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QM - Accelrys

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Summary/ Future Plans<br />

• <strong>QM</strong>/MM methods have been shown to provide improvement over<br />

pure force field (CHARMm) calculations<br />

• <strong>QM</strong>/MM methods have been applied in real-life computational tasks<br />

– Improved partial charges for docking<br />

– Modeling of special interactions such as cation-pi<br />

– Refinement of heme-containing systems<br />

– Optimization of metalloprotein active sites<br />

• accurate interaction energies<br />

• Ongoing validation<br />

– <strong>QM</strong>/MM-based scoring function<br />

– Comparison of DMol3 ESP charges with AM1-BCC, others<br />

– Torsion profiles (ΔE vs. torsional angle) for select small molecules<br />

• Future developments on <strong>QM</strong>/MM will be exclusively based on<br />

customer feedback<br />

– <strong>QM</strong>/MM based scoring function<br />

– Semi-empirical methods for <strong>QM</strong><br />

– Modeling reaction mechanisms<br />

© 2007 <strong>Accelrys</strong>, Inc.<br />

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