next-generation sequencing & analysis - Chagall
next-generation sequencing & analysis - Chagall
next-generation sequencing & analysis - Chagall
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70 short-‐read aligners <br />
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BWA <br />
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BarraCUDA u<br />
Bfast <br />
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BioScope u<br />
Bow1e/Bow1e2 u<br />
CLC bio u<br />
CloudBurst u<br />
cross_match u<br />
Eland/ELAND2 u<br />
GEM <br />
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GMAP/GSNAP u<br />
GenomeMapper u<br />
GensearchNGS u<br />
GnuMap u<br />
Karma <br />
LAST <br />
MAQ <br />
MOM <br />
Mosaik <br />
MrFast/MrsFast <br />
NovoAlign <br />
PASS <br />
PerM <br />
RMAP <br />
RazerS <br />
SHRiMP <br />
SHrec <br />
SOAP/SOAP2 <br />
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SSAHA2 <br />
STAR <br />
SToRM <br />
Segemehl <br />
SeqMap <br />
Slider/SliderII <br />
Srprism <br />
Stampy <br />
Vmatch <br />
ZOOM <br />
rNA <br />
subread
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