Joshua Snyder, Biology, DC - College <strong>of</strong> Liberal<br />
Arts and Sciences<br />
Shilo Smith, Biology, DC - College <strong>of</strong> Liberal Arts<br />
and Sciences<br />
Faculty Sponsor: Dr. Bradley Stith, DC - College <strong>of</strong><br />
Liberal Arts and Sciences<br />
Activity Type: Graduate Research<br />
We studied the events <strong>of</strong> fertilization in Xenopus<br />
laevis, specifically, the activation <strong>of</strong> chloride<br />
channels that cause Xenopus oocytes to depolarize<br />
after sperm-egg fusion. Chloride ions are at<br />
relatively low concentrations inside the cell when<br />
compared to the extracellular space. This causes a<br />
steep inward concentration gradient <strong>of</strong> Cl- into the<br />
cell. However, at resting membrane potential, the<br />
sum <strong>of</strong> the concentration and electrical force results<br />
in an outward electrochemical gradient. During<br />
fertilization in Xenopus, a calcium release causes<br />
chloride channels open allowing chloride ions to<br />
move out <strong>of</strong> the cell, thus depolarizing the<br />
membrane resulting in the fast block to polyspermy.<br />
Our method involves insertion <strong>of</strong> intracellular<br />
microelectrode into an oocyte to detect changes in<br />
chloride channel activity. We have a two electrode<br />
voltage clamp to directly record the amount <strong>of</strong><br />
current flowing through channels while sustaining a<br />
constant membrane potential. Phosphatidic acid’s<br />
ability to increase calcium and open chloride<br />
channels is inhibited by different tyrosine kinase<br />
inhibitors, or IP3 receptor blockers. These results<br />
suggest that phosphatidic acid stimulates Src<br />
tyrosine kinases which activate phospholipase Cï§,<br />
which releases IP3 and calcium. Decreased function<br />
<strong>of</strong> chloride channels causes the disease Cystic<br />
Fibrosis, our research may shed light upon this<br />
disease.<br />
66<br />
<strong>2009</strong> Research and Creative Activities Symposium
Graduate Students<br />
Adaptive-Multilevel BDDC<br />
Bedrich Sousedik, Applied Mathematics, DC -<br />
College <strong>of</strong> Liberal Arts and Sciences<br />
Faculty Sponsor: Dr. Jan Mandel, DC - College <strong>of</strong><br />
Liberal Arts and Sciences<br />
Activity Type: Graduate Research<br />
The BDDC method proposed in 2003 by Clark R.<br />
Dohrmann is the most advanced method from the<br />
Balancing family <strong>of</strong> iterative substructuring methods<br />
for the solution <strong>of</strong> large systems <strong>of</strong> linear algebraic<br />
equations arising from discretization <strong>of</strong> elliptic<br />
boundary value problems. In the case <strong>of</strong> many<br />
substructures, solving the coarse problem exactly<br />
becomes a bottleneck. Since the coarse problem in<br />
BDDC has the same structure as the original<br />
problem, it is straightforward to apply the BDDC<br />
method recursively to solve the coarse problem only<br />
approximately. We have formulated a new family <strong>of</strong><br />
abstract Multispace BDDC methods and gave<br />
condition number bounds from the abstract additive<br />
Schwarz preconditioning theory. The Multilevel<br />
BDDC is then treated as a special case <strong>of</strong> the<br />
Multispace BDDC. However, the condition number<br />
bounds reveal deteriorating convergence <strong>of</strong> the<br />
method with increasing number <strong>of</strong> levels that cannot<br />
be improved. In another research direction we have<br />
developed a method for the adaptive selection <strong>of</strong> the<br />
coarse space for the original, two-level, BDDC<br />
method. The method work by adding coarse<br />
degrees <strong>of</strong> freedom constructed from eigenvectors<br />
