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Mitochondrial DNA variation and GIS analysis confirm a secondary ...
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Molecular Ecology (2001) 10, 603–611<br />
<strong>Mitochondrial</strong> <strong>DNA</strong> <strong>variation</strong> <strong>and</strong> <strong>GIS</strong> <strong>analysis</strong><br />
Blackwell Science, Ltd<br />
<strong>confirm</strong> a <strong>secondary</strong> origin of geographical <strong>variation</strong><br />
in the bushcricket Ephippiger ephippiger (Orthoptera:<br />
Tettigonioidea), <strong>and</strong> resurrect two subspecies<br />
MICHAEL G. RITCHIE,* DAVID M. KIDD† <strong>and</strong> JENNIFER M. GLEASON*<br />
*Environmental & Evolutionary Biology, Bute Medical Building, University of St Andrews, St Andrews, Fife KY16 9TS, UK,<br />
†Department of Geography, University of Portsmouth, Buckingham Building, Lion Terrace, Portsmouth PO1 3HE, UK<br />
Abstract<br />
Geographic <strong>variation</strong> within species can originate through selection <strong>and</strong> drift in situ (primary<br />
<strong>variation</strong>) or from vicariant episodes (<strong>secondary</strong> <strong>variation</strong>). Most patterns of subspecific<br />
<strong>variation</strong> within European flora <strong>and</strong> fauna are thought to have <strong>secondary</strong> origins, reflecting<br />
isolation in refugia during Quaternary ice ages. The bushcricket Ephippiger ephippiger has<br />
an unusual pattern of geographical variability in morphology, behaviour <strong>and</strong> allozymes in<br />
southern France, which has been interpreted as reflecting recent primary origins rather than<br />
historical isolation. Re-<strong>analysis</strong> of this <strong>variation</strong> using Geographical Information Systems<br />
(<strong>GIS</strong>) suggests a possible zone of hybridization within a complex pattern of geographical<br />
<strong>variation</strong>. Here we produce a genetic distance matrix from restriction fragment length polymorphism<br />
(RFLP) b<strong>and</strong>sharing of an approximately 4.5 kb fragment of mitochondrial <strong>DNA</strong><br />
(mt<strong>DNA</strong>), <strong>and</strong> compare this with predictions resulting from the <strong>GIS</strong> <strong>analysis</strong>. The mt<strong>DNA</strong><br />
<strong>variation</strong> supports a postglacial origin of geographical <strong>variation</strong>. Partial Mantel test comparisons<br />
of genetic distances with matrices of geographical distance, relevant environmental characteristics<br />
<strong>and</strong> possible refugia show refugia to be the best predictors of genetic distance.<br />
There is no evidence to support isolation by distance. However, environmental contrasts do<br />
explain significant <strong>variation</strong> in genetic distance after allowing for the effect of refugial origin.<br />
Also, a neighbour-joining tree has a major division separating eastern <strong>and</strong> western forms. We<br />
conclude that the major source of <strong>variation</strong> within the species is historical isolation in glacial<br />
refugia, but that dispersal, hybridization <strong>and</strong> selection associated with environmental features<br />
has influenced patterns of mt<strong>DNA</strong> introgression. At least two valid subspecies can be defined.<br />
Keywords: genetic distance, <strong>GIS</strong>, geographical <strong>variation</strong>, hybrid zone, Mantel <strong>analysis</strong>, mt<strong>DNA</strong><br />
Received 4 June 2000; revision received 23 August 2000; accepted 23 August 2000<br />
Introduction<br />
The study of geographical <strong>variation</strong> <strong>and</strong> systematics has<br />
played a major role in the development of theories of<br />
speciation. Geographic <strong>variation</strong> can arise in a number of<br />
ways but, following from Mayr (1942), two major causes<br />
have been distinguished. Primary <strong>variation</strong> arises in situ<br />
because of contemporary or recent selection <strong>and</strong> drift. In<br />
contrast, <strong>secondary</strong> <strong>variation</strong> arises from historical vicariant<br />
events. Hewitt <strong>and</strong> colleagues have argued that most major<br />
Correspondence: Michael G. Ritchie. Fax: 01334 463 6000; E-mail:<br />
mgr@st-<strong>and</strong>.ac.uk<br />
hybrid zones in Europe reflect divergence during Quaternary<br />
ice ages (e.g. Barton & Hewitt 1985), with periodic expansion<br />
<strong>and</strong> contraction cycles accentuating <strong>and</strong> accumulating<br />
genetic differences (Hewitt 1988, 1989, 1996, 1999; see also<br />
Remington 1968; Taberlet et al. 1998).<br />
Despite the common assumption that most hybrid zones<br />
result from <strong>secondary</strong> contact, steep coincident clines in<br />
organisms can have a primary origin, having arisen in<br />
response to exogenous selection across ecotones (Endler<br />
1977; Harrison 1990). It is not possible to clearly distinguish<br />
primary or <strong>secondary</strong> origins of hybrid zones from an<br />
