MSDaPl - Molecular & Cellular Proteomics

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Ancillary Databases NR_SEQ <strong>MSDaPl</strong> Web Interface MSData Job Queue Projects Data Import FASTA Parser Job Manager FASTA Files Public Data Repositories 24 <strong>Proteomics</strong> Data Files
msRunSearchResult PK id runSearchID scanID charge peptide preResidue postResidue validationStatus SQTSearchResult PK,FK1 resultID sp spRank XCorr XCorrRank deltaCN deltaCNStar evalue calculatedMass matchingIons predictedIons ProLuCIDSearchResult PK,FK1 resultID primaryScore primaryScoreRank secondaryScore secondaryScoreRank deltaCN calculatedMass matchingIons predictedIons BiblioSpecSearchResult PK,FK1 resultID bsSpectrumID bsLibraryID rank dotProductScore weibullPValue MascotSearchResult PK,FK1 resultID rank ionScore identifyingScore homologyScore expect star calculatedMass matchingIons predictedIons XtandemSearchResult PK,FK1 resultID rank hyperScore nextScore bscore yscore expect calculatedMass matchingIons predictedIons id 25
Page 1 and 2: MCP Papers in Press. Published on M
Page 3 and 4: SUMMARY Mass spectrometry-based pro
Page 5 and 6: INTRODUCTION Mass spectrometry-base
Page 7 and 8: long-term archiving, searching, eva
Page 9 and 10: describe that search result. Adding
Page 11 and 12: PROJECTS DATABASE MSDaPl uses a pro
Page 13 and 14: processed by a “job queue manager
Page 15 and 16: Gene Ontology Analysis: To help app
Page 17 and 18: eported results. To accomplish this
Page 19 and 20: REFERENCES 1. Deutsch, E. W. (2010)
Page 21 and 22: FIGURE LEGENDS: Figure 1. Where MSD
Page 23: Sample Preparation Data Acquisition

MSDaPl - Molecular & Cellular Proteomics

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