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Inhibitor SourceBook™ Second Edition

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<strong>Inhibitor</strong> SourceBook <br />

<strong>Second</strong> <strong>Edition</strong><br />

Your Ultimate Resource for <strong>Inhibitor</strong>s<br />

Includes inhibitors of<br />

• Phosphorylation/<br />

Dephosphorylation<br />

• Apoptosis/Necrosis<br />

• Cell Division/<br />

Cell Cycle/<br />

Cell Adhesion<br />

• Lipid Signaling<br />

• Neurobiology/<br />

Neurodegeneration<br />

• Nitric Oxide/<br />

Oxidative Stress<br />

• Proteases and more ...


Visit our website and download<br />

the files today!


Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

<strong>Inhibitor</strong> SourceBook <strong>Second</strong> <strong>Edition</strong><br />

Table of Contents<br />

Phosphorylation/Dephosphorylation 3<br />

Akt (Protein Kinase B) <strong>Inhibitor</strong>s . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 3<br />

AMPK <strong>Inhibitor</strong>s . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 5<br />

Calmodulin-Dependent Protein Kinase (CaM Kinase) <strong>Inhibitor</strong>s . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 6<br />

Casein Kinase (CK) <strong>Inhibitor</strong>s . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 9<br />

Checkpoint Kinase <strong>Inhibitor</strong>s . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 11<br />

Cyclin-Dependent Kinase (Cdk) <strong>Inhibitor</strong>s . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 13<br />

DNA-Dependent Protein Kinase (DNA-PK) <strong>Inhibitor</strong>s . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 18<br />

Glycogen Synthase Kinase-3 (GSK-3) <strong>Inhibitor</strong>s . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 19<br />

c-Jun N-Terminal Kinase (JNK/SAP Kinase) <strong>Inhibitor</strong>s . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 22<br />

IP3 Kinase <strong>Inhibitor</strong> . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 23<br />

Mitogen-Activated Protein (MAP) Kinase <strong>Inhibitor</strong>s . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 24<br />

Myosin Light Chain Kinase (MLCK) <strong>Inhibitor</strong>s . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 29<br />

Phosphatidylinositol 3-Kinase (Pl 3-Kinase) <strong>Inhibitor</strong>s . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 31<br />

Protein Kinase A (PKA; cAMP-Dependent Protein Kinase) <strong>Inhibitor</strong>s . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 33<br />

Protein Kinase C (PKC) <strong>Inhibitor</strong>s . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 36<br />

Protein Kinase G (PKG; cGMP-Dependent Protein Kinase) <strong>Inhibitor</strong>s . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 43<br />

Protein Tyrosine Kinase (PTK) <strong>Inhibitor</strong>s . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 45<br />

Raf Kinase <strong>Inhibitor</strong>s . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 55<br />

Rho Kinase (ROCK) <strong>Inhibitor</strong>s . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 56<br />

Sphingosine Kinase <strong>Inhibitor</strong>s . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 57<br />

TGF-b Receptor I Kinase <strong>Inhibitor</strong>s . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 57<br />

Protein Phosphatase <strong>Inhibitor</strong>s . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 58<br />

Apoptosis/Necrosis 63<br />

Caspase <strong>Inhibitor</strong>s . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 63<br />

Granzyme <strong>Inhibitor</strong>s . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 66<br />

Other <strong>Inhibitor</strong>s of Apoptosis . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 67<br />

Necrosis <strong>Inhibitor</strong>s . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 68<br />

Cell Division/Cell Cycle/Cell Adhesion 69<br />

Cell Adhesion <strong>Inhibitor</strong>s . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 69<br />

DNA Methyltransferase <strong>Inhibitor</strong>s . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 71<br />

DNA and RNA Polymerase <strong>Inhibitor</strong>s . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 72<br />

Histone Acetylase and Deacetylase <strong>Inhibitor</strong>s . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 73<br />

Nuclear Import/Export <strong>Inhibitor</strong>s . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 76<br />

Nuclease <strong>Inhibitor</strong>s . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 77<br />

Poly(ADP-ribose) Polymerase (PARP) and Poly(ADP-ribose)<br />

Glycohydrolase (PARG) <strong>Inhibitor</strong>s . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 78<br />

Telomerase <strong>Inhibitor</strong>s . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 80<br />

Topoisomerase <strong>Inhibitor</strong>s . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 82<br />

Lipid Signaling 85<br />

Acetyl-CoA Carboxylase (ACC) <strong>Inhibitor</strong>s . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 85<br />

Cyclooxygenase (COX) <strong>Inhibitor</strong>s . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 85<br />

Fatty Acid Hydrolase <strong>Inhibitor</strong>s . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 88<br />

Fatty Acid Synthase <strong>Inhibitor</strong>s . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 88<br />

HMG-CoA (3-Hydroxy-3-Methylglutaryl Coenzyme A) Reductase <strong>Inhibitor</strong>s . . . . . . . . . . . . . . . . . . . . . . . . 89<br />

Lipase <strong>Inhibitor</strong>s . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 90<br />

Lipoxygenase (LOX) <strong>Inhibitor</strong>s . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 91<br />

Phospholipase <strong>Inhibitor</strong>s . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 93<br />

Sphingomyelinase <strong>Inhibitor</strong>s . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 95<br />

Squalene-2, 3-oxide Cyclase <strong>Inhibitor</strong> . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 95<br />

Technical Support<br />

Phone 800 628 8470<br />

E-mail calbiochem@emdbiosciences.com


<strong>Inhibitor</strong> SourceBook <strong>Second</strong> <strong>Edition</strong><br />

Table of Contents continued<br />

Neurobiology/Neurodegeneration 96<br />

Amyloidogenesis <strong>Inhibitor</strong>s . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 96<br />

Cholinesterase <strong>Inhibitor</strong>s . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 98<br />

Monoamine Oxidase (MAO) <strong>Inhibitor</strong>s . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 98<br />

Secretase <strong>Inhibitor</strong>s . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 99<br />

Nitric Oxide/Oxidative Stress 04<br />

Arginase <strong>Inhibitor</strong>s . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 104<br />

Glutathione S-Transferase (GST) <strong>Inhibitor</strong>s . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 105<br />

Guanylate Cyclase (GC) <strong>Inhibitor</strong>s . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 106<br />

Nitric Oxide Synthase <strong>Inhibitor</strong>s . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 108<br />

Proteases 3<br />

Anthrax Lethal Factor Metalloprotease <strong>Inhibitor</strong>s . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 113<br />

Calpain <strong>Inhibitor</strong>s . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 114<br />

Collagenase <strong>Inhibitor</strong>s (Also see Matrix Metalloproteinase <strong>Inhibitor</strong>s) . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 117<br />

Elastase <strong>Inhibitor</strong>s . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 118<br />

Furin Proteases . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 118<br />

Matrix Metalloproteinase (MMP) <strong>Inhibitor</strong>s . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 119<br />

Tissue <strong>Inhibitor</strong>s of Matrix Metalloproteinases (TIMPs) . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 123<br />

Protease <strong>Inhibitor</strong>s . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 125<br />

Proteasome and Ubiquitination <strong>Inhibitor</strong>s . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 136<br />

Other <strong>Inhibitor</strong>s of Biological Interest 39<br />

Adenylate Cyclase <strong>Inhibitor</strong>s . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 139<br />

Angiotensin-Converting Enzyme (ACE) <strong>Inhibitor</strong>s . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 141<br />

Aromatase <strong>Inhibitor</strong>s . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 141<br />

ATPase <strong>Inhibitor</strong>s . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 141<br />

<strong>Inhibitor</strong>s of Farnesyltransferase (FTase), Geranyltransferase (GGTase), and Methyltransferase . . . . . . . 144<br />

<strong>Inhibitor</strong>s of Glycoprotein Processing and Trafficking . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 147<br />

<strong>Inhibitor</strong>s of Heat Shock Proteins . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 149<br />

<strong>Inhibitor</strong>s of Mitochondrial Function . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 150<br />

NF-kB Activation <strong>Inhibitor</strong>s . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 153<br />

Phosphodiesterase (PDE) <strong>Inhibitor</strong>s . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 157<br />

Plasminogen Activator <strong>Inhibitor</strong>s . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 159<br />

Protein Methtyltransferase <strong>Inhibitor</strong>s . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 160<br />

Protein Synthesis <strong>Inhibitor</strong>s . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 160<br />

Sonic Hedgehog Signaling <strong>Inhibitor</strong>s . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 162<br />

Stem Cell Purification <strong>Inhibitor</strong>s . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 163<br />

Tautomerase <strong>Inhibitor</strong> . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 163<br />

Technical Tips/Frequently Asked Questions 64<br />

Indices 66<br />

Alphabetical . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 166<br />

Numerical . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 172<br />

Trademarks, Patent, and Licensing Information . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 175<br />

Each product is sold with a limited warranty, which is set forth in the Terms of Sale which are provided with each purchase .<br />

Each product is intended to be used for research purposes only . It is not to be used for drug or diagnostic purposes nor is<br />

intended for human use . EMD Biosciences products may not be resold, modified for resale, or used to manufacture commercial<br />

products without written approval of EMD Biosciences .<br />

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Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Phosphorylation/Dephosphorylation<br />

Phosphorylation/Dephosphorylation<br />

Akt (Protein Kinase B) <strong>Inhibitor</strong>s<br />

Akt, also known as protein kinase B (PKB), a serine/<br />

threonine kinase, is a critical enzyme in several signal<br />

transduction pathways involved in cell proliferation,<br />

apoptosis, angiogenesis, and diabetes. Four different<br />

isoforms of Akt (a, b1, b2, and g) have been reported<br />

that differ slightly in the localization of their regulatory<br />

phosphorylation sites. Activation of Akt involves<br />

growth factor binding to a receptor tyrosine kinase<br />

and activation of PI 3-K, which phosphorylates the<br />

membrane bound PI (4,5)P 2 (PIP 2 ) to generate PI(3,4,5)P 3<br />

(PIP 3 ). Binding of PIP 3 to Akt anchors it to the plasma<br />

membrane and exposes it to phosphorylation and<br />

activation by 3-phosphoinositide-dependent kinase-1<br />

(PDK1). Akt is activated following its phosphorylation<br />

at two regulatory residues, a threonine residue<br />

on the kinase domain and a serine residue on the<br />

hydrophobic motif, which are structurally and<br />

functionally conserved within the AGC kinase family.<br />

Phosphorylation of threonine on the kinase domain,<br />

catalyzed by PDK1, is essential for Akt activation.<br />

Akt activity is augmented approximately 10-fold by<br />

phosphorylation at the serine on the hydrophobic motif<br />

by PDK2. Phosphorylation of Thr 308 and Ser 473 activates<br />

Akt a. Phosphorylation at Thr 309 and Ser 474 on Akt b1<br />

and b2, and on Thr 305 on Akt g result in their activation.<br />

The activation of Akt is negatively regulated by PTEN,<br />

a PIP 3 specific phosphatase, and SHIP, an SH2-domain<br />

containing inositol 5-phosphatase.<br />

The principal role of Akt in the cell is to facilitate<br />

growth factor-mediated cell survival and to block<br />

apoptotic cell death. This is achieved by phosphorylating<br />

and deactivating pro-apoptotic factors such as BAD,<br />

Caspase-9, and Forkhead transcription factors (FKHR).<br />

The phosphorylation of BAD allows it to bind to<br />

14-3-3 protein thereby preventing localization of BAD<br />

at the mitochondria to induce apoptosis. Additionally,<br />

phosphorylation of FKHR by Akt prevents it from<br />

inducing expression of Fas ligand; hence it promotes<br />

cell survival. Akt also phosphorylates and activates<br />

IKKa, which leads to NF-kB activation and cell survival.<br />

Akt is also known to stimulate glycogen synthesis by<br />

phosphorylating and inactivating GSK-3 leading to the<br />

activation of glycogen synthase. The inactivation of<br />

GSK-3 also induces the up-regulation of cyclin D, which<br />

enhances cell cycle progression. Akt is reported to play<br />

a critical role in tumorigenesis, becoming activated<br />

when tumor suppressors such as p27 Kip1 and PTEN lose<br />

their functions. Phosphorylation of p27 at Thr 157 by Akt<br />

impairs its nuclear import and leads to its cytoplasmic<br />

accumulation. Cytoplasmic mislocalization of p27<br />

has been strongly linked to loss of differentiation and<br />

poor outcome in breast cancer patients. Akt can also<br />

physically associate with endogenous p21, a cell cycle<br />

inhibitor, and phosphorylate it at Thr 145 , causing its<br />

localization to the cytoplasm, ultimately resulting in<br />

deregulation of cell proliferation.<br />

References:<br />

Feng, J. et al. 2004. J. Biol. Chem. 279, 4 89.<br />

Cantley, L.C. 2002. Science 296, 655.<br />

Graff, J.R. 2002. Expert Opin. Ther. Targets 6, 04.<br />

Liang, J., et al. 2002. Nat. Med. 8, 53.<br />

Mitsiades, C.S., et al. 2002. Oncogene 21, 5673.<br />

Shiojima, I., and Walsh, K. 2002. Circ. Res. 90, 243.<br />

Yang, J., et al. 2002. Nat. Struct. Biol. 9, 940.<br />

Zhou, B.P., and Hung, M.C. 2002. Semin. Oncol. 29, 62.<br />

El-Deiry, W.S. 200 . Nat. Cell Biol. 3, E7 .<br />

Martin, D., et al. 200 . J. Neurochem. 78, 000.<br />

Sabbatini P., and McCormick, F. 999. J. Biol. Chem. 274, 24263.<br />

More online... www.calbiochem.com/inhibitors/Akt<br />

Technical Support<br />

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3


Phosphorylation/Dephosphorylation<br />

Akt (Protein Kinase B) <strong>Inhibitor</strong>s<br />

Product Cat. No. Comments Size Price<br />

Akt <strong>Inhibitor</strong> 124005 [1L-6-Hydroxymethyl-chiro-inositol 2-(R)-2-O-methyl-3-O-octadecylcarbonate]<br />

A phosphatidylinositol ether analog that potently and selectively inhibits Akt<br />

(IC 50 = 5.0 mM). A weak inhibitor of phosphatidylinositol 3-kinase (IC 50 = 83 mM).<br />

Akt <strong>Inhibitor</strong> II 124008 (SH-5)<br />

A phosphatidylinositol analog that inhibits the activation of Akt and selected downstream<br />

substrates without affecting the phosphorylation of PDK- and other downstream kinases.<br />

Decreases phosphorylation of Akt without affecting the total Akt level.<br />

Akt <strong>Inhibitor</strong> III 124009 (SH-6)<br />

A phosphatidylinositol analog that inhibits the activation of Akt and selected downstream<br />

substrates without affecting the phosphorylation of PDK- and other downstream kinases.<br />

Decreases phosphorylation of Akt without affecting the total Akt level.<br />

mg $ 3<br />

mg $247<br />

mg $247<br />

Akt <strong>Inhibitor</strong> IV 124011 A cell-permeable inhibitor of Akt phosphorylation/activation that targets ATP-binding mg $95<br />

site of a kinase upstream of Akt, but downstream of PI 3-kinase.<br />

5 mg $335<br />

N InSolution Akt<br />

<strong>Inhibitor</strong> IV<br />

124015 A 0 mM ( mg/ 63 ml) solution of Akt <strong>Inhibitor</strong> IV (Cat. No. 240 ) in DMSO. mg $95<br />

N Akt <strong>Inhibitor</strong> V,<br />

Triciribine<br />

Technical Tips for use of Akt inhibitors<br />

Our Akt inhibitors are classified into four groups based on their modes of action.<br />

The first three groups of inhibitors interfere with the cellular activation of Akt and do not affect already activated Akt. These inhibitors should only be used on<br />

cells (with the exception of Cat. No. 240 3, which is not cell-permeable) or in coupled kinase assays, involving non-activated Akt. The fourth group of inhibitors<br />

is suitable for use in cell cultures, as well as in cell-free kinase assays, involving either activated or non-activated Akts.<br />

Group I:<br />

Phosphatidylinositol analogs<br />

(Cat. Nos. 124005/124008/<br />

124009)<br />

These inhibitors compete with PIP 2<br />

thereby preventing the generation<br />

of PIP 3 . They also compete with PIP 3<br />

binding to Akt. The phosphonate<br />

analogs ( 24008/ 24009) display<br />

improved metabolic stability over<br />

the carbonate analog ( 24005).<br />

124012 (Akt/PKB Signaling <strong>Inhibitor</strong>-2; API-2; NSC 154020; TCN)<br />

Inhibits the cellular phosphorylation/activation of Akt /2/3 by targeting an Akt effector<br />

molecule other than PI 3-K or PDK . Has shown efficacy in vivo.<br />

N Akt <strong>Inhibitor</strong> VI, Akt-in 124013 (H-AVTDHPDRLWAWEKF-OH; TCL1 10-24 )<br />

A 5-mer peptide that acts as a specific inhibitor of Akt. Shown to bind to Akt-PH<br />

domain (K d ~ 8 mM) and interfere with the Akt-phosphoinositide interaction.<br />

N Akt <strong>Inhibitor</strong> VII,<br />

TAT-Akt-in<br />

N Akt <strong>Inhibitor</strong> VIII,<br />

Isozyme-Selective,<br />

Akti- /2<br />

N InSolution Akt<br />

<strong>Inhibitor</strong> VIII, Isozyme-<br />

Selective, Akti- /2<br />

N Akt <strong>Inhibitor</strong> IX, API-<br />

59CJ-OMe<br />

Group II:<br />

(Cat. Nos.124011/124012/<br />

124015/124019/124020/<br />

252740/476880)<br />

These inhibitors target yet to be<br />

identified signaling molecules,<br />

other than PDK and PI 3-kinase.<br />

Group III:<br />

(Cat. Nos. 124013/124014)<br />

These inibitors contain a TCL -<br />

derived peptide inhibitor sequence,<br />

which binds to the PH domain of<br />

Akt and interferes with the Aktphosphoinositide<br />

interaction.<br />

124014 (H-YGRKKRRQRRR-AVTDHPDRLWAWEKF-OH; TAT-TCL1 10-24 )<br />

A cell-permeable version of the Akt <strong>Inhibitor</strong> VI, Akt-in (Cat. No. 240 3) that directly<br />

binds the Akt PH domain, preventing PI binding. Has shown efficacy in vivo.<br />

124018 {Akti-1/2; 1,3-Dihydro-1-(1-((4-(6-phenyl-1H-imidazo[4,5-g]quinoxalin-7-yl)<br />

phenyl)methyl)-4-piperidinyl)-2H-benzimidazol-2-one}<br />

A cell-permeable, potent and selective inhibitor of Akt /Akt2 kinase activity<br />

(IC = 58 nM, 2 0 nM, and 2. 2 mM for Akt , Akt2, and Akt3, respectively. Inhibition is<br />

50<br />

PH (pleckstrin homology) domain-dependent.<br />

124017 A 0 mM ( mg/ 8 ml) solution of Akt <strong>Inhibitor</strong> VIII, Isozyme-Selective, Akti- /2<br />

(Cat. No. 240 8) in DMSO.<br />

124019 A cell-permeable ellipticine compound that potently and selectively inhibits cell growth<br />

and induces apoptosis in human endometrial cancer cells with elevated Akt levels.<br />

Exhibits minimal effect on cells lacking Akt activity.<br />

Group IV:<br />

(Cat. Nos. 124017/124018)<br />

This inhibition is pleckstrin homology<br />

(PH) domain-dependent. Inhibition<br />

is not seen in Akts lacking the PH<br />

domain or closely related AGC<br />

family kinases. This inhibitor has<br />

the distinct advantage of directly<br />

binding to either non-activated or<br />

activated Akt, thereby inhibiting<br />

both the activation of Akt and the<br />

kinase activity of Akt.<br />

mg $ 47<br />

2 mg $ 42<br />

2 mg $258<br />

mg $ 34<br />

mg $ 34<br />

5 mg $ 85<br />

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Akt (Protein Kinase B) <strong>Inhibitor</strong>s, continued<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Phosphorylation/Dephosphorylation<br />

Product Cat. No. Comments Size Price<br />

Akt <strong>Inhibitor</strong> X 124020 A cell-permeable inhibitor of Akt phosphorylation and its in vitro kinase activity<br />

(complete inhibition < 5 mM) with minimal effect on PI 3-K, PDK , and SGK . Unlike<br />

Akti /2 (Cat. No. 240 8), the mode of inhibition is not PH domain-dependent.<br />

N (-)-Deguelin,<br />

Mundulea sericea<br />

N Naltrindole,<br />

Hydrochloride<br />

AMPK <strong>Inhibitor</strong>s<br />

252740 A cell-permeable rotenoid compound that displays antitumor properties. Selectively<br />

blocks Akt activation with minimal effects on MAPK signaling. Also shown to activate<br />

AMPK activity.<br />

476880 (NTI)<br />

A cell-permeable inhibitor of cellular Akt signaling. Decreases phosphorylation levels of<br />

PDK , Akt, FKHR/AFX, GSK-3b, and inhibits Akt-dependent cell growth in small cell lung<br />

cancer (SCLC) cell lines (IC 50 = 25, 40, and 55 mM in NCI-H69, NCI-H345, and NCI-H5 0,<br />

respectively).<br />

5 mg $20<br />

5 mg $67<br />

5 mg $84<br />

To view all Akt research-related<br />

products and to request your free<br />

Akt pathway wall poster, visit our<br />

Akt Interactive Pathways at<br />

www.calbiochem.com/akt<br />

Product Cat. No. Comments Size Price<br />

AMPK <strong>Inhibitor</strong>,<br />

Compound C<br />

InSolution AMPK<br />

<strong>Inhibitor</strong>, Compound C<br />

Plus PI 3-kinase<br />

Signaling<br />

171260 A cell-permeable pyrrazolopyrimidine compound that acts as a potent, selective,<br />

reversible, and ATP-competitive inhibitor of AMPK (AMP-activated protein kinase; K i<br />

= 09 nM in the presence of 5m M ATP and the absence of AMP). Does not affect the<br />

activities of ZAPK, Syk, PKCθ, PKA, or JAK3. Blocks cellular activities induced by AICAr<br />

(Cat. No. 23040) or Metformin. Induces weight loss by attenuating AMPK-mediated food<br />

intake in mice.<br />

171261 A 0 mM ( mg/250 ml) solution of AMPK inhibitor, compound C (Cat. No. 7 260) in<br />

DMSO.<br />

mg<br />

5 mg<br />

$72<br />

$242<br />

mg $72<br />

STO-609 570250 Significantly inhibits AMPK activation in HeLa cells (IC 50 = 0.2 mg/ml). 5 mg $ 73<br />

Technical Support<br />

Phone 800 628 8470<br />

E-mail calbiochem@emdbiosciences.com<br />

5


Phosphorylation/Dephosphorylation<br />

Calmodulin-Dependent Protein Kinase (CaM Kinase) <strong>Inhibitor</strong>s<br />

Many effects of Ca 2+ are mediated by Ca 2+ /<br />

calmodulin(CaM)-dependent protein kinases<br />

(CaM kinases). CaM kinases constitute a family of<br />

structurally related enzymes that include phosphorylase<br />

kinase, myosin light chain kinase, and CaM kinases I-IV.<br />

CaM kinase II, one of the best-studied multifunctional<br />

enzymes, is found in high concentrations in neuronal<br />

synapses, and in some regions of the brain it may<br />

constitute up to 2% of the total protein content.<br />

Activation of CaM kinase II has been linked to memory<br />

and learning processes in the vertebrate nervous system.<br />

CaM kinase II is a complex of about 12 subunits that<br />

exist in four differentially expressed forms (a, b, g,<br />

and d). In the inactive state there is a strong interaction<br />

between the inhibitory and catalytic domains of the<br />

enzyme. The binding of Ca 2+ /CaM allows the catalytic<br />

domain to phosphorylate the inhibitory domain. Once<br />

activated, CaM kinase II retains significant activity<br />

even after the withdrawal of Ca 2+ , thereby prolonging<br />

the duration of kinase activity. Several synthetic and<br />

naturally occurring compounds have been shown<br />

to bind CaM in a Ca 2+ -dependent manner and block<br />

the activation of CaM-dependent enzymes. These<br />

compounds have been extensively used in investigating<br />

the mechanism of Ca 2+ -binding and activation in<br />

biological systems.<br />

References:<br />

Fujisawa, H. 2000. J. Biochem. (Tokyo) 129, 93.<br />

Rokolya, A., and Singer, H.A. 2000. Am. J. Physiol. 278, C537.<br />

Fukunaga, K., and Miyamoto, E. 999. Jap. J. Pharmacol. 79, 7.<br />

Kemp, B.E., et al. 994. In Protein Kinases (Woodgett, J.R., ed.),<br />

Oxford Univ. Press, N.Y. pp 30-67.<br />

ADP ATP<br />

More online... www.calbiochem.com/inhibitors/CAMK<br />

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Calmodulin-Dependent Protein Kinase (CaM Kinase) <strong>Inhibitor</strong>s<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Phosphorylation/Dephosphorylation<br />

Product Cat. No. Comments Size Price<br />

Autocamtide-2 Related<br />

<strong>Inhibitor</strong>y Peptide<br />

Autocamtide-2 Related<br />

<strong>Inhibitor</strong>y Peptide II<br />

Autocamtide-2 Related<br />

<strong>Inhibitor</strong>y Peptide II,<br />

Cell-permeable<br />

Autocamtide-2 Related<br />

<strong>Inhibitor</strong>y Peptide,<br />

Myristoylated<br />

Calmodulin Binding<br />

Domain<br />

Ca 2+ /Calmodulin Kinase<br />

II <strong>Inhibitor</strong> 28 -309<br />

[Ala 286 ]-Ca 2+ /<br />

Calmodulin Kinase II<br />

<strong>Inhibitor</strong> 28 -30<br />

Calmodulin Kinase<br />

IINtide<br />

Calmodulin Kinase<br />

IINtide, Myristoylated<br />

189480 [(Ala 9 )-Autocamtide-2; AIP; KKALRRQEAVDAL]<br />

Non-phosphorylatable analog of Autocamtide-2 (Cat. No. 89475) that is a highly<br />

specific and potent inhibitor of CaM kinase II (IC 50 = 40 nM).<br />

189484 (A3K/V10F-AIP; AIP-II; KKKLRRQEAFDAL)<br />

An AIP-related peptide where Ala 3 and Val 0 are replaced with Lys and Phe. Highly<br />

specific and potent inhibitor of CaM kinase II (IC 50 = 4. nM).<br />

189485 (Ac-RQIKIWFQNRRMKWKKKKKLRRQEAFDAL-OH; Ant-A3K/V10F-AIP; Ant-AIP-II)<br />

A highly specific, potent, cell-permeable inhibitor of CaM kinase II. Contains the<br />

Antennapedia transport peptide sequence fused to the N-terminus of AIP-II<br />

(Cat. No. 89484).<br />

189482 (Myr-N-KKALRRQGAVDAL-OH; Myristoylated AIP)<br />

This peptide corresponds to AIP (Cat. No. 89480) which has been myristoylated at the<br />

N-terminus, enhancing its cell-permeability.<br />

208734 (Calmodulin antagonist; CaM kinase II 290-309)<br />

A potent calmodulin antagonist that inhibits the activation of CaM kinase II<br />

(IC 50 = 52 nM).<br />

208711 (CaM Kinase II <strong>Inhibitor</strong> 281-309; MHRQETVDCLKKFNARRKLKGAILTTMLA-OH)<br />

A synthetic peptide containing the CaM-binding domain (290-309) and the autophosphorylation<br />

site (Thr 286 ) of CaM kinase II. Inhibits CaM kinase II by blocking Ca 2+ /<br />

calmodulin activation (IC 50 = 80 nM) and enzyme-active site (IC 50 = 2 mM).<br />

208710 (CaM Kinase II <strong>Inhibitor</strong> 281-301; MHRQEAVDCLKKFNARRKLKG-NH 2 )<br />

A synthetic peptide corresponding to residues 28 -30 of the a subunit of CaM kinase<br />

II that acts as a potent inhibitor (IC 50 = 2 mM) of CaM kinase II catalytic fragment.<br />

Inhibition is competitive with respect to ATP and in a non-competitive manner with<br />

respect to peptide substrate.<br />

208920 (KRPPKLGQIGRAKRVVIEDDRIDDVLK-OH)<br />

A potent and specific inhibitor of CaM kinase II (IC 50 = 50 nM). Does not affect the<br />

activity of CaM kinase I, IV, CaM KK, PKA, or PKC.<br />

208921 (Myr-N-GGGKRPPKLGQIGRAKRVVIEDDRIDDVLK-OH)<br />

The myristoylated, cell–permeable form of CaM Kinase IINtide (Cat. No. 208920).<br />

H-89, Dihydrochloride 371963 {N-[2-((p-Bromocinnamyl)amino)ethyl]-5-isoquinolinesulfonamide, 2HCl}<br />

A cell-permeable, selective and potent inhibitor of protein kinase A (K i = 48 nM). Inhibits<br />

other kinases at higher concentrations: MLCK (K i = 28.3 mM), CaM kinase II (K i = 29.7 mM),<br />

PKC (K i = 3 .7 mM), casein kinase I (K i = 38.3 mM), and Rho Kinase II (IC 50 = 270 nM).<br />

Not available for sale in Japan.<br />

HA 004,<br />

Dihydrochloride<br />

K-252a, Nocardiopsis<br />

sp.<br />

InSolution K-252a,<br />

Nocardiopsis sp.<br />

371964 [N-(2-Guanidinoethyl)-5-isoquinolinesulfonamide, 2HCl]<br />

An inhibitor of CaM kinase II (K i = 3 mM), MLCK (K i = 50 mM), PKA (K i = 2.3 mM),<br />

PKC (K i = 40 mM), and PKG (K i = .3 mM). Not available for sale in Japan.<br />

420298 A cell-permeable inhibitor of CaM kinase II (K i = .8 nM), MLCK (K i = 7 nM), protein<br />

kinase A (K i = 8 nM), protein kinase C (K i = 25 nM), and protein kinase G (K i = 20 nM).<br />

500 mg $ 9<br />

mg $ 06<br />

mg $2 7<br />

500 mg $ 5<br />

mg $ 07<br />

500 mg $ 6<br />

500 mg $208<br />

mg $ 07<br />

mg $ 7<br />

mg $84<br />

mg $57<br />

00 mg $ 33<br />

420297 A mM ( 00 mg/2 4 ml) solution of K-252a (Cat. No. 420298) in anhydrous DMSO. 00 mg $ 28<br />

KN-62 422706 {1-[N,O-bis-(5-Isoquinolinesulfonyl)-N-methyl-L-tyrosyl]-4-phenylpiperazine}<br />

A cell-permeable, selective inhibitor of CaM kinase II (K i = 900 nM) that binds directly<br />

to the CaM-binding site of the enzyme. Not available for sale in Japan.<br />

KN-92 422709 {2-[N-(4-Methoxybenzenesulfonyl)]amino-N-(4-chlorocinnamyl)-N-methylbenzylamine,<br />

Phosphate}<br />

Useful as a negative control for KN-93 (Cat. No. 422708), a CaM kinase II inhibitor.<br />

KN-93 422708 {2-[N-(2-hydroxyethyl)]-N-(4-methoxybenzenesulfonyl)]amino-N-(4-chlorocinnamyl)-<br />

N-methylbenzylamine)}<br />

A cell-permeable, competitive inhibitor of rat brain CaM kinase II (K i = 370 nM).<br />

Selectively binds to the CaM-binding site of the enzyme and prevents the association of<br />

CaM with CaM kinase II.<br />

mg $ 03<br />

mg $ 03<br />

KN-93, Water-Soluble 422711 A water-soluble form of the CaM kinase II inhibitor KN-93 (Cat. No. 422708). mg $ 03<br />

InSolution KN-93 422712 A 5 mM ( mg/399 ml) solution of KN-93 <strong>Inhibitor</strong> (Cat. No. 422708) in DMSO. mg $ 09<br />

mg<br />

5 mg<br />

$ 03<br />

$36<br />

Technical Support<br />

Phone 800 628 8470<br />

E-mail calbiochem@emdbiosciences.com<br />

7


Phosphorylation/Dephosphorylation<br />

Calmodulin-Dependent Protein Kinase (CaM Kinase) <strong>Inhibitor</strong>s, continued<br />

Product Cat. No. Comments Size Price<br />

Lavendustin C 234450 [Compound 5; 5-(N-2´,5´-Dihydroxybenzyl)aminosalicylic Acid]<br />

Potent inhibitor of CaM kinase II (IC 50 = 200 nM) and pp60 c-src (IC 50 = 200 nM).<br />

N PP Analog II,<br />

NM-PP<br />

529581 A cell-permeable PP analog (Cat. No. 529579) that acts as a potent and selective ATPcompetitive<br />

inhibitor of a variety of mutant kinases over wild-type (IC 50 = 3.2 nM for<br />

T339G, c-Fyn-as vs. .0 mM for c-Fyn; 4.3 nM for I338G, v-src-as vs. 28 mM for v-src;<br />

5 nM for F80G, CDK2-as vs. 29 mM for CDK2; 8 nM for F89G, CAMK IIa-as vs.<br />

24 mM for CAMKII; 20 nM for T3 5A, c-Abl-as2 vs. 3.4 mM for c-Abl). Shown to<br />

activate mutants of Ire , a transmembrane kinase.<br />

STO-609 570250 A cell-permeable, highly selective, potent, ATP-competitive inhibitor of CaM kinase kinase<br />

(CaM-KK) (IC 50 = 320 nM and 06 nM for CaM-KKa and CaM-KKb isoforms, respectively).<br />

Binds to the catalytic domain of CaM-KK, and inhibits autophosphorylation.<br />

TX-1918<br />

A cell-permeable, potent inhibitor for eEF2 kinase (IC 50 = 440 nM).<br />

Inhibits other kinases at much higher concentrations (IC 50 = 4.4, 44, 44,<br />

and 440 mM for Src, PKA, PKC, and EGFR kinase, respectively).<br />

Cat. No. 655203 10 mg $90<br />

Including Oncogene<br />

Research Products<br />

mg $62<br />

mg $82<br />

5 mg $ 73<br />

Featuring 50<br />

NEW products<br />

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Casein Kinase (CK) <strong>Inhibitor</strong>s<br />

Casein kinases I and II (CKI and CKII) are highly<br />

conserved, ubiquitous serine/threonine protein kinases<br />

that play a significant role in neoplasia and cell survival.<br />

CKI can be found in the nucleus and the cytosol and<br />

is bound to the cytoskeleton and membranes. The CKI<br />

family consists of several isoforms (CKIa, b, g1, g2,<br />

g3, d, and e) encoded by seven distinct genes. It plays a<br />

significant role in the regulation of circadian rhythm,<br />

intracellular trafficking and also acts as a regulator of<br />

Wnt signaling, nuclear import, and the progression of<br />

Casein Kinase (CK) <strong>Inhibitor</strong>s<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Phosphorylation/Dephosphorylation<br />

Alzheimer’s disease. CKII has traditionally been classified<br />

as a messenger-independent protein serine/threonine<br />

kinase and consists of two catalytic and two regulatory<br />

subunits. It plays an important role in the progression<br />

of the cell cycle and in maintenance of cell viability.<br />

It is highly conserved and is known to phosphorylate<br />

about 300 different proteins. CKII activity is required at<br />

transition points of the cell cycle. Excessive activity of<br />

CKII has been linked to oncogenic transformation and the<br />

development of primary and metastatic tumors.<br />

Product Cat. No. Comments Size Price<br />

A3, Hydrochloride 100122 [N-(2-Aminoethyl)-5-chloronaphthalene-1-sulfonamide, HCl]<br />

A shorter alkyl chain derivative of W-7 (Cat. No. 68 629) that inhibits CKI (K i = 80 mM), CKII<br />

(K i = 5. mM), MLCK (K i = 7.4 mM), PKA (K i = 4.3 mM), PKC (K i = 47 mM), and PKG (K i = 3.8 mM).<br />

N Casein Kinase I<br />

<strong>Inhibitor</strong>, D4476<br />

N InSolution Casein<br />

Kinase I <strong>Inhibitor</strong>, D4476<br />

Casein Kinase II<br />

<strong>Inhibitor</strong> I<br />

N InSolution Casein<br />

Kinase II <strong>Inhibitor</strong> I<br />

N Casein Kinase II<br />

<strong>Inhibitor</strong> II, DMAT<br />

N InSolution Casein<br />

Kinase II <strong>Inhibitor</strong>,<br />

DMAT<br />

218696 {CKI <strong>Inhibitor</strong>; 4-(4-(2,3-Dihydrobenzo[1,4]dioxin-6-yl)-5-pyridin-2-yl-1H-imidazol-<br />

2-yl)benzamide}<br />

A cell-permeable, potent, and relatively specific ATP-competitive inhibitor of CKI<br />

(IC 50 = 200 nM from S. pombe; 300 nM for CKId). Shown to be ~ 0-fold more potent<br />

than IC26 (Cat. No. 400090; IC 50 = 2.5 mM for CKI).<br />

218705 A 0 mM ( mg/25 ml) solution of Casein Kinase I <strong>Inhibitor</strong>, D4476<br />

(Cat. No. 2 8696) in DMSO.<br />

218697 (CKII <strong>Inhibitor</strong>; TBB; TBBt; 4,5,6,7-Tetrabromo-2-azabenzimidazole; 4,5,6,7-<br />

Tetrabromobenzotriazole)<br />

A cell-permeable, highly selective, ATP/GTP-competitive CKII inhibitor<br />

(IC 50 = 900 nM and .6 mM for rat liver and human recombinant CKII, respectively<br />

and DYRK (IC 50 < mM for DYRK a).<br />

218708 A 0 mM (5 mg/ . 5 ml) solution of Casein Kinase II <strong>Inhibitor</strong> I<br />

(Cat. No. 2 8697) in DMSO.<br />

218699 (CKII <strong>Inhibitor</strong> II, DMAT; 2-Dimethylamino-4,5,6,7-tetrabromo-1H-benzimidazole)<br />

A cell-permeable, potent, high affinity and ATP-competitive inhibitor of CKII (IC 50 = 40 nM<br />

rat liver; K i = 40 nM). Displays ~ 300 fold greater selectivity over CKI (IC 50 > 200 mM) and is<br />

superior to CKII inhibitor, TBB (Cat. No. 2 8697).<br />

218706 A 0 mM (5 mg/ .05 ml) solution of Casein Kinase II <strong>Inhibitor</strong>, DMAT<br />

(Cat. No. 2 8699), in DMSO.<br />

Daidzein 251600 (4´,7-Dihydroxyisoflavone)<br />

Inactive analog of Genistein that is reported to inhibit casein kinase II activity.<br />

5,6-Dichloro- -b-Dribofuranosylbenz–<br />

imidazole<br />

287891 (5,6-Dichlorobenzimidazole Riboside; DRB)<br />

Potent and specific inhibitor of casein kinase II (IC 50 = 6 mM).<br />

Ellagic Acid, Dihydrate 324683 4,4′,5,5′,6,6′-Hexahydroxydiphenic Acid 2,6,2′,6′-Dilactone<br />

A cell-permeable, potent, selective and ATP-competitive inhibitor of CKII (IC 50 = 40 nM).<br />

H-89, Dihydrochloride 371963 {N-[2-((p-Bromocinnamyl)amino)ethyl]-5-isoquinolinesulfonamide, 2HCl}<br />

A cell-permeable, selective and potent inhibitor of PKA (K i = 48 nM). At higher<br />

concentrations it also inhibits MLCK (K i = 28.3 mM), CaM kinase II (K i = 29.7 mM),<br />

PKC (K i = 3 .7 mM), CKI (K i = 38.3 mM), and Rho kinase II (IC 50 = 270 nM).<br />

Not available for sale in Japan.<br />

InSolution H-89,<br />

Dihydrochloride<br />

More online... www.calbiochem.com/inhibitors/CK<br />

371962 N-[2-((p-Bromocinnamyl)amino)ethyl]-5-isoquinolinesulfonamide, 2HCl<br />

A 0 mM ( mg/ 93 µl) solution of H-89, Dihydrochloride (Cat. No. 37 963) in DMSO.<br />

Not available for sale in Japan.<br />

Key: CKI: Casein kinase I; CKII: Casein kinase II; MLCK: Myosin light chain kinase; PKA: Protein kinase A; PKC: Protein kinase C<br />

0 mg $90<br />

mg $ 2<br />

mg $ 2<br />

0 mg $73<br />

5 mg $53<br />

5 mg $90<br />

5 mg $90<br />

25 mg $47<br />

50 mg $90<br />

500 mg $57<br />

mg $84<br />

mg $84<br />

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9


Phosphorylation/Dephosphorylation<br />

Casein Kinase (CK) <strong>Inhibitor</strong>s, continued<br />

Product Cat. No. Comments Size Price<br />

Hypericin 400076 A potent inhibitor of CKII (IC 50 = 6 nM). Also inhibits PKC (IC 50 = 3.3 mM), MAP kinase<br />

(IC 50 = 4 nM), and the protein tyrosine kinase activity of the insulin receptor<br />

(IC 50 = 20–29 nM) and the EGF receptor (IC 50 = 35 nM).<br />

IC26 400090 {3-[(2,4,6-Trimethoxyphenyl)methylidenyl]-indolin-2-one}<br />

A potent and selective inhibitor of CKId (IC 50 = 0.7 - .3 mM) and CKIe<br />

(IC 50 = 0.6– .4 mM). Also inhibits CKIa at much higher concentrations<br />

(IC 50 = –2 mM). The inhibition is competitive with respect to ATP.<br />

<br />

<br />

<br />

Includes<br />

Non-detergent<br />

Sulfobetaines<br />

iFOLD<br />

Protein Refolding System<br />

Inclusion body preparation and a 96-well matrix of buffers<br />

and additives for convenient optimization of refolding conditions<br />

Request your FREE copy today!<br />

Now Available Refold<br />

recombinant<br />

proteins<br />

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5 mg $ 2<br />

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Checkpoint Kinase <strong>Inhibitor</strong>s<br />

Eukaryotes have evolved elaborate sensory networks to<br />

detect and repair DNA damage and prevent alterations<br />

in their genetic material. In response to DNA damage,<br />

eukaryotic cells arrest either in G1 or S phase, to prevent<br />

replication of damaged genes, or in G2 phase to avoid<br />

segregation of defective chromosomes. Checkpoint<br />

kinases, Chk1 and Chk2, participate in various DNAdamage<br />

responses, including cell-cycle checkpoints,<br />

genome maintenance, DNA repair, and apoptosis. They<br />

phosphorylate several key proteins involved in cell cycle<br />

and block their activity.<br />

Chk1, an evolutionarily conserved protein kinase,<br />

is expressed in the S and G2 phases of cell cycle of<br />

proliferating cells. It is activated by phosphorylation<br />

of Ser 317 and Ser 345 in response to DNA damage. Once<br />

activated, Chk1 phosphorylates Ser 123 of Cdc25A,<br />

which targets it for ubiquitin-mediated degradation.<br />

The phosphorylated Cdc25A cannot dephosphorylate<br />

and activate Cdk1 and Cdk2, resulting in an arrest<br />

of cell cycle in the G1, S, and G2 phases. Chk1<br />

also phosphorylates Ser 216 on Cdc25C and prevents<br />

its activation in the G2 phase. Phosphorylated<br />

Cdc25C cannot dephosphorylate and activate Cdk1.<br />

Recent research indicates that Chk1 is an ideal<br />

chemosensitization target and its inhibition can sensitize<br />

tumors, particularly those with p53-deficiency, to<br />

various chemotherapeutic agents.<br />

Chk2 is structurally different from Chk1, but they share<br />

overlapping substrate specificities. Chk2 is activated<br />

following exposure to infrared light or topotecan,<br />

whereas Chk1 is activated by agents that interfere<br />

with DNA replication. This observation has lead to the<br />

belief that Chk1 blocks cell-cycle progression when<br />

replication is inhibited, whereas Chk2 acts when there<br />

are double-strand breaks. Chk2 is activated by DNAstrand-breaking<br />

agents such as ionizing radiation<br />

and topoisomerase inhibitors through the ATMdependent<br />

pathway. The role of Chk2 in checkpoints<br />

is not clearly understood. However, it is reported to<br />

phosphorylate Cdc25A and inhibit its activity. Chk2 also<br />

phosphorylates Ser 20 at the amino-terminal activation<br />

domain of p53 and regulates levels of p53 in response to<br />

DNA double strand breaks. However, phosphorylation<br />

of Ser 20 is not the only important event for p53 response<br />

induced by UV light. Chk2 can also regulate p53 through<br />

targeting several other phosphorylation sites.<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Phosphorylation/Dephosphorylation<br />