associated with intersections <strong>of</strong> selected pairs <strong>of</strong><br />
adjacent substructures. In this contribution we<br />
combine the advantages <strong>of</strong> both approaches to<br />
propose a method that preserves both, parallel<br />
scalability with increasing number <strong>of</strong> unknowns and<br />
excellent convergence properties. The performance<br />
<strong>of</strong> the method is illustrated by several numerical<br />
examples.<br />
Hybridscape: A Proposal for<br />
Wynkoop Street & <strong>Denver</strong> Union<br />
Station<br />
David Sprunt, Landscape Arch & Urban Design<br />
(dual degree), DC - College <strong>of</strong> Architecture and<br />
Planning<br />
Christine Shine, Landscape Architecture & Urban<br />
Design, DC - College <strong>of</strong> Architecture and Planning<br />
Carrie Kronberg, Architecture & Urban Design, DC<br />
- College <strong>of</strong> Architecture and Planning<br />
Gary Taipalus, M-Arch/MUD 2008, College <strong>of</strong><br />
Architecture & Planning<br />
Faculty Sponsor: Mr. Fred Andreas, DC - College<br />
<strong>of</strong> Architecture and Planning<br />
Activity Type: Graduate Creative Activity<br />
<strong>2009</strong> Outstanding Research and Creative<br />
Activities Award Winner<br />
<strong>Denver</strong> Union Station was once the gateway to the<br />
city and remains one <strong>of</strong> the finest examples <strong>of</strong> a<br />
major 19th century transportation hub. Our objective<br />
in this studio project is to provide sustainable urban<br />
design guidance for the renaissance <strong>of</strong> Union<br />
Station and the Wynkoop Street corridor between<br />
Cherry Creek and Coors Field, creating a major<br />
public space in the heart <strong>of</strong> the city. HYBRIDscape<br />
is a vision that bridges the gap between the street’s<br />
historic past and a sustainable future. Our project<br />
envisions a sustainable, walkable, and transit-served<br />
urban neighborhood that serves as a gateway to<br />
Lower Downtown. As the station once again<br />
becomes the region’s major transportation hub, the<br />
project transforms parking lots and the historic street<br />
in front <strong>of</strong> the station into a pedestrian-friendly plaza.<br />
The design creates a flexible space that handles<br />
thousands <strong>of</strong> daily commuters, special events and<br />
sports crowds, and also provides more intimate<br />
spaces, manages storm water, generates power for<br />
the neighborhood, and highlights native plants,<br />
natural processes and local history. The project<br />
integrates urbanism with high-performance buildings<br />
and high-performance infrastructure as a means to<br />
create potential: for architecture, for humanity, and<br />
for a sustainable future.<br />
<strong>2009</strong> Research and Creative Activities Symposium 67
Graduate Students<br />
Development <strong>of</strong> Core Competency<br />
for Trauma Nurses in Thailand<br />
Krongdai Unhasuta, Nursing, AMC - College <strong>of</strong><br />
Nursing<br />
Faculty Sponsor: Dr. Marylou Robinson, AMC -<br />
College <strong>of</strong> Nursing<br />
Activity Type: Graduate Research<br />
There are no programs to prepare trauma nurses in<br />
Thailand. A research plan for identification and<br />
development <strong>of</strong> core competencies was undertaken<br />
in three phases. Phase I: A national survey <strong>of</strong> the<br />
critical dimensions <strong>of</strong> care; Phase II: Development <strong>of</strong><br />
a 64 item tool; and Phase III: A three year pilot study<br />
in hospitals representing Level I, Regional,<br />
Community and Rural facilities. Six dimensions <strong>of</strong><br />
competency include: cooperation, decision-making,<br />
