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Protocol for TotalScript™ RNA-Seq Kit

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TotalScript <strong>RNA</strong>-<strong>Seq</strong> <strong>Kit</strong><br />

7. Appendix<br />

Appendix A. Bioanalyzer Profile Of A TotalScript <strong>RNA</strong>-<strong>Seq</strong> Library<br />

A TotalScript <strong>RNA</strong>-<strong>Seq</strong> library was made from 5 ng of random primed Universal Human<br />

Reference <strong>RNA</strong> (UHR) using the TotalScript Optimized Buffer as described in Part 3.A of<br />

the procedure.<br />

Appendix B. It is recommended to use the Control <strong>RNA</strong> as a positive control <strong>for</strong> library<br />

prep to determine that all the steps of the protocol are followed as directed.<br />

1. Thaw the Control <strong>RNA</strong> and keep on ice. Remove 1 ul of the Control <strong>RNA</strong> and place<br />

in a fresh RNase-free tube, then add 99 ul of Nuclease-free water and mix well. Keep<br />

diluted Control <strong>RNA</strong> on ice.<br />

2. Set up the following reaction, as per step 3.A.1. of the TotalScript cDNA Synthesis<br />

procedure:<br />

2 μl 1:100 diluted Control <strong>RNA</strong><br />

2.5 μl TotalScript First-Strand Buffer<br />

1 μl Random Hexamer Primers<br />

12.5 μl Nuclease-free water<br />

18.0 μl Total<br />

3. Place the samples in a thermocycler with a heated lid. Heat <strong>for</strong> 2 minutes at 65°C,<br />

then hold at 4°C.<br />

4. Proceed to Part 3.B, 1st Strand cDNA synthesis.<br />

5. At Step 4.E. PCR Amplification:<br />

a. Amplify the sample <strong>for</strong> 12 cycles and purify the reaction as directed in Part 4.F. of<br />

the protocol.<br />

b. Run 1 ul on a bioanalyzer using a high sensitivity chip.<br />

10 www.epicentre.com

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