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BOLETIN185-OCTUBRE DE 2004 - Instituto de Ciencias del Mar y ...

BOLETIN185-OCTUBRE DE 2004 - Instituto de Ciencias del Mar y ...

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Contributors: Hartmut Barth, Poul Scheel Larsen, Peter Roepstorff, Ferdinando Boero, John<br />

Dolan, Ulrich Sommer, Valerio Zupo, Jan Vermaat, Thomas R. An<strong>de</strong>rson, Ron T. Kneib,<br />

Bente Aa. Lomstein, Ian Jenkinson, Sandra E. Shumway<br />

MOLECULAR BIOLOGY AND EVOLUTION<br />

Volume 21, Number 9<br />

Edward Susko, Yuji Inagaki, and Andrew J. Roger<br />

On Inconsistency of the Neighbor-Joining, Least Squares, and Minimum Evolution<br />

Estimation When Substitution Processes Are Incorrectly Mo<strong>de</strong>led........................................1629-1642.<br />

Christian Esser, Nahal Ahmadinejad, Christian Wiegand, Carmen Rotte, Fe<strong>de</strong>rico<br />

Sebastiani, Gabriel Gelius-Dietrich, Katrin Henze, Ernst Kretschmann, Erik Richly, Dario<br />

Leister, David Bryant, Michael A. Steel, Peter J. Lockhart, David Penny, and William <strong>Mar</strong>tin<br />

A Genome Phylogeny for Mitochondria Among -Proteobacteria and a Predominantly<br />

Eubacterial Ancestry of Yeast Nuclear Genes........................................................................1643-1660.<br />

Shunyuan Xiao, Brent Emerson, Kumrop Ratanasut, Elaine Patrick, Carmel O'Neill, Ian<br />

Bancroft, and John G. Turner<br />

Origin and Maintenance of a Broad-Spectrum Disease Resistance Locus in Arabidopsis....1661-1672.<br />

Giovanni Destro-Bisol, Francesco Donati, Valentina Coia, Ilaria Boschi, Fabio Verginelli,<br />

Alessandra Caglià, Sergio Tofanelli, Gabriella Spedini, and Cristian Capelli<br />

Variation of Female and Male Lineages in Sub-Saharan Populations: the Importance of<br />

Sociocultural Factors..............................................................................................................1673-1682.<br />

Yousuke Nishio, Yoji Nakamura, Yoshihiro Usuda, Shinichi Sugimoto, Kazuhiko Matsui,<br />

Yutaka Kawarabayasi, Hisashi Kikuchi, Takashi Gojobori, and Kazuho Ikeo<br />

Evolutionary Process of Amino Acid Biosynthesis in Corynebacterium at the Whole Genome<br />

Level........................................................................................................................................1683-1691.<br />

Xinjiang Cai and Jonathan Lytton<br />

The Cation/Ca2+ Exchanger Superfamily: Phylogenetic Analysis and Structural Implications1692-1703.<br />

Alejandro P. Rooney<br />

Mechanisms Un<strong>de</strong>rlying the Evolution and Maintenance of Functionally Heterogeneous 18S<br />

rRNA Genes in Apicomplexans..............................................................................................1704-1711.<br />

Jennifer L. Cooper and Steven Henikoff<br />

Adaptive Evolution of the Histone Fold Domain in Centromeric Histones<br />

MBE Advance Access published on June 2, <strong>2004</strong>.................................................................1712-1718.<br />

Stephen I. Wright, C. B. Kenneth Yau, <strong>Mar</strong>k Looseley, and Blake C. Meyers<br />

Effects of Gene Expression on Molecular Evolution in Arabidopsis thaliana and Arabidopsis<br />

lyrata.......................................................................................................................................1719-1726.<br />

Erin H. Penton and Teresa J. Crease<br />

Evolution of the Transposable Element Pokey in the Ribosomal DNA of Species in the<br />

Subgenus Daphnia (Crustacea: Cladocera)............................................................................1727-1739<br />

Hervé Philippe, Elizabeth A. Snell, Eric Bapteste, Philippe Lopez, Peter W. H. Holland, and<br />

Didier Casane<br />

Phylogenomics of Eukaryotes: Impact of Missing Data on Large Alignments.......................1740-1752.<br />

David O. F. Skibinski and Robert D. Ward<br />

Average Allozyme Heterozygosity in Vertebrates Correlates with Ka/Ks Measured in the<br />

Human-Mouse Lineage...........................................................................................................1753-1759.<br />

Gavin A. Huttley<br />

Mo<strong>de</strong>ling the Impact of DNA Methylation on the Evolution of BRCA1 in Mammals...............1760-1768.<br />

Cédric Feschotte<br />

Merlin, a New Superfamily of DNA Transposons I<strong>de</strong>ntified in Diverse Animal Genomes and<br />

Related to Bacterial IS1016 Insertion Sequences..................................................................1769-1780.<br />

Itay Mayrose, Dan Graur, Nir Ben-Tal, and Tal Pupko<br />

Comparison of Site-Specific Rate-Inference Methods for Protein Sequences: Empirical<br />

Bayesian Methods Are Superior.............................................................................................1781-1791.<br />

M. F. Cardone, L. Ballarati, M. Ventura, M. Rocchi, A. <strong>Mar</strong>ozzi, E. Ginelli, and R. Meneveri<br />

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