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Xinfeng Liu (Last updated on April 9, 2012) - Department of ...

Xinfeng Liu (Last updated on April 9, 2012) - Department of ...

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2. Co-PI, South Carolina EPSCoR/IDeA GEAR Grants, 2011-<strong>2012</strong>, $85,000<br />

“Modeling and Simulati<strong>on</strong> <strong>of</strong> Organ Bi<strong>of</strong>abricati<strong>on</strong> Processes”.<br />

3. Co-PI, NSF, <strong>2012</strong>-2015, Submitted<br />

“PESO: An integrated approach <strong>of</strong> mathematical modeling and computati<strong>on</strong>al<br />

studies for proliferati<strong>on</strong> kinetics and phenotypic transiti<strong>on</strong> in cancer cells”.<br />

Affiliati<strong>on</strong>s and<br />

Awards • Society for Industrial and Applied Mathematics<br />

• Society for Mathematical Biology<br />

• Landahl Travel Awards, Society for Mathematical Biology, 2008<br />

• Internati<strong>on</strong>al Travel Awards, Internati<strong>on</strong>al C<strong>on</strong>ference <strong>on</strong> Modeling and Simulati<strong>on</strong>,<br />

Xi’an, China, 2008<br />

• Graduate Council Commendati<strong>on</strong> to Distinguished Doctoral Students, SUNY at<br />

St<strong>on</strong>y Brook, 2006<br />

• SIAM Student Travel Awards, Society for Industrial and Applied Mathematics, 2005<br />

• Sigma Xi Travel Awards, SUNY at St<strong>on</strong>y Brook, 2005<br />

• Peijing Scholarship, Southeast University, China, 1999<br />

Publicati<strong>on</strong>s<br />

Published Papers<br />

1. C. Chan, X. F. <str<strong>on</strong>g>Liu</str<strong>on</strong>g>, L. M. Wang, L. Bardwell, Q. Nie, G. Enciso. Protein<br />

scaffolds can enhance the bistability <strong>of</strong> multisite phosphorylati<strong>on</strong> systems. PLoS<br />

Computati<strong>on</strong>al Biology (Impact factor: 5.759), Accepted under minor revisi<strong>on</strong>.<br />

2. P.-K. Lo, D. Kanojia, X. F. <str<strong>on</strong>g>Liu</str<strong>on</strong>g>, U. P. Singh, F. G. Berger, Qian Wang, H.<br />

X. Chen. CD49f and CD61 identify Her2/neu-induced tumor-initiating cells that<br />

are potentially derived from luminal progenitors and maintained by the integrin-<br />

TGFβ signaling. Oncogene (Impact factor: 7.414), In press, 2011.<br />

3. S. Little, V. Mir<strong>on</strong>ov, R. Markwald, Y. Sugi, S. Lessner, M. Sutt<strong>on</strong>, X. F. <str<strong>on</strong>g>Liu</str<strong>on</strong>g>,<br />

Q. Wang, X. F. Yang, J. Blanchette, M. Skiles, G. Khushf. Engineering a 3D<br />

biological c<strong>on</strong>struct representative research in the South Carolina project for organ<br />

bi<strong>of</strong>abricati<strong>on</strong>. Journal <strong>of</strong> Bi<strong>of</strong>abricati<strong>on</strong> (Impact factor: 1.857), 030202 (3), 2011.<br />

4. S. Zhao, J. Ovadia, X. F. <str<strong>on</strong>g>Liu</str<strong>on</strong>g>, Y.-T. Zhang, Q. Nie. Operator splitting implicit<br />

integrati<strong>on</strong> factor methods for stiff advecti<strong>on</strong>-reacti<strong>on</strong>-diffusi<strong>on</strong> systems. Journal<br />

<strong>of</strong> Computati<strong>on</strong>al Physics (Impact factor: 2.949), 230 (15), pp 5996-6009, 2011.<br />

5. X. F. <str<strong>on</strong>g>Liu</str<strong>on</strong>g>, Q. Nie. Compact implicit integrati<strong>on</strong> factor methods with complex domains<br />

and adaptive mesh refinement. Journal <strong>of</strong> Computati<strong>on</strong>al Physics (Impact<br />

factor: 2.949), 229 (16), pp 5962-5706, 2010.<br />

6. X. F. <str<strong>on</strong>g>Liu</str<strong>on</strong>g>, L. Bardwell, Q. Nie. A combinati<strong>on</strong> <strong>of</strong> multisite phosphorylati<strong>on</strong><br />

and substrate sequestrati<strong>on</strong> produces switch-like resp<strong>on</strong>ses. Biophysical Journal<br />

(Impact factor: 4.39), 98 (8), pp 1396-1407, 2010.<br />

7. X. F. <str<strong>on</strong>g>Liu</str<strong>on</strong>g>, Q. Nie. Spatially-localized scaffold proteins may facilitate to transmit<br />

l<strong>on</strong>g-range signals. Acta Mathematica Scientia, 29 B (6), pp 1657-1669, 2009.<br />

8. Q. Nie, F. Y.M. Wan, Y. T. Zhang, X. F. <str<strong>on</strong>g>Liu</str<strong>on</strong>g>. Compact integrati<strong>on</strong> factor<br />

methods in high spatial dimensi<strong>on</strong>s. Journal <strong>of</strong> Computati<strong>on</strong>al Physics (Impact<br />

factor: 2.949), 277 (10), pp 5238-5255, 2008.<br />

9. W. Bo, H. Jin, D. Kim, X. F. <str<strong>on</strong>g>Liu</str<strong>on</strong>g>, H. Lee, N. Pestieau, Y. Yu, J. Glimm, J.<br />

W. Grove. Comparis<strong>on</strong> and validati<strong>on</strong> <strong>of</strong> multi phase closure models. Computers<br />

and Mathematics with Applicati<strong>on</strong>s (Impact factor: 1.532), 56 (5), pp 1291-1302,<br />

2008.<br />

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