Many current cancer treatments, including certain<br />

classes of chemotherapeutics, induce cytotoxicity<br />

by damaging DNA. However, many cancers become<br />

resistant to these therapies. Thus, modulating DNAdamage<br />

responses to selectively enhance the sensitivity<br />

of cancer cells to these therapies is highly desirable.<br />

<strong>Inhibitor</strong>s of Chk1 and Chk2 have shown potential<br />

to enhance the efficacy of DNA-damaging cancer<br />

therapeutic agents by selectively increasing the<br />

sensitivity of tumor cells.<br />

References:<br />

Sorenson, C.S., et al. 2005. Nat. Cell Biol. 7, 95.<br />

Zhou, B.B.S. and Bartek, J. 2004. Nat. Rev. Cancer 4, 2 6.<br />

Craig, A., et al. 2003. EMBO Rep. 4, 787.<br />

O’Neill, T., et al. 2002. J. Biol. Chem. 277, 6 02.<br />

Zhao, H., et al. 2002. Proc. Natl. Acad. Sci. USA 99, 4795.<br />

Graves, P.R., et al. 2000. J. Biol. Chem. 275, 5600.<br />

Hirao, A., et al. 2000. Science 287, 824.<br />

Mailand, N., et al. 2000. Science 288, 425.<br />

Zhou, B-B., et al. 2000. Nature 408, 433.<br />

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Phosphorylation/Dephosphorylation<br />

Checkpoint <strong>Inhibitor</strong>s<br />

Product Cat. No. Comments Size Price<br />

N Chk2 <strong>Inhibitor</strong> 220485 {5-(2-Amino-5-oxo-1,5-dihydroimidazol-4-ylidine)-3,4,5,10-2H-azepino[3,4-b]<br />

indol-1-one, HCl}<br />

A cell-permeable, potent inhibitor of Chk2 (IC 50 = 8 nM) with good selectivity over<br />

MEK , Chk , CKId, PKCa, PKCbII, and CKII (IC 50 = 89 nM, 237 nM, .352 mM, 2.539 mM,<br />

3.38 mM, and > 0.0 mM, respectively).<br />

N Chk2 <strong>Inhibitor</strong> II 220486 [2-(4-(4-Chlorophenoxy)phenyl)-1H-benzimidazole-5-carboxamide]<br />

A cell-permeable, potent, ATP-competitive inhibitor of Chk2 with an IC 50 of 5 nM and a<br />

K i of 37 nM. Displays ~ 000-fold greater selectivity over Cdk /B and CKI (IC 50 = 2 mM<br />

and 7 mM) and weakly affects the activities of a panel of 3 kinases ( < 25% inhibition<br />

at 0 mM), including Chk .<br />

Debromohymenialdisine,<br />

Stylotella aurantium<br />

252010 (DBH)<br />

An alkaloid isolated from a shallow-water marine sponge that acts as a highly selective<br />

inhibitor of checkpoint kinases Chk (IC 50 = 3 mM) and Chk2 (IC 50 = 3.5 mM). Inhibition is<br />

competitive with respect to ATP and does not affect the activities of other kinases.<br />

N Isogranulatimide 371957 (IGR)<br />

A cell-permeable, potent, and ATP-competitive inhibitor of Chk (IC = 00 nM) and<br />

50<br />

GSK-3b (IC = 500 nM). Displays selectivity over G DNA damage checkpoint, Chk2,<br />

50 2<br />

Cdk , and DNA-PK (IC = 3 mM, 4 mM, 0 mM, and 0 mM, respectively). Only minimally<br />

50<br />

affects the activities of several other kinases tested including PKA, PKBa, and PKCb<br />

(IC ≥ 40 mM).<br />

50<br />

N SB 2 8078 559402 [9,10,11,12,-Tetrahydro-9,12-epoxy-1H-diindolo(1,2,3-fg:3´,2´,1´-kl)pyrrolo<br />

(3,4-i)(1,6)benzodiazocine-1,3(2H)-dione]<br />

An indolocarbazole derivative that acts as a potent and selective inhibitor of checkpoint<br />

kinase (Chk ) in vitro. Inhibits Chk phosphorylation of Cdc25C (IC = 5 nM).<br />

50<br />

SB-2 8078 is a much weaker inhibitor of Cdc2 (IC = 250 nM) and PKC (IC = mM).<br />

50 50<br />

N Scytonemin, Lyngbya<br />

sp.<br />

565715 A cell-permeable, selective, reversible, non-toxic, and mixed type inhibitor of polo-like<br />

kinase (Plk ; IC 50 = 2.0 mM) and PKC bI (IC 50 = 3.4 mM) and exhibits anti-proliferative<br />

and anti-inflammatory properties. Also inhibits several other cell cycle regulatory<br />

kinases (IC 50 = 2.7, 3.0, .2, and .4 mM respectively for PKC bII , Cdk /B, Mytl, and Chk ).<br />

To view all Checkpoint Signaling and DNA Repair research-related<br />

products and to request your free wall poster, visit our<br />

Checkpoint Signaling and DNA Repair Interactive Pathways at:<br />

www.calbiochem.com/checkpoint<br />

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mg $93<br />

00 mg $98<br />

mg $ 39<br />

mg $ 06<br />

mg $98<br />

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Cyclin-Dependent Kinase (Cdk) <strong>Inhibitor</strong>s<br />

Cell cycle progression is regulated by a series of<br />

sequential events that include the activation and<br />

subsequent inactivation of cyclin dependent kinases<br />

(Cdks) and cyclins. Cdks are a group of serine/threonine<br />

kinases that form active heterodimeric complexes by<br />

binding to their regulatory subunits, cyclins. Eleven<br />

members of the Cdk family are reported so far, and each<br />

member of the family has a specific function in cellcycle.<br />

Several Cdks, mainly Cdk2, Cdk4, and Cdk6, work<br />

cooperatively to drive cells from G 1 phase into S phase.<br />

Cdk4 and Cdk6 are involved in early G 1 phase, whereas<br />

Cdk2 is required to complete G 1 phase and initiate S<br />

phase. Both Cdk4 and Cdk6 form active complexes with<br />

the D type of cyclins (cyclins D1, D2, and D3). Cdk2 is<br />

sequentially activated by the E type of cyclins, cyclins<br />

E1 and E2, during G 1 /S transition stage. A-type cyclins,<br />

cyclin A1 and A2, play a role during S phase. Cdk2/cyclin<br />

A complex appears during late S phase and plays a role<br />

in progression of DNA replication. The cyclins that are<br />

involved in regulating the passage of the cell from the G 2<br />

checkpoint into M phase are known as mitotic cyclins and<br />

they associate with mitotic Cdks. Similarly, cyclins that<br />

are involved in the passage of cells from the G 1 checkpoint<br />

into S phase are called G 1 cyclins. Once the Cdks have<br />

completed their role, they undergo a rapid programmed<br />

proteolysis via ubiquitin-mediated delivery to the<br />

proteasome complex.<br />

It is important to note here that Cdk5, a serine-threonine<br />

kinase, originally cloned from HeLa cells, is not directly<br />

involved in cell cycle. It is primarily active in neuronal<br />

Cyclin B<br />

Cdk1<br />

Cdk1<br />

Cyclin B<br />

Cyclin A<br />

Cdk1<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

H<br />

E2F<br />

E2F<br />

Cdk2<br />

E2F<br />

Cyclin A<br />

Cdk4<br />

Cyclin D<br />

Cdk2<br />

Phosphorylation/Dephosphorylation<br />

tissue. Cdk5, in conjunction with its neuron-specific<br />

activator p35 (Cdk5/p35), has been implicated in tau<br />

hyperphosphorylation. Cdk5/p35 is also involved<br />

in neuronal migration and differentiation during<br />

development of the nervous system.<br />

The enzymatic activity of a Cdk is regulated at three<br />

levels: cyclin association, subunit phosphorylation, and<br />

association with Cdk inhibitors. When cyclins initially<br />

bind to Cdks, the resulting complex is inactive. The<br />

phosphorylation of Cdks by Cdk activating kinases leads<br />

to their activation. Two main categories of Cdk inhibitors<br />

are reported in cells. They are the INK and the WAF/Kip<br />

families. The members of the INK family, INK4A (p16),<br />

INK4B (p15), INK4C (p18), and INK4D (p19), bind to Cdk4<br />

and Cdk6 and block their interaction with D type cyclins<br />

thereby inhibiting Cdk activity. The members of the<br />

WAF/Kip family, WAF1 (p21), Kip1 (p27), and Kip2 (p57),<br />

form heterotrimeric complexes with the G 1 /S Cdks. Their<br />

major action is reported to be the inhibition of the kinase<br />

activity of Cdk/cyclin E complex. From a therapeutic<br />

standpoint, Cdks are considered promising targets in<br />

cancer chemotherapy. The most promising strategies<br />

involve designing inhibitors that either block Cdk activity<br />

or prevent their interaction with cyclins. Most of the<br />

currently available molecules target the ATP-binding site<br />

of these enzymes. Such an approach might create serious<br />

problems as catalytic residues are well conserved across<br />

eukaryotic protein kinases. However, compounds such<br />

as Flavopiridol, Olomoucine, and Butyrolactone-1 that<br />

exhibit greater specificity for Cdks have shown promise.<br />

Cyclin E<br />

References:<br />

Sridhar, J. et al. 2006. AAPS J. 8, E204.<br />

Murray, A.W. 2004. Cell 116, 22 .<br />

Fischer, P.M., et al. 2003. Prog. Cell Cycle Res. 5, 235.<br />

Dai, Y., and Grant, S. 2003. Curr. Opin. Pharmacol. 3, 362.<br />

Harper, J.W., and Adams, P.D. 200 . Chem. Rev. 101, 25 .<br />

Ekholm, S.V., and Reed, S.I. 2000. Curr. Opin. Cell Biol. 12, 676.<br />

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3


Phosphorylation/Dephosphorylation<br />

Selected Cdk <strong>Inhibitor</strong>s (IC 50 in mM)<br />

Product Cat. No. Cdk1 Cdk2 Cdk4 Cdk5<br />

Alsterpaullone 26870 0.035 – – –<br />

Alsterpaullone, 2-Cyanoethyl 2687 0.000230 – 0.030<br />

Aloisine A 28 25 0. 5 (B) 0. 2 (A), 0.40 (E) 0.20 (p25), 0. 6 (p35)<br />

Aloisine A, RP 06 28 35 0.70 (B) .50 (p35)<br />

N Aminopurvalanol A 64640 0.033 0.033 (A), 0.028 (E) 0.020 (p35)<br />

Bohemine 203600 .0 0.80 (E) – –<br />

Cdk <strong>Inhibitor</strong>, p35 2 9457 0. 0 0.80 (E) – –<br />

Cdk <strong>Inhibitor</strong> 2 7695 5.8 – – 25.0<br />

Cdk <strong>Inhibitor</strong>, CGP745 4A 2 7696 0.025 (B) – – –<br />

Cdk <strong>Inhibitor</strong> III 2 7697 28.8 (B) – – –<br />

N Cdk /2 <strong>Inhibitor</strong> II, NU6 02 2 77 3 0.0095 (B) 0.0054 (A3) .6 (D ) –<br />

Cdk /5 <strong>Inhibitor</strong> 2 7720 0.60 (B) – – 0.40 (p25)<br />

Cdk2 <strong>Inhibitor</strong> I 2 9442 – 0.038 a – –<br />

Cdk2 <strong>Inhibitor</strong> II 2 9445 0.78 0.060 – –<br />

Cdk2 <strong>Inhibitor</strong> III 238803 4.2 (B) 0.5 (A and E) 2 5.0 (D ) –<br />

Cdk2/5 <strong>Inhibitor</strong> 2 9448 – 2.0 b – 2.0 b<br />

N Cdk4 <strong>Inhibitor</strong> 2 9476 2. (B) 0.52 (E) 0.076 (D ) –<br />

N Cdk4 <strong>Inhibitor</strong> II, NSC 625987 2 9477 > 00 (A) > 00 (E) 0.20 (D ) –<br />

Fascaplysin, Synthetic 34 25 > 00 > 50 (A and E) 0.35 (D ) 20.0<br />

Hymenialdisine, Stylissa damicornis 400085 0.022 0.040 (E) 0.028<br />

Indirubin-3’-monoxime 402085 0. 8 - - 0. 0<br />

Indirubin-3’-monoxime, 5-Iodo- 402086 0.025 - - 0.020<br />

Indirubin-3’-monoxime-5-sulphonic Acid 402088 0.005 - - 0.007<br />

Kenpaullone 422000 0.40 (B) 0.68 (A), 7.5 (E) - 0.85<br />

Olomoucine 495620 7.0 (B) 7.0 (A and E) > 000 (D) 3.0 (p35)<br />

Olomoucine II 49562 0.02 (B)<br />

Olomoucine, Iso 495622 > 500 (B) > 000 (D) > 000 (p35)<br />

Olomoucine, N 9 -Isopropyl- 495623 2.0<br />

Oxindole I 499600 0.2 0.0 (E) 4.90<br />

Protein Kinase inhibitor, DMAP 476493 300 (B)<br />

Purvalanol A 540500 0.004 (B) 0.07 (A), 0.035 (E) 0.075 (p35)<br />

Roscovitine 557360 0.65 0.7 (A and E) > 000 0.2 (p35)<br />

Roscovitine, (S)-Isomer 557362 0.80 (B)<br />

Staurosporine 569397 0.009 0.007 - -<br />

SU95 6 572650 0.04 (B) 0.022 (A) 0.20 (D )<br />

WHI-P 80, Hydrochloride 68 500 .0<br />

Key: a = K d ; b = K i . Letters in parentheses refer to associated cyclins or Cdks.<br />

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Cyclin-Dependent Kinase (Cdk) <strong>Inhibitor</strong>s<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Phosphorylation/Dephosphorylation<br />

Product Cat. No. Comments Size Price<br />

Aloisine A 128125 {7-n-Butyl-6-(4-hydroxyphenyl)[5H]pyrrolo[2,3-b]pyrazine; RP107}<br />

A potent, cell-permeable, selective, reversible, and ATP-competitive inhibitor of Cdks<br />

(IC 50 = 50 nM for Cdk /cyclin B, 20 nM for Cdk2/cyclin A, 400 nM for Cdk2/cyclin E,<br />

and 60 nM for Cdk5/p35). Also inhibits GSK-3 (IC 50 = 500 nM for GSK-3a and .5 mM<br />

for GSK-3b), JNK (IC 50 ~3– 0 mM), ERKs (IC 50 = 8 mM for ERK and 22 mM for ERK2),<br />

PIM (IC 50 > 0 mM), and insulin receptor tyrosine kinase (IC 50 = 60 mM).<br />

Aloisine, RP 06 128135 {7-n-Butyl-6-(4-methoxyphenyl)[5H]pyrrolo[2,3-b]pyrazine; RP106}<br />

A cell-permeable, potent, selective, ATP-competitive inhibitor of Cdk /cyclin B<br />

(IC 50 = 700 nM), Cdk5/p25 (IC 50 = .5 mM), and GSK-3 (IC 50 = 920 nM).<br />

Alsterpaullone 126870 {9-Nitro-7,12-dihydroindolo[3,2-d][1]benzazepin-6(5H)-one}<br />

A potent inhibitor of Cdk /cyclin B (IC 50 = 35 nM). Also inhibits the activity of Cdk5/p25dependent<br />

phosphorylation of DARPP-32. One of the most active paullones that acts by<br />

competing with ATP for binding to GSK-3b and inhibits the phosphorylation of tau.<br />

N Alsterpaullone,<br />

2-Cyanoethyl<br />

126871 An Alsterpaullone (Cat. No. 26870) derivative that acts as a highly potent and ATPcompetitive<br />

preferential inhibitor of Cdk /B and GSK-3b (IC 50 = 230 pM and 800 pM,<br />

respectively; [ATP] = 5 mM), and displays ~37-fold greater selectivity over Cdk5/p25<br />

(IC 50 = 30 nM). Shown to inhibit other kinases in a commercially available testing screen<br />

panel (pIC 50 = -logIC 50 [M]; pIC 50 ~ 7.5, 7.0, 7.0, 6.5, 6.5, 6.0, and 6.0 for Cdk2/A, Cdk4/D ,<br />

GSK-3b, PDGFRb, Src, VEGFR-2, and VEGFR-3, respectively; [ATP] = mM).<br />

N Aminopurvalanol A 164640 [(2R)-2-((6-((3-Amino-5-chlorophenyl)amino)-9-(1-methylethyl)-9H-purin-2-yl)amino)-<br />

3-methyl-1-butanol; NG-97]<br />

A cell-permeable, 2,6,9-trisubstituted purine analog with antitumor properties<br />

(GI 50 ~ .8 mM in the NCI 60-cell panel in vitro activity screen, potently inhibits the<br />

growth of KM 2 colon cancer cells with a GI 50 of 30 nM). Acts as a reversible and ATPcompetitive<br />

inhibitor of Cdks (IC 50 = 33 nM for Cdk /cyclin B and Cdk2/cyclin A, 28 nM<br />

for Cdk2/cyclin E, and 20 nM for Cdk5/p35), and displays ~ 00-fold greater selectivity<br />

over a panel of kinases tested (IC 50 ≥ 2.4 mM).<br />

Bohemine 203600 {[6-Benzylamino-2-(3-hydroxypropylamino)-9-isopropylpurine}<br />

A synthetic, cell-permeable, Cdk inhibitor (IC 50 = mM) that is structurally similar to<br />

Olomoucine (Cat. No. 495620) and Roscovitine (Cat. No. 557360).<br />

N Cdc2-Like Kinase<br />

<strong>Inhibitor</strong>, TG003<br />

219479 [Clk <strong>Inhibitor</strong>, TG003; (Z)-1-(3-Ethyl-5-methoxy-2,3-dihydrobenzothiazol-<br />

2-ylidene)propan-2-one]<br />

A cell-permeable dihydrobenzothiazolo compound that acts as a potent, specific,<br />

reversible, and ATP-competitive inhibitor of Clk-family of kinases (K i = 0 nM for mClk /<br />

Sty; IC 50 = 5 nM, 20 nM, 200 nM, and > 0 mM for mClk4, mClk , mClk2, and mClk3,<br />

respectively). Does not affect the activities of SRPK , SRPK2, PKA, or PKC up to mM.<br />

Cdk <strong>Inhibitor</strong>, p35 219457 [2-(3-Hydroxypropylamino)-6-(o-hydroxybenzylamino)-9-isopropylpurine]<br />

An analog of Olomoucine (Cat. No. 495620) that acts as a potent inhibitor of Cdk<br />

(IC 50 = 00 nM) and Cdk2 (IC 50 = 80 nM).<br />

Cdk <strong>Inhibitor</strong> 217695 [3-(2-Chloro-3-indolylmethylene)-1,3-dihydroindol-2-one]<br />

A selective, ATP-competitive inhibitor of Cdk /cyclin B (IC 50 = 5.8 mM for Cdk and<br />

25 mM for Cdk5). Does not affect the activity of GSK-3b even at 00 mM<br />

concentrations. Binds to the ATP pocket in the Cdk active site.<br />

Cdk <strong>Inhibitor</strong>,<br />

CGP745 4A<br />

217696 [N-(cis-2-Aminocyclohexyl)-N-(3-chlorophenyl)-9-ethyl-9H-purine-2,6-diamine;<br />

CGP74514A]<br />

A cell-permeable, potent, and selective inhibitor of Cdk /cyclin B (IC = 25 nM).<br />

50<br />

Cdk <strong>Inhibitor</strong> III 217697 {Ethyl-(6-hydroxy-4-phenylbenzo[4,5]furo[2,3-b])pyridine-3-carboxylate}<br />

A cell-permeable and selective inhibitor of Cdk /cyclin B (IC 50 = 28.8 mM).<br />

N Cdk /2 <strong>Inhibitor</strong> II,<br />

NU6 02<br />

217713 [6-Cyclohexylmethoxy-2-(4´-sulfamoylanilino)purine]<br />

A 2,6-disubstituted purine compound that acts as a potent and ATP-competitive<br />

inhibitor of Cdk /cyclin B and Cdk2/cyclin A3 (IC 50 = 9.5 nM and 5.4 nM). Displays greater<br />

selectivity for Cdk /2 over other kinases tested (IC 50 = 600 nM, 800 nM, 900 nM, and<br />

.6 mM for ROCKII, PDK , DYRK A and Cdk4/D , respectively). Shown to inhibit human<br />

MCF-7 breast carcinoma cell growth with a GI 50 of 8 mM.<br />

5 mg $90<br />

5 mg $73<br />

mg $83<br />

mg $ 39<br />

5 mg $ 52<br />

mg<br />

5 mg<br />

$60<br />

$ 46<br />

5 mg $84<br />

mg $72<br />

5 mg $ 0<br />

5 mg $ 26<br />

mg<br />

5 mg<br />

mg<br />

5 mg<br />

$84<br />

$299<br />

$57<br />

$ 45<br />

Technical Support<br />

Phone 800 628 8470<br />

E-mail calbiochem@emdbiosciences.com<br />

5


Phosphorylation/Dephosphorylation<br />

Cyclin-Dependent Kinase (Cdk) <strong>Inhibitor</strong>s, continued<br />

Product Cat. No. Comments Size Price<br />

N Cdk /2 <strong>Inhibitor</strong> III 217714 A cell-permeable triazolo-diamine compound that displays anti-proliferative properties<br />

in various human cancer cells (IC 50 = 20 nM, 35 nM and 92 nM in HCT- 6, HeLa and A375<br />

cells, respectively). Acts as a highly potent ATP-competitive inhibitor of Cdk /B and Cdk2/<br />

A (IC 50 = 600 pM and 500 pM) with selectivity over VEGF-R2 and GSK-3b<br />

(IC 50 = 32 nM and 40 nM). Only minimally affects a panel of kinases tested (IC 50 = .0 mM,<br />

.6 mM, 2.8 mM, 5.2 mM, 8.9 mM, > 0 mM, and > 00 mM for ERK-2, PDGF-Rb, CKI, PKA,<br />

CaMKII, EGF-R or insulin kinase-b, and CKII, respectively).<br />

Cdk /5 <strong>Inhibitor</strong> 217720 (3-Amino-1H-pyrazolo[3,4-b]quinoxaline)<br />

A selective and potent inhibitor of Cdk and Cdk5 (IC 50 = 600 nM for Cdk /cyclin B and<br />

400 nM for Cdk5/p25 respectively).<br />

Cdk2 <strong>Inhibitor</strong> I 219442 (YSFVHHGFFNFRVSWREMLA)<br />

A potent inhibitor of Cdk2 (K d = 38 nM).<br />

Cdk2 <strong>Inhibitor</strong> II 219445 (Compound 3)<br />

A potent and selective inhibitor of Cdk2 (IC 50 = 60 nM).<br />

Cdk2 <strong>Inhibitor</strong> III 238803 [2(bis-(Hydroxyethyl)amino)-6-(4-methoxybenzylamino)-9-isopropyl-purine]<br />

A cell-permeable, selective, reversible, ATP-competitive inhibitor of Cdk2/cyclin A and<br />

Cdk2/cyclin E (IC 50 = 500 nM).<br />

N Cdk2 <strong>Inhibitor</strong> IV,<br />

NU6 40<br />

238804 A highly cell-permeable purine compound that acts as a selective and ATP-competitive<br />

inhibitor of Cdks (IC 50 = 6.6 mM, 0.4 mM, 5.5 mM, 5 mM, and 3.9 mM for Cdk /B, Cdk2/<br />

A, Cdk4/D, Cdk5/p25, and Cdk7/H, respectively), and displays anticancer properties.<br />

Shown to cause cell cycle arrest at G 2 -M phase, and induce apoptosis by activating<br />

caspases and downregulating survivin. Further, synergistically potentiates paclitaxel<br />

cytotoxicity and apoptotic response in HeLa, OAW42/e, and OAW42/Surv cells.<br />

Cdk2/5 <strong>Inhibitor</strong> 219448 [N 4 -(6-Aminopyrimidin-4-yl)-sulfanilamide, HCI; PNU 112455A]<br />

An aminopyrimidine derivative that acts as a selective inhibitor of Cdk2/cyclin E and<br />

Cdk5/p25 (K i = 2 mM). The inhibition is competitive with respect to ATP.<br />

Cdk2/Cyclin <strong>Inhibitor</strong>y<br />

Peptide I<br />

Cdk2/Cyclin <strong>Inhibitor</strong>y<br />

Peptide II<br />

238801 (Tat-LFG; YGRKKRRQRRRGPVKRRLFG)<br />

A cell-permeable peptide inhibitor derived from the consensus sequence, PVKRRLFG,<br />

that serves as the docking site for Cdk2/cyclin complexes. Blocks the phosphorylation of<br />

substrates by Cdk2/cyclin A and Cdk2/cyclin E complexes.<br />

238802 (Tat-LDL; YGRKKRRQRRRGPVKRRLDL)<br />

A cell-permeable peptide inhibitor derived from the cell-cycle regulatory transcription<br />

factor, E2F, that is derived from the Cdk2/cyclin A binding motif. Blocks the<br />

phosphorylation of substrates by Cdk2/cyclin A and Cdk2/cyclin E complexes.<br />

Cdk4 <strong>Inhibitor</strong> 219476 {2-Bromo-12,13-dihydro-5H-indolo[2,3-a]pyrrolo[3,4-c]carbazole-5,7(6H)-dione}<br />

A cell-permeable, potent, selective ATP-competitive inhibitor of Cdk4/cyclin D<br />

(IC 50 = 76 nM).<br />

N Cdk4 <strong>Inhibitor</strong> II, NSC<br />

625987<br />

219477 [1,4-Dimethoxy-9-thio(10H)-acridone]<br />

A potent, substrate-competitive inhibitor of Cdk4/cyclin D (IC 50 = 200 nM). Displays<br />

~500-fold greater selectivity for Cdk4/cyclin D over Cdc2/cyclin A (Cdk /cyclin A),<br />

Cdk2/cyclin A, and Cdk2/cyclin E (IC 50 > 00 mM).<br />

Compound 52 234503 [2-(2-Hydroxyethylamino)-6-(3-chloroanilino)-9-isopropylpurine]<br />

A potent, cell-permeable, and selective inhibitor of the cell cycle-regulating kinase,<br />

Cdc28p (IC 50 = 7 mM), and the related Pho85p kinase (IC 50 = 2 mM).<br />

mg $88<br />

5 mg $ 8<br />

mg $ 23<br />

6 Orders Phone 800 854 34 7<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Fax 800 776 0999<br />

Web www.emdbiosciences.com/calbiochem<br />

mg<br />

5 mg<br />

mg<br />

5 mg<br />

$39<br />

$ 23<br />

$58<br />

$200<br />

5 mg $ 39<br />

5 mg $93<br />

500 mg $ 0<br />

500 mg $ 0<br />

mg $84<br />

5 mg $ 8<br />

mg $65<br />

Fascaplysin, Synthetic 341251 A cell-permeable, potent, ATP-competitive inhibitor of Cdk4/cyclin D (IC 50 = 350 nM). mg $79<br />

GSK-3 <strong>Inhibitor</strong> IX 361550 BIO; (2'Z,3'E)-6-Bromoindirubin-3'-oxime<br />

A cell-permeable, highly potent, selective, reversible, and ATP-competitive inhibitor of<br />

GSK-3a/b (IC 50 = 5 nM). At higher concentrations, inhibits Cdk2/cyclin A (IC 50 = 300 nM)<br />

and Cdk5/p25 (IC 50 = 83 nM).<br />

InSolution GSK-3<br />

<strong>Inhibitor</strong> IX<br />

Hymenialdisine, Stylissa<br />

damicornis<br />

mg $95<br />

361552 A 0 mM (500 mg/ 40 ml) solution of GSK-3 <strong>Inhibitor</strong> IX (Cat. No. 36 550) in DMSO. 500 mg $63<br />

400085 {4-(2-Amino-4-oxo-2-imidazolidin-5-ylidene)-2-bromo-4,5,6,7-tetrahydropyrrolo<br />

2,3-c]azepin-8-one; HD; 10Z-Hymenialdisine}<br />

A cell-permeable, ATP-competitive inhibitor of MEK- (IC = 6 nM), Cdk /cyclin B<br />

50<br />

(IC = 22 nM); Cdk2/cyclin E (IC = 40 nM); Cdk5/p35 (IC = 28 nM); and GSK-3b<br />

50 50 50<br />

(IC = 0 nM).<br />

50<br />

500 mg $207


Cyclin-Dependent Kinase (Cdk) <strong>Inhibitor</strong>s, continued<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Phosphorylation/Dephosphorylation<br />

Product Cat. No. Comments Size Price<br />

N Indirubin Derivative<br />

E804<br />

402081 A cell-permeable indirubin derivative (IDR) that blocks the Src-Stat3 signaling pathway<br />

and displays antitumor properties. Inhibits Cdk /E, Cdk2/A, and Cdk /B (IC 50 = 2 0 nM,<br />

540 nM, and .65 mM, respectively); minimally affects Jak at 0 mM. Also inhibits the<br />

activity of Src kinase (IC 50 = 430 nM).<br />

Indirubin-3´-monoxime 402085 A potent cell-permeable inhibitor of GSK-3b (IC 50 = 22 nM) and Cdks (IC 50 = 80 nM<br />

for Cdk and 00 nM for Cdk5).<br />

Indirubin-3´monoxime,<br />

5-Iodo-<br />

Indirubin-3´monoxime-5-sulphonic<br />

Acid<br />

402086 A highly potent, cell-permeable inhibitor of GSK-3b (IC = 9 nM) and Cdk<br />

50<br />

(IC = 25 nM) and Cdk5 (IC = 20 nM). Inhibition is competitive with respect to ATP.<br />

50 50<br />

402088 A potent and selective inhibitor of Cdk and Cdk5 (IC = 5 nM for Cdk ; IC = 7 nM<br />

50 50<br />

for Cdk5). Inhibition is competitive with respect to ATP. Also acts as a potent inhibitor<br />

of GSK-3b (IC = 80 nM).<br />

50<br />

Kenpaullone 422000 {9-Bromo-7,12-dihydroindolo[3,2-d][1]benzazepin-6(5H)-one; NSC-664704}<br />

A potent, cell-permeable, ATP-competitive inhibitor of GSK-3b (IC 50 = 230 nM), Lck<br />

(IC 50 = 470 nM) and Cdks. Inhibits Cdk /cyclin B (IC 50 = 400 nM, Cdk2/cyclin A<br />

(IC 50 = 680 nM), Cdk2/cyclin E (IC 50 = 7.5 mM), Cdk5/p25 (IC 50 = 850 nM). Also Inhibits<br />

c-Src (IC 50 = 5 mM), casein kinase II (IC 50 = 20 mM), ERK (IC 50 = 20 mM), and ERK2<br />

(IC 50 = 9 mM) at higher concentrations.<br />

Olomoucine 495620 [2-(2-Hydroxyethylamino)-6-benzylamino-9-methylpurine]<br />

A potent, selective, ATP-competitive inhibitor of p34 cdc2 /cyclin B (IC 50 = 7 mM) and<br />

related kinases, including p33 cdk2 /cyclin A (IC 50 = 7 mM), p33 cdk2 /cyclin E (IC 50 = 7 mM),<br />

p33 cdk5 /p35 (IC 50 = 3 mM), and p44 MAPK (IC 50 = 25 mM).<br />

mg $88<br />

mg $ 0<br />

mg $99<br />

mg $99<br />

mg $85<br />

N InSolution Olomoucine 495624 A 50 mM (5 mg/336 ml) solution of Olomoucine (Cat. No. 495620) in DMSO. 5 mg $ 39<br />

5 mg $ 52<br />

Olomoucine II 495621 [6-(2-Hydroxybenzylamino)-2-((1R)-(hydroxymethyl)propyl)amino)-9-isopropylpurine]<br />

A cell-permeable, potent, ATP-competitive inhibitor of Cdk /cyclin B (IC = 20 nM).<br />

50<br />

Olomoucine, Iso- 495622 [6-Benzylamino-2-(2-hydroxyethylamino)-7-methylpurine; Iso-Olomoucine]<br />

A negative control compound for studies involving Olomoucine (Cat. No. 495620)<br />

(IC > 500 mM for p34 50 cdc2 /cyclin B; IC > mM for p33 50 cdk5 /p35; IC > mM for p34 50 cdk4 /<br />

cyclin D).<br />

Olomoucine,<br />

N9-Isopropyl- N Pfmrk <strong>Inhibitor</strong>,<br />

WR 2 6 74<br />

495623 A Cdk kinase inhibitor (IC = 2 mM) that is more potent than Olomoucine<br />

50<br />

(Cat. No. 495620).<br />

528140 [5-Bromo-3-(2-(4-Fluorophenyl)-2-oxoethylidine)-1,3-dihydroindol-2-one]<br />

A cell-permeable oxindole compound that acts as an ATP-competitive and specific inhibitor<br />

of Pfmrk (IC = .4 mM), a Cdk from the malaria-causing parasite Plasmodium falciparum.<br />

50<br />

Displays low activity against PfPK5 (IC = 90 mM) and human Cdk /B (IC = 29 mM).<br />

50 50<br />

Purvalanol A 540500 [2-(1R-Isopropyl-2-hydroxyethylamino)-6-(3-chloroanilino)-9-isopropyl-purine]<br />

A potent, cell-permeable, and selective inhibitor of Cdks (IC = 4 nM for Cdc2/cyclin B;<br />

50<br />

70 nM for Cdk2/cyclin A; 35 nM for Cdk2/cyclin E; and 75 nM for Cdk5/p35).<br />

Roscovitine 557360 [2-(R)-(1-Ethyl-2-hydroxyethylamino)-6-benzylamino-9-isopropylpurine]<br />

A potent, selective, ATP-competitive inhibitor of Cdks. Inhibits p34cdc2 /cyclin B<br />

(IC = 650 nM), p33 50 cdk2 /cyclin A (IC = 700 nM), p33 50 cdk2 /cyclin E (IC = 700 nM),<br />

50<br />

and p33cdk2 /p35 (IC = 200 nM).<br />

50<br />

mg<br />

5 mg<br />

mg<br />

5 mg<br />

$34<br />

$ 39<br />

$40<br />

$ 79<br />

5 mg $ 04<br />

5 mg $95<br />

mg $67<br />

N InSolution Roscovitine 557364 A 50 mM (5 mg/282 ml) solution of Roscovitine (Cat. No. 557360) in DMSO. 5 mg $ 39<br />

mg $46<br />

Roscovitine, (S)-Isomer 557362 [2-(S)-(1-Ethyl-2-hydroxyethylamino)-6-benzylamino-9-isopropylpurine]<br />

The (S)-enantiomer of Roscovitine (Cat. No. 557360). Potently inhibits p34cdc2 /cyclin B<br />

kinase (IC = 800 nM).<br />

50<br />

SU95 6 572650 {3-[1-(3H-Imidazol-4-yl)-meth-(Z)-ylidene]-5-methoxy-1,3-dihydro-indol-2-one}<br />

A cell-permeable, potent, and selective ATP-competitive inhibitor of Cdks (IC = 22 nM<br />

50<br />

for Cdk2/cyclin A; 40 nM for Cdk /cyclin B; and 200 nM for Cdk4/cyclin D ).<br />

WHI-P 80,<br />

Hydrochloride<br />

681500 [4-(3´-Hydroxyphenyl)amino-6,7-dimethoxyquinazoline, HCl]<br />

An ATP-competitive inhibitor of Cdk2 (IC 50 = mM).<br />

Cyclin-Dependent Protein Kinase <strong>Inhibitor</strong> Set<br />

Contains 5 mg of Olomoucine (Cat. No. 495620), mg of Iso-Olomoucine (Cat. No. 495622), and mg of Roscovitine (Cat. No. 557360).<br />

Cat. No. 219428 1 set $163<br />

mg<br />

5 mg<br />

$35<br />

$ 39<br />

5 mg $ 00<br />

500 mg<br />

mg<br />

$79<br />

$ 27<br />

Technical Support<br />

Phone 800 628 8470<br />

E-mail calbiochem@emdbiosciences.com<br />

7


Phosphorylation/Dephosphorylation<br />

DNA-Dependent Protein Kinase (DNA-PK) <strong>Inhibitor</strong>s<br />

DNA-dependent protein kinase (DNA-PK) is a trimeric<br />

nuclear serine/threonine kinase composed of a large<br />

catalytic subunit and two DNA-targeting proteins, Ku70<br />

and Ku80. The catalytic subunit, by itself, is inactive. It<br />

relies on other DNA-PK components to direct it to the<br />

DNA and trigger its kinase activity. The amino acid<br />

sequence of the DNA-PK suggests that it is a member of the<br />

phosphatidylinositol-3-kinase (PI 3-K) superfamily. DNA-<br />

PK recognizes and initiates repair of DNA double-strand<br />

breaks produced by ionizing radiation and certain drugs.<br />

DNA-PK phosphorylates protein targets and<br />

also undergoes auto-phosphorylation. The autophosphorylation<br />

activity has been shown to be<br />

essential for repair of random double-strand breaks.<br />

DNA-PK phosphorylates p53 on Ser 15 and Ser 37 leading<br />

to stabilization and inhibition of p53 degradation by<br />

MDM2. Phosphorylation of Ser 15 is suggested to be<br />

essential for p53 function. Ser 15 resides within the<br />

critical N-terminal region of p53, which controls the<br />

interaction of p53 with the transcriptional apparatus<br />

and with the MDM2 protein. Phosphorylation of Ser 15<br />

weakens both the association of p53 with MDM2 and the<br />

DNA-Dependent Protein Kinase (DNA-PK) <strong>Inhibitor</strong>s<br />

repression of p53 by MDM2. Phosphorylation of DNA-PK<br />

by the PKC d catalytic fragment leads to the dissociation<br />

of DNA-PK from DNA, resulting in its inactivation.<br />

DNA-PK represents a new target for cancer drug<br />

development. Cells defective in DNA-PK components<br />

are reported to be hypersensitive to killing by ionizing<br />

radiation owing to their inability to repair doublestranded<br />

breaks effectively. A number of small molecule<br />

inhibitors of DNA-PK catalytic subunit have been<br />

developed, which sensitize cells to DNA-damaging<br />

agents, but are relatively nontoxic in the absence of DNA<br />

breaks. These inhibitors may have clinical potential in<br />

the treatment of cancer.<br />

References:<br />

Collis, S.J., et al. 2005. Oncogene 24, 949.<br />

Wechsler, T., et al. 2004. Proc. Natl. Acad. Sci. USA 101, 247.<br />

Basu, A., 2003. J. Cell. Mol. Med. 7, 34 .<br />

Kashishian, A., et al. 2003. Mol. Cancer Ther. 2, 257.<br />

Woo, R.A., et al. 998. Nature 394, 700.<br />

Jackson, S.P., and Jeggo, P.A. 995. Trends Biochem. Sci. 20, 4 2.<br />

More online... www.calbiochem.com/inhibitors/DNAPK<br />

Product Cat. No. Comments Size Price<br />

DNA-PK <strong>Inhibitor</strong> 260960 (4,5-Dimethoxy-2-nitrobenzaldehyde; DMNB; DNA-Dependent Protein Kinase <strong>Inhibitor</strong>)<br />

A cell-permeable vanillin derivative that acts as a potent and selective inhibitor of<br />

DNA-PK (IC 50 = 5 mM) and DNA-PK-mediated double-strand break.<br />

DNA-PK <strong>Inhibitor</strong> II 260961 {DNA-Dependent Protein Kinase <strong>Inhibitor</strong> II; 2-(Morpholin-4-yl)-benzo[h]chromen-4-one;<br />

NU7026}<br />

A cell-permeable, potent, specific, and ATP-competitive inhibitor of DNA-PK (IC 50 = 230 nM).<br />

It is highly selective towards DNA-PK over other PI 3-kinase related enzymes (IC 50 = 3 mM<br />

for PI 3-kinase and > 00 mM for ATM and ATR).<br />

N DNA-PK <strong>Inhibitor</strong> III 260962 [1-(2-Hydroxy-4-morpholin-4-yl-phenyl)ethanone; IC86621]<br />

A cell-permeable aryl-morpholino compound that acts as a potent, selective, ATPcompetitive<br />

inhibitor of DNA-PK (IC 50 = 20 nM) and PI 3-kinase catalytic subunit p 0b<br />

(IC 50 = 35 nM). It inhibits DNA-PK-mediated cellular DNA DSB (double-strand break)<br />

repair (EC 50 = 68 mM) and enhances DSB-induced antitumor activity both in vitro and in<br />

vivo.<br />

N DNA-PK <strong>Inhibitor</strong> IV 260963 (2-Hydroxy-4-morpholin-4-yl-benzaldehyde; IC60211)<br />

A morpholino-salicylaldehyde compound that acts as a potent, selective and ATPcompetitive<br />

inhibitor of DNA-PK (IC 50 = 430 nM). Inhibits PI 3-kinase catalytic subunit<br />

p 0-isozymes at higher concentrations (IC 50 = 0 mM, 2.8 mM, 5. mM, and 37 mM<br />

for a, b, d and g, respectively) and weakly inhibits a panel of several other kinases,<br />

including, ATM, CKII, GRK2, mTOR, PI3KC2a, PI3KC2b, PI3KC2g, and PI4Kb, even at<br />

50 mM.<br />

N DNA-PK <strong>Inhibitor</strong> V 260964 [AMA37; ArylMorpholine Analog 37; 1-(2-Hydroxy-4-morpholin-4-yl-phenyl)-<br />

phenyl-methanone]<br />

A potent, selective, and ATP-competitive inhibitor of DNA-PK (IC 50 = 270 nM). Inhibits<br />

PI 3-kinase catalytic subunit p 0-isozymes at higher concentrations (IC 50 = 32 mM,<br />

3.7 mM, 22 mM, and ~ 00 mM for a, b, d,and g, respectively) and weakly inhibits a panel<br />

of several other kinases, including, ATM, ATR, CKII, GRK2, mTOR, PI3KC2a, PI3KC2b,<br />

