- Page 1 and 2: ABSTRACT Title of Document: PATTERN
- Page 3 and 4: PATTERNS OF DIVERSIFICATION IN PHYT
- Page 5 and 6: Note: This dissertation should not
- Page 7 and 8: Table of Contents Foreword.........
- Page 9 and 10: List of Tables Table 2.1. Summary o
- Page 11 and 12: Chapter 1: Introduction With nearly
- Page 13 and 14: Determining the historical timing o
- Page 15 and 16: compared to the history of the host
- Page 17 and 18: The “escape and radiation” mode
- Page 19 and 20: Conservation of Host-Taxon Associat
- Page 21 and 22: Fig. 2.1. Frequency of host shifts
- Page 23 and 24: analysis with better control for ph
- Page 25 and 26: feeding lineage, there have been re
- Page 27 and 28: as the phylogenetic evidence cannot
- Page 29 and 30: Conservatism, Host Shifts, and Spec
- Page 31 and 32: Table 2.1. Summary of host and dist
- Page 33 and 34: The study of host range evolution i
- Page 35 and 36: Table 2.2. Synopsis of nine recent
- Page 37 and 38: of transition to and from specializ
- Page 39 and 40: Several of the foregoing hypotheses
- Page 41 and 42: (reviews in Magallón 2004, Welch a
- Page 43: Table 2.3. Synopsis of 18 recent st
- Page 47 and 48: the most basal seed plants. The fiv
- Page 49 and 50: Aphids, agromyzids and other groups
- Page 51 and 52: apidly multiplying lineage” (pg.
- Page 53 and 54: diversification effects known (Coyn
- Page 55 and 56: sound detectors allowing adults to
- Page 57 and 58: insect diversification and correlat
- Page 59 and 60: comparisons (Table 2.4). The only p
- Page 61 and 62: We have focused on phylogenies at t
- Page 63 and 64: 6. Because phylogenetic studies dir
- Page 65 and 66: Chapter 3: Phylogeny of the Leaf-mi
- Page 67 and 68: phylogenetic relationships between
- Page 69 and 70: Chromatomyia alone is monophyletic,
- Page 71 and 72: Fig. 3.1. Phylogeny of host plant f
- Page 73 and 74: Table 3.1. Species sampled for this
- Page 75 and 76: LocColl- GenBank Accession # Specie
- Page 77 and 78: LocColl- GenBank Accession # Specie
- Page 79 and 80: newly obtained for this study, exce
- Page 81 and 82: Table 3.2. Primers sequences used f
- Page 83 and 84: esults. The tree of highest likelih
- Page 85 and 86: elow 50% for many deeper nodes of t
- Page 87 and 88: Phytomyza s. nov. Phytomyza main li
- Page 89 and 90: Within Phytomyza sensu novo, the tw
- Page 91: was monophyletic with strong suppor
- Page 94 and 95:
monophyly of the entities Phytomyza
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Fig. 3.5. Nucleotide sequence of va
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accommodate the incongruous charact
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Table 3.4. Revised species groups o
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excluded from Phytomyza group min.
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particularly primitive characterist
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including species feeding on either
- Page 108 and 109:
eduction of the paired tubules of t
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For reasons including the need to c
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are herbaceous. The inclusion of P.
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(Spencer 1969), is surprising, but
- Page 116 and 117:
) a slipper-shaped, usually lightly
- Page 118 and 119:
apodeme, and possibly also by a red
- Page 120 and 121:
Hering), both possibly associated w
- Page 122 and 123:
pupate internally in the host plant
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The phylogenetic position of P. gym
- Page 126 and 127:
Although a detailed investigation o
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phylogenies between the plant speci
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pronounced expansion of open habita
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of about 750 described species in t
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Region # total described agromyzid
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difficult. Despite this, and althou
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leaf mines in Platanus (Crane and J
- Page 140 and 141:
pattern. Most of the Mexican Hat sp
- Page 142 and 143:
partitions was not available from o
- Page 144 and 145:
independent estimates not based on
- Page 146 and 147:
estimation, integrating over the li
- Page 148 and 149:
with supplementary results obtained
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diversification rate in these clade
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warming event of approximately 24 M
- Page 154 and 155:
strong (83%) support in the bootstr
- Page 156 and 157:
Table 4.3. Selected clades of Phyto
- Page 158 and 159:
Ancestral host reconstruction Ances
- Page 160 and 161:
Fig. 4.4. Clade size vs. clade age
- Page 162 and 163:
DT (based on benthic isotope ratios
- Page 164 and 165:
intervals (Table 4.2), especially g
- Page 166 and 167:
albipennis/ranunculella grps., nota
- Page 168 and 169:
clades of Lamiales (e.g. Orobanchac
- Page 170 and 171:
emaining three clades (A2, A3, A5),
- Page 172 and 173:
event may have also occurred very r
- Page 174 and 175:
paleontological data, as well as so
- Page 176 and 177:
the Phytomyza group which are not w
- Page 178 and 179:
tropical lineages have simply had m
- Page 180 and 181:
allow us to reliably estimate the s
- Page 182 and 183:
widespread climate change and Phyto
- Page 184 and 185:
fauna as “a host of intriguing qu
- Page 186 and 187:
Phytomyza cecidonomia Hering, 1937
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Phytomyza conii Hering, 1931 [PA] (
- Page 190 and 191:
Phytomyza orientalis Spencer, 1962
- Page 192 and 193:
Phytomyza nemopanthi Griffiths & Pi
- Page 194 and 195:
Phytomyza thalictricola Hendel, 192
- Page 196 and 197:
Phytomyza nigritella Zetterstedt, 1
- Page 198 and 199:
Literature Cited Agrawal, A. A., an
- Page 200 and 201:
Bokma, F. 2003. Testing for equal r
- Page 202 and 203:
Cook, L. G., and P. J. Gullan. 2004
- Page 204 and 205:
Drummond, A. J., and A. Rambaut. 20
- Page 206 and 207:
of the Compositae. Biol. Skr. 55: 3
- Page 208 and 209:
Grimaldi, D. A. 1999. The co-radiat
- Page 210 and 211:
Janis, C. M. 1993. Tertiary mammal
- Page 212 and 213:
Kumada, T. 1984. K y ju no pisufure
- Page 214 and 215:
McAlpine, J. F. 1989. Phylogeny and
- Page 216 and 217:
Nee, S., T. G. Barraclough, and P.
- Page 218 and 219:
Pellmyr, O. 2003. Yuccas, yucca mot
- Page 220 and 221:
Rundle, H. D. and P. Nosil. 2005. E
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adiation: the evolutionary biology
- Page 224 and 225:
Strong, D. R., J. H. Lawton, and R.
- Page 226 and 227:
Vrba, E. S. 1985. Environment and e
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Specialization, speciation, and rad