leadership, problem-solving, teamwork, and<br />
technical knowledge with the content validity index<br />
(CVI) <strong>of</strong> 1.00 and Cronbach’s α <strong>of</strong> 0.98 ( N= 485 in<br />
29 hospitals). In the first year analysis <strong>of</strong> pilot study<br />
data using a 5 point likert scale ( N = 285 RNs in 16<br />
hospitals); nurses rated themselves as 4.18 (SD =<br />
0.69), their peers at 4.00 (SD = 0.68); while Head<br />
Nurse evaluations averaged 3.98 (SD = 0.55).<br />
ANOVA demonstrated no statistical significance (p =<br />
0.09) between groups. This demonstrates tool<br />
usefulness, but refinement is required prior to<br />
national distribution to include a factor analysis.<br />
Bioaccumulation <strong>of</strong> Heavy Metals<br />
by Mushrooms Growing Near<br />
Active and Abandoned Mines<br />
Christy Van Campen, Chemistry, DC - College <strong>of</strong><br />
Liberal Arts and Sciences<br />
Faculty Sponsor: Dr. Marc A. Donsky, DC -<br />
Chemistry<br />
Activity Type: Graduate Research<br />
Bioaccumulation <strong>of</strong> Heavy Metals by Mushrooms<br />
Growing Near Active and Abandoned Mines Dr.<br />
Marc A. Donsky and Ms. Christy Van Campen<br />
Department <strong>of</strong> Chemistry. <strong>University</strong> <strong>of</strong> <strong>Colorado</strong><br />
<strong>Denver</strong> History, Introduction and Abstract The ability<br />
<strong>of</strong> mushrooms to accumulate metals was brought to<br />
public attention by the Chernobyl disaster in April<br />
1986. Radioactive fallout contaminated miles <strong>of</strong><br />
forest around the plant. Testing <strong>of</strong> mushrooms<br />
growing in the area after the accident showed high<br />
levels <strong>of</strong> Cs 134 and 137 as well as other fallout<br />
metals. One mushroom, Gomphidius subroseus had<br />
accumulations <strong>of</strong> 10,000x the soil levels <strong>of</strong><br />
radioactive Cesium. The popular edible, Boletus<br />
edulis, had levels 10x the ambient <strong>of</strong> Cadmium. In<br />
<strong>Colorado</strong>, collecting wild mushrooms for the kitchen<br />
is becoming increasingly popular. Mushrooms are<br />
<strong>of</strong>ten found growing near mines and mine run<strong>of</strong>f.<br />
Our project involves collecting mushrooms from<br />
these sites and testing the soil and mushrooms for<br />
metal contamination using ICP-MS as our analytical<br />
tool. This project will tell us if it is safe or wise to eat<br />
mushrooms collected from these sites. Preliminary<br />
results indicate that the mushrooms growing near<br />
mines are heavily contaminated and are not safe to<br />
eat.<br />
68<br />
<strong>2009</strong> Research and Creative Activities Symposium
Graduate Students<br />
Pollination Biology <strong>of</strong> the Stream<br />
Orchid, Epipactis gigantea, (Dougl.<br />
Ex Hook) at Three <strong>Colorado</strong><br />
Elevations<br />
Denise C Wilson, DC - College <strong>of</strong> Liberal Arts and<br />
Sciences<br />
Faculty Sponsor: Dr. Leo P Bruederle, DC -<br />
College <strong>of</strong> Liberal Arts and Sciences<br />
Activity Type: Graduate Research<br />
An understanding <strong>of</strong> a species’ breeding system is<br />
essential to the conservation <strong>of</strong> rare plants. This<br />
research characterized the breeding system, visitor<br />
guild, and effective pollinators for Epipactis gigantea<br />
Dougl. ex Hook (Orchidaceae) at three <strong>Colorado</strong><br />
sites differing in elevation. Results from a breeding<br />
system experiment revealed statistically significant<br />
differences in success as measured by fruit set<br />
across treatment groups. Epipactis gigantea was<br />
observed to be protandrous and self-compatible,<br />
with 59% <strong>of</strong> all self-pollinations setting fruit. Outcrossing<br />