PI3KC2g, and PI4Kb, even at 50 mM.<br />

0 mg $68<br />

5 mg $ 37<br />

mg $84<br />

8 Orders Phone 800 854 34 7<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Fax 800 776 0999<br />

Web www.emdbiosciences.com/calbiochem<br />

mg<br />

5 mg<br />

mg<br />

5 mg<br />

$73<br />

$237<br />

$90<br />

$288


Glycogen Synthase Kinase-3 (GSK-3) <strong>Inhibitor</strong>s<br />

Glycogen synthase kinase-3 (GSK-3), a multifunctional<br />

serine/threonine kinase, is a key regulator of numerous<br />

signaling pathways. Two isoforms of GSK-3 are reported<br />

in mammals: a 51 kDa GSK-3a and a 47 kDa GSK-3b.<br />

GSK-3b is constitutively active in resting cells and<br />

treatment of cells with an agent, such as insulin, is<br />

shown to cause GSK-3 inactivation through a PI 3kinase<br />

(PI 3-K)-dependent mechanism. PI 3-K-induced<br />

activation of PKB/Akt results in phosphorylation of<br />

Ser 21 on GSK-3a and Ser 9 on GSK-3b, which inhibits<br />

GSK-3 activity. The phosphorylated N-terminus becomes<br />

a primed pseudosubstrate that occupies the positive<br />

binding pocket and the active site of the enzyme and<br />

acts as a competitive inhibitor for true substrates. This<br />

prevents phosphorylation of substrates. Arg 96 is shown<br />

to be a crucial component of the positive pocket that<br />

binds primed substrates. Small molecule inhibitors that<br />

fit in the positively charged pocket of the kinase domain<br />

of GSK-3b are useful for selectively inhibiting primed<br />

substrates. Several known GSK-3 substrates participate in<br />

a wide spectrum of cellular processes, including glycogen<br />

Glycogen Synthase Kinase <strong>Inhibitor</strong>s<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Phosphorylation/Dephosphorylation<br />

metabolism, transcription, translation, cytoskeletal<br />

regulation, intracellular vesicular transport, cell cycle<br />

progression, and apoptosis. Phosphorylation of these<br />

substrates by GSK-3b usually has an inhibitory effect.<br />

Abnormalities in pathways that use GSK-3 as a regulator<br />

have been linked to several disease conditions. Hence,<br />

GSK-3 has emerged as a potential therapeutic target,<br />

particularly in non-insulin-dependent diabetes mellitus,<br />

Alzheimer’s disease, developmental disorders, and<br />

cancer. Several new GSK-3 inhibitors have recently been<br />

developed, most of which act in an ATP competitive<br />

manner. <strong>Inhibitor</strong>s belonging to aloisines, the paullones,<br />

and the maleimide families, have shown promise as<br />

therapeutic agents. Due to its involvement in multiple<br />

pathways, selectivity of GSK-3 inhibition is an important<br />

factor in the development of inhibitors for therapeutic<br />

applications.<br />

Product Cat. No. Comments Size Price<br />

Aloisine A 128125 {7-n-Butyl-6-(4-hydroxyphenyl)[5H]pyrrolo[2,3-b]pyrazine; RP107}<br />

An inhibitor of GSK-3 (IC 50 = 500 nM for GSK-3a and .5 mM for GSK-3b). Also acts as a<br />

potent, selective, reversible, and ATP-competitive inhibitor of Cdks (IC 50 = 50 nM for Cdk /<br />

cyclin B, 20 nM for Cdk2/cyclin A, 400 nM for Cdk2/cyclin E, and 60 nM for Cdk5/p35).<br />

Aloisine, RP 06 128135 {7-n-Butyl-6-(4-methoxyphenyl)[5H]pyrrolo[2,3-b]pyrazine; RP106}<br />

A cell-permeable, potent, selective ATP-competitive inhibitor of Cdk /cyclin B<br />

(IC 50 = 700 nM), Cdk5/p25 (IC 50 = .5 mM), and GSK-3 (IC 50 = 920 nM).<br />

Alsterpaullone 126870 {9-Nitro-7,12-dihydroindolo[3,2-d][1]benzazepin-6(5H)-one}<br />

A potent inhibitor of Cdk /cyclin B (IC 50 = 35 nM). Also inhibits the activity of Cdk5/p25dependent<br />

phosphorylation of DARPP-32. One of the most active paullones that acts by<br />

competing with ATP for binding to GSK-3b and inhibits the phosphorylation of tau.<br />

N Alsterpaullone, 2-<br />

Cyanoethyl<br />

More online... www.calbiochem.com/inhibitors/GSK<br />

126871 An Alsterpaullone (Cat. No. 26870) derivative that acts as a highly potent, ATPcompetitive,<br />

and selective inhibitor of Cdk /B and GSK-3b (IC 50 = 230 pM and 800 pM,<br />

respectively; [ATP] = 5 mM). Displays ~37-fold greater selectivity over Cdk5/p25 (IC 50 =<br />

30 nM). Shown to inhibit other kinases in a commercially available testing screen panel<br />

(pIC 50 = -logIC 50 [M]; pIC 50 ~7.5, 7.0, 7.0, 6.5, 6.5, 6.0, and 6.0 for Cdk2/A, Cdk4/D ,<br />

GSK-3b, PDGFRb, Src, VEGFR-2, and VEGFR-3, respectively; [ATP] = mM).<br />

N -Azakenpaullone 191500 A Kenpaullone (Cat. No. 422000) analog that acts as a potent and ATP-competitive<br />

inhibitor of GSK-3b (IC 50 = 8 nM), and displays ~ 00-200 fold greater selectivity<br />

over Cdk /B and Cdk5/p25 (IC 50 = 2.0 mM and 4.2 mM, respectively).<br />

N Cdk /2 <strong>Inhibitor</strong> III 217714 A cell-permeable triazolo-diamine compound that acts as a highly potent ATPcompetitive<br />

inhibitor of Cdk /B and Cdk2/A (IC 50 = 600 pM and 500 pM) with selectivity<br />

over VEGF-R2 and GSK-3b (IC 50 = 32 nM and 40 nM). Only minimally affects a panel of<br />

kinases tested (IC 50 = .0 mM, .6 mM, 2.8 mM, 5.2 mM, 8.9 mM, > 0 mM and<br />

> 00 mM for ERK-2, PDGF-Rb, CKI, PKA, CaMKII, EGF-R or insulin kinase-b, and CKII,<br />

respectively).<br />

5 mg $90<br />

5 mg $73<br />

mg $83<br />

mg $ 39<br />

mg $98<br />

mg $88<br />

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9


Phosphorylation/Dephosphorylation<br />

Glycogen Synthase Kinase <strong>Inhibitor</strong>s, continued<br />

Product Cat. No. Comments Size Price<br />

Cdk /5 <strong>Inhibitor</strong> 217720 (3-Amino-1H-pyrazolo[3,4-b]quinoxaline)<br />

A pyrazoloquinoxaline compound that effectively inhibits Cdk /B, Cdk 5/p25, and<br />

GSK-3b (IC 50 = 0.6 mM, 0.4 mM, and mM respectively).<br />

GSK-3b <strong>Inhibitor</strong> I 361540 (TDZD-8; 4-Benzyl-2-methyl-1,2,4-thiadiazolidine-3,5-dione)<br />

A thiadiazolidinone (TDZD) analog that acts as a highly selective, non-ATP competitive<br />

inhibitor of GSK-3b (IC 50 = 2 mM). Proposed to bind to the active site of GSK-3b.<br />

GSK-3b <strong>Inhibitor</strong> II 361541 {Glycogen Synthase Kinase-3b <strong>Inhibitor</strong> II; 2-Thio(3-iodobenzyl)-5-(1-pyridyl)-<br />

[1,3,4]-oxadiazole}<br />

A 2-thio-[ ,3,4]-oxadiazole-pyridyl derivative that acts as a potent inhibitor of GSK-3b<br />

(IC 50 = 390 nM).<br />

GSK-3b <strong>Inhibitor</strong> III 361542 (2,4-Dibenzyl-5-oxothiadiazolidine-3-thione; OTDZT)<br />

An oxothiadiazolidine-3-thione analog that acts as a non-ATP competitive inhibitor of<br />

GSK-3b (IC 50 = 0 mM).<br />

N GSK-3b <strong>Inhibitor</strong> VI 361547 [2-Chloro-1-(4,5-dibromo-thiophen-2-yl)-ethanone]<br />

A thienyl a-chloromethyl ketone compound that acts as a cell-permeable, irreversible,<br />

and non-ATP competitive inhibitor of GSK-3b (IC 50 = mM). This reactive alkylating<br />

agent is selective towards GSK-3b and does not affect PKA activity even at<br />

concentrations as high as 00 mM.<br />

GSK-3b <strong>Inhibitor</strong> VII 361548 (a-4-Dibromoacetophenone; Tau Protein Kinase I <strong>Inhibitor</strong>; TPK I <strong>Inhibitor</strong>)<br />

A cell-permeable, selective, irreversible, and non-ATP competitive inhibitor of GSK-3b<br />

(IC 50 = 500 nM).<br />

GSK-3b <strong>Inhibitor</strong> VIII 361549 [AR-A014418; N-(4-Methoxybenzyl)-N´-(5-nitro-1,3-thiazol-2-yl)urea]<br />

A cell-permeable, potent, and highly specific inhibitor of glycogen synthase kinase-3b<br />

(GSK-3b) (IC 50 = 04 nM). Inhibition is competitive with respect to ATP (K i = 38 nM).<br />

N InSolution GSK-3b<br />

<strong>Inhibitor</strong> VIII<br />

5 mg $ 8<br />

5 mg $83<br />

5 mg $89<br />

mg $62<br />

5 mg $95<br />

5 mg $84<br />

5 mg $84<br />

361557 A 25 mM (5 mg/649 ml) solution of GSK-3b <strong>Inhibitor</strong> VIII (Cat. No. 36 549) in DMSO. 5 mg $84<br />

GSK-3 <strong>Inhibitor</strong> IX 361550 [BIO; (2´Z,3´E)-6-Bromoindirubin-3´-oxime]<br />

A cell-permeable, highly potent, selective, reversible, and ATP-competitive<br />

inhibitor of GSK-3a/b (IC 50 = 5 nM). At higher concentrations, inhibits Cdk2/cyclin A<br />

(IC 50 = 300 nM) and Cdk5/p25 (IC 50 = 83 nM).<br />

N InSolution GSK-3<br />

<strong>Inhibitor</strong> IX<br />

mg $95<br />

361552 A 0 mM (500 mg/ 40 ml) solution of GSK-3 <strong>Inhibitor</strong> IX (Cat. No. 36 550) in DMSO. 500 mg $63<br />

N GSK-3 <strong>Inhibitor</strong> X 361551 [BIO-Acetoxime; (2´Z,3´E)-6-Bromoindirubin-3´-acetoxime]<br />

An acetoxime analog of BIO (GSK-3 <strong>Inhibitor</strong> IX, Cat. No. 36 550) that exhibits greater<br />

selectivity for GSK-3a/b (IC 50 = 0 nM) over Cdk5/p25, Cdk2/A, and Cdk /B<br />

(IC 50 = 2.4 mM, 4.3 mM, and 63 mM, respectively).<br />

N GSK-3b <strong>Inhibitor</strong> XI 361553 {3-(1-(3-Hydroxypropyl)-1H-pyrrolo[2,3-b]pyridin-3-yl]-4-pyrazin-2-yl-pyrrole-2,<br />

5-dione}<br />

N GSK-3b <strong>Inhibitor</strong> XII,<br />

TWS 9<br />

A cell-permeable azaindolylmaleimide compound that acts as a potent, specific, and<br />

ATP-competitive inhibitor of GSK-3b (K i = 25 nM) and minimally inhibits a panel of 79<br />

commonly studied protein kinases, including several PKC isozymes. Shown to increase<br />

intracellular glycogen synthase activity in HEK293 cells with an EC 50 of 32 nM and<br />

demonstrate metabolic stability in human liver microsomes (HLM; t /2 > 00 min).<br />

361554 (Neurogenesis Inducer, TWS119)<br />

A cell-permeable pyrrolopyrimidine compound that acts as a potent and selective<br />

inhibitor of GSK-3b (IC 50 = 30 nM). Binds to GSK-3b with high-affinity (K d = 26 nM)<br />

and increases the level of b-catenin, a downstream substrate of GSK-3b in the Wnt<br />

signaling pathway.<br />

N GSK-3 <strong>Inhibitor</strong> XIII 361555 [(5-Methyl-1H-pyrazol-3-yl)-(2-phenylquinazolin-4-yl)amine]<br />

An aminopyrazole compound that acts as a potent and ATP-binding site inhibitor<br />

of GSK-3 with a K i of 24 nM.<br />

N GSK-3 <strong>Inhibitor</strong> XIV,<br />

Control, MeBIO<br />

361556 (1-Methyl-BIO)<br />

A cell-permeable N-methylated analog of GSK-3 <strong>Inhibitor</strong> IX, BIO (Cat. No. 36 550)<br />

that serves as a relevant kinase inactive control (IC 50 > 92 mM for Cdk /B, and > 00 mM<br />

for Cdk5/p25 and GSK-3a/b).<br />

mg $95<br />

mg $ 32<br />

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mg<br />

5 mg<br />

mg<br />

5 mg<br />

$90<br />

$278<br />

$67<br />

$20<br />

mg $93


Glycogen Synthase Kinase <strong>Inhibitor</strong>s, continued<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Phosphorylation/Dephosphorylation<br />

Product Cat. No. Comments Size Price<br />

GSK-3b Peptide<br />

<strong>Inhibitor</strong><br />

GSK-3b Peptide<br />

<strong>Inhibitor</strong>, Cellpermeable<br />

Hymenialdisine, Stylissa<br />

damicornis<br />

361545 (H-KEAPPAPPQSpP-NH 2 ; L803)<br />

A phosphorylated peptide that acts as a substrate-specific, competitive inhibitor of<br />

GSK-3b (IC 50 = 50 mM). Inhibits Cdc2, CK II, MAPK, PKA, PKB, and PKC d at higher<br />

concentrations (200 mM results in 85– 00% inhibition).<br />

361546 (L803-mts; Myr-N-GKEAPPAPPQSZP-NH 2 )<br />

A cell-permeable, myristoylated form of GSK-3b Peptide <strong>Inhibitor</strong> (Cat. No. 36 545)<br />

with a glycine spacer. Acts as a selective, substrate-specific, competitive inhibitor of<br />

GSK-3b (IC 50 = 40 mM). Does not affect the activities of Cdc2, PKB, or PKC.<br />

400085 {4-(2-Amino-4-oxo-2-imidazolidin-5-ylidene)-2-bromo-4,5,6,7-tetrahydropyrrolo<br />

[2,3-c]azepin-8-one; HD; 10Z-Hymenialdisine}<br />

A potent, ATP-competitive inhibitor of GSK-3b (IC 50 = 0 nM). Also inhibits several other<br />

protein kinases, including MEK- (IC 50 = 6 nM), Cdks (IC 50 = 22 nM for Cdk /cyclin B,<br />

40 nM for Cdk2/cyclin E, and 28 nM for Cdk5/p35), and casein kinase (IC 50 = 35 nM).<br />

Indirubin-3´-monoxime 402085 A potent cell-permeable inhibitor of GSK-3b (IC 50 = 90 nM) and cyclin-dependent<br />

kinases (IC 50 = 80 nM for Cdk ).<br />

Indirubin-3´-monoxime,<br />

5-Iodo-<br />

Indirubin-3´monoxime-5-sulphonic<br />

Acid<br />

402086 A highly potent, cell-permeable inhibitor of GSK-3b (IC 50 = 9 nM). Reported to inhibit<br />

GSK-3b phosphorylation of human tau protein in vitro (IC 50 ~ 00 nM) and in cells (effective<br />

concentration = 20 mM). Also inhibits Cdk (IC 50 = 25 nM) and Cdk5 (IC 50 = 20 nM).<br />

402088 A highly potent, selective, and ATP competitive inhibitor of Cdks and 5 (IC 50 = 5 nM for<br />

Cdk ; IC 50 = 7 nM for Cdk5). Also acts as a potent inhibitor of GSK-3b (IC 50 = 80 nM).<br />

ICG 371957 A cell-permeable alkaloid-containing indole/maleimide/imidazole skeleton that acts<br />

as a potent and ATP-competitive inhibitor of Chk (IC 50 = 00 nM) and GSK-3b (IC 50 =<br />

500 nM). Inhibits G 2 DNA damage checkpoint-associated kinases, Chk2, Cdk , and DNA-<br />

PK only at much higher concentrations (IC 50 = 3 µM, 0 µM, and 0 µM, respectively).<br />

Kenpaullone 422000 {9-Bromo-7,12-dihydroindolo[3,2-d][1]benzazepin-6(5H)-one; NSC-664704}<br />

A potent, cell-permeable, ATP-competitive inhibitor of GSK-3b (IC 50 = 230 nM),<br />

Lck (IC 50 = 470 nM) and Cdks. Inhibits Cdk /cyclin B (IC 50 = 400 nM), CdK2/cyclin A<br />

(IC 50 = 680 nM), Cdk2/cyclin E (IC 50 = 7.5 mM), and Cdk5/p25 (IC 50 = 850 nM).<br />

Ro-3 -8220 557520 {3-[1-[3-(Amidinothio)propyl-1H-indol-3-yl]-3-(1-methyl-1H-indol-3-yl)maleimide;<br />

Bisindolylmaleimide IX, Methanesulfonate}<br />

A potent, cell-permeable inhibitor of GSK-3. Inhibits GSK-3 in primary adipocytes<br />

(IC 50 = 6.8 nM and in GSK-3b immunoprecipitates (IC 50 = 2.8 nM). Also acts as a<br />

competitive and selective inhibitor of CaM kinase II (IC 50 = 7 mM) and protein kinase A<br />

(IC 50 = 900 nM).<br />

mg $90<br />

mg $ 24<br />

500 mg $207<br />

mg $ 0<br />

mg $99<br />

mg $99<br />

mg $ 39<br />

mg $85<br />

500 mg $83<br />

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products and to request your free<br />

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2


Phosphorylation/Dephosphorylation<br />

c-Jun N-Terminal Kinase (JNK/SAP Kinase) <strong>Inhibitor</strong>s<br />

Jun N-terminal kinase (JNK), a serine-directed protein<br />

kinase, is involved in the phosphorylation and activation<br />

of c-Jun and ATF2 and plays a significant role in<br />

metabolism, growth, cell differentiation, apoptosis, and<br />

participates in stress responses, such as those induced<br />

by hypoxin, cold shock, and hyperosmolarity. The<br />

three isoforms of JNK, known as JNK1, 2, and 3, are<br />

encoded by 3, independent genes. They phosphorylate<br />

Ser 63 and Ser 73 at the region of c-Jun and enhance its<br />

c-Jun N-Terminal Kinase (JNK/SAP Kinase) <strong>Inhibitor</strong>s<br />

transcriptional activity. JNK1 and 2 exhibit broad tissue<br />

expression profiles. In contrast, JNK3 is expressed<br />

predominantly in the central nervous system. JNK is<br />

activated in response to inflammation, endotoxins, and<br />

environmental stress. Its activation can mediate proinflammatory<br />

gene expression, cell proliferation and<br />

apoptosis.<br />

Product Cat. No. Comments Size Price<br />

Dicoumarol 287897 [Bishydroxycoumarin; Dicumarol; 3,3´-Methylenebis(4-hydroxycoumarin)]<br />

A quinone reductase inhibitor that competes with NADH or NADPH for binding to the<br />

oxidized form of NAD(P)H:quinone oxidoreductase (NQO ). Shown to inhibit IGF-I-,<br />

menadione-, and DMNQ-mediated activation of stress-activated protein kinase/SAPK/<br />

JNK and subsequent phosphorylation of c-Jun, as well as stress-induced activation of<br />

SAPK/JNK. Does not affect the phosphorylation of p38 or Akt (protein kinase B).<br />

JNK <strong>Inhibitor</strong> I, (L)-<br />

Form, Cell-Permeable<br />

JNK <strong>Inhibitor</strong> I, (L)-<br />

Form, Cell-Permeable,<br />

Negative Control<br />

420116 [(L)-HIV-TAT 48-57 -PP-JBD 20 ; (L)-JNKI1; c-Jun NH 2 -terminal kinase; H-<br />

GRKKRRQRRRPPRPKRPTTLNLFPQVPRSQDT-NH 2 ; SAPK <strong>Inhibitor</strong> I]<br />

A cell-permeable, biologically active peptide consisting of a carboxyl-terminal sequence<br />

derived from the JNK-binding domain (JBD) and an amino-terminal peptide containing<br />

the HIV-TAT 48-57 sequence that imparts cell-permeability. Blocks the activation domain<br />

of JNK and prevents the activation of c-Jun (IC 50 ~ mM). Inhibits IL- b-induced c-Jun<br />

and c-fos expression in insulin secreting bTC-3 cells and offers protection against<br />

apoptosis. Does not affect the activities of ERK , ERK2, or p38 in any significant manner.<br />

420118 [(L)-HIV-TAT 48-57 -PP; GRKKRRQRRRPP-NH 2 ]<br />

A highly cell-permeable carrier decapeptide derived from HIV-TAT 48-57 sequence that<br />

is modified with two proline residues. Serves as a useful negative control for studies<br />

involving JNK <strong>Inhibitor</strong> I, (L)-Form, Cell-Permeable (Cat. No. 420 6).<br />

JNK <strong>Inhibitor</strong> II 420119 {Anthra[1,9-cd]pyrazol-6(2H)-one; 1,9-pyrazoloanthrone; SAPK <strong>Inhibitor</strong> II; SP600125}<br />

A potent, cell-permeable, selective, and reversible inhibitor of JNK (IC 50 = 40 nM for<br />

JNK- and JNK-2 and 90 nM for JNK-3). The inhibition is competitive with respect to<br />

ATP. Exhibits over 300-fold greater selectivity for JNK as compared to ERK and p38b<br />

MAP kinases.<br />

N InSolution JNK<br />

<strong>Inhibitor</strong> II<br />

JNK <strong>Inhibitor</strong> II,<br />

Negative Control<br />

JNK <strong>Inhibitor</strong> III,<br />

Cell-Permeable<br />

More online... www.calbiochem.com/inhibitors/JNK<br />

500 mg $50<br />

mg $2 4<br />

mg $ 06<br />

5 mg $64<br />

420128 A 50 mM (5 mg/454 ml) solution of JNK <strong>Inhibitor</strong> II (Cat. No. 420 9) in DMSO. 5 mg $64<br />

420123 (N 1 -Methyl-1,9-pyrazoloanthrone)<br />

A useful negative control for JNK <strong>Inhibitor</strong> II (SP600 25, Cat. No. 420 9). Inhibits JNK2<br />

and JNK3 only at much higher concentrations (IC 50 = 8 mM and 24 mM, respectively)<br />

compared to JNK <strong>Inhibitor</strong> II (IC 50 = 40 and 90 nM, respectively).<br />

420130 (Ac-YGRKKRRQRRR-gaba-ILKQSMTLNLADPVGSLKPHLRAKN-NH 2 ; HIV-TAT 47-57 -gaba-c-<br />

Jund 33-57 ; SAPK <strong>Inhibitor</strong> III)<br />

A cell-permeable peptide constructed by fusing the JNK binding domain sequence (d)<br />

(amino acids 33–57) of human c-Jun to the HIV-TAT transduction domain sequence<br />

(amino acids 47–57) with a g-aminobutyric acid (GABA) spacer. Disrupts c-Jun/JNK<br />

complex formation and subsequent phosphorylation and activation of c-Jun by JNK<br />

in vitro and in intact cells. Mode of inhibition is distinct from that of JNK <strong>Inhibitor</strong> II<br />

(SP600 25; Cat. No. 420 9).<br />

mg $57<br />

mg $ 73<br />

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c-Jun N-Terminal Kinase (JNK/SAP Kinase) <strong>Inhibitor</strong>s, continued<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Call us or visit<br />

our website<br />

Phosphorylation/Dephosphorylation<br />

Product Cat. No. Comments Size Price<br />

JNK <strong>Inhibitor</strong> III,<br />

Cell-Permeable,<br />

Negative Control<br />

420131 (Ac-YGRKKRRQRRR-gaba-DSNLIRGVLPTLMPKSLAQNKLKHA-NH 2 ; HIV-TAT 47-57 -gaba-c-<br />

Jund 33-57 , scrambled)<br />

A cell-permeable peptide that contains a scrambled sequence derived from the JNK<br />

binding domain (d) of human c-Jun (amino acids 33–57) fused to the HIV-TAT transduction<br />

domain (amino acids 47–57) via a g-aminobutyric acid (GABA) spacer. Does not<br />

disrupt c-Jun/JNK complex formation. Serves as a negative control for JNK <strong>Inhibitor</strong> III,<br />

Cell-Permeable (Cat. No. 420 30).<br />

N JNK <strong>Inhibitor</strong> V 420129 A cell-permeable pyrimidinyl compound that acts as a potent, selective, and ATPcompetitive<br />

inhibitor of c-Jun N-terminal kinase (IC 50 = 50, 220, and 70 nM for<br />

hJNK , hJNK2, and hJNK3, respectively; 20 nM for rat JNK3) with 0– 00-fold greater<br />

selectivity over a panel of commonly studied kinases (IC 50 in the range of –5 mM for<br />

c-Src, c-Raf, Cdk2/A, and p38a; 5– 0 mM for MKK6, RSK-2, ROCKII, Blk, MSK , and SGK;<br />

> 0 mM for Erk , MEK , PDK , Akt, IKKb, and Chk ).<br />

NPPB 484100 5-Nitro-2-(3-phenylpropylamino)benzoic Acid<br />

Blocks phosphorylation and activation of ERK /2 and JNK/SAPK, but not p38.<br />

Protein Kinase <strong>Inhibitor</strong>,<br />

DMAP<br />

IP3 Kinase <strong>Inhibitor</strong><br />

476493 (N 6 ,N 6 -Dimethyladenine; 6-Dimethylaminopurine; 6 DMAP)<br />

A puromycin analog that acts as a protein kinase inhibitor. Reported to inhibit a number<br />

of TNF-a-induced effects, including CAP kinase activation, JNK activity, and suppression<br />

of Jun-B expression. DMAP treatment of Xenopus eggs initiates rapid DNA<br />

synthesis.<br />

mg $ 73<br />

5 mg $ 44<br />

0 mg $62<br />

50 mg $48<br />

Product Cat. No. Comments Size Price<br />

IP3K <strong>Inhibitor</strong> 406170 A cell-permeable, selective, ATP-competitive inhibitor of IP 3-K (IC 50 = 0.2 µM),<br />

the kinase that catalyzes the conversion of IP3 (Cat. Nos. 407 23 and 407 37)<br />

to IP4 (Cat. No. 407 26). Induces elevated cellular IP3 level and Ca 2+ -release in a<br />

dose-dependent manner (5–20 mM in HL60 cells).<br />

5 mg $ 8<br />

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23


Phosphorylation/Dephosphorylation<br />

Mitogen-Activated Protein (MAP) Kinase <strong>Inhibitor</strong>s<br />

The mitogen-activated protein (MAP) kinases are a group<br />

of evolutionarily conserved protein serine/threonine<br />

kinases that are activated in response to a variety of<br />

extracellular stimuli and mediate signal transduction<br />

from the cell surface to the nucleus. They regulate several<br />

physiological and pathological cellular phenomena,<br />

including inflammation, apoptotic cell death, oncogenic<br />

transformation, tumor cell invasion, and metastasis. MAP<br />

kinases, in combination with several other signaling<br />

pathways, can differentially alter the phosphorylation<br />

status of transcription factors in a pattern unique to<br />

a given external signal. Although MAP kinases are<br />

expressed in all cell types, they regulate very specific<br />

biological responses that differ from cell type to cell type.<br />

Four major types of MAP kinase cascades have been<br />

reported in mammalian cells that respond synergistically<br />

to different upstream signals. MAP kinases are part<br />

of a three-tiered phospho-relay cascade consisting of<br />

MAP kinase, a MAP kinase kinase (MEK) and a MAP<br />

kinase kinase kinase (MEKK). Controlled regulation<br />

of these cascades is involved in cell proliferation and<br />

differentiation, whereas unregulated activation of<br />

these MAP kinases can result in oncogenesis. The most<br />

widely studied cascade is that of ERK1/ERK2 MAP<br />

kinases. In the cell, one highly active form of ERK1 or<br />

ERK2 (dual phosphorylated) exists, which exhibits over<br />

1000-fold greater activity than the unphosphorylated<br />

form. At any one time, there may be three low activity<br />

forms of ERKs: one unphosphorylated enzyme, and two<br />

singly phosphorylated forms that contain<br />

phosphate either at a tyrosine or a<br />

threonine residue.<br />

The JNK/SAPK cascade is<br />

activated following exposure<br />

to UV radiation,<br />

heat shock, or<br />

inflammatory<br />

cytokines. The<br />

activation of these<br />

MAP kinases is<br />

mediated by Rac<br />

and cdc42, two<br />

small G-proteins.<br />

Activated cdc42<br />

binds to PAK protein<br />

kinase and activates<br />

it. Activated PAK 65 can<br />

activate MEKK, which in turn phosphorylates SEK/JNKK<br />

and activates it. The active SEK/JNKK phosphorylates<br />

JNK/SAPK (at the TPY motif). The sites of activating<br />

phosphorylation are conserved between ERK and JNK,<br />

however, these sites are located within distinct dual<br />

specificity phosphorylation motifs (TPY for JNK and<br />

TEY for ERK).<br />

The p38 kinase, another member of the MAP kinase<br />

family, bears similarity to the yeast MAPK, Hog-1. It<br />

is activated in response to inflammatory cytokines,<br />

endotoxins, and osmotic stress. It shares about 50%<br />

homology with the ERKs. The upstream steps in its<br />

activation of this cascade are not well defined. However,<br />

downstream activation of p38 occurs following its<br />

phosphorylation (at the TGY motif) by MKK3, a dual<br />

specificity kinase. Following its activation, p38<br />

translocates to the nucleus and phosphoryates ATF-2.<br />

Another known target of p38 is MAPKAPK2 that is<br />

involved in the phosphorylation and activation of heatshock<br />

proteins.<br />

The fourth and least studied mammalian MAP kinase<br />

pathway is big MAP kinase 1 (BMK1), also known as<br />

extracellular signal regulated kinase 5 (ERK5). BMK1<br />

is activated in response to growth factors and stress.<br />

Activation of the BMK1 signaling pathway has not<br />

only been implicated in normal cell survival, cell<br />

proliferation, cell differentiation, but also in<br />

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Mitogen-Activated Protein (MAP) Kinase <strong>Inhibitor</strong>s, continued<br />

pathological states such as carcinogenesis, cardiac<br />

hypertrophy, and atherosclerosis. BMK1 can be activated<br />

following exposure EGF, BDNF, NGF, VEGF, FGF-2,<br />

phorbol esters, and oxidative stress. The signaling<br />

molecules in the ERK5 cascade include MEKK2/3, MEK5,<br />

and ERK5. Since BMK1 is the only known substrate of<br />

MEK5, all effects of MEK5 have been attributed to its<br />

ability to activate BMK1. Thus far, myocyte enhancer<br />

factor 2 (MEF-2), Ets-domain transcription factor (Sap1a),<br />

Bad, and serum- and glucocorticoid-inducible kinase<br />

(SGK) have been identified as substrates for BMK1.<br />

Although different MAP kinase cascades show a high<br />

degree of specificity and functional separation, some<br />

degree of cross-talk is observed between different<br />

pathways. Another important observation is that when<br />

mammalian cells are treated with mitogenic agents,<br />

ERKs are significantly activated whereas JNK/SAPK are<br />

not affected. Conversely, cells exposed to stress activate<br />

the JNK/SAPK pathway without altering the activity of<br />

MAP Kinase <strong>Inhibitor</strong>s<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Phosphorylation/Dephosphorylation<br />

ERKs. At the transcription level, even though ATF-2 is<br />

phosphorylated and activated by all three MAP kinases,<br />

and c-Jun and Elk-1 are phosphorylated by ERKs and<br />

JNK/SAPK, all these pathways result in transcriptional<br />

activity that is unique for a particular external stress.<br />

References:<br />

Wong, C. H., et al. 2005. Dev. Biol. 286, .<br />

Johnson, G.L. et al. 2005. Curr. Opin. Chem. Biol. 9, 325.<br />

Hayashi, M., and Lee, J.D. 2004. J. Mol. Med. 82, 800.<br />

Murry, J. A., 2003. Curr. Opin. Drug. Discov. Develop. 6, 945.<br />

Burack, W.R., and Sturgill, T.W. 997. Biochemistry 36, 5929.<br />

Sivaraman, V.S., et al. 997. J. Clin. Invest. 99, 478.<br />

Tong, L., et al. 997. Nat. Struct. Biol. 4, 3 .<br />

Su, B., and Karin, M. 996. Curr. Opin. Immunol. 8, 402.<br />

Cheng, M., et al. 996. J. Biol. Chem. 271, 895 .<br />

Das, R., and Vonderhaar, B.K. 996. Breast Cancer Res. Treat. 40, 4 .<br />

Davis, R.J., 994. Trends Biochem. Sci. 19, 470.<br />

Product Cat. No. Comments Size Price<br />

AG 26 658452 [a-Cyano-(3-hydroxy-4-nitro)cinnamonitrile]<br />

An inhibitor of lipopolysaccaride (LPS)-induced synthesis of tumor necrosis factor-a<br />

and nitric oxide in murine peritoneal macrophages. Blocks LPS-induced tyrosine<br />

phosphorylation of a p42 MAPK /ERK2 protein substrate.<br />

Anthrax Lethal Factor,<br />

Recombinant, Bacillus<br />

anthracis<br />

ERK Activation <strong>Inhibitor</strong><br />

Peptide I, Cell-<br />

Permeable<br />

ERK Activation <strong>Inhibitor</strong><br />

Peptide II, Cell-<br />

Permeable<br />

More online... www.calbiochem.com/inhibitors/MAPK<br />

176900 One of the three protein components of Anthrax toxin, lethal factor (LF) is a highly<br />

specific protease that cleaves members of the mitogen-activated protein kinase kinase<br />

(MAPKK) family. LF is comprised of four domains. Domain I binds the protective antigen<br />

to enter the target cell; domains II, III, and IV create a long groove to hold and cleave the<br />

MAPKK proteins.<br />

328000 (Ste-MEK1 13 ; Ste-MPKKKPTPIQLNP-NH 2 )<br />

A stearated 3-amino acid peptide corresponding to the N-terminus of MEK . Acts as a<br />

specific inhibitor of ERK activation and the transcriptional activity of Elk . Selectively binds<br />

to ERK2 and prevents its interaction with MEK (IC 50 = 2.5 mM).<br />

328005 (H-GYGRKKRRQRRR-G-MPKKKPTPIQLNP-NH 2 ; MTP TAT -G-MEK1 13 )<br />

A 3-amino acid peptide corresponding to the N-terminus of MEK that is fused to the<br />

HIV-TAT membrane translocating peptide (MTP) sequence via a glycine linker. Acts as a<br />

specific inhibitor of ERK activation and the transcriptional activity of Elk by binding to<br />

ERK2, and prevents its interaction with MEK (IC 50 = 2 0 nM).<br />

N ERK <strong>Inhibitor</strong> 328006 A cell-permeable thiazolidinedione compound with anti-proliferative properties<br />

(IC 50 ≤ 25 mM in HeLa, A549, and SUM- 59 tumor cells). Preferentially binds to ERK2 with<br />

a K d of ~5 mM and prevents its interaction with protein substrates. Shown to block ERKmediated<br />

phosphorylation of ribosomal S6 kinase- (Rsk- ) and ternary complex factor Elk- ,<br />

with little effect on ERK /2 phosphorylation by its upstream activator MEK /2.<br />

Hsp25 Kinase <strong>Inhibitor</strong> 385880 (KKKALNRQLGVAA; MAPKAP Kinase-2 <strong>Inhibitor</strong>; MK2 <strong>Inhibitor</strong>)<br />

A potent and selective inhibitor of mammalian heat-shock protein (Hsp25) kinase (mitogenactivated<br />

protein kinase-activated protein kinase-2 (MAPKAP kinase-2). Inhibition is<br />

competitive with respect to the substrate peptide (K i = 8. mM) and non-competitive<br />

with respect to ATP (K i = 34 mM).<br />

5 mg $97<br />

00 mg $232<br />

mg $ 30<br />

mg $ 73<br />

5 mg $88<br />

mg $90<br />

Technical Support<br />

Phone 800 628 8470<br />

E-mail calbiochem@emdbiosciences.com<br />

25


Phosphorylation/Dephosphorylation<br />

MAP Kinase <strong>Inhibitor</strong>s, continued<br />

Product Cat. No. Comments Size Price<br />

Hymenialdisine, Stylissa<br />

damicornis<br />

400085 {4-(2-Amino-4-oxo-2-imidazolidin-5-ylidene)-2-bromo-4,5,6,7-tetrahydropyrrolo<br />

[2,3-c]azepin-8-one; HD; 10Z-Hymenialdisine}<br />

A potent, ATP-competitive inhibitor of GSK-3b (IC 50 = 0 nM). Also inhibits several other<br />

protein kinases, including MEK- (IC 50 = 6 nM), Cdks (IC 50 = 22 nM for Cdk /cyclin B,<br />

40 nM for Cdk2/cyclin E, and 28 nM for Cdk5/p35), and casein kinase (IC 50 = 35 nM).<br />

5-Iodotubercidin 407900 {4-Amino-5-iodo-7-(b-D-ribofuranosyl)pyrrolo[2,3-d]pyrimidine; ITU}<br />

A potent inhibitor of adenosine kinase (K i = 30 nM) and Ser/Thr-specific kinases that also<br />

acts as a potent, and competitive inhibitor of ERK2 (K i = 530 nM).<br />

N MEK <strong>Inhibitor</strong> I 444937 A cell-permeable pyridine-containing vinylogous cyanamide compound that acts<br />

as a potent and selective inhibitor of MEK (IC 50 = 2 nM) with little activity towards<br />

MKK3 and MKK4 (IC 50 > mM). The inhibition is noncompetitive with respect to ERK<br />

and the compound displays significant affinity only towards ATP-bound MEK<br />

(i.e., noncompetitive with respect to ATP). Exhibits superior potency, solubility, and<br />

stability compared to U0 26 (Cat. No. 662005) in aqueous solutions.<br />

MEK /2 <strong>Inhibitor</strong> 444939 [Z-& E-a-(Amino-((4-aminophenyl)thio)methylene)-2-(trifluoromethyl)<br />

benzeneacetonitrile; SL327]<br />

A cell-permeable, selective inhibitor of MEK (IC = 80 nM) and MEK2 (IC = 220 nM).<br />

50 50<br />

Inhibits ERK , MKK3/p38, MKK4, JNK, and PKC activities only at higher concentrations<br />

(IC > 0 mM).<br />

50<br />

MEK <strong>Inhibitor</strong> II 444938 [2-Chloro-3-(N-succinimidyl)-1,4-naphthoquinone]<br />

A cell-permeable, potent, and selective inhibitor of MEK (IC 50 = 380 nM for MEK ).<br />

N MK2a <strong>Inhibitor</strong> 475863 [CMPD1; 4-(2´-Fluorobiphenyl-4-yl)-N-(4-hydroxyphenyl)-butyramide; Mitogen-activated<br />

protein kinase-activated protein kinase 2a <strong>Inhibitor</strong>]<br />

A p-amidophenolic compound that selectively inhibits the phosphorylation of MK2a<br />

app (mitogen-activated protein kinase-activated protein kinase 2a; K = 330 nM) by p38a<br />

i<br />

in a non-ATP-competitive manner. Does not block the kinase activity of p38a towards<br />

the other two known p38 substrates, MBP and ATF-2.<br />

InSolution ML 3 63 475800 {4-[5-(4-Fluorophenyl)-2-(4-methanesulfinyl-benzylsulfanyl)-3H-imidazol-4-yl]pyridine}<br />

Supplied as a 0 mM ( mg/236 ml) solution in DMSO. A cell-permeable inhibitor that<br />

combines the structural features of cytokine release inhibitors SKF-86002 (Cat. No.<br />

567305) and p38 MAP kinase inhibitor SB 203580 (Cat. No. 559389). Occupies the ATP<br />

binding site of p38 MAP kinase and inhibits its activity (IC 50 = 4.0 mM).<br />

p38 MAP Kinase<br />

<strong>Inhibitor</strong><br />

p38 MAP Kinase<br />

<strong>Inhibitor</strong> III<br />

N InSolution p38 MAP<br />

Kinase <strong>Inhibitor</strong> III<br />

506126 [2-(4-Chlorophenyl)-4-(4-fluorophenyl)-5-pyridin-4-yl-1,2-dihydropyrazol-3-one]<br />

A potent p38 MAP kinase inhibitor (IC 50 = 35 nM).<br />

506121 {(RS)-{4-[5-(4-Fluorophenyl)-2-methylsulfanyl-3H-imidazol-4-yl]pyridin-2-yl}-<br />

(1-phenylethyl)amine]; ML3403}<br />

A cell-permeable, potent, selective, and ATP-competitive inhibitor of p38 MAP kinase<br />

(IC = 380 nM for p38a).<br />

50<br />

506148 A 0 mM ( mg/247 ml) solution of p38 MAP Kinase <strong>Inhibitor</strong> III (Cat. No. 506 2 )<br />

in DMSO.<br />

NPPB 484100 5-Nitro-2-(3-phenylpropylamino)benzoic Acid<br />

Blocks phosphorylation and activation of ERK /2 and JNK/SAPK, but not p38.<br />

PD 98059 513000 (2´-Amino-3´-methoxyflavone)<br />

A potent and selective MEK inhibitor. It selectively blocks the activation of MEK,<br />

thus preventing its phosphorylation by c-Raf or MEK kinase (IC 50 = 2–7 mM).<br />

PD 693 6 513030 [4-(4-Fluorophenyl)-2-(4-nitrophenyl)-5-(4-pyridyl)-1H-imidazole]<br />

A potent and selective p38 MAP kinase inhibitor (IC 50 = 89 nM).<br />

SB 202 90 559388 [FHPI; 4-(4-Fluorophenyl)-2-(4-hydroxyphenyl)-5-(4-pyridyl)1H-imidazole]<br />

A potent, selective, and cell-permeable p38 MAP kinase inhibitor (IC 50 = 50 nM for<br />

SAPK2a/p38 and 00 nM for SAPK2b/p38b2).<br />

500 mg $207<br />

mg $ 5<br />

26 Orders Phone 800 854 34 7<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Fax 800 776 0999<br />

Web www.emdbiosciences.com/calbiochem<br />

mg<br />

5 mg<br />

mg<br />

5 mg<br />

$95<br />

$335<br />

$84<br />

$294<br />

5 mg $79<br />

5 mg $ 63<br />

mg $ 0<br />

500 mg $98<br />

mg $ 2<br />

mg $ 2<br />

0 mg $62<br />

5 mg $88<br />

mg $98<br />

mg $98<br />

InSolution SB 202 90 559397 A mg/ml solution of SB 202 90 (Cat. No. 559388) in anhydrous DMSO. ml $ 04<br />

SB 202 90,<br />

Immobilized<br />

559403 An immobilized form of the p38 MAP kinase inhibitor (Cat. No. 559388) covalently<br />

attached to hydrophilic acrylic beads via a 3-carbon spacer. Useful for affinityprecipitation<br />

of p38 MAP kinase and other functionally related proteins from cell<br />

or tissue extracts.<br />

set $ 32


MAP Kinase <strong>Inhibitor</strong>s, continued<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Phosphorylation/Dephosphorylation<br />

Product Cat. No. Comments Size Price<br />

SB 202474 559387 [4-Ethyl-2(p-methoxyphenyl)-5-(4´-pyridyl)-IH-imidazole]<br />

A negative control for MAP kinase inhibition studies.<br />

SB 202474,<br />

Dihydrochloride<br />

559407 [4-Ethyl-2(p-methoxyphenyl)-5-(4´-pyridyl)-IH-imidazole, DiHCl]<br />

A water-soluble form of SB 202474 (Cat. No. 559387), that serves as a negative control<br />

compound for SB 202 90 (Cat. No. 559388) and SB 203580 (Cat. No. 559389) in p38<br />

MAP kinase inhibition studies.<br />

SB 203580 559389 [4-(4-Fluorophenyl)-2-(4-methylsulfinylphenyl)-5-(4-pyridyl)1H-imidazole]<br />

A potent, selective, and cell-permeable p38 MAP kinase inhibitor (IC 50 = 50 nM for<br />

SAPK2a/p38 and 500 nM for SAPK2b/p38b2).<br />

mg $ 00<br />

mg $ 3<br />

mg $98<br />

InSolution SB 203580 559398 A mg/ml solution of SB 203580 (Cat. No. 559389) in anhydrous DMSO. ml $ 6<br />

SB 203580, Iodo- 559400 [4-(3-Iodophenyl)-2-(4-methylsulfinylphenyl)-5-(4-pyridyl)1H-imidazole]<br />

A highly specific and potent inhibitor of p38 MAP kinase, similar to SB 203580 (Cat. No.<br />

559389). Useful for the identification of inhibitor binding sites of p38 MAP kinase.<br />

