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A Chloroplast DNA Phylogeny of Solanum Section Lasiocarpa

A Chloroplast DNA Phylogeny of Solanum Section Lasiocarpa

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186 SYSTEMATIC BOTANY<br />

[Volume 29<br />

al. (1995) in their analyses <strong>of</strong> cp<strong>DNA</strong> restriction sites<br />

and combined cp<strong>DNA</strong>, morphological, and isozyme<br />

data. However, their analyses <strong>of</strong> morphological and<br />

isozyme data, alone and in combination, placed S. hirtum<br />

within this clade, whereas this species forms an<br />

isolated basal branch in the trn trees. Data from crossing<br />

studies and karyotype analyses are equivocal with<br />

respect to support for this large group (Heiser 1972,<br />

1989; Bernardello et al. 1994).<br />

Within this large clade, coded indel data provide<br />

some support for the association <strong>of</strong> S. hyporhodiumwith<br />

S. felinum. In analyses without the coded indel data, all<br />

accessions <strong>of</strong> these two species along with S. vestissimum<br />

form a basal grade in the large clade described<br />

above, with S. vestissimum S432 comprising the basal<br />

branch in the entire large clade. All three <strong>of</strong> these taxa<br />

are high-elevation cloud forest species native to Venezuela<br />

and northern Colombia. Whalen et al. (1981) considered<br />

the three species to be closely related on morphological<br />

grounds. <strong>Solanum</strong> felinum and S. vestissimum<br />

are extremely similar morphologically, with S. hyporhodium<br />

less so (Bruneau et al. 1995). <strong>Solanum</strong> hyporhodium<br />

and S. vestissimum clustered together in phenetic and<br />

cladistic analyses <strong>of</strong> isozyme data (Whalen and Caruso<br />

1983; Bruneau et al. 1995); S. felinum was not included<br />

in these studies. Crossing and karyotypic studies did<br />

not support a relationship among the three taxa (Heiser<br />

1972, 1989; Bernardello et al. 1994), although S. hyporhodium<br />

and S. felinum had similar chromosome characteristics<br />

(Bernardello et al. 1994). Although the three<br />

taxa are closely associated in most <strong>of</strong> the trn trees, they<br />

do not form a monophyletic group. In addition, the<br />

S432 accession <strong>of</strong> S. vestissimum from Colombia is divergent<br />

from the other four representatives <strong>of</strong> the<br />

group, all <strong>of</strong> which are from Venezuela. Heiser (2001)<br />

noted that accessions identied as S. vestissimum from<br />

Colombia and Venezuela would not cross with each<br />

other and differed in their crossing behavior with S.<br />

quitoense. Further taxonomic work on species limits in<br />

this complex and more intensive sampling with more<br />

variable genes is warranted to ascertain the position <strong>of</strong><br />

these high altitude Colombian and Venezuelan taxa.<br />

Two questions that have been intensively studied<br />

with respect to this group <strong>of</strong> species concern the wild<br />

relatives <strong>of</strong> S. quitoense and the origin and relationships<br />

<strong>of</strong> the two Old World taxa <strong>of</strong> section <strong>Lasiocarpa</strong>. <strong>Solanum</strong><br />

quitoense, the lulo or naranjilla, is a commonly<br />

cultivated fruit crop in Andean South America. Its<br />

range has recently spread to include Central America,<br />

where it is naturalized in Panama and Costa Rica. <strong>Solanum</strong><br />

quitoense has been considered by some to be<br />

known only from cultivation, although spiny and feral<br />

forms exist in northwestern South America. Heiser<br />

(1972) proposed on morphological grounds that S. quitoense<br />

is most closely related to S. candidum, but the<br />

two species have different habitat preferences and hy-<br />

bridize only with difculty. Although S. quitoense and<br />

S. candidum are not sister taxa in the trn trees, there is<br />

little character support and resolution in this area <strong>of</strong><br />

the tree and a close relationship between the two taxa<br />

cannot be ruled out. However, the trn data refute hypotheses<br />

<strong>of</strong> close associations between S. quitoense and<br />

S. hirtum, S. pectinatum, S. stramonifolium, and S. sessiliorum.<br />

Likewise, the relationships <strong>of</strong> the two Asian disjuncts,<br />

S. repandum and S. lasiocarpum, have been a matter<br />

<strong>of</strong> debate. Whalen et al. (1981) and Whalen and<br />

Caruso (1983) suggested that S. repandum and S. lasiocarpum<br />

were not sister taxa, but instead that S. repandum<br />

was allied to and perhaps conspecic with S. sessiliorum,<br />

whereas S. lasiocarpum was most closely related<br />

to S. candidum. Conversely, Heiser considered S.<br />

repandum and S. lasiocarpum to be closely related and<br />

perhaps conspecic (as S. ferox) and that S. candidum<br />

was sister to the Asian taxa (Heiser 1986, 1987, 1996).<br />

The trn data, as well as previous data from crossing<br />

and karytotype studies and analyses <strong>of</strong> cp<strong>DNA</strong> and<br />

morphological characters (Heiser 1986, 1987, 1996; Bernardello<br />

et al. 1994; Bruneau et al. 1995) supports the<br />

close relationship between S. repandum and S. lasiocarpum<br />

and thus Heiser’s hypothesis. Furthermore, S. candidum<br />

emerges as a member <strong>of</strong> the S. repandum/S. lasiocarpum<br />

clade, conforming to Heiser’s ideas <strong>of</strong> relationships.<br />

However, S. repandum and S. lasiocarpum did<br />

not form a monophyletic group in the trn analyses;<br />

rather, one accession <strong>of</strong> S. repandum formed a clade<br />

with the two S. pseudolulo accesssions. This result<br />

should not be over-interpreted, however, since there is<br />

little character support for the identication <strong>of</strong> lineages<br />

within the large clade that includes S. repandum, S. lasiocarpum,<br />

S. pseudolulo, S. candidum, S. quitoense, S. hyporhodium,<br />

S. vestissimum, and S. felinum.<br />

In general, the trn trees are quite similar to those<br />

obtained from analyses <strong>of</strong> cp<strong>DNA</strong> restriction site data<br />

(cf. Fig. 1 in Bruneau et al. 1995). This is not surprising,<br />

given that the chloroplast genome is a single linked<br />

non-recombining genetic entity (Doyle 1992). Further<br />

molecular studies are underway using more variable<br />

nuclear genes in order to achieve better resolution <strong>of</strong><br />

phylogenetic relationships among the species <strong>of</strong> section<br />

<strong>Lasiocarpa</strong>, to increase support for previously identied<br />

clades, and to compare phylogenies derived<br />

from maternally inherited chloroplast genes with those<br />

based on biparentally inherited nuclear markers.<br />

ACKNOWLEDGMENTS. I thank C. Heiser, A. Bruneau, J. Miller,<br />

P. Diggle, R. Olmstead, L. D. Gómez, and the Botanic Garden at<br />

the University <strong>of</strong> Nijmegen, The Netherlands, for providing seed<br />

and <strong>DNA</strong> samples; B. Hammel and R. Aguilar for eld assistance;<br />

R. Dirig for information regarding vouchers at BH; C. Heiser, A.<br />

Bruneau, E. E. Dickson, J. Miller, P. Diggle, S. Knapp, and D. Spooner<br />

for comments on the manuscript and help with sample and<br />

voucher information; M. Johnson, A. Freeman, S. King-Jones, A.<br />

Egan, A. Moore, and K. Klatt for laboratory assistance; and C.

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