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The role of chemoinformatics in the design of a comprehensive drug ...

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Knowledge-Based Virtual Screen<strong>in</strong>g – MDM4/2<br />

Compounds From In-house MDM2 Assays and Similars<br />

‣ Hit-f<strong>in</strong>d<strong>in</strong>g and Hit-to-lead assays - compounds with IC50 < 50 µM (650)<br />

‣ FCFP4 similarity search (1873)<br />

‣ Hopfen QSAR (5000)<br />

Literature and Patent M<strong>in</strong><strong>in</strong>g<br />

‣ WOMBAT Literature Data and 14 Patent families from MDL Patent Database<br />

‣ FCFP4 similarity search (675) and NB model (5000)<br />

‣ FEPOPS (1000) similarity search, Substructure search (1707)<br />

HTD<br />

‣ Homology model based on SPIRO-OXINDOLE and NUTLIN MDM2 structures<br />

‣ Constra<strong>in</strong>ed SP Glide dock<strong>in</strong>g<br />

‣ Selection <strong>of</strong> top 20000 Compounds<br />

UNITY Search<strong>in</strong>g<br />

‣ Homology model based on SPIRO-OXINDOLE and NUTLIN MDM2 structures<br />

‣ Constra<strong>in</strong>ed search: Hydrophobic centers and HBonds (49305)<br />

‣ Constra<strong>in</strong>ed SP Glide dock<strong>in</strong>g<br />

‣ Selection <strong>of</strong> top 20000 Compounds<br />

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| Obernai| 20.06.10 | Edgar Jacoby

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