Text S1: Protein sequences and alignments of all proteins found in ...

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AT5G37590 MSLLRILSTLYYKGTHRTSRSFSSSRNNLICTTFANPLSGKPR RISYQNDYGGHRTNLH LHLLDSRLWIILSGQA AAILGFCGNTVLAEDESMKSKSGDNMDESGNN TGLEKIEDGSVVVSNIHTSKWRVFTDSSGRDYFFQGKLEPAER RLFGSAIQEAKEGFGE GEKDPHVASACNNLAE ELYRVKKEFDKAEPLY YLEAVSILEEFYGPDDD VRVGATLHNLGGQLYLVQRKLEEARACCYELKGRVLGYNHPDY YAETMYHLGTEKIQMR MRKLLFWILLKYLRHE EGGQGESMAYIRRLRY YLSQIYIRSNRLAEAEE KLQRKLLHMMEELSKGWNSMEAITAAEEALALTLRLSGKLGEA ALELFEKCLNARKKLL LLPEGHIQIGGNLLHIAKTFMLQASQMRRTDNSEALSKLEKAKNYLL ENSARIAKDVLLHKLKNQKSKAQKDEKKSSAALRNYEHAALVI ILLQSLESLAALEMSKKNEIHEPKEENLHAA AEDSLLQCVTAYKEFG GYGTQLQDSSEVKSEYY LSCLKHLSALLLAKKETTLNSKASPISSLPELKEEIKRIDIDL LRSQKTG GENE ID: 899953 KLC4 | kineesin light chain n 4 [Homo sapienns] (Over 10 PuubMed links) Score = 76. .3 bits (186), Expect = 1e-13, , Method: Compossitional matrix x adjust. Identitiess = 63/202 (31%) ), Positives = 97/202 9 (48%), Ga Gaps = 27/202 (13%) Query 130 Sbjct 144 Query 190 Sbjct 204 Query 246 Sbjct 264 Query 294 Sbjct 316 Score = 399.3 bits (90), Expect = 0.014, , Method: Compossitional matrix x adjust. Identitiess = 25/70 (35%), , Positives = 38 8/70 (54%), Gapss = 2/70 (2%) Query 133 Sbjct 273 Query 192 Sbjct 333 >AT5G37600 MSLVSDLINLNNLSDSTDKIIAEYIWVVGGSGMDMRSKARTLP PGPVTDPSQLPKWNYD YDGSSTGQAPGEDSEV VILYPQAIFKDPFRRG GNNILVMCDAYTPAGEE PIPTNKRHAAAAKVFSNPDVAAEVPWYYGIEQEYTLLQKDVKW WPVGWPIGGYPGPQGP GPYYCGIGADKSFGRD DVVDSHYKACLYAGIN NISGINGEVMPGQWEFF QVGPAVGISAAADEIWVARYILERITEEIAGVVVSFDPKPIPG GDWNGAGAHCNYSTKS KSMREEGGYEIIKKAIDKLGLRHKEHIAAYG GEGNERRLTGHHETADD INTFLWGVANRRGASIRVGRDTEKEGKKGYFEDRRPASNMDPY YIVTSMIAETTILWNP NP > gb|EEAW91118.1| [Homo sapieens] Length=384 GENE ID: 22752 GLUL | gluttamate-ammonia ligase l [Homo sappiens] (Over 10 PuubMed links) Score = 3397 bits (1020), , Expect = 2e-1 110, Method: Commpositional matrix adjust. Identitiess = 184/341 (53% %), Positives = 243/341 (71%), Gaps = 7/341 ( 2%) Query 17 Sbjct 24 Query 77 Sbjct 84 Query 137 