examination of their geographical context, because many<br />
areas of <strong>secondary</strong> contact are likely to occur across ecotones<br />
© 2001 Blackwell Science Ltd
604 M. G. RITCHIE, D. M. KIDD <strong>and</strong> J . M . GLEASON<br />
(Hewitt 1989). Also, theory suggests that the characteristics<br />
of primary <strong>and</strong> <strong>secondary</strong> clines will be identical (Endler<br />
1977; Barton & Hewitt 1985; but see Durrett et al. 2000). Distinguishing<br />
primary <strong>and</strong> <strong>secondary</strong> origins of clines <strong>and</strong><br />
hybrid zones remains a major, <strong>and</strong> relatively poorly met, aim<br />
of studies of geographical <strong>variation</strong> (Thorpe 1984; Harrison<br />
1990, 1993; Willett et al. 1997; Schilthuizen 2000).<br />
The bushcricket (katydid) Ephippiger ephippiger (Feibig<br />
1784) is a flightless tettigoniid with unusual patterns of<br />
geographical <strong>variation</strong> <strong>and</strong>, as a result, has been subject to<br />
a number of taxonomic surveys <strong>and</strong> revisions. The species<br />
is patchily distributed <strong>and</strong> highly variable in morphology<br />
<strong>and</strong> behaviour. This is most pronounced in southern<br />
France, from the Pyrenees to the Alps, where a number of<br />
species <strong>and</strong> subspecies have been described. Harz (1969), a<br />
st<strong>and</strong>ard taxonomic reference for European tettigoniids,<br />
recognized three species within the group under consideration<br />
here. E. ephippiger is a medium sized, predominantly<br />
green bushcricket with a monosyllabic calling song found<br />
in central Europe, with the subspecies E. e. vitium (Serville<br />
1831) in western Europe <strong>and</strong> E. e. ephippiger (Fiebig 1784) in<br />
the east (an additional five subspecies have been described,<br />
Hartley & Warne 1984). E. cunii (Bolivar 1877) is small, almost<br />
black, with a polysyllabic calling song, found in Catalonia.<br />
E. cruciger (Fieber 1853, syn. E. bitterensis) is large, grey or<br />
green, usually with a melanized sulcus on the pronotum<br />
<strong>and</strong> a mono- or polysyllabic calling song, found around<br />
the Languedoc (see Duijm & Oudman 1983; Kidd &<br />
Ritichie 2000, for distribution maps). Recently, studies have<br />
reduced these forms in taxonomic status. Duijm & Oudman<br />
(1983), Duijm et al. (1983) <strong>and</strong> Hartley & Warne (1984), after<br />
analyses of morphology <strong>and</strong> copulation compatabilities,<br />
concluded that only the cunii form was valid (as a subspecies),<br />
<strong>and</strong> combined E. e. cruciger, E. e. vitium <strong>and</strong> E. e. ephippiger<br />
into a single highly variable ‘superspecies’ which they<br />
termed E. ephippiger diurnus Kruseman (referred to here as<br />
E. ephippiger for simplicity). Duijm <strong>and</strong> colleagues (Oudman<br />
et al. 1989, 1990; Duijm 1990) further questioned whether<br />
cunii was valid even as a subspecies. They found low genetic<br />
divergence between forms (Nei’s D, from four allozyme<br />
loci, was around 0.03 between forms). They also examined<br />
the geographical pattern of clines for the morphological<br />
traits used to define the various forms. Visual inspection<br />
implied the clines were usually noncoincident geographically<br />
<strong>and</strong> extremely wide. Some were 50–100 km wide, which<br />
compares with an average cline width for similar traits of<br />
5–10 km in the Pyrenean hybrid zone of Chorthippus parallelus<br />
(Hewitt 1989; Butlin 1998), an organism which probably<br />
has a higher dispersal than E. ephippiger. Oudman et al.<br />
(1990) concluded that the geographical <strong>variation</strong> within<br />
E. ephippiger was unlikely to reflect <strong>secondary</strong> contact: ‘We<br />
see the E. ephippiger complex as a subspecies … with sufficient<br />
gene flow to restrict differentiation. In the south of<br />
France the species has met conditions that have led to<br />
greater differentiation. This has on the one h<strong>and</strong> the character<br />
of shallow clines, perhaps along environmental gradients<br />
<strong>and</strong> probably adaptive, <strong>and</strong> on the other h<strong>and</strong> a chance<br />
character as the result of genetic drift <strong>and</strong> r<strong>and</strong>om dispersal<br />
effects.’ Oudman et al. (1990) also concluded that no valid<br />
subspecies could be distinguished, the local forms being<br />
‘without taxonomic status’. This interpretation has been<br />
adopted by other authorities (Ragge & Reynolds 1998; p. 71).<br />
We have re-examined E. ephippiger from southern France<br />
from two perspectives. Geographical Information Systems<br />
(<strong>GIS</strong>) facilitate the detailed examination of spatially patterned<br />
data. We employed <strong>GIS</strong> to examine concordance between<br />
interpolated trait clines <strong>and</strong> ecotones, to ask if the broad,<br />
nonconcordant clines are coincident with ecotones, as<br />
