The Staphylococcus aureus secretome - TI Pharma

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Appendix III: Supplemental tables to Chapter 2 a. Identified proteins in extracellular proteomes of various S. aureus strains with a known signal peptide b. Identified proteins in the extracellular proteomes of various S. aureus strains without a known signal peptide c. The core exoproteome of S. aureus; proteins with predicted Sec type signal peptides present in all sequenced strains d. The variant exoproteome of S. aureus; proteins with predicted Sec type signal peptides present in at least one sequenced strain e. The core lipoproteome of S. aureus; proteins with predicted lipoprotein signal peptides present in all sequenced strains f. The variant lipoproteome of S. aureus; proteins with predicted lipoprotein signal peptides present in at least one sequenced strain g. Composition of the variant exoproteome of sequenced S. aureus strains h. Composition of the variant lipoproteome of sequenced S. aureus strains i. Specific S. epidermidis proteins with a predicted signal peptide j. Proteins with predicted Sec type signal peptides present in S. aureus RF122 Appendix IV: Supplemental tables to Chapter 3 a. Characteristics of the clinical S. aureus isolates used in this study b. Identified proteins on 2-D gels of the S. aureus isolates c. Extracellular proteins in different S. aureus isolates Appendix V: Supplemental tables to Chapter 9 a. Proteins of B. licheniformis DSM 13 with a predicted signal peptide b. Extracellular proteins of B. licheniformis which either contain an N-terminal signal peptide or which are known to be secreted by other pathways c. Proteins detected in the extracellular proteome lacking known export signals 206
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The Staphylococcus aureus secretome
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RIJKSUNIVERSITEIT GRONINGEN The Sta
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Paranimfen: Thijs R.H.M. Kouwen Mon
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Table of contents Chapter 1. Genera
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Chapter 1 Introduction and scope of
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Introduction and scope of this thes
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Introduction and scope of this thes
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Chapter 2 Mapping the pathways to s
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Mapping the pathways to staphylococ
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“Music is the medicine of the min
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Chapter 3 Summary Sequencing of at
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Chapter 3 transcription analyses, S
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Chapter 3 Lina et al., 2003). The a
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Chapter 3 (Supplemental tables IVb)
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Chapter 3 Figure 1. Characterizatio
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Chapter 3 Figure 3. Relative amount
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Chapter 3 strain of a patient who s
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“Music is my religion” -Johnny
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Chapter 4 Summary Staphylococcus au
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Chapter 4 secretion pathways have b
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Chapter 4 has been shown that S. au
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Chapter 4 Table 2 Plasmids and bact
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Chapter 4 Table 3 Primers used in t
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Chapter 4 containing X-gal and incu
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Chapter 4 assay, 25 L4-stage nemato
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Chapter 4 D O 540 18 16 14 12 10 8
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Chapter 4 These findings suggested
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Chapter 4 precursors by lgt mutant
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Chapter 4 aureus lgt mutants may be
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Chapter 5 Synthetic effects of secG
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Synthetic effects of secG and secY2
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Chapter 6 Partially overlapping sub
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Partially overlapping substrate spe
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Chapter 7 The large mechanosensitiv
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The large mechanosensitive channel
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Chapter 8 The extracellular proteom
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The extracellular proteome of Bacil
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Chapter 9 General summary and discu
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General summary and discussion Pred
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General summary and discussion sugg
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Chapter 10 Reference list 171
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Reference list Berks, B.C., Palmer,
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Reference list Cregg, K.M., Wilding
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Reference list Hartford, O., Franco
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Reference list Kouwen, T.R., Trip,
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Page 366: Reference list Robinson, C., and Bo
Page 370: Reference list Tjalsma, H., Zanen,
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Page 378: Chapter 11 Nederlandse samenvatting
Page 382: Nederlandse samenvatting Staphyloco
Page 386: Nederlandse samenvatting genomen di
Page 390: Nederlandse samenvatting als lichaa
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Page 398: Dankwoord onschatbare waarde (Montp
Page 402: Dankwoord And last but not least: E
Page 406: Appendix II Publication list 203
Page 410: Appendices III-V Supplemental table
Page 416: Appendix III Supplemental Table III
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Appendix III Supplemental Table III
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Appendix IV Supplemental Table IVa
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Appendix IV Supplemental Table IVb
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Appendix IV Supplemental Table IVc
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Appendix V Supplemental Table Va ID
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Appendix V Supplemental Table Vb Su
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Appendix V Supplemental Table Vb Pr
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Appendix V Supplemental Table Vb Pr
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Appendix V Supplemental Table Vc Pr
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