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Cell Biology Annual Report 2010-11 (FY 2011) - Department of Cell ...

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CBP Faculty Research Summaries<br />

<strong>Cell</strong> <strong>Biology</strong> and Physiology<br />

<strong>Annual</strong> <strong>Report</strong><br />

in the pathogenesis <strong>of</strong> tumor formation. The long-term goal is to understand the biochemistry <strong>of</strong><br />

these protein degradation pathways and to develop new intervention strategies based on an<br />

understanding <strong>of</strong> proteolytic regulation to combat cancer and treat other human disease. To<br />

achieve this, we plan to develop mutidisciplinary approaches, including biochemical and genetic<br />

analyses as well as chemical genetic techniques. We will apply these methods using several<br />

systems including functional proteomics, mammalian tissue culture cells and mouse model<br />

system.<br />

Simon C. Watkins, Ph.D.<br />

Pr<strong>of</strong>essor, Vice Chairman <strong>of</strong> <strong>Department</strong><br />

Director <strong>of</strong> Center for Biologic Imaging<br />

The application <strong>of</strong> advanced imaging tools to the field <strong>of</strong> immunology is constantly revealing<br />

new facets <strong>of</strong> cellular and molecular behavior within the immune system. The goals <strong>of</strong> my<br />

research program are two-fold. To develop novel quantitative fluorescent based assays using<br />

optical microscopy, and secondly to develop novel imaging platforms for use in health and<br />

disease. Recent accomplishments have been the development <strong>of</strong> multiple new high speed high<br />

resolution imaging platforms for multidimensional imaging <strong>of</strong> model systems. We are now<br />

applying these tools to high speed imaging <strong>of</strong> the physiology and cell biology <strong>of</strong> the regulation<br />

<strong>of</strong> vascular tone in the Zebra fish.<br />

Christine Wu, Ph.D.<br />

Associate Pr<strong>of</strong>essor<br />

During the past decade, biological mass spectrometry has expanded into a mainstream and<br />

indispensable analytical field. My lab is focused on the development <strong>of</strong> proteomic methods and<br />

technology for the characterization and quantification <strong>of</strong> proteins using mass spectrometry. In<br />

particular, we are interested in developing optimized proteomic strategies compatible with the<br />

analysis <strong>of</strong> integral membrane proteins. Recent experimental strategies utilize the use <strong>of</strong> global<br />

comparative bottom-up proteomic pr<strong>of</strong>iling (LC-MS/MS) followed by targeted hypothesisdriven<br />

strategies and the development <strong>of</strong> multiplexed SRM assays. These optimized workflows<br />

are then applied towards the identification <strong>of</strong> protein biomarkers <strong>of</strong> disease and the<br />

understanding <strong>of</strong> disease mechanisms (including breast cancer, liver disease, heart failure, and<br />

neural disorders).<br />

32<br />

Alexander Sorking. Colocalization and FRET between YFP-YEV-1B and CFP-Hrs in endosomes.

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