SB 203580, Sulfone 559399 [4-(4-Fluorophenyl)-2-(4-methylsulfonylphenyl)-5-(4-pyridyl)-1H-imidazole]<br />

The sulfone analog of SB 203580 (Cat. No. 559389). Potently inhibits p38 MAP kinase<br />

(IC 50 = 30 nM).<br />

SB 220025 559396 [5-(2-Amino-4-pyrimidinyl)-4-(4-fluorophenyl)-1-(4-piperidinlyl)imidazole]<br />

A potent and specific inhibitor of human p38 MAP kinase (IC 50 = 60 nM). Displays 2000-fold<br />

greater selectivity for p38 MAPK over ERK (p42/p44 MAP kinase).<br />

SB 239063 559404 [trans-1-(4-Hydroxycyclohexyl)-4-(4-fluorophenyl)-5-(2-methoxypyrimidin-4-yl)imidazole]<br />

A potent MAP kinase inhibitor (IC 50 = 44 nM for inhibition of recombinant purified<br />

human p38a).<br />

SC-68376 565625 [2-Methyl-4-phenyl-5-(4-pyridyl)oxazole]<br />

A potent and selective inhibitor of p38 MAP kinase (IC 50 = 2–5 mM).<br />

SKF-86002 567305 {6-(4-Fluorophenyl)-2,3-dihydro-5-(4-pyridyl)imidazo[2,1-b]thiazole}<br />

A cytokine-suppressive anti-inflammatory drug (CSAID) that acts as a specific p38 MAP<br />

kinase inhibitor. Also inhibits cyclooxygenase and 5-lipoxygenase.<br />

U0 24 662006 [1,4-Diamino-2,3-dicyano-1,4-bis(methylthio)butadiene]<br />

A useful negative control for MEK inhibitors U0 25 (Cat. No. 662008) and U0 26<br />

(Cat. No. 662005).<br />

U0 25 662008 [1,4-Diamino-2,3-dicyano-1,4-bis(phenylthio)butadiene]<br />

A potent and specific inhibitor of MEK and MEK2. About 0-fold less potent than<br />

U0 26 (Cat. No. 662005).<br />

U0 26 662005 [1,4-Diamino-2,3-dicyano-1,4-bis(2-aminophenylthio)butadiene]<br />

A potent and specific inhibitor of MEK (IC 50 = 72 nM) and MEK2 (IC 50 = 58 nM).<br />

ZM 336372 692000 {N-[5-(3-Dimethylaminobenzamido)-2-methylphenyl]-4-hydroxybenzamide}<br />

A potent, specific and competitive inhibitor of c-Raf (IC 50 = 70 nM) that also inhibits<br />

p38a (IC 50 = 2 mM) and p38b2 (IC 50 = 2 mM).<br />

mg $ 00<br />

mg $98<br />

500 mg $ 45<br />

500 mg $ 06<br />

mg $ 8<br />

5 mg $ 23<br />

mg $68<br />

mg $68<br />

mg $66<br />

mg $ 27<br />

Technical Support<br />

Phone 800 628 8470<br />

E-mail calbiochem@emdbiosciences.com<br />

27


Phosphorylation/Dephosphorylation<br />

MAP Kinase <strong>Inhibitor</strong>s, continued<br />

MAP Kinase Cascade <strong>Inhibitor</strong> Set<br />

Each set contains mg each of FPT <strong>Inhibitor</strong> III (Cat. No. 344 54) and<br />

ZM336372 (Cat. No. 692000), 5 mg of PD 98059 (Cat. No. 5 3000), and<br />

mg of SB 203580 (Cat. No. 559389).<br />

Cat. No. 444185 1 set $289<br />

MAP Kinase <strong>Inhibitor</strong> Set I<br />

Each set contains 5 mg of the MEK inhibitor PD 98059 (Cat. No.<br />

5 3000), mg each of the MAP kinase inhibitors SB 202 90 (Cat. No.<br />

559388) and SB 203580 (Cat. No. 559389), and mg of the negative<br />

control, SB 202474 (Cat. No. 559387).<br />

Cat. No. 444180 1 set $293<br />

MAP Kinase <strong>Inhibitor</strong> Set II<br />

Each set contains 5 mg of PD 98059 (Cat. No. 5 3000), mg each of<br />

SB 203580 (Cat. No. 559389) and U0 26 (Cat. No. 662005), and mg<br />

of the negative control, SB 202474 (Cat. No. 559387).<br />

Cat. No. 444190 1 set $255<br />

MEK <strong>Inhibitor</strong> Set<br />

Each set contains 5 mg of PD 98059 (Cat. No. 5 3000), mg of U0 26<br />

(Cat. No. 662005), and mg of the negative control U0 24 (Cat. No.<br />

662006).<br />

Cat. No. 453710 1 set $180<br />

To view all MAP Kinase research-related products and to request your free<br />

MAP Kinase wall poster, visit our MAP Kinase Interactive Pathways at:<br />

www.calbiochem.com/mapk<br />

28 Orders Phone 800 854 34 7<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Fax 800 776 0999<br />

Web www.emdbiosciences.com/calbiochem


Myosin Light Chain Kinase (MLCK) <strong>Inhibitor</strong>s<br />

Myosin light chain kinase (MLCK), a Ca 2+ -calmodulin<br />

dependent multi-functional enzyme, plays a critical<br />

role in the regulation of smooth muscle contraction and<br />

cellular migration. It regulates the contractile interaction<br />

between actin microfilaments and conventional smooth<br />

muscle and non-muscle myosin II. MLCK is composed of<br />

an N-terminal actin-binding domain, a central kinase<br />

domain, and a C-terminal myosin-binding domain. The<br />

kinase domain activates the interaction of smooth-muscle<br />

myosin with actin by phosphorylating the myosin light<br />

chain. MLCK phosphorylates a specific site on the Nterminus<br />

of the regulatory light chain of myosin II. This<br />

phosphorylation is responsible for coupling increased Ca 2+<br />

concentration with smooth muscle contraction.<br />

In the presence of Ca 2+ , the C-terminal domain of<br />

calmodulin binds to the N-terminus of the calmodulinbinding<br />

sequence of MLCK followed by the binding<br />

Myosin Light Chain Kinase (MLCK) <strong>Inhibitor</strong>s<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Phosphorylation/Dephosphorylation<br />

of the N-terminal domain to the C-terminus of the<br />

calmodulin-binding sequence. MLCK is reported to<br />

bind the actin filament in a manner that also allows the<br />

simultaneous binding of the other major thin filament<br />

components; calponin, tropomyosin, etc. The binding site<br />

is suggested to be on the outside of sub-domain 1. There<br />

is approximately one MLCK molecule for every 100 actin<br />

molecules in smooth muscle and each MLCK contains at<br />

least three of the DFRXXL motifs allowing each molecule<br />

to bind three actins (K d = 4 mM).<br />

References:<br />

Kamm, K.E., and Stull, J.T. 200 . J. Biol. Chem. 276, 4527.<br />

Hatch, V., et al. 200 . J. Cell Biol. 154, 6 .<br />

Smith, L., and Stull, J.T. 2000. FEBS let. 480, 298.<br />

Le, L-H., et al. 999. Proc. Natl. Acad. Sci. USA 96, 6666.<br />

Sellers, J.R., and Pato, M.D. 984. J.Biol.Chem. 259, 7740.<br />

Product Cat. No. Comments Size Price<br />

A3, Hydrochloride 100122 [N-(2-Aminoethyl)-5-chloronaphthalene-1-sulfonamide, HCl]<br />

A shorter alkyl chain derivative of W-7 (Cat. No. 68 629) that inhibits MLCK<br />

(K i = 7.4 mM), CK I (K i = 80 mM), CK II (K i = 5. mM), PKA (K i = 4.3 mM), PKC (K i = 47 mM),<br />

and PKG (K i = 3.8 mM).<br />

Gö 7874, Hydrochloride 365252 A potent and selective inhibitor of protein kinase C (IC 50 = 4 nM for rat brain PKC).<br />

Inhibits protein kinase A (IC 50 = 5 0 nM), protein kinase G (IC 50 = 4.8 mM), and myosin<br />

light chain kinase (IC 50 = 20 nM) at much higher concentrations.<br />

K-252a, Nocardiopsis<br />

sp.<br />

InSolution K-252a,<br />

Nocardiopsis sp.<br />

K-252b, Nocardiopsis<br />

sp.<br />

420298 A cell-permeable inhibitor of MLCK (K i = 7 nM), CaM kinase II (K i = .8 nM), PKC<br />

(K i = 25 nM), and PKG (K i = 20 nM). Also acts as a potent inhibitor (IC 50 = 3 nM) of the<br />

protein tyrosine kinase activity of the NGF receptor gp 40 trk .<br />

0 mg $90<br />

500 mg $ 00<br />

00 mg $ 33<br />

420297 A mM ( 00 mg/2 4 ml) solution of K-252a (Cat. No. 420298) in anhydrous DMSO. 00 mg $ 28<br />

420319 A non-selective inhibitor of MLCK (K i = 47 nM), PKA (K i = 90 nM), PKC (K i = 20 nM),<br />

and PKG (K i = 00 nM).<br />

ML-7, Hydrochloride 475880 [1-(5-Iodonaphthalene-1-sulfonyl)homopiperazine, HCl]<br />

A cell-permeable, potent and selective inhibitor of MLCK (K i = 300 nM).<br />

Inhibits PKA (K i = 2 mM) and PKC (K i = 42 mM) at much higher concentrations.<br />

ML-9, Hydrochloride 475882 [1-(5-Chloronaphthalene-1-sulfonyl)homopiperazine, HCl]<br />

A cell-permeable inhibitor of MLCK (K i = 3.8 mM), PKA (K i = 32 mM), and<br />

PKC (K i = 54 mM).<br />

Myosin Light Chain<br />

Kinase <strong>Inhibitor</strong> Peptide<br />

8<br />

475981 (H-RKKYKYRRK-NH 2 ; MLCK <strong>Inhibitor</strong> Peptide 18)<br />

A highly basic nonapeptide that acts as a selective inhibitor of MLCK (IC 50 = 50 nM).<br />

Does not block calmodulin (CaM) or inhibit the activities of CaM Kinase II or PKA.<br />

Piceatannol 527948 (trans-3,3´,4,5´-Tetrahydroxystilbene)<br />

A plant metabolite that preferentially inhibits the activity of p72 Syk (IC 50 ~ 0 mM).<br />

Also acts as an inhibitor of rat liver PKA catalytic subunit (IC 50 = 3 mM), PKC<br />

(IC 50 = 8 mM), and MLCK (IC 50 = 2 mM).<br />

Staurosporine,<br />

Streptomyces sp.<br />

More online... www.calbiochem.com/inhibitors/MLCK<br />

569397 A potent, cell-permeable broad-spectrum inhibitor of protein kinases. Inhibits MLCK<br />

(IC 50 = .3 nM), CaM kinase (IC 50 = 20 nM), PKA (IC 50 = 7 nM), PKC (IC 50 = 700 pM),<br />

and PKG (IC 50 = 8.5 nM).<br />

50 mg<br />

00 mg<br />

$76<br />

$ 33<br />

mg $99<br />

mg $99<br />

5 mg $ 6<br />

00 mg<br />

250 mg<br />

mg $4<br />

$ 43<br />

$302<br />

Technical Support<br />

Phone 800 628 8470<br />

E-mail calbiochem@emdbiosciences.com<br />

29


Phosphorylation/Dephosphorylation<br />

Myosin Light Chain Kinase (MLCK) <strong>Inhibitor</strong>s, continued<br />

Product Cat. No. Comments Size Price<br />

W-5, Hydrochloride 681625 [N-(6-Aminohexyl)-1-naphthalenesulfonamide, HCl]<br />

Calmodulin antagonist that inhibits myosin light chain kinase (IC 50 = 230 mM) and<br />

Ca 2+ -calmodulin-dependent phosphodiesterase (IC 50 = 240 mM).<br />

W-7, Hydrochloride 681629 [N-(6-Aminohexyl)-5-chloro-1-naphthalenesulfonamide, HCl]<br />

A cell-permeable calmodulin antagonist that inhibits myosin light chain kinase<br />

(IC 50 = 5 mM) and Ca 2+ -calmodulin-dependent phosphodiesterase (IC 50 = 28 mM).<br />

W- 2, Hydrochloride 681635 [N-(4-Aminobutyl)-2-naphthalenesulfonamide, HCl]<br />

Calmodulin antagonist that inhibits myosin light chain kinase (IC 50 = 300 mM) and<br />

Ca 2+ -calmodulin-dependent phosphodiesterase (IC 50 = 260 mM).<br />

W- 3, Hydrochloride 681636 [N-(4-Aminobutyl)-5-chloro-2-naphthalenesulfonamide, HCl]<br />

Calmodulin antagonist that inhibits myosin light chain kinase (IC 50 = 58 mM) and<br />

Ca 2+ -calmodulin-dependent phosphodiesterase (IC 50 = 68 mM).<br />

mg $77<br />

0 mg $77<br />

mg $77<br />

mg $77<br />

30 Orders Phone 800 854 34 7<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Fax 800 776 0999<br />

Web www.emdbiosciences.com/calbiochem


Phosphatidylinositol 3-Kinase (PI 3-Kinase) <strong>Inhibitor</strong>s<br />

The PI 3-kinases are ubiquitous, heterodimeric enzymes<br />

that play a pivotal role in the regulation of many cellular<br />

processes, including motility, proliferation, and survival,<br />

and carbohydrate metabolism. They are dual-specificity<br />

enzymes capable of phosphorylating phosphoinositides.<br />

PI 3-kinases are divided into three classes. Class I<br />

kinases were the first to be characterized and include<br />

receptor regulated heterodimeric enzymes consisting of<br />

a 110 kDa catalytic subunit and an 85 kDa regulatory<br />

subunit (p85/p110a; p85/p110b; p101/P110g). They can<br />

use PI, PI (4)P, and PI (4,5)P 2 as substrates in vitro. The<br />

major substrate in vivo appears to be PI(4,5)P 2 . The<br />

members of this class are sensitive to wortmannin. Class<br />

II PI 3-kinases can phosphorylate PI and PI(4)P in vitro<br />

and show variable responses to wortmannin. This class<br />

of enzymes contains a C-2 domain at the C-terminal<br />

region that binds phospholipids in a Ca 2+ -dependent<br />

manner. They participate in integrin signaling in<br />

platelets. Class III PI 3-kinases include Vps34 that can<br />

phosphorylate PI(3)P. The human homologue of Vps34 is<br />

reported to be sensitive to wortmannin and participates<br />

in the regulation of endocytic membrane trafficking.<br />

Activated PI 3-kinase phosphorylates phosphoinositol<br />

(PI) substrates to produce PI(3)P, PI(3,4)P 2 , and PI(3,4,5)P 3 .<br />

Phosphatidylinositol 3-Kinase (PI 3-kinase) <strong>Inhibitor</strong>s<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Phosphorylation/Dephosphorylation<br />

Product Cat. No. Comments Size Price<br />

ET- 8-OCH 3 341207 (Edelfosine; 1-O-Octadecyl-2-O-methyl-rac-glycero-3-phosphorylcholine)<br />

A non-selective weak inhibitor of PI 3-kinase (IC 50 = 35 mM).<br />

These molecules act as second messengers and recruit<br />

the PI 3-K-dependent serine/threonine kinases<br />

(PDK1) and Akt from the cytoplasm to the plasma<br />

membrane. Lipid binding and membrane translocation<br />

lead to conformational changes in Akt, which gets<br />

phosphorylated on Thr 308 in the activation loop, and<br />

Ser 473 in the hydrophobic phosphorylation motif by<br />

PDK1. This dual phosphorylation causes full activation<br />

of the enzyme. <strong>Inhibitor</strong>s of PI 3-kinase and overexpression<br />

of dominant negative PI 3-kinase mutants are<br />

shown to block many of the physiological responses of a<br />

cell to insulin, indicating that PI 3-kinase lies upstream<br />

of these events. PI 3-kinase is becoming an attractive<br />

target for drug development, particularly in the areas<br />

of cancer and other proliferative diseases as well as<br />

in the treatment of inflammatory and immunological<br />

conditions.<br />

References:<br />

Scheid, M.P., and Woodgett, J.R. 2003. FEBS Lett. 546, 08.<br />

Lawlor M.A., and Alessi, D.R. 200 . J. Cell Sci. 114, 2903.<br />

Toker, A., and Newton, A.C. 2000. J. Biol. Chem. 275, 827 .<br />

Stein, R.C, and Waterfield, M.D. 2000. Mol. Med. Today 6, 347.<br />

Dong, Z., et al. 999. Anticancer Res. 19, 3743.<br />

Prior, I.A., and Clague, M.J. 999. Mol. Cell Biol. Res. Commun. 1, 62.<br />

More online... www.calbiochem.com/inhibitors/PI3K<br />

LY 294002 440202 [2-(4-Morpholinyl)-8-phenyl-4H-1-benzopyran-4-one]<br />

A cell-permeable, potent and specific inhibitor of PI 3-kinase that acts on the ATP-<br />

binding site of the enzyme (IC 50 = .4 mM). Also inhibits non-homologous DNA end-joining<br />

in the 460 kDa PI 3-like kinase DNA-PKcs, which is the catalytic subunit of DNAactivated<br />

protein kinase.<br />

InSolution LY 294002 440204 [2-(4-Morpholinyl)-8-phenyl-4H-1-benzopyran-4-one]<br />

A 0 mM ( mg/325 ml) solution of LY 294002 (Cat. No. 440202) in anhydrous DMSO.<br />

LY 3035 440203 (2-Piperazinyl-8-phenyl-4H-1-benzopyran-4-one)<br />

A negative control for the PI 3-kinase inhibitor, LY 294002 (Cat. No. 440202).<br />

Contains a single atom substitution in the morpholine ring compared to LY 294002.<br />

Does not affect PI 3-kinase activity even at concentrations ≥ 00 mM.<br />

N PI 3-Kg <strong>Inhibitor</strong> 528106 [5-Quinoxalin-6-ylmethylene-thiazolidine-2,4-dione]<br />

A cell-permeable, potent, selective and ATP-competitive inhibitor of PI 3-Kg<br />

(K i = 7.8 nM; IC 50 = 8 nM, 60 nM, 270 nM, and 300 nM for p 0-g, a, b and d-isoforms,<br />

respectively), while exhibiting no detectable effect against a wide panel of kinases,<br />

receptors, enzymes, and ion channels even at concentrations as high as mM.<br />

5 mg $80<br />

5 mg $ 24<br />

mg $43<br />

mg $99<br />

5 mg $ 39<br />

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3


Phosphorylation/Dephosphorylation<br />

Phosphatidylinositol 3-Kinase (PI 3-kinase) <strong>Inhibitor</strong>s, continued<br />

Product Cat. No. Comments Size Price<br />

N PI 3-Kg <strong>Inhibitor</strong> II 528108 5-(2,2-Difluoro-benzo[1,3]dioxol-5-ylmethylene)-thiazolidine-2,4-dione<br />

A cell-permeable thiazolidinedione compound that acts as a potent and ATP-competitive<br />

inhibitor of PI 3-Kg (K i = 80 nM; IC 50 = 250 nM). Exhibits great selectivity over<br />

PI 3-Ka (IC50 = 4.5 µM), PI 3-Kb and d (IC 50 > 20 µM), and shows little effect towards<br />

a large panel of receptors, unrelated enzymes, ion channels, and 38 commonly studied<br />

kinases.<br />

Quercetin, Dihydrate 551600 (3,3´,4´,5,7-Pentahydroxyflavone)<br />

An inhibitor of PI 3-kinase (IC 50 = 3.8 mM) and phospholipase A 2 (IC 50 = 2 mM).<br />

Also inhibits mitochondrial ATPase, phosphodiesterases, and PKC.<br />

Wortmannin 681675 (KY 12420)<br />

A fungal metabolite that acts as a potent, selective, cell-permeable and irreversible<br />

inhibitor of PI 3-kinase in purified preparations and cytosolic fractions (IC 50 = 5 nM).<br />

Blocks the catalytic activity of PI 3-kinase without affecting the upstream signaling<br />

events.<br />

Call us or visit<br />

our website<br />

5 mg $ 35<br />

00 mg $33<br />

mg $76<br />

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32 Orders Phone 800 854 34 7<br />

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Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Phosphorylation/Dephosphorylation<br />

Protein Kinase A (PKA; cAMP-Dependent Protein Kinase) <strong>Inhibitor</strong>s<br />

The cAMP-dependent protein kinase (protein kinase<br />

A; PKA) pathway is one of the most versatile signaling<br />

pathways in eukaryotic cells. Various extracellular<br />

signals converge on this signaling pathway through<br />

ligand binding to G protein-coupled receptors. Hence,<br />

the PKA pathway is tightly regulated at several levels to<br />

maintain specificity in the multitude of signal inputs.<br />

PKA is composed of two regulatory and two catalytic<br />

subunits. In the holoenzyme, the regulatory subunits<br />

are bound to the active site of the catalytic subunits,<br />

inactivating them. Binding of cAMP to the regulatory<br />

subunits causes a conformational change that releases<br />

and activates the two catalytic subunits. The active<br />

catalytic subunits can then phosphorylate serine and/or<br />

threonine residues on the substrates in the cytosol and<br />

in the nucleus. When the levels of cAMP begin to fall,<br />

the regulatory subunits regain their affinity towards the<br />

catalytic subunits and form the inactive holoenzyme. If<br />

cAMP levels remain persistently elevated, many cells<br />

change their behavior and may either differentiate,<br />

proliferate, or undergo apoptosis.<br />

PKA holoenzyme exists in two forms, type I and<br />

type II. They contain identical catalytic subunits;<br />

however, their regulatory subunits differ (RI or RII<br />

dimer). Type I holoenzyme is predominantly cytosolic,<br />

whereas type II holoenzyme is compartmentalized to<br />

subcellular organelles via specific anchoring proteins.<br />

The turnover rate of free type I regulatory subunit<br />

is significantly higher than that of type II subunits.<br />

When free catalytic subunit is microinjected into the<br />

cytoplasm of intact cells, it migrates to the nucleus,<br />

whereas the free regulatory subunit remains only in<br />

the cytoplasm following microinjection. When both<br />

subunits are co-injected, the regulatory subunit blocks<br />

the nuclear migration of the catalytic subunit. CREB<br />

is a major nuclear target for the catalytic subunit that<br />

binds to cAMP response elements (CREs) in the promoter<br />

regions of cAMP-responsive genes. Phosphorylation of<br />

CREB proteins alters their ability to form dimers and to<br />

interact with CREs.<br />

References:<br />

Protein Kinase A (PKA; cAMP-Dependent Protein Kinase) <strong>Inhibitor</strong>s<br />

Skålhegg, B.S. et al. 2005. Curr. Drug Targets. 6, 655.<br />

Tasken, K, and Aandahl, E.M. 2004. Physiol. Rev. 84, 37.<br />

Taylor, S.S., et al. 2004. Biochim. Biophys. Acta 1697, 259.<br />

Skålhegg, B.S., and Tasken, K. 2000. Front. Biosci. 5, 678.<br />

Spaulding, S.W. 993. Endocrine Rev. 14, 632.<br />

Product Cat. No. Comments Size Price<br />

A3, Hydrochloride 100122 [N-(2-Aminoethyl)-5-chloronaphthalene-1-sulfonamide, HCl]<br />

A shorter alkyl chain derivative of W-7 (Cat. No. 68 629) that inhibits PKA<br />

(K i = 4.3 mM),) casein kinase I (K i = 80 mM), casein kinase II (K i = 5. mM), MLCK<br />

(K i = 7.4 mM), PKC (K i = 47 mM), and PKG (K i = 3.8 mM).<br />

Adenosine 3´,5´-cyclic<br />

Monophosphorothioate,<br />

Rp-Isomer,<br />

Triethylammonium Salt<br />

Adenosine 3´,5´-cyclic<br />

Monophosphorothioate,<br />

8-Bromo-, Rp-Isomer,<br />

Sodium Salt<br />

Adenosine 3´,5´-cyclic<br />

Monophosphorothioate,<br />

8-Bromo-2´monobutyryl-,<br />

Rp-<br />

Isomer, Sodium Salt<br />

Adenosine 3´,5´-cyclic<br />

Monophosphorothioate,<br />

8-Chloro-, Rp-Isomer,<br />

Sodium Salt<br />

More online... www.calbiochem.com/inhibitors/PKA<br />

116814 (Adenosine 3´,5´-cyclic Phosphorothioate-Rp; Rp-cAMPS, TEA)<br />

A cell-permeable inhibitor of protein kinase A (K i = mM). Resistant to hydrolysis<br />

by phosphodiesterases.<br />

116816 (Rp-8-Br-cAMPS, Na)<br />

A potent, cell-permeable, metabolically-stable cAMP antagonist that inhibits cAMPdependent<br />

protein kinase and shows preference for PKA type I. More lipophilic than<br />

cAMP antagonist Rp-cAMPS (Cat. No. 68 4).<br />

116813 (Rp-8-Br-MB-cAMPS, Na)<br />

An inhibitor of PKA that also inhibits the basal Ca 2+ -currents in smooth muscle.<br />

Reported to block the excitatory effect of 8-Bromo-cGMP (Cat No. 68 6).<br />

More lipophilic and cell-permeable than Rp-8-Br-cAMPS.<br />

116819 (Rp-8-Cl-cAMPS, Na)<br />

A cell-permeable, metabolically stable cAMP analog that acts as a competitive inhibitor<br />

of PKA. Preferentially inhibits type I PKA (IC 50 ~50 mM).<br />

0 mg $90<br />

5 mmol $ 92<br />

5 mmol $422<br />

5 mmol $524<br />

5 mmol $486<br />

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33


Phosphorylation/Dephosphorylation<br />

Protein Kinase A (PKA; cAMP-Dependent Protein Kinase) <strong>Inhibitor</strong>s, continued<br />

Product Cat. No. Comments Size Price<br />

Adenosine 3´,5´-cyclic<br />

Monophosphorothioate,<br />

2´-O-Monobutyryl-,<br />

Rp-Isomer, Sodium Salt<br />

4-Cyano-3methylisoquinoline<br />

116825 (Rp-MB-cAMPS, Na)<br />

A cell-permeable precursor of Rp-cAMPS (Cat. No. 68 4), a PKA inhibitor.<br />

Rp-MB-cAMPS is cleaved by intracellular esterases to release butyrate and Rp-cAMPS.<br />

The Rp-cAMPS binds to the cAMP binding site on PKA type I and type II, thereby<br />

preventing holoenzyme dissociation and PKA activation.<br />

238900 A potent, cell-permeable, specific inhibitor of PKA (IC 50 = 30 nM). Inhibition is<br />

competitive with respect to ATP.<br />

Daphnetin 268295 (7,8-Dihydroxy-2H-1-benzopyran-2-one; 7,8-Dihydroxycoumarin)<br />

A coumarin analog that acts as an inhibitor of several protein kinases. Inhibits EGFR<br />

kinase (IC 50 = 7.67 mM), PKA (IC 50 = 9.33 mM), and PKC (IC 50 = 25 mM), in vitro.<br />

Ellagic Acid, Dihydrate 324683 (4,4´,5,5´,6,6´-Hexahydroxydiphenic Acid 2,6,2´,6´-Dilactone)<br />

A potent antioxidant that acts as a potent inhibitor of PKA catalytic subunit<br />

and PKC (IC 50 = 2 and 8 mM respectively). Also inhibits DNA topoisomerases I and II<br />

(IC 50 = .8 mM and 2. mM, respectively).<br />

H-7, Dihydrochloride 371955 [1-(5-Isoquinolinesulfonyl)-2-methylpiperazine, 2HCl]<br />

A broad based serine-threonine kinase inhibitor. Potent inhibitor of MLCK (K i = 97 mM), PKA<br />

(K i = 3.0 mM), PKC (K i = 6 mM), and PKG (K i = 5.8 mM). Not available for sale in Japan.<br />

H-8, Dihydrochloride 371958 {N-[2-(Methylamino)ethyl]-5-isoquinolinesulfonamide, 2HCl}<br />

Highly active inhibitor of cyclic-nucleotide-dependent protein kinases. Inhibits MLCK<br />

(K i = 68 mM), PKA (K i = .2 mM), PKC (K i = 5 mM), and PKG (K i = 480 nM). Not available<br />

for sale in Japan.<br />

H-9, Dihydrochloride 371961 [N-(2-Aminoethyl)-5-isoquinolinesulfonamide, 2HCl]<br />

Closely resembles H-8 in its chemical structure and inhibition potency. Inhibits PKA<br />

(K i = .9 mM), PKC (K i = 8 mM), and PKG (K i = 870 nM). Useful as a ligand for the<br />

separation and purification of these three enyzmes. Not available for sale in Japan.<br />

H-89, Dihydrochloride 371963 {N-[2-((p-Bromocinnamyl)amino)ethyl]-5-isoquinolinesulfonamide, 2HCl}<br />

A cell-permeable, selective and potent inhibitor of PKA (K i = 48 nM). Inhibits other<br />

kinases at several fold higher concentrations: MLCK (K i = 28.3 mM), CaM kinase II<br />

(K i = 29.7 mM), PKC (K i = 3 .7 mM), casein kinase I (K i = 38.3 mM), and Rho Kinase II<br />

(IC 50 = 270 nM). Not available for sale in Japan.<br />

InSolution H-89,<br />

Dihydrochloride<br />

HA 004,<br />

Dihydrochloride<br />

HA 077,<br />

Dihydrochloride<br />

K-252a, Nocardiopsis<br />

sp.<br />

InSolution K-252a,<br />

Nocardiopsis sp.<br />

K-252b,<br />

Nocardiopsis sp.<br />

371962 {N-[2-((p-Bromocinnamyl)amino)ethyl]-5-isoquinolinesulfonamide, 2HCl}<br />

A 0 mM ( mg/ 93 ml) solution of H-89, Dihydrochloride (Cat. No. 37 963) in<br />

anhydrous DMSO. Not available for sale in Japan.<br />

371964 [N-(2-Guanidinoethyl)-5-isoquinolinesulfonamide, 2HCl]<br />

A novel intracellular Ca 2+ -antagonist that inhibits CaM Kinase II (K i = 3 mM),<br />

MLCK (K i = 50 mM), PKA (K i = 2.3 mM), PKC (K i = 40 mM), and PKG (K i = .3 mM).<br />

Not available for sale in Japan.<br />

371970 [Fasudil; (5-Isoquinolinesulfonyl)homopiperazine, 2HCl]<br />

Cell-permeable Ca 2+ -antagonist that inhibits PKA (IC 50 = .6 mM), PKG (IC 50 = .6 mM),<br />

and MLCK (IC 50 = 3.6 mM). Also reported to potently inhibit Rho-associated kinase.<br />

420298 A cell-permeable inhibitor of CaM kinase II (K i = .8 nM), MLCK (K i = 7 nM), PKA<br />

(K i = 8 nM), PKC (K i = 25 nM), and PKG (K i = 20 nM). Also acts as a potent inhibitor<br />

(IC 50 = 3 nM) of the tyrosine protein kinase activity of the NGF receptor gp 40 trk , the<br />

product of the trk proto-oncogene.<br />

5 mmol $452<br />

mg $95<br />

0 mg $50<br />

500 mg $57<br />

34 Orders Phone 800 854 34 7<br />

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Fax 800 776 0999<br />

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mg<br />

5 mg<br />

mg<br />

5 mg<br />

$84<br />

$327<br />

$84<br />

$327<br />

mg $84<br />

mg $84<br />

mg $84<br />

mg $57<br />

mg $84<br />

00 mg $ 33<br />

420297 A mM ( 00 mg/2 4 ml) solution of K-252a (Cat. No. 420298) in DMSO. 00 mg $ 28<br />

420319 A non-selective inhibitor of MLCK (K i = 47 nM), PKA (K i = 90 nM), PKC (K i = 20 nM),<br />

and PKG (K i = 00 nM).<br />

KT5720 420320 Prepared by a chemical modification of K-252a (Cat. No. 420298). Potent specific<br />

cell-permeable inhibitor of PKA (K i = 56 nM) that does not significantly affect the<br />

activity of PKC, PKG, or MLCK.<br />

InSolution KT5720 420323 A 2 mM (50 mg/47 ml) solution of KT5720 (Cat. No. 420320) in anhydrous DMSO. 50 mg $76<br />

Piceatannol 527948 (trans-3,3´,4,5´-Tetrahydroxystilbene)<br />

A plant metabolite that preferentially inhibits the activity of p72 Syk (IC 50 ~ 0 mM).<br />

Also inhibits rat liver PKA catalytic subunit (IC 50 = 3 mM), PKC (IC 50 = 8 mM),<br />

MLCK (IC 50 = 2 mM), and wheat embryo Ca 2+ /dependent protein kinase (IC 50 = 9 mM).<br />

50 mg<br />

00 mg<br />

50 mg<br />

00 mg<br />

$76<br />

$ 33<br />

$76<br />

$ 33<br />

mg $4


Protein Kinase A (PKA; cAMP-Dependent Protein Kinase) <strong>Inhibitor</strong>s, continued<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Phosphorylation/Dephosphorylation<br />

Product Cat. No. Comments Size Price<br />

Protein Kinase A<br />

<strong>Inhibitor</strong> 5-24<br />

Protein Kinase A<br />

<strong>Inhibitor</strong> 6-22 Amide<br />

Protein Kinase A<br />

<strong>Inhibitor</strong> 4-22 Amide,<br />

Cell-Permeable,<br />

Myristoylated<br />

Staurosporine,<br />

Streptomyces sp.<br />

InSolution<br />

Staurosporine,<br />

Streptomyces sp.<br />

116805 (H-TTYADFIASGRTGRRNAIHD)<br />

Peptide corresponding to the active site on the skeletal muscle inhibitor protein.<br />

Competitive inhibitor of PKA (K i = 2.3 nM).<br />

539684 (PKI 6-22 Amide, PKA <strong>Inhibitor</strong>; TYADFIASGRTGRRNAI-NH 2 )<br />

A potent and competitive inhibitor of PKA (K i = .7 nM).<br />

476485 (Myr-GRTGRRNAI-NH 2 ; Myristoylated Protein Kinase A <strong>Inhibitor</strong> Amide 14-22,<br />

Cell-Permeable; PKI 14-22 Amide, Cell-Permeable)<br />

A heat-stable protein kinase inhibitor (PKI) peptide sequence ( 4-22) that has been<br />

myristoylated at the N-terminus, enhancing its cell-permeability. The non-myristoylated<br />

version of this peptide is shown to be a highly specific inhibitor of PKA (K i = 36 nM).<br />

569397 A potent, cell-permeable broad spectrum inhibitor of protein kinases. Inhibits CaM<br />

kinase (IC 50 = 20 nM), MLCK (IC 50 = .3 nM), PKA (IC 50 = 7 nM), PKC (IC 50 = 0.7 nM),<br />

and PKG (IC 50 = 8.5 nM).<br />

569396 A mM ( 00 mg/2 4 ml) solution of Staurosporine, Streptomyces sp.<br />

(Cat. No. 569397) in anhydrous DMSO.<br />

TX- 23 655200 [2-((3,5-di-tert-Butyl-4-hydroxyphenyl)-methylene)-4-cyclopentene-1,3-dione]<br />

A cell-permeable inhibitor of PKA (IC 50 = 9.6 mM). Also acts as an inhibitor of Src,<br />

and eEF2-K (IC 50 = 2.2 and 3.2 mM, respectively).<br />

<br />

500 mg $ 24<br />

mg $ 08<br />

500 mg $84<br />

00 mg<br />

250 mg<br />

$ 43<br />

$302<br />

00 mg $ 43<br />

0 mg $90<br />

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35


Phosphorylation/Dephosphorylation<br />

Protein Kinase C (PKC) <strong>Inhibitor</strong>s<br />

Protein kinase C (PKC), a ubiquitous, phospholipiddependent<br />

enzyme, is involved in signal transduction<br />

associated with cell proliferation, differentiation, and<br />

apoptosis. At least eleven closely related PKC isozymes<br />

have been reported that differ in their structure,<br />

biochemical properties, tissue distribution, subcellular<br />

localization, and substrate specificity. They are<br />

classified as conventional (a, b1, b2, g), novel (d, e, h,<br />

θ, m), and atypical (z, l) isozymes. Conventional PKC<br />

isozymes are Ca 2+ -dependent, while novel and atypical<br />

isozymes do not require Ca 2+ for their activation. All PKC<br />

isozymes, with the exception of z and l, are activated<br />

by diacylglycerol (DAG). PKC isozymes negatively<br />

or positively regulate critical cell cycle transitions,<br />

including cell cycle entry and exit and the G 1 and G 2<br />

checkpoints.<br />

All PKC isoforms show different distribution among<br />

various cells. The a, d, and z isoforms are found in all<br />

cells. The g isoform is found only in neuronal cells. The<br />

b, e, and l isoforms are found in various tissues, whereas<br />

h and t isoforms are predominantly found in epithelial<br />

and immune cells.<br />

In its unstimulated state, most of the PKC resides in<br />

the cytosol. In this state, the pseudosubstrate sequence<br />

of the regulatory domain of PKC interacts with the<br />

catalytic domain and prevents access of the substrate<br />

to the catalytic site. Binding of a hormone or other<br />

effector molecule to the membrane receptor results in<br />

activation of phospholipase C (PLC) or phospholipase<br />

A 2 (PLA 2 ) via a G-protein-dependent phenomenon.<br />

The activated PLC hydrolyzes phosphatidylinositol-4,<br />

5-bisphosphate (PIP 2 ) to produce DAG and inositol-<br />

1,4,5-trisphosphate (IP 3 ). The IP 3 causes the release of<br />

endogenous Ca 2+ that binds to the cytosolic PKC and<br />

exposes the phospholipidbinding site. The binding<br />

of Ca 2+ translocates PKC to the membrane, where it<br />

interacts with DAG and is transformed into a fully active<br />

enzyme.<br />

Altered PKC activity has been linked with various types<br />

of malignancies. Higher levels of PKC and differential<br />

activation of various PKC isozymes have been reported<br />

in breast tumors, adenomatous pituitaries, thyroid<br />

cancer tissue, leukemic cells, and lung cancer cells.<br />

Downregulation of PKC a is reported in the majority<br />

of colon adenocarcinomas and in the early stages of<br />

intestinal carcinogenesis. Thus, PKC inhibitors have<br />

become important tools in the treatment of cancers. The<br />

involvement of PKC in the regulation of apoptosis adds<br />

another dimension to the effort to develop drugs that<br />

will specifically target PKC.<br />

References:<br />

Oka, M., and Kikkawa, U. 2005. Cancer Metastasis Rev. 24, 287.<br />

Mailoi, E., and Fortino, V. 2004. Endocr. Relat. Cancer 11, 6 .<br />

Black, J.D. 2000. Front. Biosci. 5, 406.<br />

Cooper, D.R., et al. 999. Arch. Biochem. Biophys. 372, 69.<br />

Yamamoto, M., et al. 998. Exp. Cell Res. 240, 349.<br />

Rasmussen, H., et al. 995. Endocr. Rev. 16, 649.<br />

Taylor, S.S., et al. 995. FASEB J. 9, 255.<br />

Nishizuka, Y. 995. FASEB. J. 9, 484.<br />

Newton, A.C. 995. J. Biol. Chem. 270, 28495.<br />

Hanks, S., and Hunter, T. 995. FASEB J. 9, 576.<br />

Blobe, G.C., et al. 994. Cancer Metastasis Rev. 13, 4 .<br />

Basu, A. 993. Pharmacol. Ther. 59, 257.<br />

More online... www.calbiochem.com/inhibitors/PKC<br />

36 Orders Phone 800 854 34 7<br />

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Isozyme Specificities of Selected Protein Kinase C <strong>Inhibitor</strong>s (IC 50 values are in µM)<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Phosphorylation/Dephosphorylation<br />

Product Cat. No. PKC a PKC b PKC bI PKC bII PKC g PKC d PKC e PKC z PKC m PKC h Ref.<br />

Bisindolylmaleimide I (Gö 6850) 203290 0.008 — 0.0 8 — — 0.2 0. 32 5.8 — —<br />

CGP4 25 — 0.024 — 0.0 7 0.032 0.0 8 0.360 4.50 > 000 — 0.060 2<br />

Gö 6976 365250 0.0023 — 0.006 — — — — — 0.02 —<br />

Gö 6983 365251 0.007 0.007 — — 0.006 0.0 — 0.06 20 — 3<br />

LY33353 — 0.360 — 0.0047 0.0059 0.400 0.250 0.600 > 0 5 — 0.052 4<br />

PKCb <strong>Inhibitor</strong> 539654 0.33 — 0.02 0.005 > .0 — 2.8 — — — 5<br />

Ro-3 -7549 557508 0.053 0. 95 0. 63 0.2 3 — 0. 75 — — — 6<br />

Ro-3 -8220 557520 0.005 — 0.024 0.0 4 0.027 — 0.024 — — — 6<br />

Ro-3 -8425 557514 0.008 — 0.008 0.0 4 0.0 3 — 0.039 — — — 6<br />

Ro-32-0432 557525 0.009 — 0.028 0.03 0.037 — 0. 08 — — — 6<br />

Rottlerin 557370 30 42 — — 40 3 - 6 00 00 — — 7<br />

Staurosporine 569397 0.028 — 0.0 3 0.0 0.032 0.028 0.025 > .5 — — 6<br />

UCN0 — 0.029 — 0.034 — 0.030 0.590 0.530 — — — 8<br />

References:<br />

. Martiny-Baron, G.M. et al. 993. J. Biol. Chem. 268, 9 94.<br />

2. Marte, B.M., et al. 994. Cell Growth Differ. 5, 239.<br />

3. Gschwendt, M., et al. 996. FEBS Lett. 392, 77.<br />

Protein Kinase C (PKC) <strong>Inhibitor</strong>s<br />

Product Cat. No. Comments Size Price<br />

Bisindolylmaleimide I 203290 {2-[1-(3-Dimethylaminopropyl)-1H-indol-3-yl]-3-(1H-indol-3-yl)-maleimide;<br />

Gö 6850; GF 109203X}<br />

InSolution<br />

Bisindolylmaleimide I<br />

Bisindolylmaleimide I,<br />

Hydrochloride<br />

A highly selective cell-permeable PKC inhibitor (K i = 0 nM) that is structurally similar<br />

to staurosporine. Acts as a competitive inhibitor for the ATP-binding site of PKC. Shows<br />

high selectivity for the a, bII, g, and e isozymes of PKC. May inhibit protein kinase A at a<br />

much higher concentration (K i = 2 mM).<br />

203293 {2-[1-(3-Dimethylaminopropyl)-1H-indol-3-yl]-3-(1H-indol-3-yl)-maleimide; Gö 6850}<br />

A mg/ml solution of Bisindolylmaleimide I (Cat. No. 203290) in anhydrous DMSO.<br />

203291 {2-[1-(3-Dimethylaminopropyl)-1H-indol-3-yl]-3-(1H-indol-3-yl)maleimide, HCl}<br />

An inhibitor of PKC (K i = 0 nM). Inhibits PKA at much higher concentrations (K i = 2 mM).<br />

An enhanced water-soluble form of Bisindolylmaleimide I (Cat. No. 203290).<br />

Bisindolylmaleimide II 203292 {2-[1-[2-(1-Methylpyrrolidino)ethyl]-1H-indol-3-yl]-3-(1H-indol-3-yl)maleimide}<br />

A potent and selective inhibitor of PKC (IC 50 = 3 nM). Also inhibits PKA at much higher<br />

concentrations (IC 50 = 2 mM).<br />

Bisindolylmaleimide III,<br />

Hydrochloride<br />

203294 {2-[1-(3-Aminopropyl)-1H-indol-3-yl]-3-(1H-indol-3-yl)maleimide, HCl}<br />

A potent and selective inhibitor of PKC (IC 50 = 26 nM). It also inhibits PKA at much<br />

higher concentrations (IC 50 = 500 nM).<br />

Bisindolylmaleimide IV 203297 [Arcyriarubin A; 2,3-bis(1H-Indol-3-yl)maleimide]<br />

