The Science of Science (Sci2) Tool and Its Utility for Research ... - VW
The Science of Science (Sci2) Tool and Its Utility for Research ... - VW
The Science of Science (Sci2) Tool and Its Utility for Research ... - VW
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Sci 2 <strong>Tool</strong>: Supported Data FormatsPersonal Bibliographies‣ Bibtex (.bib)‣ Endnote Export Format (.enw)Data Providers‣ Web <strong>of</strong> <strong>Science</strong> by Thomson Scientific/Reuters (.isi)‣ Scopus by Elsevier (.scopus)‣ Google Scholar (access via Publish or Perish save as CSV, Bibtex,EndNote)‣ Awards Search by National <strong>Science</strong> Foundation (.nsf)Scholarly Database (all text files are saved as .csv)‣ Medline publications by National Library <strong>of</strong> Medicine‣ NIH funding awards by the National Institutes <strong>of</strong> Health(NIH)‣ NSF funding awards by the National <strong>Science</strong> Foundation (NSF)‣ U.S. patents by the United States Patent <strong>and</strong> Trademark Office(USPTO)‣ Medline papers – NIH FundingNetwork Formats‣ NWB (.nwb)‣ Pajek (.net)‣ GraphML (.xml or.graphml)‣ XGMML (.xml)Burst Analysis Format‣ Burst (.burst)Other Formats‣ CSV (.csv)‣ Edgelist (.edge)‣ Pajek (.mat)‣ TreeML (.xml)23Sci 2 <strong>Tool</strong>: AlgorithmsSee https://nwb.slis.indiana.edu/communityPreprocessingExtract Top N% RecordsExtract Top N RecordsNormalize TextSlice Table by Line---------------------------------------------Extract Top NodesExtract Nodes Above or Below ValueDelete Isolates---------------------------------------------Extract top EdgesExtract Edges Above or Below ValueRemove Self LoopsTrim by DegreeMST-Pathfinder Network ScalingFast Pathfinder Network Scaling---------------------------------------------Snowball Sampling (in nodes)Node SamplingEdge Sampling---------------------------------------------SymmetrizeDichotomizeMultipartite Joining---------------------------------------------Geocoder---------------------------------------------Extract ZIP CodeModelingR<strong>and</strong>om GraphWatts-StrogatzSmall WorldBarabási-Albert Scale-FreeTARLAnalysisNetwork Analysis <strong>Tool</strong>kit (NAT)Unweighted & UndirectedNode DegreeDegree Distribution---------------------------------------------K-Nearest Neighbor (Java)Watts-Strogatz Clustering CoefficientWatts Strogatz Clustering Coefficient over K---------------------------------------------DiameterAverage Shortest PathShortest Path DistributionNode Betweenness Centrality---------------------------------------------Weak Component ClusteringGlobal Connected Components---------------------------------------------Extract K-CoreAnnotate K-Coreness---------------------------------------------HITSWeighted & UndirectedClustering CoefficientNearest Neighbor DegreeStrength vs DegreeDegree & StrengthAverage Weight vs End-point DegreeStrength DistributionWeight DistributionR<strong>and</strong>omize Weights---------------------------------------------Blondel Community Detection---------------------------------------------HITSUnweighted & DirectedNode IndegreeNode OutdegreeIndegree DistributionOutdegree Distribution---------------------------------------------K-Nearest NeighborSingle Node in-Out Degree Correlations---------------------------------------------Dyad ReciprocityArc ReciprocityAdjacency Transitivity---------------------------------------------Weak Component ClusteringStrong Component Clustering---------------------------------------------24
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