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Nested Designs - Scholar

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other hand, have fixed effects. The investigator is interested in the effects of these five specific<br />

hybrids. They are not randomly selected representatives of a larger population of hybrids. Thus,<br />

their effects are fixed rather than random.<br />

Ott and Longnecker (2001, Section 17.1) have these definitions:<br />

In a fixed-effects model for an experiment, all the factors in the experiment have<br />

a predetermined set of levels and the only inferences are for the levels of the<br />

factors actually used in the experiment.<br />

In a random effects model for an experiment, the levels of factors used in the<br />

experiment are randomly selected from a population of possible levels. The<br />

inferences from the data in the experiment are for all levels of the factors in the<br />

population from which the levels were selected and not only the levels used in the<br />

experiment.<br />

In a mixed effects model for an experiment, the levels of some of the factors used<br />

in the experiment are randomly selected from a population of possible levels,<br />

whereas the levels of the other factors in the experiment are predetermined. The<br />

inferences from the data in the experiment concerning the factors with fixed levels<br />

are only for the levels if the factors used in the experiment, whereas inferences<br />

concerning factors with randomly selected levels are for all levels of the factors in<br />

the population from which the levels were selected.<br />

D e , or by<br />

Notation. It would make sense to denote the random effect of leaf l by ijkl<br />

<br />

D , B, C eijkl<br />

, or even by e eijklbecause<br />

it is a nested effect just like B and C. But the<br />

ijkl<br />

l ijk<br />

fact is that all of the error terms in Anova are always random effects, and, being replicates, are<br />

necessarily nested within other effects.<br />

It is traditional to represent fixed effects by Greek letters and random effects by English letters.<br />

nested01.docx 4 4/5/2012<br />

l ijk

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