A potent and selective inhibitor of PKC (IC 50 = 87 nM) and PKA (IC 50 = 2.7 mM).<br />

Bisindolylmaleimide V 203303 [2,3-bis(1H-Indol-3-yl)-N-methylmaleimide; Ro 31-6045]<br />

Useful as a negative control compound for PKC inhibition studies (IC 50 > 00 mM).<br />

Blocks the activation of p70 s6k /p85 s6k in vivo (IC 50 = 8 mM).<br />

Calphostin C,<br />

Cladosporium<br />

cladosporioides<br />

Cardiotoxin, Naja<br />

nigricollis<br />

4. Jirousek, M.R., et al. 996. J. Med. Chem. 39, 2664.<br />

5. Tanaka, M., et al. 2004. Bioorg. Med. Chem. Lett. 14, 5 7 .<br />

6. Wilkinson, S.E., at al. 993. Biochem. J. 294, 335.<br />

7. Gschwendt, M., et al. 994. Biochem. Biophys. Res. Commun. 199, 93.<br />

8. Seynaeve, C.M., et al. 994. Mol. Pharmacol. 45, 207.<br />

208725 (UCN-1028c)<br />

Cell-permeable, highly specific inhibitor of PKC (IC 50 = 50 nM) that interacts with<br />

the protein’s regulatory domain by competing at the binding site of diacylglycerol<br />

and phorbol esters. At higher concentrations inhibits MLCK (IC 50 > 5 mM), PKA<br />

(IC 50 > 50 mM), PKG (IC 50 >25 mM), and p60 v-src protein tyrosine kinase (IC 50 > 50 mM).<br />

Does not compete with Ca 2+ or phospholipids.<br />

217504 A cytolytic toxin that causes depolarization of skeletal muscle fibers in vitro. Stimulates<br />

Ca 2+ transport and ATP hydrolysis by sarcolemmal Ca 2+ /Mg 2+ -ATPase. Its action is<br />

strongly potentiated by phospholipase A 2 . Inhibits PKC (IC 50 = .8 mM). Not available for<br />

sale outside of the United States.<br />

250 mg<br />

mg<br />

250 mg<br />

mg<br />

250 mg<br />

mg<br />

250 mg<br />

mg<br />

250 mg<br />

mg<br />

$35<br />

$ 03<br />

ml $ 07<br />

$35<br />

$ 03<br />

mg $ 45<br />

50 mg<br />

00 mg<br />

$52<br />

$ 42<br />

$49<br />

$ 4<br />

$44<br />

$ 4<br />

$8<br />

$ 48<br />

mg $ 63<br />

Technical Support<br />

Phone 800 628 8470<br />

E-mail calbiochem@emdbiosciences.com<br />

37


Phosphorylation/Dephosphorylation<br />

Protein Kinase C (PKC) <strong>Inhibitor</strong>s, continued<br />

Product Cat. No. Comments Size Price<br />

Chelerythrine Chloride 220285 Naturally occurring alkaloid. Cell-permeable, selective inhibitor of PKC (IC 50 = 660 nM).<br />

Acts on the catalytic domain irrespective of the attachment of the regulatory domain.<br />

A competitive inhibitor with respect to the phosphate acceptor and a non-competitive<br />

inhibitor with respect to ATP. Over ten-fold more potent than H-7, Dihydrochloride<br />

(Cat. No. 37 955).<br />

Dequalinium Chloride 263225 (DECA)<br />

An antitumor agent and PKC inhibitor. When exposed to UV light, DECA covalently and<br />

irreversibly inhibits PKC a or PKC b (IC 50 = 7- 8 mM).<br />

Ellagic Acid, Dihydrate 324683 (4,4´,5,5´,6,6´-Hexahydroxydiphenic Acid 2,6,2´,6´-Dilactone)<br />

A potent antioxidant with anti-mutagenic and anti-carcinogenic properties. Inhibits<br />

DNA topoisomerases I and II (IC 50 = .8 mM and 2. mM, respectively). Acts as a potent<br />

inhibitor of PKA catalytic subunit and PKC (IC 50 = 2 mM and 8 mM respectively).<br />

Gö 6976 365250 [12-(2-Cyanoethyl)-6,7,12,13-tetrahydro-13-methyl-5-oxo-5H-indolo(2,3-a)<br />

pyrrolo (3,4-c)-carbazole; Go 6976]<br />

An inhibitor of PKC (IC 50 = 7.9 nM for rat brain). Selectively inhibits Ca 2+ -dependent PKC<br />

a-isozyme (IC 50 = 2.3 nM) and PKC bI (IC 50 = 6.2 nM). Does not affect the kinase activity<br />

of the Ca 2+ -independent PKC d , PKC e , and PKC z isoenzymes even at micromolar levels.<br />

InSolution Gö 6976 365253 [12-(2-Cyanoethyl)-6,7,12,13-tetrahydro-13-methyl-5-oxo-5H-indolo(2,3-a)<br />

pyrrolo (3,4-c)-carbazole; Go 6976, Solution]<br />

A 500 mg/ml solution of Gö 6976 (Cat. No. 365250) in anhydrous DMSO.<br />

Gö 6983 365251 {2-[1-(3-Dimethylaminopropyl)-5-methoxyindol-3-yl]-3-(1H-indol-3-yl) maleimide;<br />

Go 6983}<br />

A potent inhibitor of PKC that has been shown to selectively inhibit several PKC isozymes<br />

(IC 50 = 7 nM for PKC a and PKC b ; 6 nM for PKC g ; 0 nM for PKC d ; 60 nM for PKC z ).<br />

Gö 6983 does not effectively inhibit PKC m (IC 50 = 20 mM) and can thus be used<br />

to differentiate PKC m from other PKC isozymes.<br />

Gö 7874, Hydrochloride 365252 A potent and selective inhibitor of rat brain PKC (IC 50 = 4 nM) versus MLCK<br />

(IC 50 = 20 nM), PKA (IC 50 = 50 nM), and PKG (IC 50 = 4.8 mM).<br />

H-7, Dihydrochloride 371955 [1-(5-Isoquinolinesulfonyl)-2-methylpiperazine, 2HCl]<br />

A broad based serine-threonine kinase inhibitor. Potent inhibitor of MLCK (K i = 97 mM),<br />

PKA (K i = 3 mM), PKC (K i = 6 mM), and PKG (K i = 5.8 mM). Not available for sale in Japan.<br />

Iso-H-7,<br />

Dihydrochloride<br />

371956 [1-(5-Isoquinolinesulfonyl)-3-methylpiperazine, 2HCl]<br />

Less potent than H-7 in inhibiting rat brain PKC isoforms (IC 50 = 50 mM).<br />

Also inhibits other cyclic-nucleotide-dependent protein kinases.<br />

HBDDE 372770 (2,2´,3,3´,4,4´-Hexahydroxy-1,1´-biphenyl-6,6´-dimethanol Dimethyl Ether)<br />

An inhibitor of PKC that selectively inhibits PKC a (IC 50 = 43 mM) and PKC g (IC 50 = 50 mM)<br />

over PKC d , PKC bI , and PKC bII isozymes.<br />

Hispidin 377980 [6-(3,4-Dihydroxystyrl)-4-hydroxy-2-pyrone]<br />

A potent inhibitor of PKC b isoform (IC 50 = 2 mM).<br />

Hypericin 400076 A polycyclic dione that inhibits PKC (IC 50 = 3.3 mM). Also known to inhibit the<br />

protein tyrosine kinase activities of the insulin receptor (IC 50 = 20 - 29 nM), EGFR<br />

(IC 50 = 35 nM), casein kinase II (IC 50 = 6 nM), and MAP kinase (IC 50 = 4 nM).<br />

Useful probe for PKC due to its bright red fluorescence emission and photostability.<br />

K-252a, Nocardiopsis<br />

sp.<br />

InSolution K-252a,<br />

Nocardiopsis sp.<br />

K-252b, Nocardiopsis<br />

sp.<br />

420298 A cell-permeable protein kinase inhibitor that inhibits CaM kinase II (K i = .8 nM),<br />

MLCK (K i = 7 nM), PKA (K i = 8 nM), PKC (K i = 25 nM), and PKG (K i = 20 nM).<br />

5 mg $97<br />

500 mg $57<br />

500 mg $57<br />

500 mg $ 22<br />

ml $ 36<br />

500 mg $89<br />

500 mg $ 00<br />

38 Orders Phone 800 854 34 7<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Fax 800 776 0999<br />

Web www.emdbiosciences.com/calbiochem<br />

mg<br />

5 mg<br />

$84<br />

$327<br />

mg $87<br />

mg $ 38<br />

2 mg $ 44<br />

mg $ 05<br />

00 mg $ 33<br />

420297 A mM ( 00 mg/2 4 ml) solution of K-252a (Cat. No. 420298) in anhydrous DMSO. 00 mg $ 28<br />

420319 A non-selective inhibitor of MLCK (K i = 47 nM), PKA (K i = 90 nM), PKC (K i = 20 nM),<br />

and PKG (K i = 00 nM).<br />

K-252c 420305 Inhibits PKA (IC 50 = 25.7 mM) and PKC (IC 50 = 2.45 mM). mg $ 50<br />

Melittin 444605 A 26-residue polypeptide from bee venom that binds calmodulin in a Ca 2+ -dependent<br />

manner. Activates phospholipase A 2 and inhibits protein kinase C (IC 50 = 5-7 mM) by<br />

binding to the catalytic domain in a Mg 2+ -ATP sensitive manner. Has also been used<br />

for affinity purification of several Ca 2+ -binding proteins. A stimulator of G i a and G a<br />

activity that is reported to inhibit adenylate cyclase activity in synaptic membranes.<br />

50 mg<br />

00 mg<br />

$76<br />

$ 33<br />

250 mg $67


Protein Kinase C (PKC) <strong>Inhibitor</strong>s, continued<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Phosphorylation/Dephosphorylation<br />

Product Cat. No. Comments Size Price<br />

NGIC-I 481500 (Non-glycosidic Indolocarbazole I)<br />

A potent and selective inhibitor of PKC (IC 50 = 75 nM) versus PKA (IC 50 > 0 mM) and PKG<br />

(IC 50 = 320 nM).<br />

Phloretin 524488 (2´,4´,6´-Trihydroxy-3-p-hydroxyphenylpropiophenone)<br />

A flavonoid that prevents the activation of PKC.<br />

Piceatannol 527948 (trans-3,3´,4,5´-Tetrahydroxystilbene)<br />

A plant metabolite that preferentially inhibits the activity of p72 Syk (IC 50 ~ 0 mM).<br />

Also acts as an inhibitor of the rat liver PKA catalytic subunit (cAK) (IC 50 = 3 mM), PKC<br />

(IC 50 = 8 mM), MLCK (IC 50 = 2 mM), and wheat embryo Ca 2+ -dependent protein kinase<br />

(CDPK) (IC 50 = 9 mM).<br />

N PKC b <strong>Inhibitor</strong> 539654 [3-(1-(3-Imidazol-1-ylpropyl)-1H-indol-3-yl)-4-anilino-1H-pyrrole-2,5-dione]<br />

A potent, ATP-competitive inhibitor of PKC b isozymes (IC 50 = 5 nM and 2 nM for human<br />

PKC bII and bI ). Displays greater selectivity over PKC a , PKC g , and PKC e (IC 50 = 33 nM,<br />

> mM, and 2.8 mM, respectively).<br />

N PKC bII /EGFR <strong>Inhibitor</strong> 539652 A cell-permeable symmetrical phthalimide compound that acts as a potent and ATPcompetitive<br />

inhibitor of EGFR and PKC isozymes a, bI, and bII (IC 50 = 0.7, .9, 3.8, and<br />

0.4 mM, respectively), while exhibiting little or much weaker activity towards a panel of<br />

6 other kinases, including novel and atypical PKC isozymes. Reported to inhibit insulinstimulated<br />

cellular 2-deoxyglucose uptake, osteoclast differentiation, ERK activation,<br />

and TLS/FUS DNA-binding activity in vitro, and exhibit antitumor activity in mice in vivo.<br />

Polymyxin B Sulfate 5291 (Aerosporin)<br />

An antibiotic that inhibits phospholipid sensitive Ca 2+ -dependent protein kinase.<br />

Mixture of polymyxin B sulfate and polymyxin B 2 sulfate.<br />

Protein Kinase C<br />

<strong>Inhibitor</strong> 20-28,<br />

Cell-Permeable,<br />

Myristoylated<br />

Protein Kinase C<br />

<strong>Inhibitor</strong>, EGF-R<br />

Fragment 65 -658,<br />

Myristoylated<br />

Protein Kinase C<br />

<strong>Inhibitor</strong> Peptide 9-3<br />

Protein Kinase C<br />

<strong>Inhibitor</strong> Peptide 9-36<br />

Protein Kinase C h<br />

Pseudosubstrate<br />

<strong>Inhibitor</strong>, Myristoylated<br />

Protein Kinase C z<br />

Pseudosubstrate<br />

<strong>Inhibitor</strong><br />

Protein Kinase C z<br />

Pseudosubstrate<br />

<strong>Inhibitor</strong>, Myristoylated<br />

Protein Kinase C θ<br />

Pseudosubstrate<br />

<strong>Inhibitor</strong><br />

Protein Kinase C θ<br />

Pseudosubstrate<br />

<strong>Inhibitor</strong>, Myristoylated<br />

476480 (Myr-N-FARKGALRQ-NH 2 ; Myristoylated Protein Kinase C <strong>Inhibitor</strong> 20-28, Cell-Permeable)<br />

Pseudosubstrate sequence from PKC a and PKC b . N-terminal myristoylated to allow membrane<br />

permeability. Highly specific inhibitor of TPA activation of MARCKS phosphorylation<br />

in fibroblast primary cultures (IC 50 = 8 mM). Exhibits 98% inhibition at 00 mM.<br />

476475 [Myr-N-RKRTLRRL-OH; Myristoylated EGF-R Fragment (651-658), PKC <strong>Inhibitor</strong>]<br />

Epidermal growth-factor receptor (EGF-R) conserved sequence that is identical to verbB<br />

(95- 02). An N-terminal myristoylated membrane-permeable inhibitor that inhibits<br />

PKC (IC 50 = 5 mM) in intact cells.<br />

05-23-<br />

4904<br />

(PKC 19-31; RFARKGALRQKNV)<br />

More potent inhibitor of PKC (IC = 00 nM) than Protein Kinase C <strong>Inhibitor</strong> Peptide<br />

50<br />

9-36 (Cat. No. 539560).<br />

539560 (PKC 19-36; RFARKGALRQKNVHEVKN)<br />

Acts as a pseudo substrate by binding to the active sites of protein kinases.<br />

Potent inhibitor of PKC (K i = 47 nM) but not of PKA (IC 50 = 423 mM).<br />

539604 (Myr-TRKRQRAMRRRVHQING-NH 2 )<br />

A cell-permeable myristoylated PKC h pseudosubstrate inhibitor of protein kinase C h<br />

isozyme. Useful for studies of PKC h function in intact cells.<br />

539610 (SIYRRGARRWRKL)<br />

A non-cell-permeable PKC z pseudosubstrate sequence peptide that can be used as a<br />

competitive inhibitor PKC z in in vitro kinase assays.<br />

539624 (Myr-SIYRRGARRWRKL-OH)<br />

A cell-permeable myristoylated form of PKC z pseudosubstrate peptide<br />

(Cat. No. 5396 0) that includes amino acids 3– 25 of the pseudosubstrate region.<br />

Useful for inhibition studies of PKC z in intact cells.<br />

539634 (LHQRRGAIKQAKVHHVKC-NH 2 )<br />

A selective and competitive inhibitor of protein kinase C θ isozyme that includes amino<br />

acids 3– 25 of the pseudosubstrate sequence.<br />

539636 (Myr-LHQRRGAIKQAKVHHVKC-NH 2 )<br />

A cell-permeable myristoylated PKC θ pseudosubstrate sequence peptide<br />

(Cat. No. 539634). Useful for studies of PKC θ function in intact cells.<br />

500 mg $ 30<br />

200 mg $8<br />

mg $4<br />

500 mg $ 26<br />

2 mg $ 3<br />

500 mg<br />

g<br />

5 g<br />

$3<br />

$50<br />

$208<br />

500 mg $ 03<br />

500 mg $ 04<br />

mg<br />

5 mg<br />

500 mg<br />

mg<br />

$98<br />

$372<br />

$ 33<br />

$238<br />

500 mg $ 64<br />

500 mg $ 7<br />

500 mg $ 45<br />

500 mg $ 23<br />

500 mg $ 69<br />

Technical Support<br />

Phone 800 628 8470<br />

E-mail calbiochem@emdbiosciences.com<br />

39


Phosphorylation/Dephosphorylation<br />

Protein Kinase C (PKC) <strong>Inhibitor</strong>s, continued<br />

Product Cat. No. Comments Size Price<br />

Protein Kinase C e<br />

Translocation <strong>Inhibitor</strong><br />

Peptide<br />

Protein Kinase C e<br />

Translocation <strong>Inhibitor</strong><br />

Peptide, Negative<br />

Control<br />

539522 (EAVSLKPT; PKC e Translocation <strong>Inhibitor</strong> Peptide)<br />

An octapeptide that selectively inhibits the translocation of PKC e to subcellular sites.<br />

Inhibition of PKC e translocation is known to specifically block phorbol ester or<br />

norepinephrine-mediated regulation of contraction in cardiomyocytes.<br />

539542 (LSETKPAV)<br />

A scrambled peptide with an identical amino acid composition to that of PKC e<br />

Translocation <strong>Inhibitor</strong> Peptide (Cat. No. 539522). Useful as a negative control for<br />

this PKC e translocation inhibitor.<br />

Ro-3 -7549 557508 {2-[1-3(Aminopropyl)indol-3-yl]-3(1-methyl-1H-indol-3-yl)maleimide, Acetate;<br />

Bisindolylmaleimide VIII, Acetate}<br />

Ro 3 -7549,<br />

Immobilized<br />

A selective PKC inhibitor that acts at the ATP binding site of PKC (IC 50 = 58 nM for rat<br />

brain PKC). IC 50 values for individual PKC isozymes are as follows: 53 nM for PKC a ,<br />

95 nM for PKC bI , 63 nM for PKC bII , 2 3 nM for PKC g , and 75 nM for PKC e .<br />

557509 An immobilized form of the PKC inhibitor Ro-3 -7549 (Cat. No. 557508) that is<br />

covalently attached to hydrophilic acrylic beads via an 8-carbon spacer. Useful to<br />

affinity-precipitate PKC and other functionally related proteins from cell or tissue<br />

extracts. Binding capacity: ≥3 mg purified PKC a per gram of dry beads.<br />

Ro-3 -8220 557520 {3-[1-[3-(Amidinothio)propyl-1H-indol-3-yl]-3-(1-methyl-1H-indol-3-yl)maleimide;<br />

Bisindolylmaleimide IX, Methanesulfonate}<br />

N InSolution<br />

Ro-3 -8220<br />

A competitive, selective inhibitor of PKC (IC 50 = 0 nM) over PKA (IC 50 = 900 nM),<br />

CaM kinase (IC 50 = 7 mM) and phosphorylase protein kinase.<br />

557521 {3-[1-[3-(Amidinothio)propyl-1H-indol-3-yl]-3-(1-methyl-1H-indol-3-yl)maleimide;<br />

Bisindolylmaleimide IX, Methanesulfonate}<br />

A 5 mM (500 mg/ 8 ml) solution of Ro-3 -8220 (Cat. No. 557520) in H 2 O.<br />

Ro-3 -8425 557514 {2-[8-(Aminomethyl)-6,7,8,9-tetrahydropyrido[1,2-a]indol-3-yl]-3-(1-methyl-1H-indol-<br />

3-yl)maleimide, HCl; Bisindolylmaleimide X, HCl}<br />

A potent and selective inhibitor of PKC (IC 50 = 5 nM for rat brain PKC). Exhibits some<br />

degree of isozyme specificity (IC 50 = 8 nM for PKC a , 8 nM for PKC bI , 4 nM for PKC bII ,<br />

3 nM for PKC g , and 39 nM for PKC e ). Shows slight selectivity for the conventional PKC<br />

isozymes PKC a , PKC b , and PKC g over the Ca 2+ -independent PKC isozyme PKC e .<br />

Ro-32-0432 557525 {Bisindolylmaleimide XI, HCl; 2-{8-[(Dimethylamino)methyl]-6,7,8,9-tetrahydropyrido<br />

[1,2-a]indol-3-yl}-3-(1-methyl-1H-indol-3-yl)maleimide, HCl}<br />

A selective cell-permeable PKC inhibitor. Displays about a 0-fold greater selectivity<br />

for PKC a (IC 50 = 9 nM) and a 4-fold greater selectivity for PKC bI (IC 50 = 28 nM) over PKC e<br />

(IC 50 = 08 nM).<br />

Rottlerin 557370 (Mallotoxin)<br />

An inhibitor of PKC d (IC 50 = 3-6 mM) and PKC θ . Also inhibits PKC a , PKC b , and PKC g<br />

isoforms, but with significantly reduced potency (IC 50 = 30-42 mM). Has reduced<br />

inhibitory activity on PKC e , PKC h , and PKC x (IC 50 = 80- 00 mM). Also known to inhibit<br />

CaM kinase III (IC 50 = 5.3 mM).<br />

Safingol 559300 (L-threo-Dihydrosphingosine)<br />

A lyso-sphingolipid PKC inhibitor that competitively interacts at the regulatory phorbol<br />

binding domain of PKC. Inhibits enzymatic activity and 3 H-phorbol dibutyrate binding of<br />

purified rat brain PKC (IC 50 = 37.5 mM and 3 mM, respectively). Inhibits human PKC a in<br />

MCF-7 DOXR cells (IC 50 = 40 mM).<br />

Sangivamycin 559307 (7-Deaza-7-carbamoyladenosine; NSC-65346)<br />

A cytotoxic purine nucleoside that acts as a selective and potent inhibitor of PKC<br />

(IC 50 = 0 mM). The inhibition is competitive with respect to ATP and non-competitive<br />

with respect to histone and lipid cofactors.<br />

D-erythro-Sphingosine,<br />

Free Base, Bovine Brain<br />

D-erythro-Sphingosine,<br />

Free Base, High Purity<br />

567725 (trans-D-erythro-2-Amino-4-octadecene-1,3-diol; Ceramide; Cerebroside)<br />

A potent and selective inhibitor of PKC (PKC; IC 50 = 2.8 mM) and insulin receptor tyrosine<br />

kinase. PKC inhibition is competitive with respect to diacylglycerol, phorbol dibutyrate,<br />

and Ca 2+ .<br />

567726 (trans-D-erythro-2-Amino-4-octadecene-1,3-diol; Ceramide; Cerebroside)<br />

A highly purified preparation of Cat. No. 567725 containing >99% of the erythro isomer.<br />

A potent and selective inhibitor of PKC (IC 50 = 2.8 mM) and insulin receptor tyrosine kinase.<br />

PKC inhibition is competitive with respect to diacylglycerol, phorbol dibutyrate, and Ca 2+ .<br />

5 mg $ 56<br />

5 mg $ 56<br />

mg $95<br />

set $ 32<br />

500 mg $83<br />

500 mg $83<br />

mg $95<br />

40 Orders Phone 800 854 34 7<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Fax 800 776 0999<br />

Web www.emdbiosciences.com/calbiochem<br />

500 mg<br />

mg<br />

$70<br />

$ 2<br />

0 mg $77<br />

mg $ 2<br />

mg $87<br />

0 mg $69<br />

0 mg $83


Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Phosphorylation/Dephosphorylation<br />

Product Cat. No. Comments Size Price<br />

D-erythro-Sphingosine,<br />

Dihydro-<br />

D-erythro-Sphingosine,<br />

N,N-Dimethyl-<br />

N Scytonemin, Lyngbya<br />

sp.<br />

N<br />

Protein Kinase C (PKC) <strong>Inhibitor</strong>s, continued<br />

Staurosporine,<br />

Streptomyces sp.<br />

300230 (Sphinganine)<br />

Biosynthetic precursor of sphingosine. Inhibits PKC in Chinese hamster ovary cells<br />

(IC 50 = 2.9 mM).<br />

0 mg $79<br />

310500 A PKC inhibitor (IC 50 = 2 mM) that also enhances src kinase activity. 5 mg $8<br />

565715 (SCY)<br />

A cell-permeable, dimeric indolo-phenol compound that acts as a selective, reversible,<br />

non-toxic, and mixed type inhibitor of polo-like kinase (Plk ; IC 50 = 2.0 mM) and PKC bI<br />

(IC 50 = 3.4 mM) and exhibits anti-proliferative and anti-inflammatory properties. Also<br />

inhibits several other cell cycle regulatory kinases, and PKC bII (IC 50 = .2 mM, .4 mM,<br />

3.0 mM, and 2.7 mM for Myt , Chk , Cdk /B, and PKC bII ). At higher concentrations,<br />

affects the activities of PKA and Tie2 (IC 50 > 0 mM).<br />

569397 A potent, cell-permeable broad spectrum inhibitor of protein kinases. Inhibits CaM<br />

kinase (IC 50 = 20 nM), MLCK (IC 50 = .3 nM), PKA (IC 50 = 7 nM), PKC (IC 50 = 700 pM),<br />

and PKG (IC 50 = 8.5 nM).<br />

00 mg<br />

250 mg<br />

mg $98<br />

Tamoxifen Citrate 579000 A potent synthetic anti-estrogen. A reversible inhibitor of PKC (IC 50 = 0 mM). 00 mg $4<br />

Tamoxifen,<br />

4-Hydroxy-, (Z)-<br />

579002 [(Z)-4-Hydroxytamoxifen; 4-OH-TAM]<br />

An active metabolite of the widely used therapeutic anti-estrogen agent, tamoxifen<br />

(Cat. No. 579000) that is more potent than the parent compound. Inhibits PKC by<br />

modifying its catalytic domain.<br />

TER 4687 581800 [(±)-2N,N-Dimethylaminomethyl-1-indanone, HCl]<br />

Blocks the association between protein kinase C θ -V and p59fyn in a yeast reporter<br />

assay. Prevents normal translocation of PKC θ in T cells. Has no effect on other PKC<br />

isozymes in Jurkat or normal T cells.<br />

Vitamin E Succinate 679130 (a-Tocopheryl Succinate; VES)<br />

Enhances the immune response and induces cellular differentiation and/or growth<br />

inhibition. VES has been shown to modulate adenylate cyclase and cAMP-dependent<br />

proteins, inhibit protein kinase C activity, bind to a cellular vitamin E binding protein,<br />

suppress c-myc and c-H-ras oncogene expression, and regulate TGF-b protein<br />

production. Also shown to induce apoptosis in RL cells. Exhibits antioxidant properties.<br />

Polo-like Kinase <strong>Inhibitor</strong><br />

Scytonemin, Lyngbya sp.<br />

To view all PKC research-related products and<br />

to request your free PKC wall poster, visit our<br />

PKC Interactive Pathways at:<br />

www.calbiochem.com/pkc<br />

A cell-permeable, dimeric indolo-phenol compound that acts as a<br />

selective, reversible, non-toxic, and mixed type inhibitor of polo-like<br />

kinase (Plk ; IC 50 = 2.0 mM) and PKC bI (IC 50 = 3.4 mM) and exhibits<br />

anti-proliferative and anti-inflammatory properties. Also inhibits several<br />

other cell cycle regulatory kinases, and PKC bII (IC 50 = .2 mM, .4 mM,<br />

3.0 mM, and 2.7 mM for Myt , Chk , Cdk /B, and PKC bII ). At higher<br />

concentrations, affects the activities of PKA and Tie2 (IC 50 > 0 mM).<br />

Cat. No. 565715 1 mg $98<br />

$ 43<br />

$302<br />

5 mg $97<br />

0 mg $ 23<br />

00 mg $34<br />

Technical Support<br />

Phone 800 628 8470<br />

E-mail calbiochem@emdbiosciences.com<br />

4


N<br />

Phosphorylation/Dephosphorylation<br />

Protein Kinase C (PKC) <strong>Inhibitor</strong> Sets<br />

Bisindolylmaleimide <strong>Inhibitor</strong> Set<br />

Contains 250 mg each of Bisindolylmaleimide I, Hydrochloride<br />

(Cat. No. 20329 ), Bisindolylmaleimide II (Cat. No.<br />

203292), Bisindolylmaleimide III, HCl (Cat. No. 203294),<br />

Bisindolylmaleimide IV (Cat. No. 203297), Bisindolylmaleimide V<br />

(Cat. No. 203303), and RIM- (Cat. No. 557325).<br />

Cat. No. 203305 1 set $276<br />

Serine/Threonine Kinase <strong>Inhibitor</strong> Set<br />

A set of 6 vials. Each set contains 250 mg of PKC inhibitor,<br />

Bisindolylmaleimide I (Cat. No. 203290); mg of PKA inhibitor,<br />

H-89, Dihydrochloride (Cat. No. 37 963); mg of PKG inhibitor,<br />

PKG <strong>Inhibitor</strong> (Cat. No. 370654); mg of MLCK inhibitor, ML-7<br />

(Cat. No. 475880); mg of CaM kinase II inhibitor, KN-93 (Cat.<br />

No. 422708); and 00 mg of the broad range Serine/Threonine<br />

Kinase inhibitor, Staurosporine (Cat. No. 569397). Not available<br />

for sale in Japan.<br />

Cat. No. 539572 1 set $354<br />

Related Products<br />

Recombinant PKC Isozymes<br />

Protein Kinase C , His•Tag®


Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Phosphorylation/Dephosphorylation<br />

Protein Kinase G (PKG; cGMP-Dependent Protein Kinase) <strong>Inhibitor</strong>s<br />

cGMP produces its effects by interacting with<br />

intracellular receptor proteins. A primary action of<br />

elevated cGMP levels is the stimulation of cGMPdependent<br />

protein kinase (PKG), which catalyzes the<br />

phosphorylation of a number of physiologically relevant<br />

proteins involved in contractile activity of smooth<br />

muscle cells. The mammalian PKG family consists of<br />

PKGIa and Ib, splice forms derived from one gene, and<br />

PKGII, encoded by a second gene. They are ubiquitous<br />

effector enzymes that regulate a variety of physiological<br />

processes in response to nitric oxide and natriuretic<br />

agonists. Cells of the cardiovascular system, such as<br />

fibroblasts and certain types of endothelial cells, contain<br />

PKGI. Smooth muscle cells are rich in PKGIa and Ib,<br />

platelets and T lymphocytes contain PKGIb, and cardiac<br />

myocytes contain PKGIa. It is important to note that<br />

PKGs are lost in many primary cell types upon passaging<br />

in cell culture and may not be detected in many cell<br />

lines. Studies have shown that cultured vascular smooth<br />

muscle cells (VSMCs) may stop expressing PKG and<br />

acquire a non-contractile phenotype. The restoration<br />

of PKG expression can result in the cells acquiring<br />

a more contractile phenotype. This is an important<br />

observation because several vascular disorders result<br />

from accumulation of noncontractile VSMC in the<br />

vessel wall. In endothelial cells PKGI phosphorylates<br />

and activates eNOS, which reduces its Ca 2+ -dependence.<br />

Also, in endothelial cells, PKGI and PKGII are known<br />

to phosphorylate 6-pyruvoyltetrahydropterin synthase<br />

to produce tetrahydrobiopterin, a required cofactor for<br />

eNOS activation.<br />

References:<br />

Protein Kinase G (PKG; cGMP-Dependent Protein Kinase) <strong>Inhibitor</strong>s<br />

Feil, R., et al. 2005, Rev. Neurosci. 16, 23.<br />

Munzel, T., et al. 2003. Circulation 108, 2 72.<br />

Browning, D.D., et al. 200 . J. Biol. Chem. 276, 3039.<br />

Wang, X., and Robinson, P.J. 997. J. Neurochem. 68, 443.<br />

Lincoln, T.M., et al. 200 . J. Appl. Physiol. 91, 42 .<br />

Product Cat. No. Comments Size Price<br />

A3, Hydrochloride 100122 [N-(2-Aminoethyl)-5-chloronaphthalene-1-sulfonamide, HCl]<br />

A shorter alkyl chain derivative of W-7 (Cat. No. 68 629) that inhibits PKG (K i = 3.8 mM),<br />

casein kinase I (K i = 80 mM), casein kinase II (K i = 5. mM), MLCK (K i = 7.4 mM), PKA<br />

(K i = 4.3 mM), and PKC (K i = 47 mM).<br />

Drosophila<br />

Antennapedia Homeo-<br />

Domain (43-58)<br />

Guanosine 3´,5´-cyclic<br />

Monophosphorothioate,<br />

Rp-Isomer,<br />

Triethylammonium Salt<br />

Guanosine 3´,5´-cyclic<br />

Monophosphorothioate,<br />

8-Bromo-, Rp-Isomer,<br />

Sodium Salt<br />

Guanosine 3´,5´-cyclic<br />

Monophosphorothioate,<br />

8-(4-Choloro-<br />

phenylthio)-, Rp-<br />

Isomer,<br />

Triethylammonium Salt<br />

Guanosine 3´,5´-cyclic<br />

Monophosphorothioate,<br />

b-Phenyl- , N 2 -etheno-<br />

8-bromo-, Rp-Isomer,<br />

Sodium Salt<br />

More online... www.calbiochem.com/inhibitors/PKG<br />

287895 (DT-5; RQIKIWFQNRRMKWKK)<br />

The membrane translocation signal sequence from Drosophila Antennapedia homeodomain<br />

(43-58) that inhibits PKGIa (K i = 970 nM). Does not exhibit significant inhibition<br />

against PKA (K i = 07 mM).<br />

370666 (Rp-cGMPS, TEA)<br />

A competitive inhibitor of PKGIa that blocks PKG and PKA activation (K i = 20 mM).<br />

Exhibits low cell permeability.<br />

370674 (Rp-8-Br-cGMPS, Na)<br />

A potent, cell-permeable, metabolically stable inhibitor of PKG. Significantly more<br />

lipophilic and membrane-permeable than cGMP or Rp-cGMPS. Resistant to mammalian<br />

cyclic nucleotide-dependent phosphodiesterases.<br />

370677 (Rp-8-pCPT-cGMPS, TEA)<br />

A potent, cell-permeable inhibitor of PKG Ia, Ib, and type II. A combination of the protein<br />

kinase inhibitor Rp-cGMPS and the widely used cGMP analog, 8-pCPT-cGMP. Significantly<br />

more lipophilic and membrane-permeant than Rp-cGMPS and Rp-8-Br-cGMPS. Resistant<br />

to hydrolysis by mammalian cyclic nucleotide dependent phosphodiesterases.<br />

370679 (Rp-8-Br-PET-cGMPS, Na)<br />

A metabolically stable, competitive inhibitor of PKGIa and Ib (K i = 30 nM).<br />

Also reported to block the activation of purified PKA type II (K i = 0 mM).<br />

More lipophilic and cell-permeable than Rp-8-pCPT-cGMPS (Cat. No. 370677).<br />

0 mg $90<br />

mg $90<br />

5 mmol $348<br />

5 mmol $430<br />

mmol $2 5<br />

mmol $ 4<br />

Technical Support<br />

Phone 800 628 8470<br />

E-mail calbiochem@emdbiosciences.com<br />

43


Phosphorylation/Dephosphorylation<br />

Protein Kinase G (PKG; cGMP-Dependent Protein Kinase) <strong>Inhibitor</strong>s, continued<br />

Product Cat. No. Comments Size Price<br />

H-7, Dihydrochloride 371955 [1-(5-Isoquinolinesulfonyl)-2-methylpiperazine, 2HCl]<br />

A potent inhibitor of PKG (K i = 5.8 mM), MLCK (K i = 97 mM), PKA (K i = 3.0 mM),<br />

and PKC (K i = 6 mM). Not available for sale in Japan.<br />

H-9, Dihydrochloride 371961 [N-(2-Aminoethyl)-5-isoquinolinesulfonamide, 2HCl]<br />

An inhibitor of PKG (K i = 870 nM), PKA (K i = .9 mM), and PKC (K i = 8.0 mM).<br />

Useful as a ligand for the separation and purification of these three enzymes.<br />

Not available for sale in Japan.<br />

H-9, Immobilized 371966 An immobilized form of the protein kinase inhibitor H-9 (Cat. No. 37 96 ) covalently<br />

attached to hydrophilic acrylic beads via an 8-carbon spacer. set = 25 mg of H-9<br />

Immobilized beads and 25 mg of control beads.<br />

HA 004,<br />

Dihydrochloride<br />

HA 077,<br />

Dihydrochloride<br />

K-252a, Nocardiopsis<br />

sp.<br />

InSolution K-252a,<br />

Nocardiopsis sp.<br />

K-252b, Nocardiopsis<br />

sp.<br />

371964 [N-(2-Guanidinoethyl)-5-isoquinolinesulfonamide, 2HCl]<br />

An inhibitor of PKG (K i = .3 mM), CaM kinase II (K i = 3 mM), MLCK (K i = 50 mM),<br />

PKA (K i = 2.3 mM), and PKC (K i = 40 mM). Not available for sale in Japan.<br />

371970 [Fasudil; (5-Isoquinolinesulfonyl)homopiperazine, 2HCl]<br />

An inhibitor of PKG (IC 50 = .6 mM), PKA (IC 50 = .6 mM), and MLCK (IC 50 = 3.6 mM).<br />

Also reported to potently inhibit Rho-associated kinase (ROCK).<br />

420298 A cell-permeable inhibitor of PKG (K i = 20 nM), CaM kinase II (K i = .8 nM),<br />

MLCK (K i = 7 nM), PKA (K i = 8 nM), and PKC (K i = 25 nM).<br />

420297 Supplied as a mM ( 00 mg/2 4 ml) solution of K-252a (Cat. No. 420298) in anhydrous<br />

DMSO.<br />

420319 An inhibitor of PKG (K i = 00 nM), MLCK (K i = 47 nM), PKA (K i = 90 nM), and PKC<br />

(K i = 20 nM).<br />

KT5823 420321 A cell-permeable, highly specific inhibitor of PKG (K i = 234 nM). Inhibits PKC<br />

(K i = 4.0 mM) and PKA (K i > 0.0 mM) at higher concentrations.<br />

Protein Kinase G<br />

<strong>Inhibitor</strong><br />

Protein Kinase G<br />

Ia <strong>Inhibitor</strong>,<br />

Cell-Permeable<br />

Staurosporine,<br />

Streptomyces sp.<br />

370654 (PKG <strong>Inhibitor</strong>; RKRARKE)<br />

A specific inhibitor of PKG (K i = 86 mM) relative to PKA (K i = 550 mM). Sequence corresponds<br />

to a non-phosphorylatable analog (Ser 32 to Ala 32 ) of histone H2B (residues 29-35).<br />

370655 (DT-3; cGMP-dependent Protein Kinase Ia <strong>Inhibitor</strong>, Cell-permeable; cGPK Ia <strong>Inhibitor</strong>,<br />

Cell-permeable; RQIKIWFQNRRMKWKKLRKKKKKH)<br />

A highly potent, membrane-permeable peptide that selectively inhibits PKG Ia<br />

(K i = 25 nM). <strong>Inhibitor</strong> peptide is fused to the Drosophila Antennapedia homeodomain<br />

peptide to allow membrane permeability.<br />

569397 A potent, cell-permeable, and broad spectrum inhibitor of protein kinases. Inhibits<br />

protein kinase A (IC 50 = 7 nM), CaM kinase (IC 50 = 20 nM), myosin light chain kinase<br />

(IC 50 = .3 nM), protein kinase C (IC 50 = 700 pM), and protein kinase G (IC 50 = 8.5 nM).<br />

Also inhibits platelet aggregation induced by collagen or ADP but has no effect on<br />

thrombin-induced platelet aggregation. Induces apoptosis in human malignant glioma<br />

cell lines. Arrests normal cells at the G checkpoint.<br />

44 Orders Phone 800 854 34 7<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Fax 800 776 0999<br />

Web www.emdbiosciences.com/calbiochem<br />

mg<br />

5 mg<br />

$84<br />

$327<br />

mg $84<br />

set $ 32<br />

mg $57<br />

mg $84<br />

00 mg $ 33<br />

00 mg $ 28<br />

50 mg<br />

00 mg<br />

50 mg<br />

00 mg<br />

00 mg<br />

250 mg<br />

$76<br />

$ 33<br />

$8<br />

$ 39<br />

mg $6<br />

mg $ 02<br />

$ 43<br />

$302


Protein Tyrosine Kinase (PTK) <strong>Inhibitor</strong>s<br />

Protein tyrosine kinases (PTKs) play a key role in<br />

the regulation of cell proliferation, differentiation,<br />

metabolism, migration, and survival. PTKs catalyze the<br />

transfer of g-phosphoryl groups from ATP to tyrosine<br />

hydroxyls of proteins. They are classified as receptor<br />

PTKs and non-receptor PTKs. Receptor PTKs contain<br />

a single polypeptide chain with a transmembrane<br />

segment. The extracellular end of this segment contains<br />

a high affinity ligand-binding domain, while the<br />

cytoplasmic end comprises the catalytic core and the<br />

regulatory sequences. The cytosolic end also contains<br />

tyrosine residues, which become substrates or targets<br />

for the tyrosine kinase portion of the receptor. PTK<br />

remains inactive until a ligand binds to the receptor,<br />

which leads to the dimerization of two ligand-bound<br />

receptors (exception: the tetrametric insulin receptor).<br />

Once activated, receptors are able to autophosphorylate<br />

tyrosine residues outside the catalytic domain. This<br />

stabilizes the active receptor conformation and creates<br />

phosphotyrosine-docking sites for proteins that transduce<br />

signals within the cell. The cytosolic portion of the<br />

phosphorylated receptor recruits a number of cytosolic<br />

adapter proteins via interactions between phosphorylated<br />

tyrosine residues on the receptor and the SH2 domain on<br />

the adapter molecule. Different proteins have different<br />

SH2 domains that recognize specific phosphotyrosine<br />

residues. An SH2-containing protein, Grb2, acts as a<br />

common adapter protein in a majority of growth factor<br />

related signaling events.<br />

Grb2 binding to phosphotyrosine residues changes<br />

its conformation and allows it to bind to proline-rich<br />

sequences in the carboxy terminal tail of Sos, a GDP-<br />

GTP exchange protein. This binding displaces an<br />

inhibitory domain in Sos and allows the activation of<br />

Sos, which then translocates to the plasma membrane<br />

to cause an exchange of GDP for GTP and activates Ras.<br />

A wide variety of effectors of Ras activation have been<br />

reported; however, activation of Raf, a cytoplasmic<br />

protein kinase, is one of the best studied examples.<br />

Ras binds to the N-terminus of Raf and recruits it to<br />

the inner surface of the plasma membrane, where it is<br />

phosphorylated by protein kinase C. Translocation of Raf<br />

to the membrane positions it in direct proximity to MAP<br />

kinase kinase (MEK). Raf phosphorylates MEK, which in<br />

turn phosphorylates MAP kinase (MAPK). In a resting<br />

cell, MAPK remains inactive because its phosphorylation<br />

lip excludes ATP access to the binding pocket. However,<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Ligand<br />