Sbjct 142 Query 197 Sbjct 201 Query 257 Sbjct 261 Query 313 Sbjct 321 YFFQGKLEPAERLFFGSAIQEAKEGFGEKD DPHVASACNNLAELYR YRVKKEFDKAEPLYLEAV 189 Y QG+ E A L A+++ + G P VA+ N LA +YR YR + ++ +A L + A+ YAAQGRYEVAVPLCCKQALEDLERTSGRGH HPDVATMLNILALVYR YRDQNKYKEAAHLLND DAL 203 SILEEFYGPDDVRVVGATLHNLGQLYLVQR RKLEEARA----CYELLKGRVLGYNHPDYAETM 245 SI E GPD V ATL+NL LY + K +EA E+ ++ +VLG NHPD A+ + SIRESTLGPDHPAVVAATLNNLAVLYGKRG GKYKEAEPLCQRALEIIREKVLGTNHPDVAK KQL 263 YHL------------GTEKIQMRKLLFWIL LLKYLRHEGGQGESMA MAYIRRLR-YLSQIYIRS 293 +L E+ R L + EG G + R + L+ Y+ + NNLALLCQNQGKYEEAVERYYQRALAIY-- -------EGQLGPDNP NPNVARTKNNLASCYL LKQ 315 NRLAEAEKLQRKLLL---HMMEL 312 + AEAE L +++LL H+ E GKYAEAETLYKEILLTRAHVQEF 337 QGKLEPAERLFGSAAIQEAKEGFGEKDPHV VASACNNLAELYRVKK KKEFDKAEPLYLEAVSI- 191 QGK E ER + AA+ + G +P+V VA NNLA Y + ++ +AE LY E ++ QGKYEAVERYYQRAALAIYEGQLGPDNPNV VARTKNNLASCYLKQG QGKYAEAETLYKEILTRA 332 -LEEFYGPDD 2000 ++EF DD HVQEFGSVDD 3442 glutamate-ammon nia ligase (gluttamine synthetase), isoform CR RA_b DKIIAEYIWVGGSGGMDMRSKARTLPGPVT TDPSQLPKWNYDGSSTTGQAPGEDSEVILYP PQA 76 +K+ A YIW+ G+GG +R K RTL +LP+WN+DGSSTT Q+ G +S++ L P A EKVQAMYIWIDGTGGEGLRCKTRTLDSEPK KCVEELPEWNFDGSSTTLQSEGSNSDMYLVP PAA 83 IFKDPFRRGNNILVVMCDAYTPAGEPIPTN NKRHAAAKVFSNPDVA VAAEVPWYGIEQEYTL LLQ 136 +F+DPFR+ N LVV+C+ + P TN N RH ++ V+ + PW+G+EQEYTL L+ MFRDPFRKDPNKLVVLCEVFKYNRRPAETN NLRHTCKRIMDM--VS VSNQHPWFGMEQEYTL LMG 141 KDVKWPVGWPIGGYYPGPQGPYYCGIGADK KSFGRDVVDSHYKACLLYAGINISGINGEVM MPG 196 D P GWP G+ +PGPQGPYYCG+GAD+ +++GRD+V++HY+ACLLYAG+ I+G N EVM MP TDGH-PFGWPSNGFFPGPQGPYYCGVGADR RAYGRDIVEAHYRACLLYAGVKIAGTNAEVM MPA 200 QWEFQVGPAVGISAAADEIWVARYILERIT TEIAGVVVSFDPKPIPPGDWNGAGAHCNYSTKS 256 QWEFQ+GP GIS D +WVAR+IL R+ E GV+ +FDPKPIPPG+WNGAG H N+STK+ QWEFQIGPCEGISMMGDHLWVARFILHRVC CEDFGVIATFDPKPIPPGNWNGAGCHTNFSTKA 260 MREEGGYEIIKKAIIDKLGLRHKEHIAAY- ----GEGNERRLTGHH HHETADINTFLWGVAN NRG 312 MREE G + I++AII+KL RH+ HI AY G N RRLTG HHET++IN F GVAN NR MREENGLKYIEEAIIEKLSKRHQYHIRAYD DPKGGLDNARRLTGFH FHETSNINDFSAGVAN NRS 320 ASIRVGRDTEKEGKKGYFEDRRPASNMDPY