would be expected if they result from primary selection.<br />
Additionally, <strong>GIS</strong> has been used to try to identify clusters in<br />
the geographical variability, which might reflect <strong>secondary</strong><br />
origins, separate from or additional to the primary <strong>variation</strong>.<br />
If geographical clusters truly reflect <strong>secondary</strong> subdivisions<br />
within the species, we would expect these to be supported<br />
by similar patterns in genetic differentiation. A study of<br />
r<strong>and</strong>om amplified polymorphic <strong>DNA</strong> (RAPD) markers<br />
broadly separated the cunii form from cruciger <strong>and</strong> vitium<br />
(Ritchie et al. 1997), but this survey was geographically<br />
limited. Here we report restriction fragment length polymorphism<br />
(RFLP) <strong>analysis</strong> of mitochondrial <strong>DNA</strong> (mt<strong>DNA</strong>)<br />
using more extensive samples. Partial Mantel test analyses<br />
(Thorpe 1996) of matrices of genetic distance compared<br />
with geographical distance, ‘environmental distance’ <strong>and</strong><br />
potential ice age refugial origins imply that most genetic<br />
<strong>variation</strong> reflects refugia, though significant partitioning is<br />
also associated with environmental <strong>variation</strong>.<br />
Background: Geographical Information Systems <strong>analysis</strong><br />
of geographical <strong>variation</strong> in E. ephippiger<br />
Full details of our <strong>GIS</strong> <strong>analysis</strong> of geographical <strong>variation</strong> in<br />
E. ephippiger are available elsewhere (Kidd & Ritchie 2000,<br />
2001). Briefly, data was compiled on geographical <strong>variation</strong><br />
in morphological, allozyme <strong>and</strong> behavioural traits,<br />
as well as abiotic environmental parameters. Individual<br />
<strong>and</strong> multivariate trait surfaces were interpolated, compared<br />
with environmental data, <strong>and</strong> examined for co<strong>variation</strong><br />
<strong>and</strong> concordance. Environmental features explained little<br />
other than body size of the organism. In contrast to the<br />
interpretation of these data by Oudman et al. (1990), some<br />
concordance between patches was observed in the interpolated<br />
surfaces, <strong>and</strong> fairly sharp, coincident transitions in<br />
some traits were detected. Figure 1 indicates the centre of a<br />
relatively steep multivariate cline, which broadly follows<br />
the path of the Aude river. Multivariate discriminant analyses<br />
(with resampled null models) <strong>confirm</strong>ed that the regions<br />
either side of the cline represent significant clusters within<br />
a complex pattern of geographical variability. Kidd &<br />
© 2001 Blackwell Science Ltd, Molecular Ecology, 10, 603–611
GEOGRAPHIC VARIATION IN A BUSHCRICKET 605<br />
Fig. 1 Location of collecting sites for the mt<strong>DNA</strong> <strong>analysis</strong> in southern France. Also indicated is the position of the cryptic hybrid zone<br />
inferred in Kidd & Ritchie (2000) from more extensive samples, plus geographical features referred to in the text. Assignment of specimens<br />
to the forms is indicated (V = vitium, Cu = cunii, Cr = cruciger). Inset shows details of the eastern Pyrenees, <strong>and</strong> the locations of the<br />
Cerdagne, Capcir <strong>and</strong> Conflent regions.<br />
Ritchie (2000) concluded that the cline represented a<br />
‘cryptic hybrid zone’ where some traits, notably genitalia,<br />
probably reflected <strong>secondary</strong> contact between forms originating<br />
from western (Iberian) <strong>and</strong> an unidentified eastern refugia.<br />
This was broadly but imperfectly coincident with the vitium<br />
<strong>and</strong> cunii forms. The cruciger form was more difficult to fit<br />
into this reconstruction. Some traits, notably the frequency of<br />
some allozymes <strong>and</strong> the third principal component, broadly<br />
matched the distribution of crickets identified as cruciger,<br />
but this was around both sides of the eastern end of the<br />
potential hybrid zone, near Narbonne (around the mouth<br />
of the Aude). Kidd & Ritchie (2000) suggested three possibilities;<br />
cruciger was not valid, cruciger was a hybrid form,<br />
or cruciger was from a distinct western refugium.<br />
Materials <strong>and</strong> methods<br />
mt<strong>DNA</strong> <strong>analysis</strong><br />
Samples were collected throughout southern France over<br />
several years by M.G. Ritchie (Fig. 1). During collection,<br />
crickets were provisionally assigned to the forms cunii,<br />
cruciger or vitium according to morphology <strong>and</strong> behaviour<br />
(a single assignment per locale). Fifty-three individuals<br />
were analysed, including individuals of Ephippiger perforatus,<br />
E. terrestris <strong>and</strong> Uromenus rugosicollis as outgroup specimens.<br />
<strong>DNA</strong> was extracted from frozen or ethanol preserved<br />