Ligand<br />

RTK<br />

Phosphorylation/Dephosphorylation<br />

P<br />

Cytoplasm<br />

MEK binding destabilizes the lip and exposes the buried<br />

tyrosine residues. Phosphorylation of the exposed<br />

tyrosine and the nearby threonine residues cause the lip<br />

to alter its conformation allowing ATP binding.<br />

Non-receptor tyrosine kinases include members of the<br />

Src, Tec, JAK, Fes, Abl, FAK, Csk, and Syk families.<br />

They are located in the cytoplasm as well as in the<br />

nucleus. They are activated by a large number of stimuli<br />

including hormones, neurotransmitters, growth factors,<br />

and cytokines. They exhibit distinct kinase regulation,<br />

substrate phosphorylation, and function. Deregulation<br />

of these kinases has also been linked to several human<br />

diseases. In most cases, their activation also begins<br />

with the phosphorylation of a tyrosine residue present<br />

in an activation loop. The best studied enzymes in<br />

this group include Src kinases. Src is believed to be<br />

negatively regulated by phosphorylation at Tyr 527 present<br />

at the C-terminus by Csk and other cellular kinases.<br />

The enzyme assumes an inactive conformation when<br />

this phosphotyrosine is bound by the Src SH2 domain<br />

in an intramolecular fashion. In this structure, the<br />

Src SH3 domain interacts with a single proline, Pro 250 ,<br />

in the linker region between the SH2 and catalytic<br />

domain. In contrast to Src, c-Abl kinase activity is<br />

stimulated by phosphorylation of a catalytic domain<br />

tyrosine residue, Tyr 412 , either via autophosphorylation<br />

or transphosphorylation by c-Src. Recent studies have<br />

indicated that dimerization or oligomerization of c-Abl<br />

might also be sufficient to activate Abl kinase activity<br />

in vivo. (continued…)<br />

RTK<br />

Nucleus<br />

P<br />

SOS<br />

Grb2<br />

GDP<br />

Ras<br />

Raf1<br />

MEK<br />

MAPK<br />

GTP<br />

Gene Expression<br />

Technical Support<br />

Phone 800 628 8470<br />

E-mail calbiochem@emdbiosciences.com<br />

45


Phosphorylation/Dephosphorylation<br />

Protein Tyrosine Kinase (PTK) <strong>Inhibitor</strong>s, continued<br />

Due to their involvement in various forms of cancers,<br />

PTKs have become prominent targets for therapeutic<br />

intervention. Selective receptor and non-receptor PTK<br />

inhibitors represent a promising class of anti-tumor<br />

agents. These agents are shown to inhibit multiple<br />

features of cancer cells, including proliferation,<br />

survival, invasion, and angiogenesis.<br />

More online... www.calbiochem.com/inhibitors/PTK<br />

Protein Tyrosine Kinase (PTK) <strong>Inhibitor</strong>s<br />

References:<br />

Tibes, R., et al. 2005. Annu. Rev. Pharmacol. Toxicol. 45, 357.<br />

Mazitschek, R., Giannis, A. 2004. Curr. Opin. Chem. Biol. 8, 432.<br />

Martin, G.S. 200 . Nat. Rev. Mol. Cell Biol. 2, 467.<br />

Ghosh, S., et al. 200 . Curr. Cancer Drug Targets 1, 29.<br />

Smith, K.M., and Van Etten, R.A. 200 . J. Biol. Chem. 276, 24372.<br />

Woodside, D.G., et al. 200 . Curr. Biol. 11, 799.<br />

Sada, K. et al. 200 . J. Biochem. (Tokyo) 130, 77.<br />

Brasher, B.B., and Van Etten, R.A. 2000. J. Biol. Chem. 275, 3563 .<br />

Plattner, R., et al. 999. Genes Dev. 13, 2400.<br />

Manes, G., et al. 999. Gene Ther. Mol. Biol. 4, 4 7.<br />

Stratowa, C., et al. 999. Anticancer Drug Des. 14, 393.<br />

Kyriakis, J.M. 999. J. Biol. Chem. 274, 5259.<br />

Product Cat. No. Comments Size Price<br />

A77 726 100128 [N-(4-Trifluoromethylphenyl)-2-cyano-3-hydroxycrotoamide]<br />

Inhibits the IL-2-induced tyrosine phosphorylation of JAK and JAK3.<br />

AG 9 658390 {[(4-Methoxybenzylidene)malononitrile; a-Cyano-(4-methoxy)cinnamonitrile];<br />

Tyrphostin A1}<br />

Inactive inhibitor that can be used as a negative control for inhibition of EGFR kinase<br />

(IC 50 > 250 mM).<br />

AG 7 658425 [a-Cyano-(3,5-di-t-butyl-4-hydroxy)cinnamonitrile; 3,5-di-t-Butyl-4-hydroxybenzylidenemalononitrile;<br />

NSC 242557; RG 50872; Tyrphostin A9]<br />

A selective inhibitor of the platelet-derived growth factor receptor tyrosine kinase<br />

(IC 50 = 500 nM).<br />

AG 8 658395 [a-Cyano-(3,4-dihydroxy)cinnamonitrile; RG-50810; Tyrphostin A23]<br />

An inhibitor of EGFR autophosphorylation (IC 50 = 40 mM) and the GTPase activity of<br />

transducin (IC 50 = 0 mM).<br />

AG 30 121760 [a-Cyano-(3,4-dihydroxy)cinnamic Acid; Tyrphostin AG 30]<br />

A potent protein tyrosine kinase inhibitor that is specific for c-ErbB.<br />

Inhibits the activation of STAT5 by c-ErbB in primary erythroblasts.<br />

AG 43 658450 [a-Cyano-(4-hydroxy)dihydrocinnamonitrile; Tyrphostin A63]<br />

Useful negative control for tyrphostins (IC 50 = 6.5 mM for EGFR tyrosine kinase activity).<br />

AG 82 658400 [a-Cyano-(3,4,5-trihydroxy)cinnamonitrile; Tyrphostin A25]<br />

A cell-permeable, competitive inhibitor of substrate binding on protein tyrosine kinases.<br />

Inhibits EGFR tyrosine kinase (IC 50 = 3 mM) and the GTPase activity of transducin<br />

(IC 50 = 7 mM).<br />

AG 99 658430 [a-Cyano-(3,4-dihydroxy)cinnamide; Tyrphostin A46; Tyrphostin B40]<br />

An inhibitor of EGFR tyrosine kinase (IC 50 = 0 mM) and EGF-dependent cell proliferation.<br />

AG 2 658440 [2-Amino-4-(4´-hydroxyphenyl)-1,1,3-tricyanobuta-1,3-diene; Tyrphostin A48]<br />

Inhibits EGFR tyrosine kinase (IC 50 = 25 nM).<br />

AG 83 658410 [2-Amino-4-(3´,4´,5´-trihydroxyphenyl)-1,1,3-tricyanobuta-1,3-diene; Tyrphostin A51]<br />

An inhibitor of EGFR tyrosine kinase (IC 50 = 800 nM).<br />

AG 2 3 658405 [a-Cyano-(3,4-dihydroxy)thiocinnamide; RG-50864; Tyrphostin A47]<br />

An inhibitor of EGFR tyrosine kinase (IC 50 = 2.4 mM).<br />

AG 490 658401 [a-Cyano-(3,4-dihydroxy)-N-benzylcinnamide; Tyrphostin B42]<br />

Potent inhibitor of EGFR kinase autophosphorylation (IC 50 = 00 nM).<br />

Also acts as a Jak family tyrosine kinase inhibitor.<br />

N AG 490, m-CF 3 658408 [(alpha-cyano-(3,4-dihydroxy)-N-(m-trifluoromethyl)benzylcinnamide]<br />

A cell-permeable, m-trifluoromethyl derivative of AG 490 (Cat. No. 65840 ) that<br />

displays enhanced antiproliferative properties (IC 50 = .7 mM, 2.8 mM, and 6. mM in<br />

2E8, Baf/3, and Jurkat cells, respectively). Shown to inhibit cytokine-induced JAK kinase<br />

activities, and promote cell death. Further, causes significant reductions in lymph node<br />

cellularity in IL7TG mouse model ( mg per animal, intraperitoneal).<br />

5 mg $ 00<br />

5 mg $43<br />

5 mg $52<br />

5 mg $52<br />

5 mg $64<br />

5 mg $66<br />

5 mg $52<br />

5 mg $52<br />

5 mg $52<br />

5 mg $90<br />

5 mg $49<br />

5 mg $38<br />

0 mg $88<br />

46 Orders Phone 800 854 34 7<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Fax 800 776 0999<br />

Web www.emdbiosciences.com/calbiochem


Protein Tyrosine Kinase (PTK) <strong>Inhibitor</strong>s, continued<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Phosphorylation/Dephosphorylation<br />

Product Cat. No. Comments Size Price<br />

AG 494 658407 [a-Cyano-(3,4-dihydroxy)-N-phenylcinnamide; Tyrphostin B48]<br />

<strong>Inhibitor</strong> of EGFR kinase autophosphorylation (IC 50 = .24 mM) that is slightly less active<br />

than AG 555 (Cat. No. 658404).<br />

AG 527 658402 [a-Cyano-(-)-(R)-N-(a-phenethyl)-3,4-dihydroxycinnamide; (-)-(R)-N-<br />

(a-Methylbenzyl)-3,4-dihydroxybenzylidinecyanoacetamide; Tyrphostin B44(-)]<br />

An inhibitor of EGFR kinase autophosphorylation (IC 50 = 2.5 mM). Also inhibits the<br />

phosphorylation of poly-GAT by the EGF receptor (IC 50 = 400 nM).<br />

AG 537, Bis-Tyrphostin 658418 (Bis-Tyrphostin)<br />

Competitively inhibits EGFR kinase autophosphorylation (IC 50 = 400 nM).<br />

AG 538 658403 [a-Cyano-(3,4-dihydroxy)cinnamoyl-(3´,4´-dihydroxyphenyl)ketone; Tyrphostin AG 538]<br />

A potent, competitive inhibitor of insulin-like growth factor- receptor (IGF- R)<br />

kinase autophosphorylation (IC 50 = 400 nM). Also inhibits the phosphorylation of PTK<br />

substrate poly (Glu,Tyr) by IGF- R, IR, EGF-R, and Src (IC 50 = 60 nM, 3 nM, and 2.4 mM<br />

respectively).<br />

I-OMe-AG 538 658417 [a-Cyano-(3-methoxy,4-hydroxy,5-iodo)cinnamoyl-(3´,4´-dihydroxyphenyl)ketone;<br />

Tyrphostin I-OMe-AG 538]<br />

An analog of AG 538 (Cat. No. 658403) that acts as an inhibitor of IGF- receptor kinase<br />

both in vitro and in intact cells. Inhibition is competitive with respect to the substrate<br />

binding site of IGF- receptor kinase. Exhibits enhanced cell-permeability and increased<br />

resistance to oxidation.<br />

AG 555 658404 [a-Cyano-(3,4-dihydroxy)-N-(3-phenylpropyl)cinnamide; Tyrphostin B46]<br />

A potent inhibitor of EGFR kinase autophosphorylation (IC 50 = 700 nM). Exhibits opposite<br />

potency profiles with AG 527 (Cat. No. 658402) for EGF receptor autophosphorylation<br />

versus poly-GAT substrate phosphorylation.<br />

AG 556 658415 [a-Cyano-(3,4-dihydroxy)-N-(4-phenylbutyl)cinnamide; Tyrphostin B56]<br />

A selective inhibitor of EGFR kinase (IC 50 = 5 mM) over HER -2 kinase autophosphorylation.<br />

AG 592 658406 {AGL 2592; 2-Cyano-N-(4-{4-[2-cyano-3-(3,4-dihydroxyphenyl)-acryloylamino]cyclohexylmethyl}-cyclohexyl)-3-(3,4-dihydroxyphenyl)-acrylamide}<br />

A selective, cell-permeable inhibitor of EGFR-tyrosine kinase activity (IC 50 = 20.3 mM).<br />

Blocks thymidine uptake in HER- 4 cells, and displays anti-proliferative properties.<br />

AG 825 121765 [4-Hydroxy-3-methoxy-5-(benzothiazolylthiomethyl)benzylidenecyanoacetamide]<br />

A potent, selective and ATP-competitive inhibitor of HER-2 (neu/erbB-2, IC 50 = 350 nM)<br />

relative to HER- (IC 50 = 9 mM) autophosphorylation.<br />

AG 835 658409 [a-Cyano-(+)-(S)-N-(a-phenethyl)-(3,4-dihydroxy)cinnamide; Tyrphostin B50(+)]<br />

A less active enantiomer of AG 527 (Cat. No. 658402) that inhibits EGFR kinase<br />

poly-GAT (poly-Glu-Ala-Tyr) substrate phosphorylation (IC 50 = 860 nM).<br />

AG 879 658460 [a-Cyano-(3,5-di-t-butyl-4-hydroxy)thiocinnamide]<br />

An inhibitor of nerve growth factor-dependent pp 40 c-trk tyrosine phosphorylation<br />

(EC 50 = 0 mM). Does not affect the tyrosine phosphorylation of EGFR or PDGFR.<br />

AG 957 121761 [4-Amino-N-(2,5-dihydroxybenzyl)methyl benzoate; NSC 654705]<br />

A potent and selective inhibitor of human p2 0 brc-abl (K i = 750 nM) over p 40 bcr-abl<br />

(K i = 0 mM).<br />

AG 957, Adamantyl<br />

Ester<br />

121762 [4-Amino-N-(2,5-dihydroxybenzyl)adamantyl Benzoate; 4-(2,5-Dihydroxybenzylamino)benzoic<br />

Acid Adamantan-1-yl Ester]<br />

A lipophilic, adamantyl ester form of tyrphostin AG 957 (Cat. No. 2 76 ) that displays<br />

anti-proliferative properties. Shown to be selective and ~3-4 fold more potent than<br />

AG 957 as a bcr/abl kinase inhibitor, and also exhibits a longer serum half-life in vivo.<br />

AG 024 121767 (3-Bromo-5-t-butyl-4-hydroxy-benzylidenemalonitrile)<br />

A specific inhibitor of insulin-like growth factor- (IGF- ) and insulin receptor kinases<br />

with significantly lower IC 50 values for IGF- than for insulin receptors.<br />

AG 295 658550 (6,7-Dimethyl-2-phenylquinoxaline)<br />

A selective inhibitor of PDGFR kinase (IC 50 = 500 nM). Does not affect EGFR<br />

autophosphorylation.<br />

5 mg $32<br />

5 mg $33<br />

5 mg $69<br />

5 mg $67<br />

5 mg $67<br />

5 mg $33<br />

5 mg $32<br />

5 mg $ 78<br />

2 mg $93<br />

5 mg $32<br />

5 mg $90<br />

5 mg $92<br />

5 mg $ 84<br />

mg $67<br />

5 mg $87<br />

Technical Support<br />

Phone 800 628 8470<br />

E-mail calbiochem@emdbiosciences.com<br />

47


Phosphorylation/Dephosphorylation<br />

Protein Tyrosine Kinase (PTK) <strong>Inhibitor</strong>s, continued<br />

Product Cat. No. Comments Size Price<br />

AG 296 658551 (6,7-Dimethoxy-3-phenylquinoxaline)<br />

More potent than AG 295 (Cat. No. 658550). Inhibits signaling of human PDGF areceptors<br />

(IC 50 = .0 mM), b-receptors (IC 50 = 800 nM), and the related stem cell factor<br />

receptor c-kit (80% inhibition at 5 mM). Has no effect on autophosphorylation of the<br />

vascular endothelial growth factor receptor KDR.<br />

AG 387 658520 [AG 555, 5-Iodo; a-Cyano-(3,4-dihydroxy)-5-iodo-N-(3-phenylpropyl)cinnamide;<br />

2-Cyano-3-(3,4-dihydroxy-5-iodo-phenyl)-N-(3-phenylpropyl)acrylamide]<br />

A 5-iodo analog of AG 555 (Cat. No. 628404) that is more cell-permeable than AG 555.<br />

Acts as an inhibitor of protein tyrosine kinase and DNA topoisomerase I.<br />

AG 433 658553 [2-(3,4-Dihydroxyphenyl)-6,7-dimethylquinoxaline, HCl; SU 1433]<br />

A potent and specific inhibitor of the PDGF b-receptor kinase (IC 50 = 5.0 mM) and of<br />

KDR/Flk- (IC 50 = 9.3 mM). Also acts as an angiogenesis inhibitor.<br />

AG 478 658552 [4-(3-Chloroanilino)-6,7-dimethoxyquinazoline]<br />

A highly potent and specific inhibitor of the EGFR tyrosine kinase (IC 50 = 3 nM). Inhibits<br />

the kinase activity of the closely-related HER2 (neu/erb-B2) receptor (IC 50 > 00 mM), the<br />

PDGFR (IC 50 > 00 mM), and p2 0 Bcr-Abl (IC 50 > 50 mM) at much higher concentrations.<br />

5 mg $97<br />

5 mg $87<br />

5 mg $<br />

5 mg $ 0<br />

InSolution AG 478 658548 Supplied as a 0 mM ( mg/3 7 ml) solution of AG 478 (Cat. No. 658552) in DMSO. mg $53<br />

AGL 2043 121790 {1,2-Dimethyl-6-(2-thienyl)-imidazolo[5,4-g]quinoxaline; Tyrphostin AGL 2043}<br />

A cell-permeable, potent, selective, ATP-competitive, and reversible inhibitor of type<br />

III receptor tyrosine kinases, PDGFR (IC 50 = 800 nM in 3T3 cells; 90 nM against purified<br />

PDGFb-receptor), Flt3, and Kit (IC 50 ~ –3 mM). Weakly inhibits PKA, EGFR, IGF- R,<br />

VEGFR, and Src kinases (IC 50 > 30 mM).<br />

AGL 2263 121850 (AG 2263)<br />

A cell-permeable, potent, substrate-competitive, but not ATP-competitive, inhibitor of<br />

insulin receptor kinase (IC 50 = 400) and insulin-like growth factor- receptor kinase<br />

(IC 50 = 430 nM).<br />

Aminogenistein 155100 (4´-Amino-6-hydroxyflavone)<br />

Inhibits protein-tyrosine kinase activity of p56 lck (IC 50 = .2 mM).<br />

Angiogenesis <strong>Inhibitor</strong> 175580 [(Z,E)-3-(Imidazol-4-ylmethylene)indolin-2-one]<br />

A cell-permeable, ATP-competitive inhibitor of hEGF-R tyrosine kinase activity (54%<br />

inhibition at 0 mM). Displays anti-angiogenesis properties (30% inhibition of control at<br />

0 mM in an in vitro rat aortic ring model) with a potency that is comparable to that of<br />

SU54 6 (Cat. No. 676487; 22% inhibition of control at 0 mM). Acts as a moderate ATPcompetitive<br />

inhibitor of hEGF-R tyrosine kinase activity (54% inhibition at 0 mM).<br />

N Bcr-abl <strong>Inhibitor</strong> 197221 GNF-2; (3-(6)-(4-Trifluoromethoxy-phenylamino)-pyrimidin-4-yl)-benzamide<br />

A cell-permeable pyrimidine compound that binds to the c-abl myristoyl binding pocket<br />

and acts as an allosteric, non-ATP-competitive inhibitor of cellular Bcr-abl activity and<br />

Bcr-abl-dependent cellular functions.<br />

BPDQ 203697 {4-[(3-Bromophenyl)amino]-6,7-diaminoquinazoline}<br />

A highly potent and specific inhibitor of EGFR kinase (IC 50 = 20 pM).<br />

BPIQ-I 203696 {8-[(3-Bromophenyl)amino]-3-methyl-3H-imidazo[4,5-g]-quinazoline}<br />

A highly potent and specific inhibitor of EGFR kinase (IC 50 = 25 pM).<br />

BPIQ-II 203704 {8-[(3-Bromophenyl)amino]-1H-imidazo[4,5-g]-quinazoline}<br />

One of the most potent and selective inhibitors of EGFR kinase (IC 50 = 8 pM).<br />

Butein 203987 (2´,4´,3,4-Tetrahydroxychalcone)<br />

A potent inhibitor of EGFR kinase (IC 50 = 65 mM) and p60 c-src (IC 50 = 65 mM).<br />

N cFMS Receptor Tyrosine<br />

Kinase <strong>Inhibitor</strong><br />

344036 A cell-permeable diaminopyrimidine compound that acts as a potent, selective, and<br />

ATP-competitive inhibitor of cFMS kinase activity (IC 50 = 30 nM) with minimal inhibition<br />

towards a panel of 26 other kinases (IC 50 > 5 µM). Shown to selectively inhibit cFMSmediated<br />

cellular functions in vitro as well as CSF- -dependent tumor growth in vivo.<br />

CL-387,785 233100 {N-[4-[(3-Bromophenyl)amino]-6-quinazolinyl]-2-butynamide; EKI-785}<br />

An irreversible inhibitor of autophosphorylation of EGFR (IC 50 = 250 - 490 nM).<br />

Compound 56 234505 {4-[(3-Bromophenyl)amino]-6,7-diethoxyquinazoline}<br />

One of the most potent inhibitors of EGFR kinase activity (IC 50 = 6 pM).<br />

mg $ 90<br />

5 mg $ 52<br />

mg $ 0<br />

0 mg $87<br />

5 mg $ 30<br />

mg $ 0<br />

mg $ 0<br />

mg $ 0<br />

5 mg $ 44<br />

mg $82<br />

mg $98<br />

500 mg $98<br />

48 Orders Phone 800 854 34 7<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Fax 800 776 0999<br />

Web www.emdbiosciences.com/calbiochem


Protein Tyrosine Kinase (PTK) <strong>Inhibitor</strong>s, continued<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Phosphorylation/Dephosphorylation<br />

Product Cat. No. Comments Size Price<br />

Cucurbitacin I, Cucumis<br />

sativus L.<br />

Curcumin, Curcuma<br />

longa L.<br />

238590 (JSI-124)<br />

A cell-permeable, potent, and highly selective inhibitor of Janus kinase/signal<br />

transducer and activator of transcription 3 (JAK/STAT3) signaling pathway. Suppresses<br />

STAT3 tyrosine phosphorylation in v-Src-transformed NIH 3T3 cells and human lung<br />

adenocarcinoma A549 cells (IC 50 = 500 nM).<br />

239802 [1,7-Bis(4-hydroxy-3-methoxyphenyl)-1,6-heptadiene-3,5-dione]<br />

Inhibits the intrinsic kinase activity of EGFR. Induces apoptosis in both androgendependent<br />

and androgen-independent prostate cancer cells.<br />

Daidzein 251600 (4´,7-Dihydroxyisoflavone)<br />

Inactive analog of Genistein that is also reported to inhibit casein kinase II activity.<br />

Damnacanthal 251650 (3-Hydroxy-1-methoxyanthraquinone-2-aldehyde)<br />

Most potent and selective inhibitor of p56 lck tyrosine kinase and p56 lck<br />

autophosphorylation (IC 50 = 7 nM). Inhibition is competitive with respect to<br />

peptide binding site and mixed non-competitive with the ATP binding site.<br />

Daphnetin 268295 (7,8-Dihydroxy-2H-1-benzopyran-2-one; 7,8-Dihydroxycoumarin)<br />

A broad-spectrum inhibitor of protein kinases. Inhibits EGFR kinase (IC 50 = 7.67 mM),<br />

PKA (IC 50 = 9.33 mM), and PKC (IC 50 = 25 mM).<br />

5´-Deoxy-5´methylthioadenosine<br />

260585 (MeSAdo; MTA)<br />

Inhibits FGF-2 receptor tyrosine kinase and S49 cell-derived high affinity cAMP<br />

phosphodiesterase (K i = 62 mM) in vitro.<br />

DMBI 317200 {(Z)-3-[4-(Dimethylamino)benzylidenyl]indolin-2-one}<br />

<strong>Inhibitor</strong> of the tyrosine activity of b-PDGFR (IC 50 = 4 mM in PAC- cells) and<br />

FGFR (IC 50 = 5 mM).<br />

EGFR/ErbB-2 <strong>Inhibitor</strong> 324673 [4557W; 4-(4-Benzyloxyanilino)-6,7-dimethoxyquinazoline]<br />

A cell-permeable, potent, reversible, and ATP competitive inhibitor of EGFR and c-erbB2<br />

(IC 50 = 20 nM and 80 nM, respectively).<br />

Emodin 324694 (6-Methyl-1,3,8-trihydroxyanthraquinone)<br />

<strong>Inhibitor</strong> of p56 lck (IC 50 = 8.5 mM). Suppresses HER2/neu tyrosine kinase activity<br />

in HER2/neu overexpressing cancer cells.<br />

Erbstatin Analog 324930 (2,5-Dihydroxymethylcinnamate)<br />

Cell-permeable stable analog of Erbstatin. Competitive inhibitor of EGFR kinase activity<br />

(IC 50 = 780 nM). Inhibits the activation of v-Abl tyrosine kinase activity.<br />

Geldanamycin,<br />

Streptomyces<br />

hygroscopicus<br />

345805 <strong>Inhibitor</strong> of p60 c-src tyrosine kinase activity. Binds Hsp90 and induces degradation of<br />

tyrosine kinases.<br />

Genistein 345834 (4´,5,7-Trihydroxyisoflavone)<br />

A tyrosine kinase inhibitor that also blocks the autophosphorylation of EGFR kinase<br />

(IC 50 = 2.6 mM). Also acts as an inhibitor of p60 v-src (IC 50 = 25 mM).<br />

Genistin 345836 (Genistein, 7-O-b-D-Glucopyranoside)<br />

An inactive analog of the PTK inhibitor Genistein (Cat. No. 345834) and can be used as a<br />

negative control for Genistein. Reported to reduce bone loss in ovarectomized rats.<br />

GTP- 4564 371806 (3-Phenyl-1H-benzofuro[3,2-c]pyrazole; 1-Phenyl-3-H-8-oxa-2,3-diazacyclopenta[a]inden)<br />

A cell-permeable, potent, and specific inhibitor of class III receptor tyrosine kinases<br />

(IC = 300 nM for c-fms, c-kit, wt-FLT3, and ITD-FLT3; .0 mM for PDGFRb).<br />

50<br />

Herbimycin A,<br />

Streptomyces sp.<br />

mg $ 57<br />

00 mg $35<br />

25 mg $47<br />

mg $ 4<br />

0 mg $50<br />

50 mg $73<br />

0 mg $62<br />

mg $84<br />

50 mg $69<br />

mg $44<br />

00 mg $ 80<br />

20 mg<br />

50 mg<br />

$73<br />

$ 46<br />

5 mg $ 06<br />

5 mg $84<br />

375670 An inhibitor of p60 c-src (IC 50 = 900 nM). Reversibly binds to the thiol groups of the kinase. 00 mg $ 48<br />

HNMPA-(AM) 3 397100 (Hydroxy-2-naphthalenylmethylphosphonic Acid Trisacetoxymethyl Ester; Pro-drug II)<br />

Cell-permeable inhibitor of insulin receptor tyrosine kinase (IC 50 = 00 mM).<br />

IGF- R <strong>Inhibitor</strong>, PPP 407247 (Insulin-like Growth Factor-1 Receptor <strong>Inhibitor</strong>; Picropodophyllin)<br />

A cell-permeable, potent and specific inhibitor of IGF- R both in vitro<br />

(IC 50 = nM in cell-free kinase assay; 60 nM and < 50 nM for cell viability and<br />

receptor autophosphorylation, respectively, in melanoma cell lines) and in vivo<br />

(complete inhibition of IGF- R-dependent tumor cell growth at 20 mg/kg/ 2 hr s.c.<br />

in SCID mice) with minimum toxic effect (LD 50 > 500 mg/kg). Exhibits little effect<br />

towards IR, FGFR, PDGFR and EGFR.<br />

5 mg $ 3<br />

mg $95<br />

Technical Support<br />

Phone 800 628 8470<br />

E-mail calbiochem@emdbiosciences.com<br />

49


Phosphorylation/Dephosphorylation<br />

Product Cat. No. Comments Size Price<br />

JAK <strong>Inhibitor</strong> I 420099 {2-(1,1-Dimethylethyl)-9-fluoro-3,6-dihydro-7H-benz[h]-imidaz[4,5-f]isoquinolin-7-one}<br />

A potent inhibitor of Janus protein tyrosine Kinases (JAKs). Displays potent inhibitory<br />

activity against JAK (IC 50 = 5 nM for murine JAK ), JAK2 (IC 50 = nM), JAK3 (K i =<br />

5 nM), and Tyk2 (IC 50 = nM).<br />

N InSolution JAK<br />

<strong>Inhibitor</strong> I<br />

420097 {2-(1,1-Dimethylethyl)-9-fluoro-3,6-dihydro-7H-benz[h]-imidaz[4,5-f]isoquinolin-7-one}<br />

A 0 mM (500 mg/ 62 ml) solution of JAK <strong>Inhibitor</strong> I (Cat. No. 420099) in DMSO.<br />

N JAK2 <strong>Inhibitor</strong> II 420132 (1,2,3,4,5,6-Hexabromocyclohexane)<br />

A cell-permeable hexabromocyclohexane compound that acts as a specific and direct<br />

inhibitor of JAK2 autophosphorylation (maximal inhibition at 50 mM in BSC-40 cells<br />

overexpressing JAK2).<br />

JAK3 <strong>Inhibitor</strong> I 420101 [4-(4´-Hydroxyphenyl)amino-6,7-dimethoxyquinazoline; WHI-P131]<br />

A specific inhibitor of JAK3 (IC 50 = 78 mM). Does not affect the activity of JAK , JAK2,<br />

ZAP/Syk, or Src tyrosine kinases.<br />

JAK3 <strong>Inhibitor</strong> II 420104 {4-[(3´-Bromo-4´-hydroxyphenyl)amino]-6,7-dimethoxyquinazoline; WHI-P154}<br />

A potent, cell-permeable inhibitor of JAK3 that is reported to kill glioblastoma cells<br />

(IC 50 = 8 3 nM).<br />

JAK3 <strong>Inhibitor</strong> III 420106 [4-(3´,5´-Dibromo-4-hydroxyphenyl)amino-6,7-dimethoxyquinazoline; WHI-P97]<br />

A potent and specific inhibitor of JAK3 (IC 50 = mM).<br />

JAK3 <strong>Inhibitor</strong> IV 420121 [2-Naphthyl-(N-isopropyl,N-benzyl)-b-aminoethylketone, HCI; ZM 39923]<br />

A potent and selective ATP-competitive inhibitor of JAK3 (pIC 50 = 7. ). Weakly inhibits<br />

other tyrosine kinases (pIC 50 = 5.6 for EGF-R; 4.4 for JAK ). In neutral buffer undergoes<br />

a retro-Michael breakdown (t /2 = 36 min at 25˚C, pH 7.43) to the active analog 2-naphthylvinyl<br />

ketone (Cat. No. 420 22) [pIC 50 = 6.8 for JAK3; 5.0 for EGF-R; 4.7 for JAK ].<br />

JAK3 <strong>Inhibitor</strong> V 420122 [(2-Naphthylvinyl Ketone); ZM 449829]<br />

A breakdown product of JAK3 <strong>Inhibitor</strong>-IV (Cat. No. 420 2 ) with similar inhibitory<br />

activities (pIC 50 = 6.8 for JAK3; 5.0 for EGF-R; 4.7 for JAK ). Also inhibits STAT-5<br />

phosphorylation and T-cell proliferation.<br />

JAK3 <strong>Inhibitor</strong> VI 420126 A cell-permeable, potent inhibitor of JAK3 (IC 50 = 27 nM). Binds to the enzyme active<br />

site and prevents IL-2-induced cellular phosphorylation of JAK3 and STAT5.<br />

JAK3 <strong>Inhibitor</strong>, Negative<br />

Control<br />

420112 (4-Phenylamino-6,7-dimethoxyquinazoline; WHI-P258)<br />

A useful negative control compound for JAK3 inhibitors.<br />

Lavendustin A 428150 {5-Amino-[(N-2,5-dihydroxybenzyl)-N´-2-hydroxybenzyl]salicylic Acid; RG14355}<br />

A potent inhibitor of EGFR kinase (IC 50 = nM) and p60 c-src (IC 50 = 500 nM).<br />

Lavendustin B 428160 [5-Amino-(N,N´-bis-2-hydroxybenzyl)salicylic Acid]<br />

A negative control for Lavendustin A (IC 50 = .3 mM for EGFR kinase).<br />

Lavendustin C 234450 [Compound 5; 5-(N-2´,5´-Dihydroxybenzyl)aminosalicylic Acid]<br />

Potent inhibitor of p60c-src (IC = 200 nM) and Ca 50 2+ /calmodulin-dependent kinase II<br />

(IC = 200 nM).<br />

50<br />

N Lck <strong>Inhibitor</strong> 428205 A cell-permeable pyrrolopyrimidine compound that acts as a potent, selective and ATPcompetitive<br />

inhibitor of Lck (IC at 5 mM of ATP = < nM, 2 nM, 70 nM, .57 mM, and<br />

50<br />

.98 mM for Lck Y 64-509 394 , lckcd pY394 , src, kdr, and tie-2, respectively; IC at mM of<br />

50<br />

ATP = 6 nM, 66 nM, 26 nM, 420 nM, and 5. 8 mM for Lck Y 64-509 394 , blk, fyn, lyn, and<br />

csk, respectively). Only minimally affects the activities of other kinases (IC = 3.2 mM,<br />

50<br />

> 33 mM, > 50 mM, and > 50 mM for EGFR, PKC, CDC2/B, and ZAP-70, respectively).<br />

N<br />

Protein Tyrosine Kinase (PTK) <strong>Inhibitor</strong>s, continued<br />

LFM-A 435301 [a-Cyano-b-hydroxy-b-methyl-N-(3-fluorophenyl)propenamide]<br />

A useful negative control (IC 50 ≥ 454 mM) for LFM-A 3.<br />

LFM-A 2 435302 {a-Cyano-b-hydroxy-b-methyl-N-[4-(trifluoromethoxy)phenyl]propenamide}<br />

A potent and specific inhibitor of EGFR kinase (IC 50 = .7 mM).<br />

LFM-A 3 435300 [a-Cyano-b-hydroxy-b-methyl-N-(2,5-dibromophenyl)propenamide]<br />

A potent and specific inhibitor of Bruton’s tyrosine kinase (BTK; IC 50 = 7.2 mM for human<br />

BTK in vitro and IC 50 = 2.5 mM for recombinant BTK).<br />

Met Kinase <strong>Inhibitor</strong> 448101 (3Z)-N-(3-Chlorophenyl)-3-((3,5-dimethyl-4-((4-methylpiperazin-1-yl)carbonyl)-1Hpyrrol-2-yl)methylene)-N-methyl-2-oxo-2,3-dihydro-1H-indole-5-sulfonamide;<br />

SU11274<br />

A cell-permeable pyrrole indolinone compound that acts as a potent, reversible, and<br />

ATP-competitive inhibitor of Met kinase activity (IC = 20 nM).<br />

50<br />

500 mg $83<br />

500 mg $83<br />

25 mg $88<br />

5 mg $ 8<br />

5 mg $ 50<br />

mg $ 27<br />

0 mg $ 90<br />

0 mg $ 68<br />

5 mg $ 5<br />

50 Orders Phone 800 854 34 7<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Fax 800 776 0999<br />

Web www.emdbiosciences.com/calbiochem<br />

500 mg<br />

mg<br />

500 mg<br />

mg<br />

500 mg<br />

mg<br />

$76<br />

$ 27<br />

mg $ 7<br />

mg $ 7<br />

mg $62<br />

mg $82<br />

$44<br />

$75<br />

$ 42<br />

$230<br />

5 mg $98<br />

mg $85


Protein Tyrosine Kinase (PTK) <strong>Inhibitor</strong>s, continued<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Phosphorylation/Dephosphorylation<br />

Product Cat. No. Comments Size Price<br />

Oxindole I 499600 [3-(1H-Pyrrol-2-ylmethylene)-1,3-dihydroindol-2-one]<br />

A potent and specific inhibitor of VEGFR kinase Flk- (IC 50 = 390 nM).<br />

PD 53035 234490 {AG 1517; 4-[(3-Bromophenyl)amino]-6,7-dimethoxyquinazoline; Compound 32; SU 5271}<br />

An extremely potent and specific inhibitor of EGFR kinase activity (IC 50 = 25 pM).<br />

0 mg $64<br />

mg $85<br />

N InSolution PD 53035 234491 A 0 mM (500 mg/ 39 ml) solution of PD 53035 (Cat. No. 234490) in DMSO. 500 mg $85<br />

PD 56273 513032 {6-Amino-4-[(3-bromophenyl)amino]-7-(methylamino)quinazoline}<br />

A potent inhibitor of EGFR kinase activity (IC 50 = 690 pM).<br />

PD 58780 513035 {4-[(3-Bromophenyl)amino]-6-(methylamino)-pyrido[3,4-d]pyridimine}<br />

A potent inhibitor of the EGFR tyrosine kinase activity (80 pM). Also inhibits heregulinstimulated<br />

autophosphorylation in SK-BR-3 (IC 50 = 49 nM) and MDA-MB-453<br />

(IC 50 = 52 nM) breast carcinomas.<br />

PD 68393 513033 {4-[(3-Bromophenyl)amino]-6-acrylamidoquinazoline}<br />

A potent, cell-permeable, irreversible, and selective inhibitor of EGFR kinase activity<br />

(IC 50 = 700 pM).<br />

PD 74265 513040 {4-[(3-Bromophenyl)amino]-6-propionylamidoquinazoline}<br />

A potent, cell-permeable, reversible, and selective inhibitor of EGFR kinase activity<br />

(IC 50 = 450 pM).<br />

PDGF Receptor Tyrosine<br />

Kinase <strong>Inhibitor</strong> I<br />

PDGF Receptor Tyrosine<br />

Kinase <strong>Inhibitor</strong> II<br />

PDGF Receptor Tyrosine<br />

Kinase <strong>Inhibitor</strong> III<br />

521230 [D-64406; (5-Hydroxy-1H-2-indolyl)(1H-2-indolyl)-methanone]<br />

A cell-permeable bis( H-2-indolyl)- -methanone compound that acts as a highly<br />

selective and ATP-competitive inhibitor of PDGFR kinase (IC 50 = 200 nM in Swiss 3T3<br />

cells for PDGFR; 90 nM in vitro and 200 nM in PAE cells for PDGFb-R; mM for<br />

PDGFa-R). Also reported to inhibit Fms-like tyrosine kinase 3 (Flt3) activity<br />

(IC 50 = 300 nM for hPDGFb-R-mFlt3 and 00 nM in EOL- cells).<br />

521231 {(5-Butanoate-1H-2-indolyl)(1H-2-indolyl)-methanone; D-65476;<br />

[2-(1H-2-Indolylcarbonyl)-1H-5-indolyl]butanoate}<br />

Prodrug form of Platelet Derived Growth Factor Receptor Tyrosine Kinase <strong>Inhibitor</strong> I<br />

(Cat. No. 52 230) that acts as a highly selective, cell-permeable, ATP-competitive inhibitor<br />

of PDGFR kinase (IC 50 = . mM, Swiss 3T3 cells). A potent inhibitor of Fms-like tyrosine<br />

kinase 3 (Flt3) activity (IC 50 = 6.2 mM for PDGFRb-mFlt3 and 50 nM in EOL- cells).<br />

521232 [4-(6,7-Dimethoxy-4-quinazolinyl)-N-(4-phenoxyphenyl)-1-piperazinecarboxamide]<br />

A cell-permeable, potent, selective, ATP-competitive inhibitor of PDGF receptor family<br />

of tyrosine kinases (IC 50 = 50 nM for a-PDGFR; 80 nM for b-PDGFR; 50 nM for c-Kit;<br />

230 nM for Flt3).<br />

Piceatannol 527948 (trans-3,3´,4,5´-Tetrahydroxystilbene)<br />

<strong>Inhibitor</strong> of p72 Syk , a non-receptor tyrosine kinase (IC 50 = 0 mM).<br />

PP Analog 529579 {4-Amino-1-tert-butyl-3-(1´-naphthyl)pyrazolo[3,4-d]pyrimidine}<br />

A potent, cell-permeable, and selective inhibitor of Src-family tyrosine kinases. Displays<br />

high selectivity for 338G v-Src (IC 50 = .5 nM) with respect to the wild-type v-Src<br />

(IC 50 = .0 mM). Also inhibits wild-type Fyn (IC 50 = 600 nM). Not available for sale in the<br />

United States.<br />

N PP Analog II, NM-<br />

PP<br />

529581 {4-Amino-1-tert-butyl-3-(1´-naphthylmethyl)pyrazolo[3,4-d]pyrimidine; Mutant Kinases<br />

<strong>Inhibitor</strong> II; NM}<br />

A cell-permeable PP analog (Cat. No. 529479) that acts as a potent and selective<br />

ATP-competitive inhibitor of mutant kinases over wild-type (IC = 3.2 nM for T339G,<br />

50<br />

c-Fyn-as vs. .0 mM for c-Fyn; 4.3 nM for I338G, v-src-as vs. 28 mM for v-src; 5 nM<br />

for F80G, CDK2-as vs. 29 mM for CDK2; 8 nM for F89G, CAMK IIa-as vs. 24 mM for<br />

CaMKII; 20 nM for T3 5A, c-Abl-as2 vs. 3.4 mM for c-Abl). Shown to activate mutants<br />

of Ire , a transmembrane kinase.<br />

PP2 529573 {AG 1879; 4-Amino-5-(4-chlorophenyl)-7-(t-butyl)pyrazolo[3,4-d]pyrimidine}<br />

A potent and selective inhibitor of the Src family of tyrosine kinases. Inhibits p56 lck<br />

(IC 50 = 4 nM), p59 fynT (IC 50 = 5 nM), and Hck (IC 50 = 5 nM).<br />

mg $ 04<br />

500 mg $ 07<br />

mg $ 04<br />

mg $93<br />

mg $ 37<br />

mg $ 57<br />

mg $ 05<br />

mg $4<br />

mg —<br />

mg $82<br />

mg $92<br />

InSolution PP2 529576 A 0 mM ( mg/33 ml) solution of PP2 (Cat. No. 529573) in DMSO. mg $97<br />

PP3 529574 (4-Amino-7-phenylpyrazol[3,4-d]pyrimidine)<br />

A negative control compound for PP2. Shown to inhibit EGFR kinase (IC 50 = 2.7 mM).<br />

mg $57<br />

Technical Support<br />

Phone 800 628 8470<br />

E-mail calbiochem@emdbiosciences.com<br />

5


Phosphorylation/Dephosphorylation<br />

Protein Tyrosine Kinase (PTK) <strong>Inhibitor</strong>s, continued<br />

Product Cat. No. Comments Size Price<br />

Radicicol,<br />

Diheterospora<br />

chlamydosporia<br />

553400 <strong>Inhibitor</strong> of p60 v-src kinase activity (IC 50 = 8.2 mM). Also inhibits tyrosine<br />

phosphorylation of p53/56 lyn in LPS-stimulated macrophages.<br />

RG- 3022 554725 [a-(3´-Pyridyl)-(3,4-dimethoxy)cinnamonitrile]<br />

A selective inhibitor of EGFR kinase activity. Inhibits epidermal growth factor-<br />

stimulated HER 4 cell proliferation (IC 50 = mM) and tumor growth in vivo.<br />

Src Kinase <strong>Inhibitor</strong> I 567805 [4-(4´-Phenoxyanilino)-6,7-dimethoxyquinazoline]<br />

A potent, selective, dual site, competitive inhibitor of Src tyrosine kinase (IC 50 = 44 nM<br />

and 88 nM for Src and Lck, respectively). Shown to simultaneously interact with both<br />

the ATP- and peptide-binding sites. Inhibits VEGFR2 and c-fms tyrosine kinases only at<br />

higher concentrations (IC 50 = 320 nM and 30 mM, respectively).<br />

Src Kinase <strong>Inhibitor</strong> II 567806 A potent, selective, and ATP-competitive inhibitor of Src family tyrosine kinases<br />

(IC 50 = .2 mM for human recombinant Csk).<br />

ST638 567790 [a-Cyano-(3-ethoxy-4-hydroxy-5-phenylthiomethyl)cinnamide]<br />

Protein tyrosine kinase inhibitor (IC 50 = 370 nM) that also inhibits HGF-induced MAP<br />

kinase activation in hepatocytes.<br />

SU 498 572888 {(E)-3-(3,5-Diisopropyl-4-hydroxyphenyl)-2-[(3-phenyl-n-propyl)<br />

amino-carbonyl]acrylonitrile}<br />

A potent and selective inhibitor of Flk- kinase (IC 50 = 700 nM), a vascular endothelial<br />

growth factor (VEGF) receptor kinase. Also reduces the expression of ets-1, a<br />

transcription factor stimulated by VEGF. Has only a weak inhibitory effect on PDGFreceptor<br />

