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Alice Rotini - FedOA - Università degli Studi di Napoli Federico II

Alice Rotini - FedOA - Università degli Studi di Napoli Federico II

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RAPD genetic analysis<br />

RESULTS<br />

The overall percentage of polymorphism in the S. Marinella meadow,<br />

obtained on 2005 samples through the calculation of amplified polymorphic and<br />

monomorphic fragments, was 63.41%.<br />

All the 10 primers gave high reproducibility of their electrophoresis pattern<br />

both in the signal intensity and in the number of bands for each <strong>di</strong>fferent analysis<br />

performed.<br />

Cluster analysis (fig. 3.6) confirmed that similarity between samples is very<br />

high (the highest genetic <strong>di</strong>stance being 0.82). The average of all similarity<br />

coefficients among the samples was 0.87±0.03. The Mantel test comparing Nei's<br />

<strong>di</strong>stance and cophenetic matrices had a strong and statistically significant<br />

correlation with a value of r = 0.9 as a measure goodness of fit for cluster analysis.<br />

Fig. 3.6. UPGMA phenogram constructed from the matrix of RAPD-based genetic <strong>di</strong>stances<br />

among P. oceanica samples at S. Marinella.<br />

Antioxidant enzyme activity and photosynthetic pigments<br />

A protocol for the activity determination of two enzymes involved in<br />

antioxidant defence (DHAR, dehydroascorbate reductese, and APx, ascorbate<br />

peroxidase) was developed for the first time on P. oceanica leaves. Preliminary data<br />

on S. Marinella and Monterosso 2010 samples are reported in table 3.4 and fig. 3.7.<br />

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