hind femora using the Puregene <strong>DNA</strong> Isolation Kit (Gentra<br />
Systems). Based on the Locusta migratoria mt<strong>DNA</strong> sequence,<br />
we designed primers to amplify the region including cytochrome<br />
oxidase (CO) subunits II <strong>and</strong> III, ATPase6, NADH<br />
subunits 3 <strong>and</strong> 5, as well as nine tRNAs, for a total length of<br />
approximately 4.5 kb. Polymerase chain reaction (PCR) conditions<br />
were denaturing 92 °C for 2 min followed by 10 cycles<br />
of 92 °C for 10 s, 55 °C for 15 s, 69 °C for 2 min; <strong>and</strong> then 30<br />
cycles of 92 °C for 10 s, 60 °C for 15 s; 68 °C for 2 min extended<br />
by 20 s per cycle. Reactions were done in 100 µL volumes<br />
with 3.5 mm MgCl 2<br />
, 0.1 mm dNTP, 1× Optibuffer (Bioline)<br />
<strong>and</strong> 2 units Bio-X-Act <strong>DNA</strong> polymerase (Bioline). The forward<br />
primer was located within cytochrome oxidase I (COI) <strong>and</strong><br />
the reverse primer within ND5. Their sequences for the<br />
first, C2-J-3120: was GGCAACYTGATCYAMTTTRAATTT-<br />
ACAAAAATAGTGC <strong>and</strong> for the second, N5-N-7700, was<br />
ACAGCTTTGTCAAATCGYRTTGGGGATGT.<br />
© 2001 Blackwell Science Ltd, Molecular Ecology, 10, 603–611
606 M. G. RITCHIE, D. M. KIDD <strong>and</strong> J . M . GLEASON<br />
Following PCR, the products were digested singly by eight<br />
different restriction enzymes: DraI, EcoRI, HaeIII, HpaII,<br />
Hsp92II, RsaI, StyI <strong>and</strong> TaqI (Promega). This resulted in a total<br />
of 119 fragments that were scored for presence <strong>and</strong> absence.<br />
A similarity (b<strong>and</strong> sharing) index S (Nei & Li 1979) was<br />
calculated from the restriction profiles of each individual as<br />
S = 2Na,b/(Na + Nb), where Na, Nb = number of b<strong>and</strong>s in<br />
individual a, b <strong>and</strong> Na,b = number of shared b<strong>and</strong>s. A genetic<br />
distance matrix was constructed from 1-S. A phenogram<br />
was produced from this matrix using the neighbour-joining<br />
algorithm (default conditions, r<strong>and</strong>omised input order) in<br />
phylip 3.57c (Felsenstein 1995). Bootstrap values are derived<br />
from 100 resamples (with replacement) of the RFLP data.<br />
Matrix comparisons<br />
Matrix comparisons provide a powerful method of assessing<br />
the association between biological or environmental features<br />
<strong>and</strong> <strong>variation</strong> within a species (Douglas & Endler 1982;<br />
Smouse et al. 1986; Thorpe 1996). In order to assess the best<br />
predictors of genetic distance, a series of indicator matrices<br />
were constructed <strong>and</strong> compared with the genetic distance<br />
matrix. Outgroups <strong>and</strong> multiple samples from individual<br />
populations were removed, reducing the number of samples<br />
to 30. Within populations, individuals were first removed<br />
if they had missing data (across all samples, the average<br />
proportion of missing data was 1.4%), then r<strong>and</strong>omly if more<br />
than one individual remained. Because replicate individuals<br />
usually group together it was not thought necessary to<br />
bootstrap this process.<br />
Predictor matrices were constructed from geographical<br />
distance, environmental dissimilarity, <strong>and</strong> two different<br />
vicariant scenarios. Inter-site distances were calculated<br />
from a user-defined network by network tracing in ArcInfo<br />
(Environmental Systems Research Institute 1997). This<br />
method produces a distance matrix not ‘as the crow flies’<br />
but ‘as the cricket crawls’, taking into account the real barriers<br />
of the Pyrenees <strong>and</strong> Mediterranean (Kidd & Ritchie 2001).<br />
A measure of ‘environmental distance’ between sites was<br />
derived from Kidd & Ritchie’s (2000) multiple linear regression<br />
model of body size. This explained 80% of the <strong>variation</strong><br />
in body size using a combination of latitude, altitude,<br />
irradiation, precipitation <strong>and</strong> distance from the coast (no<br />
other traits were significantly correlated with environmental<br />
parameters). The fitted values of this model were used<br />
as a proxy measure of relevant environmental variance.<br />
Euclidean similarity measures for each population were<br />
calculated <strong>and</strong> (1-environmental similarity) used to produce<br />
an environmental dissimilarity matrix.<br />
The first matrix constructed to reflect potential refugial<br />
history, the ‘east vs. west refugia’ (E–WR) matrix, simply<br />
contrasted populations which probably originated in eastern<br />
vs. western refugia. Thus, all vitium populations were<br />
assumed to originate in an eastern refugium, <strong>and</strong> cunii <strong>and</strong><br />
cruciger from a western refugium (if pairs of populations<br />
arose from the same refugium they were ascribed a contrast<br />
of 0, 1 if from different refugia). The second matrix, the ‘three<br />
refugia’ (3-R) matrix, was constructed to include the possibility<br />