YIVTSMIAETTIL 3353 ASIR+ R +E KKGYFEDRRP++N DP+ + VT + T +L ASIRIPRTVGQEKKKGYFEDRRPSANCDPF FSVTEALIRTCLL 3361 >AT5G45340 MDFSGLFLTLSSAAALFLCLLRFIAGVVRRSSSTKLPLPPGTM MGYPYVGETFQLYSQD QDPNVFFAAKQRRYGS SVFKTHVLGCPCVMISSPEAAKFVLVTKSHLL FKPTFPASKERRMLGKQAIFFHQGDYHHSKLRKLVLRAFMPDA AIRNMVPHIESIAQES ESLNSWDGTQLNTYQE EMKTYTFNVALISILG GKDEVYYREDLKRCYYY ILEKGYNSMPIINLPGTLFHKAMKARKKELAQILANILSKRRQ QNPSSHTDLLGSFMED EDKAGLTDEQIADNIIGVIFAARDTTASVLTWILKYLADNPTVLEAA VTEEQMAIRKDDKKEGESLTWEDTKKMMPLTYRVIQETLRAAT TILSFTFREAVEDVEY EYEGYLIPKGWKVLPL LFRNIHHNADIFSDPG GKFDPSRFEVAPKPNTT FMPFGSGIHSCCPGNELAKLEISVLIHHHLTTKYRWSIVGPSD DGIQYGPFALPQNGLP LPIALERKP GENE ID: 566603 CYP26B1 | ccytochrome P450, , family 26, subbfamily B, poly ypeptide 1 [Homo sapieens] (Over 10 PuubMed links)
Score = 200 bits (508), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 151/501 (30%), Positives = 245/501 (48%), Gaps = 53/501 (10%) Query 1 MDFSGLFLTLSAAALFLCL---------------LRFIAGVRRSSSTKLPLPPGTMGYPY 45 M F GL L + A L CL LR+ A R S KLP+P G+MG+P Sbjct 1 MLFEGLDLVSALATLAACLVSVTLLLAVSQQLWQLRWAA--TRDKSCKLPIPKGSMGFPL 58 Query 46 VGETFQLYSQDPNVFFAAKQRRYGSVFKTHVLGCPCVMISSPEAAKFVLVTKSHLFKPTF 105 +GET Q F ++++ +YG+VFKTH+LG P + ++ E + +L+ + HL + Sbjct 59 IGETGHWLLQGSG-FQSSRREKYGNVFKTHLLGRPLIRVTGAENVRKILMGEHHLVSTEW 117 Query 106 PASKERMLGKQAIFFHQGDYHSKLRKLVLRAFMPDAIRNMVPHIESIAQESLNSWDG--T 163 P S +LG + GD H RK+ + F +A+ + +P I+ + Q++L +W Sbjct 118 PRSTRMLLGPNTVSNSIGDIHRNKRKVFSKIFSHEALESYLPKIQLVIQDTLRAWSSHPE 177 Query 164 QLNTYQEMKTYTFNVALISILGKDEVYYREDLKRCYYILEKGYN---SMPINLPGTLFHK 220 +N YQE + TF +A+ +LG EDL + + ++ + S+P++LP + + + Sbjct 178 AINVYQEAQKLTFRMAIRVLLGFS--IPEEDLGHLFEVYQQFVDNVFSLPVDLPFSGYRR 235 Query 221 AMKARKELAQILANILSKRRQ-----NPSSHTDLL-GSFMEDKAGLTDEQIADNIIGVIF 274 ++AR+ L + L + ++ Q + S DLL S E +T +++ D + +IF Sbjct 236 GIQARQILQKGLEKAIREKLQCTQGKDYSDALDLLIESSKEHGKEMTMQELKDGTLELIF 295 Query 275 AARDTTASVLTWILKYLADNPTVLEAVTEEQMAIRKDKKEG----ESLTWEDTKKMPLTY 330 AA TTAS T ++ L +PTVLE + +E A G +L + + Sbjct 296 