(IC 50 > 50 mM), EGF-receptor (IC 50 > 00 mM), and HER2 (IC 50 > 00 mM).<br />

SU4984 572625 {3[4-(1-Formylpiperazin-4-yl)benzylidenyl]-2-indolinone}<br />

<strong>Inhibitor</strong> of FGFR tyrosine kinase activity (IC 50 = 0–20 mM in the presence of mM<br />

ATP). Also inhibits aFGF-induced phosphorylation of ERK and ERK2 and tyrosine<br />

phosphorylation of PDGF and insulin receptors. Not available for sale in the United<br />

States.<br />

SU5402 572630 {3-[3-(2-Carboxyethyl)-4-methylpyrrol-2-methylidenyl]-2-indolinone}<br />

Inhibits the tyrosine kinase activity of fibroblast growth factor receptor (FGFR );<br />

(IC 50 = 0–20 mM in the presence of mM ATP). Also inhibits aFGF-induced tyrosine<br />

phosphorylation of ERK and ERK2 (IC 50 = 0–20 mM). In contrast to SU4984<br />

(Cat. No. 572625), SU5402 is only a weak inhibitor of tyrosine phosphorylation of the<br />

PDGF receptor and does not inhibit phosphorylation of the insulin receptor. Does not<br />

inhibit the kinase activity of the EGF receptor. Not available for sale in the United States.<br />

SU56 4 572632 {5-Chloro-3-[(3,5-dimethylpyrrol-2-yl)methylene]-2-indolinone}<br />

Potent inhibitor of VEGFR kinase, Flk- (IC 50 = .2 mM), and PDGFR kinase<br />

(IC 50 = 2.9 mM). Not available for sale in the United States.<br />

500 mg $75<br />

5 mg $ 03<br />

mg $ 03<br />

5 mg $ 52<br />

5 mg $ 28<br />

5 mg $ 23<br />

mg —<br />

500 mg —<br />

mg —<br />

SU6656 572635 A potent Src family kinase inhibitor. Inhibits Src (IC = 280 nM) and closely related<br />

50<br />

kinases Fyn (IC = 70 nM) and Yes (IC = 20 nM). Also inhibits Lyn (IC = 30 nM),<br />

50 50 50<br />

but only weakly inhibits Lck (IC = 688 mM) and PDGFR (IC > 0 mM).<br />

50 50<br />

mg $ 27<br />

N InSolution SU6656 572636 A 0 mM (500 mg/ 35 ml) solution of SU6656 (Cat. No. 572635) in DMSO. 500 mg $84<br />

N SU 652 572660 {5-[(Z)-(5-Chloro-2-oxo-1,2-dihydro-3H-indol-3-ylidene)methyl]-N-<br />

[2-(diethylamino)ethyl]-2,4-dimethyl-1H-pyrrole-3-carboxamide}<br />

A cell-permeable, pyrrole-indolinone compound that acts as a potent and ATPcompetitive<br />

tyrosine kinase receptor and angiogenic inhibitor that exhibits greater<br />

selectivity for PDGFRb (IC 50 = 3 nM), VEGFR2 (IC 50 = 27 nM), FGFR (IC 50 = 70 nM), and<br />

Kit family members (IC 50 = ~ 0–500 nM) over EGFR (IC 50 = > 20 mM).<br />

Syk <strong>Inhibitor</strong> 574711 [3-(1-Methyl-1H-indol-3-yl-methylene)-2-oxo-2,3-dihydro-1H-indole-5-sulfonamide;<br />

Spleen Tyrosine Kinase <strong>Inhibitor</strong>]<br />

A cell-permeable, potent inhibitor of Syk (IC 50 = 4 nM).<br />

N Syk <strong>Inhibitor</strong> II 574712 2-(2-Aminoethylamino)-4-(3-trifluoromethylanilino)-pyrimidine-5-carboxamide,<br />

Dihydrochloride<br />

A cell-permeable pyrimidine-carboxamide compound that acts as a potent, selective<br />

and ATP-competitive inhibitor of Syk (IC 50 = 4 nM), and blocks 5-HT release from<br />

stimulated RBL-2H3 cells (IC 50 = 460 nM).<br />

500 mg $ 42<br />

5 mg $ 05<br />

mg $75<br />

52 Orders Phone 800 854 34 7<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Fax 800 776 0999<br />

Web www.emdbiosciences.com/calbiochem


Protein Tyrosine Kinase (PTK) <strong>Inhibitor</strong>s, continued<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Phosphorylation/Dephosphorylation<br />

Product Cat. No. Comments Size Price<br />

TGF-b RI Kinase<br />

<strong>Inhibitor</strong><br />

N TGF-b RI Kinase<br />

<strong>Inhibitor</strong> II<br />

616451 {ALK5 <strong>Inhibitor</strong> I; [3-(Pyridin-2-yl)-4-(4-quinonyl)]-1H-pyrazole; TbR-I <strong>Inhibitor</strong>;<br />

Transforming Growth Factor-b Type I Receptor Kinase <strong>Inhibitor</strong>}<br />

A cell-permeable, potent, selective, ATP-competitive inhibitor of TGF-b type I receptor<br />

tyrosine kinase (IC 50 = 5 nM). Displays ~ 5-fold greater selectivity over p38a MAP<br />

kinase (IC 50 = 740 nM).<br />

616452 [ALK5 <strong>Inhibitor</strong> II; 2-(3-(6-Methylpyridin-2-yl)-1H-pyrazol-4-yl)-1,5-naphthyridine;<br />

Transforming Growth Factor-b Type I Receptor Kinase <strong>Inhibitor</strong> II]<br />

A cell-permeable naphthyridinyl pyrazolo compound that acts as a potent, selective,<br />

and ATP-competitive inhibitor of TGF-b type I receptor (ALK5; IC 50 = 23 nM, 4 nM, and<br />

8 nM for ALK5 binding, ALK5 auto-phosphorylation and TGF-b cellular assay in HepG2<br />

cells, respectively). Minimally affects a panel of nine closely related kinases including<br />

p38 MAPK at IC 50 > 6 mM.<br />

2´-Thioadenosine 589400 (PD 157432)<br />

A potent, selective, and irreversible inhibitor of the ErbB subfamily of protein tyrosine<br />

kinases. Inactivates ErbB by modifying Cys 797 at the active site. Also inhibits ErbB2<br />

(IC 50 = 45 mM).<br />

(-)-Terreic Acid,<br />

Synthetic<br />

581810 {(1R,6S)-3-Hydroxy-4-methyl-7-oxabicyclo[4.1.0]hept-3-ene-2,5-dione}<br />

A cell-permeable, selective inhibitor of Bruton’s tyrosine kinase (BTK; IC 50 = 0 mM<br />

and 3 mM for the basal and activation levels), both in vitro and in vivo.<br />

N TrkA <strong>Inhibitor</strong> 648450 An oxindole compound that acts as a potent and highly selective inhibitor of TrkA<br />

(IC 50 = 6 nM), presumably by targeting the ATP-binding pocket of the kinase. Shown to<br />

exhibit ≥ 00-fold selectivity over c-fms, Cdk , Cdk2, Itk, JNK-3, p38, PDHK4, c-Raf ,<br />

Src, UL 3, and VEGFR2.<br />

TX- 23 655200 [2-((3,5-di-tert-Butyl-4-hydroxyphenyl)-methylene)-4-cyclopentene-1,3-dione]<br />

A cell-permeable inhibitor for Src, eEF2 kinase, and PKA (IC 50 = 2.2, 3.2, and 9.6 mM,<br />

respectively). Inhibits EGFR kinase and PKC only at much higher concentrations<br />

(IC 50 = 320 mM).<br />

N Tyrene CR4 655230 A cell-permeable hydroxystryrylacrylonitrile compound that potently inhibits the kinase<br />

activities of JAK2 and Bcr-Abl (IC 50 ~ 00–600 nM and 500–700 nM, respectively), and<br />

displays selectivity over other related kinases, namely, Btk, Lck, Lyn, Src, Syk, and<br />

ZAP-70 (IC 50 > 5 mM).<br />

Tyrosine-Specific<br />

Protein Kinase <strong>Inhibitor</strong><br />

VEGF Receptor Tyrosine<br />

Kinase <strong>Inhibitor</strong><br />

N VEGF Receptor Tyrosine<br />

Kinase <strong>Inhibitor</strong> II<br />

VEGF Receptor 2 Kinase<br />

<strong>Inhibitor</strong> I<br />

VEGF Receptor 2 Kinase<br />

<strong>Inhibitor</strong> II<br />

VEGF Receptor 2 Kinase<br />

<strong>Inhibitor</strong> III<br />

N InSolution VEGF<br />

Receptor 2 Kinase<br />

<strong>Inhibitor</strong> III<br />

657015 (p60 v-src 137-157 <strong>Inhibitor</strong> Peptide; VAPSDSIQAEEWYFGKITRRE)<br />

Inhibits p60 v-src (IC 50 = 7.5 mM) and epidermal growth factor receptor kinase.<br />

676475 {4-[(4´-Chloro-2´-fluoro)phenylamino]-6,7-dimethoxyquinazoline}<br />

A potent inhibitor of vascular endothelial growth factor (VEGF) receptor (Flt and KDR)<br />

tyrosine kinase activity (IC 50 = 2.0 mM and 00 nM for Flt and KDR, respectively).<br />

676481 {N-(4-Chlorophenyl)-2-[(pyridin-4-ylmethyl)amino]benzamide}<br />

Shown to potently inhibit the kinase activities of KDR, Flt- , and c-Kit (IC 50 = 20 nM,<br />

80 nM, and 240 nM, respectively), and minimally inhibit c-Src and EGF-R activities<br />

(IC 50 = 7.0 mM and 7.3 mM). Further, inactive towards the inhibition of CDK- , c-Met,<br />

IGF- R, and PKA (IC 50 > 0 mM).<br />

676480 {(Z)-3-[(2,4-Dimethyl-3-(ethoxycarbonyl)pyrrol-5-yl)methylidenyl]indolin-2-one}<br />

A highly selective, cell-permeable indolin-2-one class of receptor tyrosine kinase<br />

inhibitor (IC 50 = 70 nM) for murine vascular endothelial growth factor receptor 2 (VEGF-<br />

R2; KDR/Flk- ). The inhibition is suggested to be competitive with respect to ATP.<br />

676485 [(Z)-5-Bromo-3-(4,5,6,7-tetrahydro-1H-indol-2-ylmethylene)-1,3-dihydroindol-2-one]<br />

A cell-permeable receptor tyrosine kinase (RTK) inhibitor [IC 50 = 70 nM for VEGF-R2<br />

(KDR/Flk- ), 920 nM for PDGF-Rb, 4.92 mM for p60 c-src , and 3.3 mM for FGF-R ].<br />

The inhibition is suggested to be competitive with respect to ATP.<br />

676487 {3-[(2,4-Dimethylpyrrol-5-yl)methylidene]-indolin-2-one; SU5416}<br />

A cell-permeable, selective, ATP-competitive inhibitor of VEGF-R (KDR/Flk- ) and<br />

PDGFR kinases (IC 50 = mM and 20 mM, respectively in NIH-3T3 cells overexpressing<br />

Flk- ; K m = 530 nM for ATP).<br />

676498 A 0 mM (500 mg/2 0 ml) solution of VEGF Receptor 2 Kinase <strong>Inhibitor</strong> III<br />

(Cat. No. 676487) in DMSO.<br />

5 mg $ 05<br />

mg $98<br />

2 mg $ 29<br />

2 mg $ 03<br />

mg $ 00<br />

0 mg $90<br />

5 mg $82<br />

500 mg $204<br />

mg $85<br />

5 mg $ 29<br />

mg $99<br />

mg $99<br />

mg $ 8<br />

500 mg $73<br />

Technical Support<br />

Phone 800 628 8470<br />

E-mail calbiochem@emdbiosciences.com<br />

53


Phosphorylation/Dephosphorylation<br />

Protein Tyrosine Kinase (PTK) <strong>Inhibitor</strong>s, continued<br />

Product Cat. No. Comments Size Price<br />

VEGF Receptor 2 Kinase<br />

<strong>Inhibitor</strong> IV<br />

N VEGF Receptor 2 Kinase<br />

<strong>Inhibitor</strong> V, ZM32388<br />

VEGF Receptor 3 Kinase<br />

<strong>Inhibitor</strong>, MAZ5<br />

N VEGF Receptor Tyrosine<br />

Kinase <strong>Inhibitor</strong> II<br />

676489 {KDR/Flk-1 Kinase <strong>Inhibitor</strong> IV; 3-(3-Thienyl)-6-(4-methoxyphenyl)pyrazolo<br />

[1,5-a]pyrimidine}<br />

A potent, ATP-competitive inhibitor of the kinase activity VEGF receptor-2 (VEGFR-2;<br />

KDR/Flk- ) (IC 50 = 9 nM). Displays ~2-fold greater selectivity for VEGFR-2 compared to<br />

platelet derived growth factor receptor b (PDGFRb) and 0-fold selectivity compared to<br />

VEGFR- (Flt- ) and VEGFR-3 (Flt-4).<br />

676497 [5-((7-(Benzyloxy)quinazolin-4-yl)amino)-4-fluoro-2-methylphenol; KDR/Flk-1 <strong>Inhibitor</strong> V]<br />

A cell-permeable anilinoquinazolino compound that acts as a potent and reversible<br />

inhibitor of VEGFR-2 (KDR/Flk- ; IC 50 < 2 nM) with excellent selectivity over VEGFR-<br />

and many other receptor tyrosine kinases (IC 50 > 50 mM for VEGFR- , EGFR, ErbB2,<br />

FGFR , HGFR, and PDGFRb).<br />

676492 [3-(4-Dimethylamino-naphthalen-1-ylmethylene)-1,3-dihydro-indol-2-one; MAZ51]<br />

A cell-permeable, ATP-competitive inhibitor of VEGFR kinase. At low concentrations<br />

(5 mM), reported to specifically block VEGF-C and VEGF-D-induced phosphorylation<br />

of VEGFR-3, but not VEGFR-2, in PAE cells. Reported to partially block VEGFR-2<br />

phosphorylation only at higher concentrations (50 mM).<br />

676481 {N-(4-Chlorophenyl)-2-[(pyridin-4-ylmethyl)amino]benzamide}<br />

Shown to potently inhibit the kinase activities of KDR, Flt- and c-Kit (IC 50 = 20 nM,<br />

80 nM, and 240 nM, respectively), and minimally inhibit c-Src and EGF-R activities<br />

(IC 50 = 7.0 mM and 7.3 mM). Further, inactive towards the inhibition of CDK- , c-Met,<br />

IGF- R, and PKA (IC 50 > 0 mM).<br />

Src Family Protein Tyrosine Kinase <strong>Inhibitor</strong> Set<br />

A set of 4 vials. Each set contains 20 mg of Genistein (Cat. No. 345834),<br />

00 mg of Herbimycin A, Streptomyces sp. (Cat. No. 375670), and mg<br />

each of PP2 (Cat. No. 529573) and PP3 (Cat. No. 529574).<br />

Cat. No. 567816 1 set $284<br />

Tyrosine Kinase <strong>Inhibitor</strong> Set II<br />

mg $73<br />

500 mg $95<br />

0 mg $93<br />

5 mg $ 29<br />

A set of 5 vials. Each set contains 20 mg of Genistein (Cat. No. 345834),<br />

mg of PP2 (Cat. No. 529573), 5 mg of AG 490 (Cat. No. 65840 ), 5 mg<br />

of AG 296 (Cat. No. 65855 ), and 5 mg of AG 478 (Cat. No. 658552).<br />

Cat. No. 657021 1 set $273<br />

54 Orders Phone 800 854 34 7<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Fax 800 776 0999<br />

Web www.emdbiosciences.com/calbiochem


Raf Kinase <strong>Inhibitor</strong>s<br />

Raf kinases are a group of serine/threonine kinases<br />

that include A-Raf, B-Raf, and c-Raf1. A-Raf is<br />

abundant in urogenital tissues, B-Raf is predominantly<br />

expressed in neural tissue, and c-Raf1 is ubiquitous<br />

in its distribution. Raf kinases play an important<br />

role as extracellular signal-regulating kinases in cell<br />

differentiation, proliferation, and apoptosis. The three<br />

Raf proteins share a common structure consisting of an<br />

N-terminal regulatory domain and a C-terminal kinase<br />

domain. Each Raf has three conserved regions, CR1,<br />

CR2, and CR3. In the regulatory domain, CR1 contains<br />

a Ras-binding domain and a cysteine-rich domain, CR2<br />

is a serine/threonine-rich domain, and CR3 contains<br />

the kinase domain and is essential for Raf activity.<br />

The removal of the regulatory domain generates an<br />

oncogenic kinase.<br />

All three Raf proteins also share common mechanisms<br />

of activation and downstream effectors. They work at<br />

the entry point of the mitogen-activated protein kinase/<br />

extracellular-signal-regulated kinase (MAPK/ERK)<br />

pathway, a signaling module that connects cell-surface<br />

receptors and Ras proteins to nuclear transcription<br />

factors. They serve as downstream effectors of Ras<br />

signaling; however, the interaction between Ras and Raf<br />

alone is not sufficient for full activation of Raf kinases.<br />

Raf Kinase <strong>Inhibitor</strong>s<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Phosphorylation/Dephosphorylation<br />

Additional proteins and enzymes are required for full<br />

activation. 14-3-3 proteins are known to bind directly<br />

to Raf and their binding to Ser 621 of Raf-1 is essential<br />

to keep Raf in an inactive, but activation-competent<br />

confirmation. PKA is reported to phosphorylate Ser 43<br />

and Ser 621 and prevent the activation of Raf1. Inhibition<br />

of PKA has been linked to the growth factor-induced<br />

activation of c-Raf1. Ser 728 in the 14-3-3 binding<br />

region in B-Raf is also known to be a target for PKA<br />

phosphorylation.<br />

Abnormal activation of Raf signaling pathway is<br />

common in several type of cancers. Hence, there is<br />

a significant interest in the development of specific<br />

inhibitors that may reverse the progression of these<br />

tumors. These inhibitors may block the expression of Raf<br />

protein, block its interaction with Ras, or block its kinase<br />

activity.<br />

References:<br />

OíNeill, E., and Kolch, W. 2004. Br. J. Cancer. 90, 283.<br />

Bollag, G., et al. 2003. Curr. Opin. Investig. Drugs 4, 436.<br />

Chong, H., et al. 2003. Cell Signal. 15, 463.<br />

Kolch, W., et al. 2002. Expert Rev. Mol. Med. 25, .<br />

Product Cat. No. Comments Size Price<br />

Raf Kinase <strong>Inhibitor</strong> I 553008 {5-Iodo-3-[(3,5-dibromo-4-hydroxyphenyl)methylene]-2-indolinone}<br />

A potent c-Raf kinase inhibitor (IC 50 = 9 nM). Shows ≥ 00-fold selectivity for<br />

Raf kinase versus Cdk , Cdk2, c-src, ERK2, MEK, p38, Tie2, VEGFR2, and c-fms.<br />

N InSolution Raf<br />

Kinase <strong>Inhibitor</strong> I<br />

More online... www.calbiochem.com/inhibitors/Raf<br />

mg $99<br />

553003 A 0 mM (500 mg/96 ml) solution of Raf <strong>Inhibitor</strong> I (Cat. No. 553008) in DMSO. 500 mg $63<br />

ZM 336372 692000 {N-[5-(3-Dimethylaminobenzamido)-2-methylphenyl]-4-hydroxybenzamide}<br />

A potent, specific, and competitive inhibitor of c-Raf (IC 50 = 70 nM). Inhibits c-Raf with<br />

ten-fold greater potency compared to B-Raf. Has no significant effect on many other<br />

protein kinases tested (even at 50 mM) with the exception of SAPK2a/p38a<br />

(IC 50 = 2 mM) and SAPK2b/p38b2 (IC 50 = 2 mM).<br />

mg $ 27<br />

Technical Support<br />

Phone 800 628 8470<br />

E-mail calbiochem@emdbiosciences.com<br />

55


Phosphorylation/Dephosphorylation<br />

Rho Kinase (ROCK) <strong>Inhibitor</strong>s<br />

Rho kinase (ROCK), a serine/threonine kinase, serves<br />

as a target protein for small GTP-binding protein Rho.<br />

It serves as an important mediator of numerous cellular<br />

functions, including focal adhesions, motility, smooth<br />

muscle contraction, and cytokinesis. In smooth muscle,<br />

ROCK plays an important role in Ca 2+ sensitization and<br />

the control of vascular tone. It modulates the level of<br />

phosphorylation of the myosin II light chain of myosin<br />

II, mainly through inhibition of myosin phosphatase,<br />

and contributes to agonist-induced Ca 2+ sensitization in<br />

smooth muscle contraction.<br />

Rho kinase is found in two forms, ROCK 1 (ROCKb; p160-<br />

ROCK) and ROCK 2 (ROCKa). Both ROCK 1 and ROCK 2<br />

contain an amino-terminal catalytic kinase domain, a<br />

central coiled-coil domain of about 600 amino acids, and<br />

a carboxyl-terminal pleckstrin homology (PH) domain<br />

Rho Kinase (ROCK) <strong>Inhibitor</strong>s<br />

that is split by a cysteine-rich region. Rho/GTP interacts<br />

with the C-terminal portion of the central coiled-coil<br />

domain and activates the kinase activity of ROCK. Since<br />

the ROCK-mediated pathway plays important roles in<br />

vascular smooth muscle contraction, cell adhesion,<br />

and cell motility, it has gained importance in the<br />

pathogenesis of atherosclerosis. ROCK inhibitors are<br />

shown to suppress coronary artery spasms. A long-term<br />

inhibition of ROCK is reported to block the development<br />

of coronary arteriosclerotic lesions.<br />

References:<br />

Hu, E., and Lee, D. 2003. Curr. Opin. Investig. Drugs. 4, 065.<br />

Fukata, Y., et al. 200 . Trends Pharmacol. Sci. 22, 32.<br />

Eto, Y., et al. 2000. Am. J. Physiol. Heart Circ. Physiol. 278, H 744.<br />

Fujisawa, K., et al. 996. J. Biol. Chem. 271, 23022.<br />

Product Cat. No. Comments Size Price<br />

HA 077,<br />

Dihydrochloride<br />

371970 [Fasudil; (5-Isoquinolinesulfonyl)homopiperazine, 2HCl]<br />

A cell-permeable Ca 2+ antagonist that inhibits Rho-associated kinase, PKA<br />

(IC 50 = .6 mM), PKG (IC 50 = .6 mM), and MLCK (IC 50 = 3.6 mM).<br />

N Hydroxyfasudil 390602 [1-(1-Hydroxy-5-isoquinolinesulfonyl)homopiperazine, HCl; HA1100]<br />

Supplied as a 0 mM (2 mg/582 ml) solution in H 2 O. A cell-permeable hydroxylated<br />

metabolite of HA 077 (Fasudil; Cat. No. 37 970) that displays anti-anginal properties.<br />

Acts as an ATP-competitive and a reversible inhibitor of Rho-kinase (IC 50 ~0.9– .8 mM)<br />

with ~ 00-fold greater selectivity over MLCK and PKC. Reported to inhibit the induced<br />

Ca 2+ -sensitization of contraction both in vitro and in vivo.<br />

Rho-Kinase <strong>Inhibitor</strong> 555550 {H-1152; H-1152P; (S)-(+)-2-Methyl-1-[(4-methyl-5-isoquinolinyl)sulfonyl]<br />

homopiperazine, 2HCl; ROCK <strong>Inhibitor</strong>}<br />

N InSolution Rho Kinase<br />

<strong>Inhibitor</strong><br />

A cell-permeable, highly specific, potent, and ATP-competitive inhibitor of G-protein<br />

Rho-associated kinase (ROCK; K i = .6 nM).<br />

mg $84<br />

2 mg $88<br />

mg $ 65<br />

555552 A 0 mM (500 mg/ 28 ml) solution of Rho Kinase <strong>Inhibitor</strong> (Cat. No. 555550) in H 2 O. 500 mg $90<br />

Rho-Kinase <strong>Inhibitor</strong> II 555551 [N-(4-Pyridyl)-N´-(2,4,6-trichlorophenyl)urea]<br />

A potent, selective, and ATP-competitive inhibitor of Rho-associated protein kinase<br />

(ROCK; IC 50 = 200 nM).<br />

N Rho-Kinase <strong>Inhibitor</strong> III,<br />

Rockout<br />

More online... www.calbiochem.com/inhibitors/ROCK<br />

555553 [3-(4-Pyridyl)-1H-indole]<br />

A cell-permeable indolopyridine compound that acts as a selective, ATP-competitive<br />

inhibitor of Rho kinase activity with an IC 50 of 25 mM. Does not inhibit the activation of<br />

Rho kinase nor does it affect the in vitro activities of MLCK, PKC a , and SAPK2a/p38a.<br />

Shown to be 5-fold less potent than Y-27632 (Cat. No. 688000; IC 50 ~5 mM), and display<br />

a similar specificity profile as H-89 (Cat. No. 37 963).<br />

N Rho Kinase <strong>Inhibitor</strong> IV 555554 H-1152, Glycyl<br />

(S)-(+)-2-Methyl-4-glycyl-1-(4-methylisoquinolinyl-5-sulfonyl)homopiperazine, 2HCl<br />

A glycyl analog of Rho-Kinase <strong>Inhibitor</strong> (Cat. No. 555550) that inhibits ROCK with an<br />

improved selectivity (IC 50 = .8 nM, > 0 mM, > 0 mM, 3.26 mM, 2.35 mM, and 2.57 mM<br />

for ROCKII, PKA, PKC, PKG, Aurora A, and CaMKII, respectively).<br />

5 mg $ 32<br />

0 mg $88<br />

mg $ 55<br />

56 Orders Phone 800 854 34 7<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Fax 800 776 0999<br />

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Rho Kinase (ROCK) <strong>Inhibitor</strong>s, continued<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Phosphorylation/Dephosphorylation<br />

Product Cat. No. Comments Size Price<br />

Y-27632 688000 [(R)-(+)-trans-N-(4-Pyridyl)-4-(1-aminoethyl)-cyclohexanecarboxamide, 2HCl;<br />

ROCK <strong>Inhibitor</strong>]<br />

A highly potent, ATP-competitive, cell-permeable, selective inhibitor of Rho-<br />

associated protein kinase (K i = 40 nM for p 60 ROCK ). Also inhibits ROCK-II with<br />

almost equal potency.<br />

InSolution Y-27632 688001 A 5 mM (500 mg/296 ml) solution of Y-27632 (Cat. No. 688000) in H 2 O. 500 mg $75<br />

Sphingosine Kinase <strong>Inhibitor</strong>s<br />

Product Cat. No. Comments Size Price<br />

Sphingosine Kinase<br />

<strong>Inhibitor</strong><br />

D-erythro-Sphingosine,<br />

N,N-Dimethyl-<br />

TGF-b Receptor I Kinase <strong>Inhibitor</strong>s<br />

Product Cat. No. Comments Size Price<br />

TGF-b RI Kinase<br />

<strong>Inhibitor</strong><br />

TGF-b RI Kinase<br />

<strong>Inhibitor</strong> II<br />

567731 [2-(p-Hydroxyanilino)-4-(p-chlorophenyl) thiazole; SK <strong>Inhibitor</strong>]<br />

A cell-permeable disubstituted thiazole compound that acts as a potent, non-ATPcompetitive,<br />

and highly specific inhibitor of sphingosine kinase (IC 50 = 500 nM for<br />

GST-hSK). Does not affect the kinase activity of hERK2, hPI3K, or PKC a even at<br />

concentrations as high as 60 mM.<br />

616451 {ALK5 <strong>Inhibitor</strong> I; [3-(Pyridin-2-yl)-4-(4-quinonyl)]-1H-pyrazole; TbR-I <strong>Inhibitor</strong>;<br />

Transforming Growth Factor-b Type I Receptor Kinase <strong>Inhibitor</strong>}<br />

A cell-permeable, potent, selective, ATP-competitive inhibitor of TGF-b RI tyrosine kinase<br />

(IC 50 = 5 nM). Displays ~ 5-fold greater selectivity over p38a MAP kinase (IC 50 = 740nM).<br />

616452 [ALK5 <strong>Inhibitor</strong> II; 2-(3-(6-Methylpyridin-2-yl)-1H-pyrazol-4-yl)-1,5-naphthyridine;<br />

Transforming Growth Factor-b Type I Receptor Kinase <strong>Inhibitor</strong> II]<br />

A cell-permeable, potent, selective and ATP-competitive inhibitor of TGF-b type I receptor<br />

(ALK5; IC 50 = 23 nM, 4 nM, and 8 nM for ALK5 binding, ALK5 auto-phosphorylation and<br />

TGF-b cellular assay in HepG2 cells, respectively). Minimally affects a panel of 9 closely<br />

related kinases including p38 MAPK at IC 50 > 6 mM.<br />

mg<br />

5 mg<br />

$ 27<br />

$496<br />

0 mg $84<br />

310500 An inhibitor of sphingosine kinase. 5 mg $8<br />

5 mg $ 05<br />

mg $98<br />

Technical Support<br />

Phone 800 628 8470<br />

E-mail calbiochem@emdbiosciences.com<br />

57


Phosphorylation/Dephosphorylation<br />

Protein Phosphatase <strong>Inhibitor</strong>s<br />

Phosphorylation and dephosphorylation of structural<br />

and regulatory proteins are major intracellular control<br />

mechanisms in eukaryotes. Protein kinases transfer a<br />

phosphate from ATP to a specific protein, typically at<br />

serine, threonine, or tyrosine residues. Phosphatases<br />

remove the phosphoryl group and restore the protein<br />

to its original dephosphorylated state. Hence, the<br />

phosphorylation-dephosphorylation cycle can be<br />

regarded as a molecular "on-off" switch.<br />

Protein phosphatases (PPs) have been classified into<br />

three distinct categories: serine/threonine (Ser/Thr)specific,<br />

tyrosine-specific, and dual-specificity<br />

phosphatases. Based on biochemical parameters,<br />

substrate specificity, and sensitivity to various<br />

inhibitors, Ser/Thr protein phosphatases are divided<br />

into two major classes. Type I phosphatases, which<br />

include PP1, can be inhibited by two heat-stable<br />

proteins known as <strong>Inhibitor</strong>-1 (I-1) and <strong>Inhibitor</strong>-2 (I-<br />

2). They preferentially dephosphorylate the b-subunit<br />

of phosphorylase kinase. Type II phosphatases are<br />

subdivided into spontaneously active (PP2A), Ca 2+ -<br />

dependent (PP2B), and Mg 2+ -dependent (PP2C) classes<br />

of phosphatases. They are insensitive to heat-stable<br />

inhibitors and preferentially dephosphorylate the asubunit<br />

of phosphorylase kinase.<br />

Protein tyrosine phosphatases (PTPs) are relatively<br />

recent additions to the phosphatase family. They<br />

remove phosphate groups from phosphorylated tyrosine<br />

residues of proteins. PTPs display diverse structural<br />

features and play important roles in the regulation of<br />

cell proliferation, differentiation, cell adhesion and<br />

motility, and cytoskeletal function. They are either<br />

transmembrane receptor-like PTPs or cytosolic enzymes.<br />

Each PTP contains a highly conserved catalytic domain<br />

of about 240 residues that contains highly conserved<br />

arginine and cysteine residues at the catalytic domain.<br />

The diversity of PTPs is primarily due to the variety<br />

of non-catalytic regulatory sequences and targeting<br />

domains attached to both N- and C-termini.<br />

Another category of protein phosphatases is the dual<br />

specificity phosphatases (DSPs), which play a key role in<br />

the dephosphorylation of MAP kinases. Hence, they are<br />

also termed as MAP kinase phosphatases (MKPs). On the<br />

basis of predicted structures, MKPs have been divided<br />

into three subgroups. Group I contains DSP1, DSP2,<br />

DSP4, and DSP5; group II enzymes are DSP6, DSP7,<br />

DSP9, and DSP10; and group III consists of DSP8 and<br />

DSP16. All the DSPs share strong amino-acid sequence<br />

homology in their catalytic domains. The catalytic<br />

domain contains a highly conserved consensus sequence<br />

DX 26 (V/L)X(V/ I)HCXAG(I/V) SRSXT(I/V)XXAY(L/I)M,<br />

where X could be any amino acid. The three underlined<br />

amino acids are reported to be essential for the catalytic<br />

activity of DSPs. The cysteine is required for the<br />

nucleophilic attack on the phosphorus of the substrate<br />

and the formation of the thiol-phosphate intermediate.<br />

The conserved arginine binds the phosphate group<br />

of phosphotyrosine or phosphothreonine, enabling<br />

transition-state stabilization, and the aspartate enhances<br />

catalysis by protonating oxygen on the departing<br />

phosphate group. All DSPs contain two conserved<br />

regions, known as the CH2 domains, at their amino<br />

terminus, which are involved in substrate binding. In<br />

addition, they contain a MAP kinase-docking site at the<br />

amino terminus that consists of a cluster of positively<br />

charged amino acids. The corresponding docking site<br />

on MAP kinases consists of negatively charged residues<br />

indicating that electrostatic interactions are involved in<br />

binding of MAP kinases and MKPs. The group III DSPs<br />

also have an extended carboxy terminus containing<br />

PEST sequences (abundant in proline, glutamate, serine<br />

and threonine) that are commonly found in rapidly<br />

degrading proteins. Removal of PEST sequences results<br />

in their stabilization.<br />

References:<br />

ATP ADP<br />

Stocker, A.W. 2005. J. Endocrinol. 185, 9.<br />

Faroog, A., and Zhou, M.M. 2004. Cell Signal. 16, 769.<br />

Bollen, M., and Beullens, M. 2002. Trends Cell Biol. 12, 38.<br />

Goldstein, B.J. 2002. J. Clin. Endocrinol. Metab. 87, 2474.<br />

Klumpp, S., and Krieglstein J. 2002. Curr. Opin. Pharmacol. 2, 458.<br />

Berndt, N. 999. Front. Biosci. 4, 22.<br />

Oliver, C.J., and Shenolikar, S. 998. Front. Biosci. 3, D96 .<br />

Theodosiou, A., and Ashworth, A. 2002. Genome Biol. 3, 3009. .<br />

Neel, B.G., and Tonks, N.K. 997. Curr. Opin. Cell Biol. 9, 93.<br />

Stone, R.L., and Dixon, J.E. 994. J. Biol. Chem. 269, 3 323.<br />

58 Orders Phone 800 854 34 7<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Fax 800 776 0999<br />

Web www.emdbiosciences.com/calbiochem<br />

Protein<br />

P i<br />

Ser<br />

Thr<br />

Tyr<br />

Protein<br />

Phosphatase<br />

Protein<br />

More online... www.calbiochem.com/inhibitors/PP<br />

Ser<br />

Thr<br />

Tyr<br />

P


Protein Phosphatase <strong>Inhibitor</strong>s<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Phosphorylation/Dephosphorylation<br />

Product Cat. No. Comments Size Price<br />

bpV(bipy) 203694 [Potassium Bisperoxo(bipyridine)oxovanadate (V)]<br />

A potent protein tyrosine phosphatase (PTP) inhibitor (K i = 00 nM for insulin<br />

receptor dephosphorylation).<br />

bpV(HOpic) 203701 [Dipotassium Bisperoxo(5-hydroxypyridine-2-carboxyl)oxovanadate (V)]<br />

A potent protein tyrosine phosphatase (PTP) inhibitor.<br />

bpV(phen) 203695 [Potassium Bisperoxo(1,10-phenanthroline)oxovanadate (V)]<br />

A potent protein tyrosine phosphatase (PTP) inhibitor. Exhibits 000-fold potency<br />

over sodium orthovanadate.<br />

bpV(pic) 203705 [Dipotassium Bisperoxo(picolinato)oxovanadate (V)]<br />

A potent protein tyrosine phosphatase (PTP) inhibitor.<br />

Calcineurin<br />

Autoinhibitory Peptide<br />

Calcineurin<br />

Autoinhibitory Peptide,<br />

Cell-permeable<br />

Calyculin A,<br />

Discodermia calyx<br />

207000 (ITSFEEAKGLDRINERMPPRRDAMP)<br />

A specific calcineurin inhibitor (PP2B) that blocks Mn 2+ -stimulated PP2B activity<br />

(IC 50 = 0 mM).<br />

207001 (11R-CaN-AID; Ac-RRRRRRRRRRRGGGRMAPPRRDAMPSDA-NH 2 )<br />

A cell-permeable peptide composed of the calcineurin (CaN) autoinhibitory domain<br />

(AID) fused to a poly-arginine-based protein transduction domain ( R) that inhibits<br />

CaN phosphatase activity.<br />

208851 A cell-permeable phosphorylated polyketide that inhibits PP2A ~PP >> PP2B<br />

(IC 50 for PP2A = 0.5 - .0 nM and for PP = 2.0 nM).<br />

Cantharidic Acid 210150 (5´-3´2,3-Dicarboxy-2,3-dimethyl-1,4-epoxycyclohexane; exo-1,6-Dicarboxy-endo-1,<br />

6-dimethyl-7-oxabicylco[2,2,1]heptane)<br />

A terpenoid compound with high selectivity for PP2A (IC = 50 nM).<br />

50<br />

Cantharidin 210155 (Hexahydro-3a,7a-dimethyl-4,7-epoxyisobenzofuran-1,3-dione)<br />

A cell-permeable terpenoid that inhibits PP2A > PP >> PP2B (IC 50 for PP2A = 40 nM<br />

and for PP = 473 nM).<br />

CDC25 Phosphatase<br />

<strong>Inhibitor</strong>, BN82002<br />

CDC25 Phosphatase<br />

<strong>Inhibitor</strong>, NSC 663284<br />

Cyclosporin A,<br />

Tolypocladium inflatum<br />

217691 [N-(2-Hydroxy-3-methoxy-5-dimethylamino)benzyl, N´-(2-(4-nitrophenethyl)),<br />

N´´-methylamine]<br />

A cell-permeable, ortho-hydroxybenzylamino compound that acts as a potent, selective<br />

and irreversible inhibitor of CDC25 phosphatase family (IC in mM = 2.4, 3.9, 6.3, 5.4,<br />

50<br />

and 4.6 for 25A, 25B2, 25B3, 25C, and 25C-cat, respectively). Displays ~20-fold greater<br />

selectivity for CDC25 phosphatases over CD45 tyrosine phosphatase.<br />

217692 [6-Chloro-7-(2-morpholin-4-yl-ethylamino)quinoline-5,8-dione; DA3003-1]<br />

A cell-permeable, 7-substituted quinolinedione compound that acts as a potent,<br />

irreversible and mixed competitive inhibitor of the CDC25 phosphatase family (K i =<br />

29 nM, 95 nM and 89 nM for CDC25A, CDC25B2 and CDC25C, respectively; IC 50 =<br />

2 0 nM for CDC25B2) and displays nearly 20- and 450-fold greater selectivity for the<br />

CDC252 phosphatases over VHR and PTP B (IC 50 = 4.0 mM and > 00 mM, respectively).<br />

5 mg $ 0<br />

5 mg $ 5<br />

0 mg $ 27<br />

5 mg $ 2<br />

250 mg $97<br />

mg $ 63<br />

0 mg $ 2<br />

0 mg $63<br />

20 mg $58<br />

5 mg $90<br />

5 mg $ 42<br />

239835 Binds to cyclophilin in cells; the complex inhibits PP2B with nanomolar affinity. 00 mg $68<br />

Cypermethrin 239900 [(R,S)-a-Cyano-3-phenoxybenzyl-3-(2,2-dichlorovinyl)-2,2-dimethylcyclopropanecarboxylate]<br />

A potent inhibitor of PP2B (IC 50 = 40 pM).<br />

DARPP-32, Rat,<br />

Recombinant, E. coli<br />

DARPP-32, Phospho-,<br />

Rat, Recombinant,<br />

E. coli<br />

251755 (Dopamine- and cAMP-regulated Phosphoprotein)<br />

An inhibitor of PP (IC 50 = –2 mM).<br />

251756 (Phospho-dopamine- and cAMP-regulated Phosphoprotein)<br />

A potent inhibitor of PP (IC 50 = nM).<br />

Deltamethrin 253300 [(S)-a-Cyano-3-phenoxybenzyl(1R)-cis-3-(2,2-dibromovinyl)-2,2dimethylcyclopropanecarboxylate]<br />

A potent inhibitor of PP2B (IC = 00 pM).<br />

50<br />

0 mg $69<br />

00 mg $2<br />

30 mg $240<br />

0 mg $90<br />

Dephostatin 263200 A protein tyrosine phosphatase (PTP) inhibitor (IC 50 = 7.7 mM). mg $93<br />

3,4-Dephostatin 263202 (3,4-Dihydroxy-N-methyl-N-nitrosoaniline)<br />

A protein tyrosine phosphatase inhibitor (IC 50 = 8 mM).<br />

3,4-Dephostatin, Ethyl- 263203 A more stable ethyl analog of the protein tyrosine phosphatase (PTP) inhibitor 3,<br />

4-Dephostatin (Cat. No. 263202). Potently inhibits PTP B (IC 50 = 3. 8 mM).<br />

mg $ 73<br />

mg $ 30<br />

Technical Support<br />

Phone 800 628 8470<br />

E-mail calbiochem@emdbiosciences.com<br />

59


Phosphorylation/Dephosphorylation<br />

Protein Phosphatase <strong>Inhibitor</strong>s, continued<br />

Product Cat. No. Comments Size Price<br />

,4-Dimethylendothall 311250 (1,4-Dimethyl-7-oxabicyclo[2.2.1]heptane-2,3-dicarboxylic Acid)<br />

A useful negative control for Canthardic Acid (Cat. No. 2 0 50), Canthardin<br />

(Cat. No. 2 0 55), and Endothall (Cat. No. 324760).<br />

N eIF-2a <strong>Inhibitor</strong>,<br />

Salubrinal<br />

324895 (Sal)<br />

A cell-permeable thiourea compound that acts as a selective inhibitor of eukaryotic<br />

translation initiation factor 2 subunit a (eIF-2a) dephosphorylation by phosphatase<br />

complexes.<br />

Endothall 324760 (7-Oxabicyclo[2.2.1]heptane-2,3-dicarboxylic Acid)<br />

A specific inhibitor of PP2A (IC 50 = 90 nM).<br />

Fenvalerate 341380 [a-Cyano-3-phenoxybenzyl-a-(4-chlorophenyl)isovalerate]<br />

A potent inhibitor of PP2B (IC 50 = 2–4 nM).<br />

Fostriecin, Sodium<br />

Salt, Streptomyces<br />

pulveraceous<br />

b-Glycerophosphate,<br />

Disodium Salt,<br />

Pentahydrate<br />

Microcystin-LF,<br />

Microcystis aeruginosa<br />

Microcystin-LR,<br />

Microcystis aeruginosa<br />

InSolution<br />

Microcystin-LR,<br />

Microcystis aeruginosa<br />

Microcystin-LW,<br />

Microcystis aeruginosa<br />

Microcystin-RR,<br />

Microcystis aeruginosa<br />

344280 (FST; Phosphotrienin)<br />

A potent PP2A inhibitor (IC 50 = 3.2 nM). Inhibits PP only at higher concentrations<br />

(IC 50 = 3 mM).<br />

35675 A phosphate group donor in matrix mineralization studies that acts as a protein<br />

phosphatase inhibitor.<br />

475814 A more cell-permeable analog of Microcystin-LR (Cat. No. 4758 5). Useful for studies<br />

in intact cells. Not available for sale outside the United States.<br />

475815 A cyclic peptide that inhibits PP2A~PP >> PP2B (IC 50 for PP2A = 40 pM and for<br />

PP = .7 nM). Does not enter some mammalian cells. Not available for sale outside<br />

the United States.<br />

475821 A 2.5 mM (250 mg/ 00 ml) of Microcystin-LR, Microcystis aeurginosa<br />

(Cat. No. 4758 5) in DMSO. Not available for sale outside the United States.<br />