of a separate western refugium for the cruciger crickets.<br />
To reflect the fact that such a refugium was more proximal<br />
to the main western refugium, contrasts were 0 if populations<br />
probably arose from the same refugium (i.e. if the samples<br />
were considered of the same form), 1 if from the main Iberian<br />
refugium vs. the eastern refugium, 0.2 if from the two separate<br />
western refugia, <strong>and</strong> 0.8 if from the eastern vs. ‘cruciger’<br />
refugium. Note that in constructing these matrices, the<br />
original assignment of specimens to type during collection<br />
was used, not the position of the sample in the mt<strong>DNA</strong> tree.<br />
We, therefore, have five matrices: genetic distance is the<br />
response matrix <strong>and</strong> there are four predictor matrices. The<br />
magnitude of the partial regression coefficients indicates<br />
the relative importance of the different predictors. If differences<br />
in mt<strong>DNA</strong> reflects simple isolation by distance, geographical<br />
distance would be the best predictor. If primary<br />
selection is most important, then environmental distance<br />
would be the best predictor. If vicariance is the most important,<br />
one of the refugial contrasts would be the best predictor<br />
(<strong>and</strong> the 3-R matrix best if the cruciger form was from a<br />
distinct refugium). All matrices were transformed to a<br />
mean of zero <strong>and</strong> unit variance before completing partial<br />
Mantel analyses (Thorpe 1996; Smouse et al. 1986). Individual<br />
Mantel comparisons between genetic distance <strong>and</strong><br />
the predictor matrices were each strongly significant. Probability<br />
values are derived from 10 000 r<strong>and</strong>omizations of the<br />
response matrix. Matrix calculations were carried out using<br />
genstat (Genstat Committee 1993) <strong>and</strong> customised software.<br />
Results<br />
Matrix comparisons<br />
The regression coefficients <strong>and</strong> associated probability<br />
values for the predictor matrices are influenced by the<br />
number of matrices included in the <strong>analysis</strong>, <strong>and</strong> the two<br />
predictor matrices derived from refugial scenarios are<br />
themselves highly correlated. We, therefore, present three<br />
analyses, one with all four predictor matrices, <strong>and</strong> two<br />
with only one of the refugium contrasts (Table 1). As three<br />
tests were carried out, the critical value is 0.017 (2-tailed) or<br />
0.034 (1-tailed, perhaps justified for tests comparing such<br />
distances). There is no support for any contribution of<br />
isolation by distance. The environmental contrast approaches<br />
significance in each test, but the greatest matrix regression<br />
coefficients are always associated with the refugial contrasts.<br />
Both refugial models are similar, but that involving 3-R has<br />
a greater coefficient. When both are entered, E–WR is not<br />
significant. The value of the matrix coefficient is much<br />
greater for 3-R than the environmental contrast.<br />
© 2001 Blackwell Science Ltd, Molecular Ecology, 10, 603–611
GEOGRAPHIC VARIATION IN A BUSHCRICKET 607<br />
Table 1 Partial regression coefficients from three Mantel analyses (E–WR is the matrix constrasting eastern <strong>and</strong> western refugia, 3-R is that<br />
with an additional refugium for cruciger)<br />
Analysis Matrix Geographic Distance Environment E–WR 3-R<br />
Full model Partial regression coefficient 0.027 0.109 −0.155 0.588<br />
(probability) (ns) (0.032) (ns) (0.018)<br />
E–WR excluded Partial regression coefficient 0.030 0.107 — 0.434<br />
(probability) (ns) (0.027) (0.001)<br />
3-R excluded Partial regression coefficient 0.066 0.102 0.395 —<br />
(probability) (ns) (0.035) (0.001)<br />
(ns), nonsignificant.<br />
Fig. 2 Neighbour-Joining tree produced<br />
from mt<strong>DNA</strong> RFLP profiles of all individual<br />
bushcrickets used in the study. The assignment<br />
to form initially made in the field <strong>and</strong><br />
the population code number from Figs 1<br />
<strong>and</strong> 3 are indicated. The consensus tree<br />
from the bootstrapped data had a virtually<br />
identical topology. Values are shown for<br />
clades discussed in the text.<br />
mt<strong>DNA</strong> phylogeography<br />
A neighbour-joining tree based on the mt<strong>DNA</strong> RFLPs is<br />
not well resolved (Fig. 2). This is probably not surprising<br />
given the high number of samples from regions of<br />
hybridization. Despite this, some clades are well supported.<br />
The deepest division within Ephippiger ephippiger almost<br />
perfectly separates individuals identified as vitium from<br />
the remainder of the samples (Fig. 2). This division fairly<br />
closely corresponds with the location of the putative Kidd<br />
© 2001 Blackwell Science Ltd, Molecular Ecology, 10, 603–611
608 M. G. RITCHIE, D. M. KIDD <strong>and</strong> J . M . GLEASON<br />
Fig. 3 The branching pattern of a neighbourjoining<br />
tree superimposed on the geography<br />