AAYATTASASTSLIMQLLKHPTVLEKLRDELRAHGILHSGGCPCEGTLRLDTLSGLRYLD 355 Query 331 RVIQETLRAATILSFTFREAVEDVEYEGYLIPKGWKVLPLFRNIHHNADIFSDPGKFDPS 390 VI+E +R T +S +R ++ E +G+ IPKGW V+ R+ H A +F D FDP Sbjct 356 CVIKEVMRLFTPISGGYRTVLQTFELDGFQIPKGWSVMYSIRDTHDTAPVFKDVNVFDPD 415 Query 391 RFEVAPKPNT-----FMPFGSGIHSCPGNELAKLEISVLIHHLTTKYRWS---------- 435 RF A + ++PFG G+ +C G LAKL + VL L + R+ Sbjct 416 RFSQARSEDKDGRFHYLPFGGGVRTCLGKHLAKLFLKVLAVELASTSRFELATRTFPRIT 475 Query 436 ---IVGPSDGIQYGPFALPQN 453 ++ P DG+ F L N Sbjct 476 LVPVLHPVDGLSVKFFGLDSN 496 >AT5G48375 MKFRALGLVLLLAVETCKAEEITCEETKPFTCNQTDRFNRKHFDDDFIFEGGKGRGLNVWDGFTHRYPEKGGPDLGNGDSTCGSYEHWQKDIDVMTELGV DGYRFSLAWSRIAPRESNQAGVKYYNDLIDGLLAKNITPFVTLFHWDLPQVLQDEYEGFLNHEIIDDFKDYANLCFKIFGDRVKKWITINQLYTVPTRGY AMGTDAPEPYIVAHNQLLAHAKVVHLYRKKYKPKQRGQIGVVMITRWFVPYDSTQANIDATERNKEFFLGWFMEPLTKGKYPDIMRKLVGRRLPKFNKKE AKLVKGSYDFLGINYYQTQYVYAIPANPPNRLTVLNDSLSAFSYENKDGPIGPWFNADSYYHPRGILNVLEHFKTKYGNPLVYITENGELLILSGCNVKG YFAWCLGDNYELWPSRSFHVSPFYLLHRKDKGAFPSFEA GENE ID: 197021 LCTL | lactase-like [Homo sapiens] (10 or fewer PubMed links) Score = 246 bits (628), Expect = 7e-65, Method: Compositional matrix adjust. Identities = 155/416 (37%), Positives = 219/416 (52%), Gaps = 71/416 (17%) Query 54 GRGLNVWDGFTHRYPEKGGPDLGN--GDSTCGSYEHWQKDIDVMTELGVDGYRFSLAWSR 111 G+G ++WD FTH G LGN D C Y Q+DI ++ EL V+ YRFSL+W R Sbjct 60 GKGPSIWDVFTH---SGKGKVLGNETADVACDGYYKVQEDIILLRELHVNHYRFSLSWPR 116 Query 112 IAP-----RESNQAGVKYYNDLIDGLLAKNITPFVTLFHWDLPQVLQDEYEGFLNHEIID 166 + P + N+ G+++Y+DLID LL+ NITP VTL HWDLPQ+LQ +Y G+ N + + Sbjct 117 LLPTGIRAEQVNKKGIEFYSDLIDALLSSNITPIVTLHHWDLPQLLQVKYGGWQNVSMAN 176 Query 167 DFKDYANLCFKIFGDRVKKWITINQLYTVPTRGYAMGTDAP-------EPYIVAHNQLLA 219 F+DYANLCF+ FGDRVK WIT + + +GY G AP Y AH+ + A Sbjct 177 YFRDYANLCFEAFGDRVKHWITFSDPRAMAEKGYETGHHAPGLKLRGTGLYKAAHHIIKA 236 Query 220 HAKVVHLYRKKYKPKQRGQIGVVMITRWFVPYD-STQANIDATERNKEFFLGWFMEPLTK 278 HAK H Y ++ KQ+G +G+ + W P D S +++A ER +F LGWF P+ Sbjct 237 HAKTWHSYNTTWRSKQQGLVGISLNCDWGEPVDISNPKDLEAAERYLQFCLGWFANPIYA 296 Query 279 