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Recommended HardwareSupported <strong>GPU</strong>s (examples, not exhaustive)Hardware Version 3.5• Kepler K20 / K20X• GTX TitanHardware Version 3.0• Kepler K10• GTX670 / 680 / 690Hardware Version 2.0• Tesla M2050/M2070/M2075/M2090 (and C variants)• GTX560 / 570 / 580 / 590• GTX465 / 470 / 480SAN DIEGO SUPERCOMPUTER CENTERC1060/S1070 / GTX280 etc also supported34
Graphics cardQuadro9%Other1%Don't know18%Tesla42%GeForce30%For the research group you belong to, please write in the specific card modelsif you know them.SAN DIEGO SUPERCOMPUTER CENTER35
Page 1 and 2: AMBER and Kepler GPUsJulia Levites,
Page 3 and 4: What is Molecular Dynamics?• In t
Page 5 and 6: Force FieldsSAN DIEGO SUPERCOMPUTER
Page 7 and 8: The AMBER Development TeamA Multi-I
Page 11 and 12: Why do we need Supercomputers?Lots
Page 13 and 14: Moving Molecular DynamicsForward?(a
Page 15 and 16: The Problem(s)• Molecular Dynamic
Page 17 and 18: Requirements• Any implementation
Page 19 and 20: Project Info• AMBER Website: http
Page 21 and 22: Version History• AMBER 10 - Relea
Page 23 and 24: Precision ModelsSPSP - Use single p
Page 25 and 26: Running on GPUs• Details provided
Page 27 and 28: 800.00700.00600.00500.00400.00300.0
Page 29 and 30: Explicit Solvent Benchmark(Cellulos
Page 32: Interactive MD?• Single nodes are
Page 37 and 38: DIY 4 GPU SystemAntec P280 Black AT
Page 39 and 40: Clusters# of CPU sockets 2Cores per
Page 41 and 42: AMBER User Survey - 2011GPU Momentu
Page 43 and 44: GPU Accelerated Apps MomentumKey co

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