of the region. This tree contained only one<br />
sample per collecting site. Branch lengths are<br />
determined by geography, but the branching<br />
pattern reflects the genetic distances.<br />
& Ritchie contact zone (compare Fig. 3). The only samples<br />
in the ‘incorrect’ clades are one from Lodeve, which is from<br />
the area of transition between the vitium <strong>and</strong> other forms,<br />
<strong>and</strong> one from the Col du Pourtalet. The ‘pure’ vitium clade<br />
is reasonably well supported.<br />
There are other striking features of this tree. The deepest<br />
node within the nonvitium samples separate off a branch<br />
containing cunii samples from the Segre river valley (the<br />
Cerdagne region of the Pyrenees) from the remainder of<br />
the cunii <strong>and</strong> cruciger samples. A second node separates<br />
off cunii samples from the Têt river valley (the Conflent<br />
region). The remainder of the tree includes samples from a<br />
third Pyrenean valley, that of the river Aude (the Capcir<br />
region) <strong>and</strong> samples from the Languedoc. This branch,<br />
therefore, contains samples identified as cunii <strong>and</strong> nearly<br />
all the cruciger samples. The Aude valley is the northernmost<br />
of the eastern Pyrenean valleys sampled here (north of the<br />
main watershed), <strong>and</strong> leads down into the Languedoc.<br />
Discussion<br />
The large morphological <strong>and</strong> behavioural variability<br />
within Ephippiger ephippiger has lead to a confusing series of<br />
taxonomic classifications <strong>and</strong> revisions (Harz 1969; Hartley<br />
& Warne 1984). Previous studies concluded that none of the<br />
described species or subspecies were taxonomically valid,<br />
<strong>and</strong> that the <strong>variation</strong> reflected primary differentiation<br />
(Oudman et al. 1989, 1990; Duijm 1990; but see Gr<strong>and</strong>colas<br />
1987). Our current analyses lead us to conclude that the<br />
major source of <strong>variation</strong> is historical isolation during<br />
recent glaciations, followed by <strong>secondary</strong> contact between<br />
eastern <strong>and</strong> western forms, as has commonly shaped<br />
subspecific <strong>variation</strong> in European flora <strong>and</strong> fauna (Taberlet<br />
et al. 1998; Hewitt 1999; Vogel et al. 1999). However, in partial<br />
Mantel analyses, genetic variability is correlated with environmental<br />
contrasts even after allowing for the influence of<br />
refugia, <strong>and</strong> significant environmental influences are also<br />
detectable on body size (Kidd & Ritchie 2000). Both<br />
<strong>secondary</strong> contact <strong>and</strong> environmental selection have therefore<br />
influenced the pattern of genetic variability, though<br />
<strong>secondary</strong> contact has had the greater effect.<br />
Evidence supporting a vicariant origin of the differentiation<br />
comes from the consistently high Mantel regression<br />
coefficients associated with the refugial contrast matrices<br />
(Table 1), which is also reflected in the deepest node within<br />
the mt<strong>DNA</strong> relationships separating the samples into eastern<br />
<strong>and</strong> western forms (Figs 2 <strong>and</strong> 3). The multivariate<br />
transition identified by Kidd & Ritchie (2000, 2001) lies<br />
within the same geographical region as the division in<br />
mt<strong>DNA</strong>, but the two are not exactly coincident (Figs 1 <strong>and</strong><br />
3). The division in mt<strong>DNA</strong> occurs to the north of the multivariate<br />
transition, somewhere south of Lodeve <strong>and</strong> west of<br />
Montpellier. This lack of coincidence could be due to primary<br />
selection patterning differential introgression of traits (see<br />
below), although cytoplasmic <strong>DNA</strong> introgression through<br />
hybrid zones is not uncommon (Shaw et al. 1990; Whittemore<br />
& Schaal 1991).<br />
Vitium, therefore, represents a form that probably originates<br />
from a refugium to the east of the study area. Many eastern<br />
European subspecies are thought to have originated in<br />
the Balkans or Caucasus (Hewitt 1996, 1999; Taberlet et al.<br />
1998), or perhaps in the Carpathians or Ural mountains<br />
(Lagercrantz & Ryman 1990). Vitium presumably occupies<br />
most of central Europe now, <strong>and</strong> extends as far west as the central<br />
Pyrenees. One sample from here (from site 2) falls within<br />
the western clade of the mt<strong>DNA</strong> tree (Fig. 3). E. ephippiger<br />
from this area has been claimed to represent yet another<br />
subspecies, E. moralesagacinoi (Harz 1969), but it seems<br />
more likely that there is another rapid transition between<br />
the eastern <strong>and</strong> western forms here (Oudman et al. 1990).<br />
The western form, comprising nearly all the samples<br />
identified as cunii or cruciger, has geographically structured<br />
mt<strong>DNA</strong> <strong>variation</strong>. Samples from around the Pyrenean<br />
