Lecture 12 10/13/10 pdf - Department of Computer Science

cs.albany.edu

Lecture 12 10/13/10 pdf - Department of Computer Science

MSA with ClustalW

• Some things to keep in mind when aligning

with ClustalW.

– If ClustalW is not giving you the exact

alignment you want, do not tweak parameters

to change the alignment.

– Instead, use a manual alignment editor to

change the alignment.

Fall 2010 BIO540/STA569/CSI660 10

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