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Breast Cancer whole genome sequences-Nature May 2016

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RESEARCH<br />

ARTICLE<br />

A. Survival (years) by Rearrangement Signature<br />

100<br />

90<br />

80<br />

70<br />

OS (%)<br />

60<br />

50<br />

p= 0.235<br />

40<br />

30<br />

20<br />

10<br />

0<br />

A :n= 60<br />

B :n= 54<br />

C :n= 60<br />

D :n= 61<br />

E :n= 89<br />

F :n= 36<br />

G :n= 66<br />

0 2 4 6 8 10<br />

Time ( Years)<br />

B. Age<br />

C. Grade<br />

D. Menopausal status<br />

80<br />

70<br />

100<br />

80<br />

1<br />

2<br />

3<br />

100<br />

80<br />

post<br />

peri<br />

pre<br />

60<br />

60<br />

60<br />

Age<br />

50<br />

%<br />

40<br />

%<br />

40<br />

40<br />

20<br />

20<br />

30<br />

A B C D E F G<br />

Rearrangement Signature cluster<br />

0<br />

A B C D E F G<br />

Rearrangement Signature cluster<br />

0<br />

A B C D E F G<br />

Rearrangement Signature cluster<br />

E. ER status<br />

F. Immune Response metagene panel<br />

G. Lymphocytic infiltration score<br />

%<br />

100<br />

80<br />

60<br />

40<br />

negative<br />

positive<br />

score<br />

5<br />

4<br />

3<br />

2<br />

1<br />

%<br />

100<br />

80<br />

60<br />

40<br />

nil<br />

mild<br />

moderate<br />

severe<br />

20<br />

0<br />

20<br />

0<br />

A B C D E F G<br />

Rearrangement Signature cluster<br />

−1<br />

A B C D E F G<br />

Rearrangement Signature cluster<br />

0<br />

A B C D E F G<br />

Rearrangement Signature cluster<br />

Extended Data Figure 6 | Rearrangement cluster groups and associated features. a, Overall survival (OS) by rearrangement cluster group. b, Age of<br />

diagnosis. c, Tumour grade. d, Menopausal status. e, ER status. f, Immune response metagene panel. g, Lymphocytic infiltration score.<br />

© <strong>2016</strong> Macmillan Publishers Limited. All rights reserved

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