was most successful (72%) and differed<br />
from hand-pollinations involving donor pollen from<br />
another flower on the same plant or geitonogamy<br />
(63%) and the control (62%). The visitor guild<br />
comprised a variety <strong>of</strong> ants, flies, beetles, bees, and<br />
spiders. Although E. gigantea was visited most <strong>of</strong>ten<br />
by ants, specifically, Formica neogagates, six<br />
species <strong>of</strong> syrphid flies were found to be effective<br />
pollinators, the most frequent being Sphaerophoria<br />
philanthus. Time lapse photography further<br />
documented pollination by syrphid flies, which<br />
deposit pollen (not entire pollinium) on the stigmas<br />
<strong>of</strong> several flowers along the same raceme.<br />
<strong>2009</strong> Research and Creative Activities Symposium 69
Graduate Students<br />
Nanogel-Modified Dental<br />
Adhesives<br />
Nicholas Wilson, Doctor <strong>of</strong> Dental Surgery, AMC -<br />
School <strong>of</strong> Dental Medicine<br />
Faculty Sponsor: Dr. Jeffrey Stansbury, AMC -<br />
School <strong>of</strong> Dental Medicine<br />
prospect <strong>of</strong> a stronger, more reliable dentinrestorative<br />
interface has important clinical<br />
implications, especially considering the nanogel<br />
technology can be incorporated into existing<br />
adhesive materials in a relatively generic manner.<br />
Supported by: NIH/NIDCR DE5R21DE018354 and<br />
Septodont/Confi-Dental<br />
Activity Type: Graduate Research<br />
Reactive nano-scale polymeric particles (nanogels)<br />
have been demonstrated to reduce polymerization<br />
shrinkage and stress in dental resins. Objective:<br />
Determine potential benefits associated with the use<br />
<strong>of</strong> relatively hydrophobic nanogels as additives in a<br />
model dental adhesive material. Methods: Nanogels<br />
were prepared by solution photopolymerization <strong>of</strong><br />
isobornyl methacrylate (IBMA)/urethane<br />
dimethacrylate (UDMA) or IBMA/ethoxylated<br />
bisphenol A dimethacrylate (EBDMA) (70:30 mole<br />
ratio) with mercaptoethanol (15mol%). The inert<br />
nanogels were converted to reactive macromers by<br />
a subsequent reaction with isocyanatoethyl<br />
methacrylate. The model bonding agent was<br />
composed <strong>of</strong> BisGMA/HEMA (60:40 mass ratio) and<br />
included 12 wt% <strong>of</strong> ethanol to mimic the residual<br />
solvent content <strong>of</strong> an air-thinned solvated adhesive.<br />
A bisacylphosphine oxide initiator (Irgacure 819; 0.2<br />
wt%) was introduced to promote visible light<br />
photopolymerization. The reactive nanogels were<br />
incorporated in the adhesive formulation at 25 wt%<br />
and degree <strong>of</strong> conversion, water sorption/solubility<br />
as well as wet/dry mechanical properties <strong>of</strong> the<br />
photopolymers were determined. Results: Addition<br />
<strong>of</strong> the either <strong>of</strong> the reactive nanogels significantly<br />
reduced the solubility <strong>of</strong> the adhesive polymer. For<br />
the more hydrophobic IBMA/EBDMA-based nanogel<br />
additive, the equilibrium water sorption was 18 %<br />
lower than the unmodified control. Both the initial<br />
flexural modulus and ultimate strength <strong>of</strong> the dry<br />
polymers were improved significantly with the<br />
nanogel additives. Most notably, the wet mechanical<br />
properties <strong>of</strong> the nanogel-containing polymers<br />
remained equivalent to their dry strength values<br />
whereas the control polymer suffered a dramatic<br />
reduction <strong>of</strong> approximately 50 % in wet strength<br />
compared with the dry control. Conclusions: The<br />
introduction <strong>of</strong> reactive, hydrophobic nano-scale<br />