GKYPDIMRKLVGR----------RLPKFNKKEAKLVKGSYDFLGINYYQTQYVYAIPANP 328 G YP +M+ +GR RLP F+ +E +KG+ DFLG+ ++ T+Y+ N Sbjct 297 GDYPQVMKDYIGRKSAEQGLEMSRLPVFSLQEKSYIKGTSDFLGLGHFTTRYI--TERNY 354 Query 329 PNRLTVLNDSLSAFSYENKDGPIG----PWFNADS---YYHPRGILNVLEHFKTKYGNPL 381 P+R SY+N I W + S Y P G +L +T+YG+P Sbjct 355 PSR--------QGPSYQNDRDLIELVDPNWPDLGSKWLYSVPWGFRRLLNFAQTQYGDPP 406 Query 382 VYITENG------------------------ELL--ILSGCNVKGYFAWCLGDNYE 411 +Y+ ENG E+L I G N+KGY +W L D +E Sbjct 407 IYVMENGASQKFHCTQLCDEWRIQYLKGYINEMLKAIKDGANIKGYTSWSLLDKFE 462 >AT5G65540 MALLGDDGRGFDLARKLEVSGVWRTWLGDSIYSSFHHYLSSPSTWEAFMRVDESKSRAQIQLQLRVRALLFDKATVSLFLRSNTIAASSSSSASISDVSS VAVSKLNPNYLQLHGDDVYYTLENASLESGFQREGGIRHNPSLTKSLSKPSFTSGTRGSESDFSNLSQRSRFEELPDTWYTQFISRYGFKYGMSVGGQES DKRTPEGMSTYLRVVDTHKRKRAPFLEDRSLAHMSRSSTHPSSGFDGSTSEDDILFLPETMFRMNCVPETALSPITRTQDNLKTEFYGVLDTLPQVTTRS HIMIERLGLMPEYHRMEERGVLRSRKAEKMGFSDDQAALVSRKVVARMLLTMGFEGATEVPIDVFSQLVSRHMSKLGRILKLLTDSYKKECSAMQLIKMF LNTTGYSNLGSLAEIVKDGTRNHPPPNQKQPQVLQQQLHLQQQASLRLPQQIQRQMHPQMQQMVNPQNFQQQQQLERMRRRPVTSPRPNMDMEKDRPLVQ VKLENPSEMAVDGNAFNPMNPRHQQQLQQQLRQQQQIAAMSNMQQQPGYNQFRQLASMQIPQMQTPTLGTVRAQPVKVEGFEQLMGGDSSLKHDSDDKLR SPPTK No significant homologies
Page 1 and 2: Text S1: Protein sequences and alig
Page 3 and 4: Query 293 Sbjct 331 Query 353 Sbjct
Page 5 and 6: Query 282 Sbjct 317 Query 342 Sbjct
Page 7 and 8: E CE+A+FKMDN LIDDRRIHVDFSQSV+ Sbjct
Page 9 and 10: 301 VLEEIESSRSA RKEYVQILAE CHRLYCEQ
Page 11 and 12: AT2G21330 MASSTATMLKASPVKSDWVKGQSLL
Page 13 and 14: Query 210 DDKSKKPLALMED--GKGGVFVRGL
Page 15 and 16: Query 842 ------------LDSLPREDISTKI
Page 17 and 18: Identities = 34/66 (51%), Positives
Page 19 and 20: MRGFASSASRIIATAAAASKSLNASTSSVNPKLSK
Page 21 and 22: + QI A I GD++ +AYAHELP+YG+ VGLTNYAA
Page 23 and 24: Sbjct 309 FAHR--EDGPGIPADIKLFDIFSQQ
Page 25 and 26: +WV + +G FN LTL +AL+ LF+VP+ Y++++ +
Page 27 and 28: Query 1847 -QTSTATGRLSIEEPNLQSVEHEV
Page 29 and 30: Query 432 CPFEQLTMTLFNFIKLFKKAHEENV
Page 31: REDSESPMKERRRRYENREVELLGDWQQSGGRGKE

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