Evolutionary relationships of liverworts with a special focus ... - Doria

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This thesis is based on the following original articles referred to in the text by their Roman numerals: I He-Nygrén, X., I. Ahonen, A. Juslén, D. Glenny, and S. Piippo. . 2004. Phylogeny of liverworts — beyond a leaf and a thallus. Pp. 87-118 in B. Goffinet, V. Hollowell & R. Magill (editors), Molecular Systematics of Bryophytes. Monographs in Systematic Botany from the Missouri Botanical Garden, Volume 98. © Missouri Botanical Garden Press II Ahonen, I. 2004. Molecular phylogeny of the liverwort order Porellales (Marchantiophyta, Jungermanniopsida). Pp. 168-188 in B. Goffinet, V. Hollowell & R. Magill (editors), Molecular Systematics of Bryophytes. Monographs in Systematic Botany from the Missouri Botanical Garden, Volume 98. © Missouri Botanical Garden Press III Ahonen, I., J. Muona, and S. Piippo. 2003. Inferring the Phylogeny of the Lejeuneaceae (Jungermanniopsida): A First Appraisal of Molecular Data. The Bryologist 106: 297-308. © American Bryological and Lichenological Society IV Ahonen, I. 2005. The taxonomical position of the genus Nipponolejeunea (Steph.) Hattori. Journal of the Hattori Botanical Laboratory 99: 319-342 (in press). © Hattori Botanical Laboratory V Ahonen, I., A. Sass-Gyarmati, and T. Pócs. 2005. Molecular, morphological, and taxonomic evaluation of the Ptychanthus striatus - complex. Acta Botanica Hungarica 47 (in press). © Akademiai Kiado VI Ahonen, I. 2004. Indels and direct optimization. Manuscript. © Inkeri Ahonen
Contributions The following table shows the main contributions of authors to studies I-VI. I II III IV V VI Original idea XH, IA IA IA, SP IA TP IA Molecular data XH, IA, AJ IA IA IA IA IA Morphology - - - IA AS, TP - Analyses: Direct optimization (POY) IA, XH IA JM IA IA IA Nona IA - - IA IA IA Paup - - - - IA MrBayes - - - IA IA - Manuscript preparation XH, IA, AJ, DG IA IA, JM IA IA, TP, AS IA Supervised by Professor Jaakko Hyvönen Department of Biological and Environmental Sciences Plant Biology University of Helsinki Professor Sinikka Piippo Finnish museum of Natural history Botanical Museum University of Helsinki Reviewed by Ph.D. John Engel The Field Museum of Natural History USA Professor Terry Hedderson University of Cape Town South Africa Examined by Professor S. Robbert Gradstein University of Göttingen Germany
Page 1 and 2: Evolutionary relationships of liver
Page 3: To Per, Anja, and Anton.
Page 8 and 9: 8 support to Schuster’s view (Gar
Page 10 and 11: 10 thalloids, complex thalloids, an
Page 12 and 13: 12 1984, Schuster and Janssens 1989
Page 14 and 15: 14 leaves with covering of epiphyll
Page 16 and 17: 16 (rbcL, trnL-trnF and ITS2), Grot
Page 18 and 19: 18 postulated that Lepidolaenineae
Page 20 and 21: 20 number of different alignments b
Page 22 and 23: 22 Szabo 1993, Kim and Jansen 1994,
Page 24 and 25: 24 besides Blasia pusilla, was not
Page 26 and 27: 26 in Study I Ptilidium pulcherrimu
Page 28 and 29: 28 confirmed by Groth-Malonek et al
Page 30 and 31: 30 during their geographic isolatio
Page 32 and 33: 32 Haplomitrium and Treubia include
Page 34 and 35: 34 details and features, but we sti
Page 36 and 37: 36 References Aagesen, L., Petersen
Page 38 and 39: 38 phylogenetic analysis. Pp. 1-36
Page 40 and 41: 40 Groth-Malonek, M. and Knoop, V.
Page 42 and 43: 42 2. Laurentii Salvii, Stockholm.
Page 44 and 45: 44 98. Rae, T. C. 1998: The logical
Page 46 and 47: 46 relationship and classification

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