PLoS Genetics

More documents

Recommendations

Info

Both Size Selection and Crosslinking are Necessary Auerbach and Euskirchen et al., PNAS, 2009 12
Aggregation Plot Expressed Genes (TSS) Pol II Input DNA 100-350 bp Naked DNA Input DNA 350-500 bp IgG Mappability MNase 13 Input DNA enriched 4x over background!
Page 1 and 2: Elucidating Transcriptional Regulat
Page 3 and 4: g DNA folding Transcriptional Regul
Page 5 and 6: ChIP-Seq 5
Page 7 and 8: Highlights from Key Papers Nature B
Page 9 and 10: Origin of Input DNA from Nuclear Ly
Page 11: Reference Types We Examined Input D
Page 15 and 16: Regions Associated with Transcripti
Page 17 and 18: Summary and Bioinformatics Contribu
Page 19 and 20: Considerations with Early Peak Call
Page 21 and 22: Chromatin Remodeling: Why You Shoul
Page 23 and 24: Role in Cancer SWI/SNF subunit Canc
Page 25 and 26: Project Overview Analysis Questions
Page 27 and 28: How to Combine Data 27
Page 29 and 30: SWI/SNF Co-occurrences CTCF, Pol II
Page 31 and 32: Pathway Analysis Euskirchen and Aue
Page 33 and 34: Summary and Bioinformatics Contribu
Page 35 and 36: Exploring Transcription, DNA Foldin
Page 37 and 38: So How Does ChIA-PET Work (Cliffs N
Page 39 and 40: The Textbook Version 39
Page 41 and 42: Second Goal - Formation of Protein
Page 43 and 44: Gene Expression Characteristics Li,
Page 45 and 46: IRS1 and T2D: Long Range Interactio
Page 47 and 48: Bioinformatics Contributions Integr
Page 49 and 50: Combining RNAPII ChIP-Seq with RNA-
Page 51 and 52: CAPE: Coupled Analysis of Polymeras
Page 53 and 54: Sample CAPE-compare Output (raw) 53
Page 55 and 56: Sample CAPE-compare Output (Venn) 5
Page 57 and 58: Other Work While at Yale Co-author
Page 59: Questions 59

PLoS Genetics

Create successful ePaper yourself

Delete template?

Save as template?