polymeric particles in dental does not affect the<br />
degree <strong>of</strong> conversion achieved during<br />
polymerization but it does favorably reduce solubility<br />
and potential water uptake. While the nanogel<br />
additives raise the mechanical strength <strong>of</strong> the<br />
polymeric adhesive, the critical advantage is the lack<br />
<strong>of</strong> any deterioration in these excellent strength<br />
values under aqueous storage conditions. The<br />
70<br />
<strong>2009</strong> Research and Creative Activities Symposium
MIDDLE SCHOOL AWARD WINNERS<br />
HOSTED BY THE COLLEGE OF LIBERAL ARTS AND SCIENCES<br />
Seven <strong>of</strong> the best and brightest local high school students who placed in the top tier <strong>of</strong> the junior<br />
division categories at the <strong>Denver</strong> Metropolitan Science and Engineering Fair are showcasing<br />
their posters at the Symposium today. More than 270 middle and high school students from the<br />
<strong>Denver</strong> area competed at the fair in February. The College <strong>of</strong> Liberal Arts and Sciences (CLAS)<br />
sponsored the first, second, and third place junior division category awards. The student<br />
winners were invited by Dean Daniel J. Howard to have lunch with a few CLAS pr<strong>of</strong>essors prior<br />
to today's proceedings for the opportunity to learn more about what they hope to study in<br />
college, as well as discover more about the <strong>University</strong> <strong>of</strong> <strong>Colorado</strong> <strong>Denver</strong>.<br />
Keely Bachrodt BOOTH # 29<br />
7 th Grade, West Jefferson Middle School<br />
Project: (Microbiology) “Are You Sure You Want to Use that Sponge?”<br />
Hailey Davis BOOTH # 34<br />
6 th Grade, Stanley British Primary School<br />
Project: (Microbiology) “What is Left in Your Mouth After Swishing?”<br />
Mali Garrett-Mills BOOTH # 6<br />
7 th Grade, Smiley Middle School<br />
Project (Medicine and Health Sciences) “The Effects <strong>of</strong> Various Liquids on Hydroxyapatite<br />
Calcium Tablets: An Inadequate Model <strong>of</strong> Human Tooth Enamel”<br />
Henry Camp BOOTH # 21<br />
7 th Grade, <strong>Denver</strong> School <strong>of</strong> the Arts<br />
Project: (Engineering) “How a Checkered Chroma Key Background Makes Light Distortion<br />
Visible and Measurable”<br />
Luke Summar BOOTH # 13<br />
7 th Grade, West Jefferson Middle School<br />
Project: (Plant Sciences) “Let-Us Farm”<br />
Diego Ulibarri BOOTH # 40<br />
8 th Grade, Holy Trinity Catholic School<br />
Project: (Biochemistry) “Scrap to Fuel”<br />
Sophie Wright BOOTH # 55<br />
8 th Grade, Stanley British Primary School<br />
Project: (Chemistry) “C What Happens to Your Vitamin C?”<br />
<strong>2009</strong> Research and Creative Activities Symposium 71
Undergraduate<br />
Research<br />
Opportunities<br />
Program<br />
www.cudenver.edu/UROP<br />
UROP<br />
WHAT IS UROP?<br />
The Undergraduate Research Opportunities Program (UROP)<br />
enhances undergraduate education by funding students<br />
engaged in research, creative, and entrepreneurial activities<br />
in collaboration with faculty at UCDHSC, downtown <strong>Denver</strong><br />
campus.<br />
WHY PARTICIPATE?<br />
Students engaged in undergraduate research:<br />
• Integrate academic knowledge with<br />
hands-on experience<br />
• Enhance their creativity, confidence, and<br />
communication<br />
• Develop pr<strong>of</strong>essional skills sought by<br />
graduates schools and employers<br />
• Sharpen analytical and critical skills<br />
Undergraduate Research<br />
Increases Confidence<br />
Conducting research through UROP can be a great way to get to know<br />
faculty, researchers, graduate students, and other undergraduates who<br />
share similar academic and career interests.