watershed form distinct groups, with one from each of the<br />
© 2001 Blackwell Science Ltd, Molecular Ecology, 10, 603–611
GEOGRAPHIC VARIATION IN A BUSHCRICKET 609<br />
three main valleys (Cerdagne, Capcir <strong>and</strong> Conflent). This<br />
provides a striking contrast with previous conclusions of<br />
extensive gene flow based on allozyme, morphological <strong>and</strong><br />
RAPD markers (Oudman et al. 1990; Ritchie et al. 1997). The<br />
two deepest nodes within the western form separate off<br />
individuals from Cerdagne <strong>and</strong> Conflent. The remainder of<br />
the samples comprise a group including the northernmost<br />
cunii <strong>and</strong> almost all the cruciger samples, <strong>and</strong> geographically<br />
corresponds to Capcir <strong>and</strong> the Languedoc. Clearly, there is<br />
evidence of a shared mt<strong>DNA</strong> history to these samples,<br />
despite their extensive range (over 150 km). The distinctness<br />
of the cunii from different valleys, <strong>and</strong> the presence<br />
of cruciger within this clade, disrupts cunii as a<br />
genetic form. The 3-refugium matrix in the Mantel test was<br />
designed to test the distinctness of cruciger, <strong>and</strong> it always<br />
provided the greatest partial regression coefficient. So<br />
there is some evidence to support the existence of a distinct<br />
cruciger genotype, but the historical processes underlying<br />
the relationship between cunii <strong>and</strong> cruciger are obscure.<br />
We consider there to be two possible explanations whereby<br />
cruciger may represent a distinct form. The first is that<br />
cruciger was confined to a third refugium east of the Pyrenees,<br />
possibly around the Mediterranean coast. Cruciger would<br />
then have been subject to hybridization, first with the<br />
northernmost samples of cunii exp<strong>and</strong>ing from a Spanish<br />
refugium, then latterly with vitium exp<strong>and</strong>ing from an eastern<br />
refugium. Cruciger could be facing extinction via introgression<br />
due to this pincer movement. Most reconstructions of<br />
Quaternary glacial refugia in southern Europe only include<br />
major ones in southern Spain, Italy <strong>and</strong> the Balkans (Taberlet<br />
et al. 1998; Hewitt 1999). Huntley & Birks 1983 (see also Vogel<br />
et al. 1999) suggest that there was another refugium around<br />
the Alpes Maritimes, <strong>and</strong> there is a suggestion of Pleistocene<br />
coastal Mediterranean refugia including one around the<br />
mouth of the Rhône (Comes & Abbott 1998), but no other<br />
phylogenetic studies support the presence of distinct genotypes<br />
from around this area (Comes & Kadereit 1998).<br />
The second scenario is that cunii <strong>and</strong> cruciger are from<br />
partially distinct southern refugia, both in Iberia, but have<br />
a long history of hybridization <strong>and</strong> introgression during<br />
repeated expansion/contraction cycles, with the Languedoc<br />
being most recently invaded by a form already having<br />
undergone hybridization with northern cunii. Repeated<br />
hybridization could explain the imprecision of many of<br />
the taxonomic traits. This scenario is perhaps more likely<br />
given a very high level of Iberian endemism within the<br />
ephippigerinae in general (Harz 1969; Gangwere & Morales<br />
Agacino 1970). Also, several other studies have found<br />
evidence for multiple refugia or <strong>variation</strong> within Iberia<br />
(Cooper et al. 1995; Comes & Abbott 2000).<br />
Although the main genetic divisions reflect <strong>secondary</strong><br />
contact, we also detect evidence supporting primary selection<br />
influencing Ephippiger. This is most apparent in body size<br />
<strong>and</strong> body ratios (Kidd & Ritchie 2000). However, the<br />
partial Mantel tests show that, after allowing for refugia,<br />
environmental contrasts are still correlated with <strong>variation</strong><br />
in mt<strong>DNA</strong>. Environmental conditions are unlikely to select<br />
directly on mt<strong>DNA</strong>, it is more likely that indirect selection<br />
influences the introgression of genotypes including mt<strong>DNA</strong>.<br />
Cunii is probably more cold adapted or robust to inclement<br />
environmental conditions than vitium. Hybrid zones with<br />
a broad front are likely to act as semi-permeable barriers,<br />
with recombination separating out genotypes under direct<br />
selection from linked genetic <strong>variation</strong> (Barton & Gale 1993),<br />
but patchy, mosaic or intermittent episodes of hybridization<br />
may produce more opportunity for persistence of associations<br />
across different types of genetic markers (Harrison<br />
& R<strong>and</strong> 1989; Rieseberg & Wendel 1993; Arnold 1997).<br />
Our studies provide a good example of the value of an<br />
integrative approach, involving techniques from geographical<br />
<strong>analysis</strong> as well as spatial statistical <strong>analysis</strong> <strong>and</strong><br />
