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ms2: A Molecular Simulation Tool for Thermodynamic Properties

ms2: A Molecular Simulation Tool for Thermodynamic Properties

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TICSu(n) = (rc +τ) 2n+3 −(rc −τ) 2n+3<br />

4σ2n rc +<br />

τ(n+1)(2n+3)<br />

(rc +τ) 2n+4 −(rc −τ) 2n+4<br />

4σ2n , (26)<br />

τ(n+1)(2n+3)(2n+4)<br />

TISSu(n) =− (rc +τ+) 2n+4 −(rc +τ−) 2n+4 −(rc −τ−) 2n+4 +(rc −τ+) 2n+4<br />

8σ2n rc+<br />

τ1τ2(n+1)(2n+3)(2n+4)<br />

The termsr+ andr+ are defined by<br />

(rc +τ+) 2n+5 −(rc +τ−) 2n+5 −(rc −τ−) 2n+5 +(rc −τ+) 2n+5<br />

8σ 2n τ1τ2(n+1)(2n+3)(2n+4)(2n+5)<br />

.<br />

(27)<br />

τ+ = τ1 +τ2 , (28)<br />

τ+ = τ1 −τ2 , (29)<br />

where τ1 and τ2 define the distance between sites 1 and 2, respectively, to the center of mass of the molecules<br />

they belong to.<br />

The correction of the pressure <strong>for</strong> the center of mass cut-off is given by<br />

∆p L∗ = −2<br />

3 πρ2<br />

⎧<br />

<br />

TICCp(−6)−TICCp(−3)<br />

NC NC NLJ,i NLJ,j ⎪⎨<br />

<br />

<br />

xixj4ε TICSp(−6)−TICSp(−3)<br />

i=1 j=1 α=1 β=1 ⎪⎩ <br />

TISSp(−6)−TISSp(−3) .<br />

These expressions follow the same naming scheme as <strong>for</strong> the internal energy correction. The functionsTICCp,<br />

TICSp andTISSp are defined by<br />

TICCp(n) = 2n·TICCu(n) , (31)<br />

TICSp(n) = − (rc +τ) 2n+2 −(rc −τ) 2n+2<br />

4σ2n r<br />

τ(n+1)<br />

2 c −3·TICSu(n) , (32)<br />

TISSp(n) = − (rc +τ+) 2n+3 −(rc +τ−) 2n+3 −(rc −τ−) 2n+3 +(rc −τ+) 2n+3<br />

8σ2n r<br />

τ1τ2(n+1)(2n+3)<br />

2 c −3·TISSu(n) . (33)<br />

8<br />

(30)

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