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Biotechnological Tools and Techniques

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<strong>Biotechnological</strong> <strong>Tools</strong> <strong>and</strong> <strong>Techniques</strong><br />

Molecular Geneticists use many different types of tools in order to aid in the<br />

investigation of genetic disorders, alteration of genetic makeup of many<br />

organisms, or anaylze the samples collected in criminal investigations.<br />

Restriction Endonucleases (restriction enzymes)<br />

These are enzymes that cleave (or cut) the double str<strong>and</strong>ed DNA molecule into fragments at specific<br />

points.<br />

There are many different types of restriction enzymes<br />

formed by various Bacteria that can be used to cut the DNA<br />

str<strong>and</strong>s at different locations. Bacteria use this ability to<br />

protect themselves from invading viruses by chopping<br />

them into pieces when they enter. These diagrams show<br />

EcoRI restriction e<br />

<br />

Each type of restriction enzyme will recognize a particular set of<br />

nucleotides. This is known as the recognition site.<br />

Restriction enzymes are named by the following things:<br />

HindIII<br />

H represents genus Haemophilus<br />

in-­‐represents species influenza<br />

d represents the strain Rd<br />

III the third restriction enzyme isolated from this strain


Methylases<br />

These are specific enzymes that add a methyl (CH 3 ) group to the recognition<br />

site to prevent a restriction enzyme from attaching <strong>and</strong> cleaving a DNA<br />

fragment into pieces.<br />

DNA Ligase<br />

This enzyme is used by the DNA to join fragments together. It is used during DNA replication as well as<br />

after restriction enzymes cut apart different pieces of DNA.<br />

Gel Electrophoresis<br />

Once pieces of DNA have been cut out of the full<br />

DNA molecule, they can be separated <strong>and</strong> sorted on<br />

the basis of size.<br />

DNA is negatively charged because of the phosphate<br />

group.<br />

The larger the piece of DNA the greater the size <strong>and</strong><br />

negativity of the molecule.<br />

Electrodes are hooked up to the sample <strong>and</strong> the<br />

negatively charged particles move toward the<br />

positive + electrode. The smaller the piece, the<br />

farther it will move.<br />

Each sample that is gathered will be analyzed using restriction enzymes (cut into<br />

pieces) <strong>and</strong> then run through gel electrophoresis.<br />

Samples that match or people who are related will have matching fragments of<br />

DNA.<br />

Who is guilty of this crime?


Plasmids<br />

Plasmids are small circular piece of DNA that can exit <strong>and</strong> enter<br />

bacterial cells.<br />

Bacteria cells can incorporate Plasmids, <strong>and</strong> express the proteins<br />

that are coded for in the plasmids.<br />

Insulin creation<br />

Originally diabetic patients required either insulin harvested<br />

from cadaver pancreases or insulin from bovine or pig source.<br />

Once Plasmids were discovered bacterial plasmids were<br />

inserted with the human insulin gene. The bacteria created the<br />

insulin through Protein synthesis. The human insulin is then<br />

harvested by chemical processes.<br />

Transformation<br />

The introduction of foreign DNA usually as a plasmid or virus, into a bacterial cell. Plasmids can be used<br />

as vectors (a method of transferring DNA into a host cell). If a bacterium will accept a plasmid it is called<br />

a Competent Cell. Most cells can be made to be competent by chemically inducing with Calcium<br />

Chloride.

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