molecular phylogeography, in unravelling the pattern <strong>and</strong><br />
historical processes contributing to geographical <strong>variation</strong>.<br />
Conventional population genetic methods for estimating<br />
substructure within species allow little more than rejection<br />
of the hypotheses that populations are panmictic or show<br />
isolation by distance (Neigel 1997; Bossart & Prowell 1998;<br />
Whitlock & McCauley 1998). Techniques are required<br />
which allow detection of more realistic historical scenarios.<br />
<strong>GIS</strong> allows independent identification of clusters in population<br />
structure, <strong>and</strong> phylogeographic <strong>and</strong> Mantel tests, or<br />
hierarchical <strong>analysis</strong> of F ST<br />
or its derivatives can assess the<br />
validity of these externally derived predictors of clustering<br />
(Kidd & Ritchie 2001).<br />
These analyses have resurrected two forms of the<br />
bushcricket E. ephippiger from a taxonomic hinterl<strong>and</strong>, <strong>and</strong><br />
we conclude that vitium is a valid subspecies. Whether<br />
cruciger <strong>and</strong> cunii warrant separate subspecies status is<br />
more problematical <strong>and</strong> will rely on further analyses. The<br />
Mantel tests support their distinction, <strong>and</strong> several of the<br />
trait surfaces of Kidd & Ritchie (2000) show clusters around<br />
Narbonne. In contrast, the mt<strong>DNA</strong> relationships imply<br />
that cruciger mt<strong>DNA</strong> is a derived form of the cunii genotype,<br />
though this might be confused by hybridization<br />
between the northern cunii <strong>and</strong> cruciger forms. It is difficult<br />
to predict the effect of hybridization on phylogenetic trees<br />
(Arnold 1997).<br />
Finally, what lessons might E. ephippiger have for systematics?<br />
We think it appropriate to designate at least two<br />
forms of E. ephippiger as subspecies because they hybridize in<br />
nature, yet are distinguishable on multiple traits throughout<br />
the majority of their ranges. Some species definitions, particularly<br />
the Phylogenetic (Cracraft 1989) <strong>and</strong>, depending on<br />
details of hybrid populations, the Cluster species definitions<br />
(Mallet 1995) might justify the elevation of these forms<br />
to species status. We do not accept this due to the obvious<br />
hybridization <strong>and</strong> lack of obvious incompatibilities between<br />
the forms. However, does the systematic term ‘subspecies’<br />
© 2001 Blackwell Science Ltd, Molecular Ecology, 10, 603–611
610 M. G. RITCHIE, D. M. KIDD <strong>and</strong> J . M . GLEASON<br />
have genuine biological validity? Mayr (1942, p. 106) thought<br />
not: ‘The taxonomist is an orderly person whose task it is<br />
to assign every specimen to a definite category (or museum<br />
drawer!). This necessary process of pigeonholing has led to<br />
the erroneous belief … that subspecies are clear-cut units<br />
which can easily be separated from one another.… But subspecies<br />
intergrade almost unnoticeably in nearly all the<br />
cases in which there is distributional continuity’. This reflects<br />
Mayr’s (possibly essentialist, Mallet et al. 1998) view that<br />
species were the only ‘true’ biological categories within<br />
organisms. The increasing body of evidence that hybrid<br />
zones result from historical vicariance episodes between<br />
forms that have accumulated multiple concordant genetic<br />
differences over a time scale possibly stretching as far back<br />
as the Pliocene, must support a valid general concept of the<br />
subspecies (Avise & Ball 1990).<br />
Acknowledgements<br />
Matthijs Duijm <strong>and</strong> Leendert Oudman provided very generous<br />
help during the initial stages of this project. Bill Black, Hans Peter<br />
Comes, Colin Hartley, <strong>and</strong> Roger Thorpe provided advice, <strong>and</strong><br />
several people helped with fieldwork. Klaus-Gerhardt Heller<br />
kindly supplied the specimen of E. perforatus, <strong>and</strong> Roger Butlin<br />
<strong>and</strong> Jeff Graves gave advice on the manuscript. The work was<br />
funded by the NERC, UK, via a research fellowship <strong>and</strong> grant to<br />
MGR.<br />
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Mike Ritchie completed his PhD with Godfrey Hewitt, studying<br />
the Chorthippus parallelus hybrid zone in the Pyrenees. There he<br />
encountered Ephippiger ephippiger, <strong>and</strong> carried out a postdoctoral<br />
fellowship in Hewitt’s laboratory studying the behavioural <strong>variation</strong><br />
of this species. Dave Kidd has collaborated with MGR in applying<br />
<strong>GIS</strong> methods to the study of geographical <strong>variation</strong> in E. ephippiger.<br />
Jenny Gleason studies molecular evolution <strong>and</strong> quantitative genetics,<br />
<strong>and</strong> collaborated with MGR to develop the mt<strong>DNA</strong> RFLP <strong>analysis</strong><br />
of E. ephippiger.<br />
© 2001 Blackwell Science Ltd, Molecular Ecology, 10, 603–611