475818 A more cell-permeable analog of Microcystin-LR (Cat. No. 4758 5). Useful for studies<br />

in intact cells. Not available for sale outside the United States.<br />

475816 A cyclic peptide that inhibits PP2A~PP >> PP2B (IC 50 = .4 mM). Does not enter some<br />

mammalian cells. Not available for sale outside the United States.<br />

mpV(pic) 475950 [Monoperoxo(picolinato)oxovanadate(V)]<br />

A potent PTP inhibitor. More potent for insulin receptor (IR) dephosphorylation than<br />

EGFR dephosphorylation.<br />

a-Naphthyl<br />

Acid Phosphate,<br />

Monosodium Salt<br />

NFAT Activation<br />

<strong>Inhibitor</strong> III<br />

NIPP- , His•Tag®,<br />

Bovine Thymus,<br />

Recombinant, E. coli<br />

Okadaic Acid,<br />

Prorocentrum<br />

concavum<br />

N InSolution Okadaic<br />

Acid, Prorocentrum<br />

concavum<br />

Okadaic Acid,<br />

Ammonium Salt<br />

0 mg $76<br />

5 mg $ 29<br />

20 mg $55<br />

25 mg $55<br />

0 mg $ 7<br />

60 Orders Phone 800 854 34 7<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Fax 800 776 0999<br />

Web www.emdbiosciences.com/calbiochem<br />

50 g<br />

00 g<br />

250 g<br />

$32<br />

$48<br />

$98<br />

25 mg $ 4<br />

500 mg $ 78<br />

250 mg $ 0<br />

25 mg $ 5<br />

250 mg $202<br />

0 mg $ 7<br />

479775 A broad-spectrum protein phosphatase inhibitor. 5 g $44<br />

480403 INCA-6; <strong>Inhibitor</strong> of NFAT-Calcineurin Association-6<br />

A cell-permeable quinone compound that acts as a potent and selective inhibitor of<br />

Calcineurin-NFAT (Nuclear Factor of Activated T cells) signaling. Binds to calcineurin with<br />

high affinity (K d = 800 nM), disrupts its interaction with NFAT and completely blocks its<br />

dephosphorylation, nuclear import of NFAT (~40 mM in C .7W2 T cells), and induction of<br />

cytokine mRNAs. Unlike CsA (Cat. No. 239835) and FK506, INCA-6 does not affect calcineurin<br />

activity or its downstream signaling.<br />

482251 (Nuclear <strong>Inhibitor</strong> of Protein Phosphatase-1)<br />

A potent and specific inhibitor or protein phosphatase (PP ; K i = – 0 pM) that can be used<br />

to distinguish PP from other major serine/threonine protein phosphatases, including PP2A,<br />

PP2B, and PP2C.<br />

495604 (OA)<br />

A cell-permeable inhibitor of PP2A > PP >> PP2B. (IC 50 for PP2A = 00 pM;<br />

for PP = 0– 5 nM; and for PP2B = 5 mM).<br />

495609 A 250 mM (25 mg/ 24 ml) solution of Okadaic Acid, Prorocentrum concavum<br />

(Cat. No. 495604) in DMSO.<br />

459616 A water-soluble form of Okadaic Acid (Cat. No. 495604). Inhibits protein phosphatases<br />

and 2A.<br />

5 mg $90<br />

0 mg<br />

25 mg<br />

00 mg<br />

mg $95<br />

$40<br />

$65<br />

$2 2<br />

25 mg $65<br />

25 mg $60


Protein Phosphatase <strong>Inhibitor</strong>s, continued<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Phosphorylation/Dephosphorylation<br />

Product Cat. No. Comments Size Price<br />

Okadaic Acid,<br />

Potassium Salt<br />

Okadaic Acid, Sodium<br />

Salt<br />

459618 A water-soluble form of Okadaic Acid (Cat. No. 495604). Inhibits protein phosphatases<br />

and 2A.<br />

459620 A water-soluble form of Okadaic Acid (Cat. No. 495604). Inhibits protein phosphatases<br />

and 2A.<br />

Phenylarsine Oxide 521000 (Oxophenylarsine; PAO)<br />

A membrane-permeable protein tyrosine phosphatase inhibitor (IC 50 = 8 mM).<br />

Stimulates 2-deoxyglucose transport in insulin-resistant human skeletal muscle and<br />

activates p56 lck protein tyrosine kinase. Blocks TNF-a-dependent activation of NF-kB in<br />

human myeloid ML- a cells. PAO inhibits the protease activities of recombinant human<br />

caspases as well as endogenous caspases that are active in extracts of pre-apoptotic<br />

chicken DU249 cells (S/M extracts).<br />

5-Phosphatase <strong>Inhibitor</strong> 524620 [(1R,2R,4R)-Cyclohexane-1,2,4-tris(methylenesulfonate)]<br />

Inhibits 5-phosphatase-catalyzed dephosphorylation of Ins( ,4,5)P 3 (K i = 4 mM).<br />

Protein Phosphatase<br />

<strong>Inhibitor</strong> 2, Human,<br />

Recombinant, E. coli<br />

Protein Phosphatase<br />

<strong>Inhibitor</strong> 2, Rabbit<br />

Muscle, Recombinant,<br />

E. coli<br />

Protein Phosphatase 2A<br />

<strong>Inhibitor</strong> I PP2A , Human<br />

Kidney, Recombinant,<br />

E. coli<br />

Protein Phosphatase 2A<br />

PP2A <strong>Inhibitor</strong> I , Human,<br />

2<br />

Recombinant, E. coli<br />

Protein Tyrosine<br />

Phosphatase <strong>Inhibitor</strong> I<br />

Protein Tyrosine<br />

Phosphatase <strong>Inhibitor</strong> II<br />

Protein Tyrosine<br />

Phosphatase <strong>Inhibitor</strong><br />

III<br />

Protein Tyrosine<br />

Phosphatase <strong>Inhibitor</strong><br />

IV<br />

Protein Tyrosine<br />

Phosphatase CD45<br />

<strong>Inhibitor</strong><br />

539638 (I-2; <strong>Inhibitor</strong>-2)<br />

Potently inhibits the activity of the free catalytic subunit of PP (IC 50 = nM).<br />

539516 (PPI-2)<br />

Inhibits the catalytic subunit of PP (IC 50 = 2 nM).<br />

50 mg $93<br />

25 mg $60<br />

250 mg $34<br />

mg $60<br />

00 mg $20<br />

20 mg $202<br />

539552 Potently inhibits all forms of PP2A (K i = ~ 00 pM). 250 ng $209<br />

PP2A 539620 (I ) 2<br />

Potently inhibits PP2A (K = ~ 00 pM).<br />

i<br />

540200 (a-Bromo-4-hydroxyacetophenone; 4-Hydroxyphenacyl Br)<br />

A potent, cell-permeable, covalent PTP inhibitor.<br />

540205 (a-Bromo-4-methoxyacetophenone; 4-Methoxyphenacyl Br)<br />

A potent, cell-permeable, covalent PTP inhibitor.<br />

540210 [a-Bromo-4-(carboxymethoxy)acetophenone; 4-(Carboxymethoxy)phenacyl Br]<br />

A potent, cell-permeable, covalent PTP inhibitor.<br />

540211 [bis(4-Trifluoromethylsulfonamidophenyl)-1,4-diisopropylbenzene]<br />

A potent, reversible, substrate competitive, active-site-directed inhibitor of protein tyrosine<br />

phosphatases (PTP). Reported to inhibit SHP-2 (IC 50 = .8 mM), PTP B (IC 50 = 2.5 mM), PTP-e<br />

(IC 50 = 8.4 mM), PTP-Meg-2 (IC 50 = 3 mM), PTP-s (IC 50 = 20 mM), PTP-b (IC 50 = 6.4 mM), and<br />

PTP-m (IC 50 = 6.7 mM).<br />

540215 [N-(9,10-Dioxo-9,10-dihydro-phenanthren-2-yl)-2,2-dimethyl-propionamide;<br />

PTPase CD45 <strong>Inhibitor</strong>]<br />

A cell-permeable, potent, selective, competitive, and reversible inhibitor of CD45<br />

(IC = 200 nM using pNPP as the substrate, 3.8 mM for CD45 lck, > 30 mM for PTP B lck).<br />

50<br />

PTP B <strong>Inhibitor</strong> 539741 [3-(3,5-Dibromo-4-hydroxy-benzoyl)-2-ethyl-benzofuran-6-sulfonicacid-<br />

(4-(thiazol-2-ylsulfamyl)-phenyl)-amide]<br />

A cell-permeable, selective, reversible and non-competitive allosteric inhibitor of PTP B<br />

(IC = 4 mM and 8 mM for PTP B and PTP B , respectively). Binds to a novel site<br />

50 403 298<br />

away from the catalytic pocket and inhibits PTP B activity by preventing closure of the<br />

WPD loop.<br />

RK-682, Streptomyces<br />

sp.<br />

557322 (3-Hexadecanoyl-5-hydroxymethyl-tetronic Acid)<br />

A specific non-cell-permeable inhibitor of PTP. Inhibits dephosphorylation activity of<br />

CD45 (IC 50 = 54 mM) and VHR (IC 50 = 2.0 mM) in vitro.<br />

Sodium Orthovanadate 567540 <strong>Inhibitor</strong> of protein tyrosine phosphatases of general/broad specificity; potent inhibitor<br />

of alkaline phosphatase.<br />

250 ng $209<br />

0 mg $ 8<br />

25 mg $43<br />

0 mg $ 8<br />

0 mg $84<br />

mg $ 36<br />

5 mg $ 63<br />

200 mg $ 03<br />

5 g $36<br />

Technical Support<br />

Phone 800 628 8470<br />

E-mail calbiochem@emdbiosciences.com<br />

6


Phosphorylation/Dephosphorylation<br />

Protein Phosphatase <strong>Inhibitor</strong>s, continued<br />

Product Cat. No. Comments Size Price<br />

Sodium Stibogluconate 567565 (Antimony Sodium Gluconate; NaSb v ; SSG)<br />

An irreversible inhibitor of (PTPase), including Src homology PTPase- (SHP- ). Exhibits<br />

anti-leishmanial properties. At higher concentrations, inhibits SHP-2 and PTP B activities.<br />

Suramin, Sodium Salt 574625 Useful as a reversible and competitive inhibitor of protein tyrosine phosphatases. 50 mg<br />

200 mg<br />

N InSolution<br />

Tautomycetin, S.<br />

griseochromogenes<br />

N<br />

Tautomycin,<br />

Streptomyces<br />

spiroverticillatus<br />

Phosphatase <strong>Inhibitor</strong> Cocktail Set I<br />

A cocktail of three phosphatase inhibitors that will inhibit alkaline<br />

phosphatases as well as serine/threonine protein phosphatases such<br />

as PP and PP2A. This product is provided as a set of five ml vials.<br />

Each vial contains ml of phosphatase inhibitor cocktail solubilized<br />

in DMSO with the following components: Bromotetramisole oxalate<br />

(0.5 mM), Cantharidin (Cat. No. 2 0 55; 500 mM), and Microcystin-<br />

LR (Cat. No. 4758 5; 500 nM). Not available for sale outside the<br />

United States.<br />

Cat. No. 524624 1 set $170<br />

Phosphatase <strong>Inhibitor</strong> Cocktail Set II<br />

A cocktail of five phosphatase inhibitors for the inhibition of acid<br />

and alkaline phosphatases as well as protein tyrosine phosphatases<br />

(PTPs). Suitable for use with tissue and cell extracts, including<br />

extracts containing detergents. Provided as a set of five vials, with<br />

each vial containing ml aqueous solution of 200 mM Imidazole,<br />

00 mM Sodium Fluoride, 5 mM Sodium Molybdate, 00 mM<br />

Sodium Orthovanadate, and 400 mM Sodium Tartrate Dihydrate.<br />

Cat. No. 524625 1 set $213<br />

Phosphatase <strong>Inhibitor</strong> Cocktail Set III<br />

580550 A mM (50 mg/82 ml) solution of Tautomycetin in DMSO. Specifically inhibits PP<br />

activity with ~38-fold greater selectivity over PP2A (IC 50 = .6 nM for PP and 62 nM<br />

for PP2A). Further, inhibits PP5 at higher concentrations (IC 50 ~ mM) and only weakly<br />

affects calcineurin and LDP- at mM.<br />

580551 A potent inhibitor of PP (IC 50 = nM), PP2A (IC 50 = 0 nM), and smooth muscle<br />

endogenous phosphatase (IC 50 = 6 nM).<br />

A cocktail of four phosphatase inhibitors for the inhibition of both<br />

serine/threonine and protein tyrosine phosphatases. Available as a<br />

ml vial or as a set of five ml vials. Each vial contains ml<br />

of aqueous solution with the following components: 50 mM<br />

Sodium Fluoride, 0 mM b-Glycerophosphate, 0 mM Sodium<br />

Pyrophosphate Decahydrate, and mM Sodium Orthovanadate.<br />

Cat. No. 524627 1 ml<br />

1 set<br />

$115<br />

$395<br />

Phosphatase <strong>Inhibitor</strong> Cocktail Set IV<br />

Phosphotyrosine Phosphatase <strong>Inhibitor</strong> Set<br />

(Vanadium)<br />

Contains 5 g of Sodium Orthovanadate (Cat. No. 567540),<br />

0 mg each of bpV(phen) (Cat. No. 203695) and mpV(pic)<br />

(Cat. No. 475950).<br />

Cat. No. 525325 1 set $203<br />

Protein Phosphatase <strong>Inhibitor</strong> Set II<br />

g $75<br />

Contains 0 mg Cypermethrin (Cat. No, 239900), mg Dephostatin<br />

(Cat. No. 263200), 0 mg Okadaic Acid (Cat. No. 495604), and mg<br />

NIPP- , Bovine Thymus.<br />

Cat. No. 539630 1 set $304<br />

62 Orders Phone 800 854 34 7<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Fax 800 776 0999<br />

Web www.emdbiosciences.com/calbiochem<br />

N<br />

$34<br />

$<br />

50 mg $ 80<br />

50 mg $2 7<br />

A cocktail of three phosphatase inhibitors for the inhibition of both<br />

serine/threonine and alkaline phosphatases. Available as a ml vial<br />

or as a set of five ml vials. Each vial contains ml of solution with<br />

the following components: 500 mM Cantharidin (Cat. No. 2 0 55),<br />

2.5 mM (-)-p-Bromotetramisole oxalate, and mM Calyculin A,<br />

Discodermia calyx (Cat. No. 20885 ).<br />

Cat. No. 524628 1 ml<br />

1 set<br />

$75<br />

$285


Apoptosis<br />

Caspase <strong>Inhibitor</strong>s<br />

Activation of caspases is one of the most widely<br />

recognized features of apoptosis. Caspases are cysteinedependent,<br />

aspartate-specific proteases. They exist as<br />

latent precursors, which, when activated by limited<br />

proteolysis, initiate the death program by destroying<br />

key components of the cellular infrastructure and<br />

activating factors that mediate damage to the cells.<br />

The mechanism of caspase activation appears to be<br />

conserved in evolution. Thus far, 14 members of the<br />

caspase family have been identified, 11 of which are<br />

present in humans. Caspases have been categorized into<br />

upstream initiators and downstream executioners. A<br />

distinctive feature of caspases is the absolute requirement<br />

of an aspartic acid residue in the substrate P 1 position.<br />

The P 4 residue is important in substrate recognition<br />

and specificity. Generally, catalysis involves a cysteine<br />

protease mechanism. The tetrapeptide corresponding to<br />

the substrate P 4 - P 1 residues is sufficient to recognize<br />

both caspase-1 and caspase-3. This also forms the basis of<br />

designing novel inhibitors of caspases.<br />

Caspase activation is generally considered as the<br />

"point of no return” in apoptotic pathways. Caspases<br />

are activated by two major pathways: the receptormediated<br />

(Fas ligand or TNF-a-mediated) pathway and<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Apoptosis<br />

the mitochondrial pathway. The receptor-mediated<br />

pathway leads to the activation of pro-caspase-8. In the<br />

mitochondrial pathway, pro-apoptotic members of the<br />

Bcl-2 family associate with mitochondria and direct the<br />

release of cytochrome c (Cyt c) and other proteins, which<br />

activate pro-caspase-9.<br />

Caspase inhibitors act by binding to the active site of<br />

caspases either in a reversible or irreversible manner.<br />

<strong>Inhibitor</strong> design includes a peptide recognition<br />

sequence attached to a functional group such as<br />

an aldehyde (CHO), chloromethylketone (CMK), or<br />

fluoromethylketone (FMK). The peptide recognition<br />

sequence corresponding to that found in endogenous<br />

substrates determines the specificity of a particular<br />

caspase. For example, compounds with the Ac-YVAD-<br />

CHO sequence are potent inhibitors of caspases-1<br />

(K i ≈ 10 nM), and exhibit very weak inhibitory effect on<br />

caspases-3 and -7 (K i ≥ 50 mM). Exclusion of the tyrosine<br />

residue from the inhibitor peptide results in a potent but<br />

less specific inhibitor. For example, Z-VAD-FMK inhibits<br />

not only caspases-1 and -4, but also caspases-3 and -7.<br />

More online... www.calbiochem.com/inhibitors/caspase<br />

Technical Support<br />

Phone 800 628 8470<br />

E-mail calbiochem@emdbiosciences.com<br />

63


Apoptosis<br />

Caspase <strong>Inhibitor</strong>s<br />

Product Cat. No. Sequence<br />

Cell -<br />

Permeable<br />

Reversible?<br />

Known Target<br />

Caspases<br />

(or Granzyme B)<br />

Size Price<br />

Caspase <strong>Inhibitor</strong> I 627610 Z-VAD(OMe)-FMK a Yes No General mg $ 84<br />

InSolution Caspase <strong>Inhibitor</strong> I 627609 Z-VAD(OMe)-FMK a Yes No General mg $ 84<br />

Caspase <strong>Inhibitor</strong> I, Biotin Conjugate 218742 Biotin-X-VAD(OMe)-FMK a — No General mg $355<br />

Caspase <strong>Inhibitor</strong> II 218735 Ac-VAD-CHO ‡ No Yes General mg $65<br />

Caspase <strong>Inhibitor</strong> II,<br />

Cell-Permeable<br />

218830 Ac-AAVALLPAVLLALLAPVAD-<br />

CHO<br />

Yes Yes General mg $ 64<br />

Caspase <strong>Inhibitor</strong> III 218745 Boc-D(OMe)-FMK a Yes No General 250 mg<br />

mg<br />

Caspase <strong>Inhibitor</strong> IV 218784 Boc-D(OBzl)-CMK b Yes No General 5 mg $60<br />

Caspase <strong>Inhibitor</strong> VI 219007 Z-VAD-FMK a — No General 250 mg<br />

mg<br />

N InSolution Caspase <strong>Inhibitor</strong> VI 219011 Z-VAD-FMK a — No General mg $ 82<br />

Caspase <strong>Inhibitor</strong> VIII 218729 Ac-VDVAD-CHO No Yes 2, 3, 7 mg $99<br />

N Caspase <strong>Inhibitor</strong> X 218723 — No Yes 3, 7, 8 5 mg $ 8<br />

Caspase <strong>Inhibitor</strong>, Negative Control 342000 Z-FA-FMK Yes No mg<br />

5 mg<br />

Caspase- <strong>Inhibitor</strong> I 400010 Ac-YVAD-CHO ‡ No Yes , 4 mg<br />

5 mg<br />

Caspase- <strong>Inhibitor</strong> I,<br />

Cell-Permeable<br />

400011 Ac-AAVALLPAVLLALLAP-<br />

YVAD-CHO<br />

64 Orders Phone 800 854 34 7<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Fax 800 776 0999<br />

Web www.emdbiosciences.com/calbiochem<br />

$57<br />

$ 44<br />

$62<br />

$ 82<br />

$77<br />

$3 3<br />

$60<br />

$243<br />

Yes Yes , 4 mg $ 70<br />

Caspase- <strong>Inhibitor</strong> II 400012 Ac-YVAD-CMK b Yes No , 4 5 mg $208<br />

Caspase- <strong>Inhibitor</strong> II, Biotin<br />

Conjugate<br />

400022 Biotin-YVAD-CMK b — No , 4 5 mg $297<br />

Caspase- <strong>Inhibitor</strong> IV 400015 Ac-YVAD-AOM d Yes No , 4 mg $95<br />

Caspase- <strong>Inhibitor</strong> V 400019 Z-Asp-CH 2 -DCB e Yes No , 4 5 mg $362<br />

Caspase- <strong>Inhibitor</strong> VI 218746 Z-YVAD(OMe)-FMK a Yes No , 4 250 mg<br />

mg<br />

Caspase-2 <strong>Inhibitor</strong> I 218744 Z-VD(OMe)VAD(OMe)-FMK a Yes No 2 250 mg<br />

mg<br />

Caspase-2 <strong>Inhibitor</strong> II 218814 Ac-LDESD-CHO No Yes 2, 3 mg<br />

5 mg<br />

Caspase-3 <strong>Inhibitor</strong> I 235420 Ac-DEVD-CHO ‡ No Yes 3, 6, 7, 8, 0 mg<br />

5 mg<br />

Caspase-3 <strong>Inhibitor</strong> I, Biotin<br />

Conjugate<br />

Caspase-3 <strong>Inhibitor</strong> I,<br />

Cell-Permeable<br />

InSolution Caspase-3 <strong>Inhibitor</strong> I,<br />

Cell-Permeable<br />

$88<br />

$263<br />

$<br />

$3 0<br />

$73<br />

$286<br />

$68<br />

$267<br />

235422 Biotin-DEVD-CHO ‡ — Yes 3, 6, 7, 8, 0 mg $ 7<br />

235423 Ac-AAVALLPAVLLALLAP-<br />

DEVD-CHO<br />

235427 Ac-AAVALLPAVLLALLAP-<br />

DEVD-CHO<br />

Caspase-3 <strong>Inhibitor</strong> II 264155 Z-D(OMe)E(OMe)VD(OMe)-<br />

FMK a<br />

InSolution Caspase-3 <strong>Inhibitor</strong> II 264156 Ac-AAVALLPAVLLALLAP-<br />

DEVD-CHO<br />

Caspase-3 <strong>Inhibitor</strong> II, Biotin<br />

Conjugate<br />

218747 Biotin-X-<br />

D(OMe)E(OMe)VD(OMe)-<br />

FMK a<br />

Yes Yes 3, 6, 7, 8, 0 mg $ 56<br />

Yes Yes 3, 6, 7, 8, 0 mg $ 56<br />

Yes No 3, 6, 7, 8, 0 250 mg<br />

mg<br />

$8<br />

$227<br />

Yes Yes 3, 6, 7, 8, 0 250 mg $83<br />

— No 3, 6, 7, 0 mg $366<br />

Caspase-3 <strong>Inhibitor</strong> III 218750 Ac-DEVD-CMK b Yes No 3, 6, 7, 8, 0 mg<br />

5 mg<br />

Caspase-3 <strong>Inhibitor</strong> IV 235421 Ac-DMQD-CHO ‡ No Yes 3 mg<br />

5 mg<br />

Caspase-3 <strong>Inhibitor</strong> V 219002 Z-D(OMe)QMD(OMe)-FMK Yes No 3 mg $238<br />

Key: a: FMK = Fluoromethyl ketone; b: CMK = Chloromethyl ketone; c: FAOM = 2,6-bis(trifluoromethyl) benzoyloxymethyl ketone; d: AOM = 2,6dimethylbenzoyloxy<br />

ketone; e: DCB = 2,6 dichlorobenzoyloxy; ‡: These aldehyde-based inhibitors may be cell-permeable, albeit to a lesser extent.<br />

$66<br />

$26<br />

$83<br />

$275


Caspase <strong>Inhibitor</strong>s, continued<br />

Product Cat. No. Sequence<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Cell -<br />

Permeable<br />

Reversible?<br />

Known Target<br />

Caspases<br />

(or Granzyme B)<br />

Apoptosis<br />

Size Price<br />

N Caspase-3 <strong>Inhibitor</strong> VII 219012 — Yes Yes 3 mg $ 35<br />

Caspase-3/7 <strong>Inhibitor</strong> I 218826 — Yes Yes 3, 7 mg $96<br />

N Caspase-3/7 <strong>Inhibitor</strong> II 218832 Ac-DNLD-CHO ‡ No Yes 3, 7, 8, 9 mg $90<br />

Caspase-4 <strong>Inhibitor</strong> I 218755 Ac-LEVD-CHO ‡ No Yes 4 mg $62<br />

Caspase-4 <strong>Inhibitor</strong> I,<br />

Cell-Permeable<br />

218766 Ac-AAVALLPAVLLALLAP-<br />

LEVD-CHO<br />

Yes Yes 4 mg $ 65<br />

Caspase-5 <strong>Inhibitor</strong> I 218753 Z-WE(OMe)HD(OMe)-FMK a Yes No , 4, 5 250 mg<br />

mg<br />

Caspase-6 <strong>Inhibitor</strong> I 218757 Z-VE(OMe)ID(OMe)-FMK a Yes No 6 250 mg<br />

mg<br />

Caspase-6 <strong>Inhibitor</strong> II,<br />

Cell-Permeable<br />

Caspase-8 <strong>Inhibitor</strong> I,<br />

Cell-Permeable<br />

218767 Ac-AAVALLPAVLLALLAP-<br />

VEID-CHO<br />

218773 Ac-AAVALLPAVLLALLAP-<br />

IETD-CHO<br />

$ 3<br />

$3 9<br />

$92<br />

$26<br />

Yes Yes 6 mg $ 70<br />

Yes Yes 8, Granzyme B mg $ 70<br />

Caspase-8 <strong>Inhibitor</strong> II 218759 Z-IE(OMe)TD(OMe)-FMK a Yes No 8, Granzyme B 250 mg<br />

mg<br />

InSolution Caspase-8 <strong>Inhibitor</strong> II 218840 Z-IE(OMe)TD(OMe)-FMK a Yes No 8, Granzyme B 250 mg $88<br />

Caspase-9 <strong>Inhibitor</strong> I 218761 Z-LE(OMe)HD(OMe)-FMK a Yes No 9 250 mg<br />

mg<br />

InSolution Caspase-9 <strong>Inhibitor</strong> I 218841 Z-LE(OMe)HD(OMe)-FMK a Yes No 9 250 mg $ 3<br />

Caspase-9 <strong>Inhibitor</strong> II,<br />

Cell-Permeable<br />

218776 Ac-AAVALLPAVLLALLAP-<br />

LEHD-CHO<br />

$88<br />

$263<br />

$ 3<br />

$3 0<br />

Yes Yes 9 mg $ 70<br />

Caspase-9 <strong>Inhibitor</strong> III 218728 Ac-LEHD-CMK Yes No 9 mg $87<br />

Caspase- 3 <strong>Inhibitor</strong> I 219005 Ac-LEED-CHO ‡ No Yes 3 mg $43<br />

Caspase- 3 <strong>Inhibitor</strong> II 219009 Z-LE(OMe)E(OMe)D(OMe)-<br />

FMK a<br />

Yes No 3 250 mg<br />

mg<br />

CrmA, Recombinant PF122 — No — , Granzyme B 00 mg $5 0<br />

Granzyme B <strong>Inhibitor</strong> I 368050 Z-AAD-CMK b Yes No Granzyme B mg $69<br />

Granzyme B <strong>Inhibitor</strong> II 368055 Ac-IETD-CHO ‡ No Yes 8, Granzyme B mg $60<br />

Granzyme B <strong>Inhibitor</strong> IV 368056 Ac-IEPD-CHO No Yes 8, Granzyme B mg $84<br />

Group III Caspase <strong>Inhibitor</strong> I 368620 Z-A-E(OMe)-V-D(OMe)-FMK a Yes No 6, 8, 9, 0 mg $27<br />

InSolution Q-VD-OPh, Non-Omethylated<br />

$83<br />

$249<br />

551476 Q-Val-Asp-CH2-Oph Yes No 3, 8, 9, 0, 2 mg $ 42<br />

XIAP, Human, Recombinant, E. coli PF137 — No — 3, 7 50 mg $386<br />

Key: a: FMK = Fluoromethyl ketone; b: CMK = Chloromethyl ketone; c: FAOM = 2,6-bis(trifluoromethyl) benzoyloxymethyl ketone; d: AOM = 2,6dimethylbenzoyloxy<br />

ketone; e: DCB = 2,6 dichlorobenzoyloxy; ‡: These aldehyde-based inhibitors may be cell-permeable, albeit to a lesser extent.<br />

Technical Support<br />

Phone 800 628 8470<br />

E-mail calbiochem@emdbiosciences.com<br />

65


Apoptosis<br />

Caspase <strong>Inhibitor</strong>s, continued<br />

Caspase <strong>Inhibitor</strong> Set I<br />

A set of 3 separate vials. Each set contains mg each of Caspase-3<br />

<strong>Inhibitor</strong> II, Z-DEVD-FMK (Cat. No. 264 55); Caspase- <strong>Inhibitor</strong> I,<br />

Ac-YVAD-CHO (Cat. No. 4000 0); and Caspase <strong>Inhibitor</strong> I, Z-VAD-FMK<br />

(Cat. No. 6276 0).<br />

Cat. No. 235429 1 set $398<br />

Caspase <strong>Inhibitor</strong> Set II<br />

A set of 8 separate vials of cell-permeable, irreversible caspase<br />

inhibitors. Each set contains 250 µg each of Caspase- <strong>Inhibitor</strong> VI,<br />

Z-YVAD-FMK (Cat. No. 2 8746); Caspase-2 <strong>Inhibitor</strong> I, Z-VDVAD-<br />

FMK (Cat. No. 2 8744); Caspase-3 <strong>Inhibitor</strong> II, Z-DEVD-FMK (Cat.<br />

No. 264 55); Caspase-5 <strong>Inhibitor</strong> I, Z-WEHD-FMK (Cat. No. 2 8753);<br />

Caspase-6 <strong>Inhibitor</strong> I, Z-VEID-FMK (Cat. No. 2 8757); Caspase-8<br />

<strong>Inhibitor</strong> II, Z-IETD-FMK (Cat. No. 2 8759); Caspase-9 <strong>Inhibitor</strong> I,<br />

Z-LEHD-FMK (Cat. No. 2 876 ); and Caspase <strong>Inhibitor</strong> III, Boc-D-FMK<br />

(Cat. No. 2 8745).<br />

Cat. No. 218772 1 set $603<br />

Granzyme <strong>Inhibitor</strong>s<br />

Product Cat. No. Comments Size Price<br />

Caspase-8 <strong>Inhibitor</strong> I,<br />

Cell-Permeable<br />

218773 (granzyme B <strong>Inhibitor</strong> II, Cell-permeable; IETD-CHO, Cell-permeable)<br />

A potent, cell-permeable and reversible inhibitor of caspase-8<br />

(FLICE, MACH, Mch5) and granzyme B.<br />

Caspase-8 <strong>Inhibitor</strong> II 218759 [granzyme B <strong>Inhibitor</strong> III; Z-IE(OMe)TD(OMe)-FMK]<br />

A potent, cell-permeable, irreversible inhibitor of caspase-8 and granzyme B.<br />

InSolution Caspase-8<br />

<strong>Inhibitor</strong> II<br />

218840 [granzyme B <strong>Inhibitor</strong> III; Z-IE(OMe)TD(OMe)-FMK]<br />

A 5 mM (250 mg/76 ml) solution of caspase-8 <strong>Inhibitor</strong> II (Cat. No. 2 8759)<br />

in anhydrous DMSO.<br />

mg $ 70<br />

66 Orders Phone 800 854 34 7<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Fax 800 776 0999<br />

Web www.emdbiosciences.com/calbiochem<br />

250 mg<br />

mg<br />

$88<br />

$263<br />

250 mg $88<br />

CrmA, Recombinant PF122 An inhibitor of caspase- and granzyme B. 00 mg $5 0<br />

Granzyme B <strong>Inhibitor</strong> I 368050 (Z-AAD-CMK)<br />

A weak inhibitor of human and murine granzyme B. Also inhibits the apoptosis related<br />

DNA fragmentation in lymphocytes by fragmentin 2, a rat lymphocyte granule protease<br />

homologous to granzyme B (ID 50 = 300 nM).<br />

Granzyme B <strong>Inhibitor</strong> II 368055 (Ac-IETD-CHO; Caspase-8 <strong>Inhibitor</strong> I)<br />

A potent, reversible inhibitor of granzyme B and caspase-8.<br />

Granzyme B <strong>Inhibitor</strong> IV 368056 (Ac-IEPD-CHO; Caspase-8 inhibitor III)<br />

A reversible inhibitor of granzyme B that also inhibits caspase-8.<br />

More online... www.calbiochem.com/inhibitors/granzyme<br />

Caspase <strong>Inhibitor</strong> Set III<br />

A set of 8 separate vials. Each set contains a ready-to-use DMSO<br />

solution of cell-permeable, irreversible inhibitors of various members of<br />

the caspase-family proteases. Contains 25 µl (2 mM) each of Caspase-<br />

<strong>Inhibitor</strong> VI, Z-YVAD-FMK (Cat. No. 2 8746); Caspase-2 <strong>Inhibitor</strong> I,<br />

Z-VDVAD-FMK (Cat. No. 2 8744); Caspase-3 <strong>Inhibitor</strong> II, Z-DEVD-<br />

FMK (Cat. No. 264 55); Caspase-5 <strong>Inhibitor</strong> I, Z-WEHD-FMK (Cat.<br />

No. 2 8753); Caspase-6 <strong>Inhibitor</strong> I, Z-VEID-FMK (Cat. No. 2 8757);<br />

Caspase-8 <strong>Inhibitor</strong> II, Z-IETD-FMK (Cat. No. 2 8759); Caspase-9<br />

<strong>Inhibitor</strong> I, Z-LEHD-FMK (Cat. No. 2 876 ); and Caspase <strong>Inhibitor</strong> I,<br />

Z-VAD-FMK (Cat. No. 6276 0).<br />

Cat. No. 218806 1 set $582<br />

Caspase <strong>Inhibitor</strong> Set IV<br />

A set of 6 separate vials. Each set contains a ready-to-use solution of cellpermeable<br />

caspase inhibitors and an apoptosis inducer. Contains 25 µl of a<br />

0 mM solution in DMSO of Caspase-3 <strong>Inhibitor</strong> II, Z-DEVD-FMK (Cat. No.<br />

264 55); Caspase-8 <strong>Inhibitor</strong> II, Z-IETD-FMK (Cat. No. 2 8759); Caspase-9<br />

<strong>Inhibitor</strong> I, Z-LEHD-FMK (Cat. No 2 876 ); general caspase inhibitor,<br />

Z-VAD-FMK (Cat. No. 6276 0); the negative control Z-FA-FMK (Cat.<br />

No. 342000), and an aqueous solution ( 00 µl, 0.5 µM) of an apoptosis<br />

inducer, Doxorubicin, Hydrochloride (Cat. No. 324380).<br />

Cat. No. 218825 1 set $325<br />

mg $69<br />

mg $60<br />

mg $84


Other Selected <strong>Inhibitor</strong>s of Apoptosis<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Apoptosis<br />

Product Cat. No. Comments Size Price<br />

Apoptosis <strong>Inhibitor</strong> 178488 [M50054; 2,2´-Methylenebis(1,3-cyclohexanedione)]<br />

A cell-permeable inhibitor of apoptosis induction (IC 50 = 283 mM in FasL-stimulated<br />

WC8 cells, 550 mM in etoposide-stimulated U937 cells). The anti-apoptotic effects<br />

are attributed to the inhibition of caspase-3 activation (IC 50 = 334 mM in etoposidestimulated<br />

U937 cells).<br />

Apoptosis <strong>Inhibitor</strong> II,<br />

NS3694<br />

178494 (NS3694)<br />

A cell-permeable compound that specifically prevents the active ~700 kDa apoptosome<br />

complex formation triggered by cytochrome c release. Protects against apoptosomemediated<br />

caspase activation and cell death.<br />

Bax Channel Blocker 196805 [(±)-1-(3,6-Dibromocarbazol-9-yl)-3-piperazin-1-yl-propan-2-ol, bis TFA]<br />

A cell-permeable dibromocarbazolo-piperazinyl derivative that displays anti-apoptotic<br />

properties. Effectively blocks Bid-induced cyctochrome c release from HeLa cell<br />

mitochondria (~80% inhibition at 5 mM) by inhibiting Bax channel-forming activity<br />

(IC 50 = 520 nM in a liposome channel assay).<br />

Bax-Inhibiting Peptide,<br />

V5<br />

Bax-Inhibiting Peptide,<br />

Negative Control<br />

Fas/FasL Antagonist,<br />

Kp7-6<br />

Humanin, Human,<br />

Synthetic<br />

Omi/HtrA2 Protease<br />

<strong>Inhibitor</strong>, Ucf- 0<br />

196810 (BIP-V5; H-VPMLK-OH)<br />

A cell-permeable pentapeptide based on the Ku70-Bax inhibiting domain that offers<br />

cytoprotection. Functions as effectively as the Caspase <strong>Inhibitor</strong> VI (Z-VAD-FMK; Cat.<br />

No. 2 9007) for Bax-mediated apoptosis (~50–200 mM).<br />

196811 (BIP-NC; H-IPMIK-OH)<br />

A cell-permeable mutated analog of the Bax-Inhibiting Peptide, V5 (Cat. No. 968 0)<br />

that serves as a negative control. Does not suppress Bax-mediated apoptosis (~200 mM).<br />

341291 (H-YC*DEHFC*Y-OH, Cyclic [Cys-Cys disulfide]; Kp7-6)<br />

Specifically antagonizes Fas/FasL-mediated cellular apoptotic signals (58% reduction<br />

of FasL-induced apoptosis in Jurkat cells at mg/ml). Binds to FasL (Cat. Nos. PF033<br />

and PF092) and Fas (CD95/APO- ) with comparable affinity (K = .2 and 3.2 mM,<br />

d<br />

respectively).<br />

400140 (H-MAPRGFSCLLLLTSEIDLPVKRRA-OH; HN)<br />

An anti-apoptotic peptide that when expressed intracellularly, offers protection against<br />

neuronal apoptosis induced by presenilin and APP mutants associated with familial<br />

Alzheimer’s disease (AD). Reduces cytochrome c release in vitro by directly binding to Bax<br />

(K ~2 nM).<br />

d<br />

496150 {High Temperature Requirement A2 <strong>Inhibitor</strong> I; 5-[5-(2-Nitrophenyl)furfurylidine]-1,3diphenyl-2-thiobarbituric<br />

Acid}<br />

A cell-permeable furfurylidine-thiobarbituric acid compound that acts as a potent,<br />

specific, competitive, and reversible inhibitor of the pro-apoptotic, heat-inducible,<br />

mitochondrial serine protease Omi/HtrA2 (IC = 9.5 mM for His-Omi ). Shows very<br />

50 34-458<br />

little activity against various other serine proteases tested (IC ≥ 200 mM). Reported to<br />

50<br />

block Omi/HtrA2 induced cell death in caspase-9 (-/-) null fibroblasts.<br />

Pifithrin-a 506132 [2-(2-Imino-4,5,6,7-tetrahydrobenzothiazol-3-yl)-1-p-tolylethanone, HBr]<br />

A cell-permeable chemical inhibitor of p53. Reversibly inhibits p53-dependent<br />

transactivation of p53-responsive genes and reversibly blocks p53-mediated apoptosis.<br />

Pifithrin-a, Cyclic- 506134 {2-(4-Methylphenyl)imidazo[2,1-b]-5,6,7,8-tetrahydrobenzothiazole, HBr; QB102}<br />

A cell-permeable and very stable analog of Pifithrin-a (Cat. No. 506 32) with similar<br />

biological functions, but with reduced cytotoxicity. Reversibly blocks p53-mediated<br />

apoptosis.<br />

0 mg $96<br />

0 mg $ 00<br />

5 mg $84<br />

5 mg $84<br />

5 mg $84<br />

25 mg $237<br />

mg $252<br />

0 mg $98<br />

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Apoptosis<br />

Necrosis <strong>Inhibitor</strong>s<br />

Product Cat. No. Comments Size Price<br />

N Necrosis <strong>Inhibitor</strong>,<br />

IM-54<br />

480060 2-(1H-Indol-3-yl)-3-pentylamino-maleimide<br />

A cell-permeable, mono-indolylmaleimide compound that selectively blocks oxidative<br />

stress-induced necrotic cell death (~3 mM IM-54 prevented ~50% cell death in HL60<br />

cells exposed to 00 mM H 2 O 2 ). Does not offer protection against Etoposide-<br />

(Cat. No. 34 205) induced apoptosis or display antioxidant properties.<br />

N Necrostatin- 480065 5-(Indol-3-ylmethyl)-(2-thio-3-methyl)hydantoin; Nec-1; Necroptotic <strong>Inhibitor</strong>, Nec-1<br />

A cell-permeable, potent, and selective blocker of necroptosis, a non-apoptotic necrotic<br />

cell-death pathway mediated by death-domain receptors (DRs), in vitro (EC 50 = 494 nM<br />

in FADD-deficient Jurkat cells treated with TNF-a). Also shown to offer neuroprotection<br />

in a mouse model of ischemic brain injury. Does not disrupt normal cellular physiology or<br />

exhibit any effects on apoptosis, autophagy, or oxidative stress-induced necrosis.<br />

N Necrostatin- ,<br />

Inactive Control<br />

480066 5-(Indol-3-ylmethyl)-2-thiohydantoin, Nec-1i<br />

A cell-permeable, analog of Nec- (Cat. No. 480065) that is devoid of antinecroptotic<br />

properties and serves as a suitable inactive control.<br />

inNovations<br />

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the latest Novagen® products as used<br />

in research applications.<br />

• research articles from our scientists and our customers<br />

• answers from our technical service scientists<br />

• Novagen product usage in peer-reviewed journals<br />

• detailed product descriptions<br />

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Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Cell Division/Cell Cycle/Cell Adhesion<br />

Cell Division/Cell Cycle/Cell Adhesion<br />

Cell Adhesion <strong>Inhibitor</strong>s<br />

Cell adhesion is crucial in the formation and maintenance<br />

of coherent multi-cellular structures. Two<br />

major types of cell adhesion processes are seen in multicellular<br />

organisms: cell-cell adhesion where physical<br />

bonds are formed between adjacent cells, and cell-matrix<br />

adhesion where cells bind to adhesive proteins in the<br />

extracellular matrix (ECM). A wide variety of adhesion<br />

molecules have been identified that fall into four major<br />

categories: cadherins, immunoglobulin (Ig)-like adhesion<br />

molecules, integrins, and selectins. Cell adhesion<br />

proteins are often transmembrane receptors that have<br />

domains extending into both the extracellular space and<br />

the intracellular space.<br />

Cadherins are the main mediators of Ca 2+ -dependent cellcell<br />

adhesion. Cadherin-mediated cell-cell adhesion is<br />

accomplished by homophilic protein-protein interactions<br />

between two cadherin molecules on cell surface. This<br />

interaction is mediated by interactions between the<br />

His-Ala-Val domains and between Trp residues and<br />

hydrophobic pockets in amino-terminal cadherin<br />

domains. Cadherins are critical in segregating embryonic<br />

cells into tissues.<br />

The Ig superfamily of cell adhesion molecules (CAM)<br />

is expressed in a wide variety of cell types, including<br />

neurons, leukocytes, epithelial, and endothelial cells.<br />

Collectively, they function by both homophilic and<br />

heterophilic binding. Their heterogeneous expression<br />

pattern implicates them in diverse biological processes,<br />

such as brain development, immune responses, tissue<br />

sorting, morphogenesis, and development of the vascular<br />

network. They are characterized by the presence of one<br />

or more Ig-like domain in their extracellular region.<br />

In addition, the ectodomain of Ig-CAMs may contain<br />

various numbers of fibronectin type III (FNIII) repeats,<br />

which possess the Arg-Gly-Asp (RGD) cell attachment<br />

site. Neural cell adhesion molecules (N-CAMs) and the<br />

intercellular cell adhesion molecules (ICAMs) are the beststudied<br />

members of this family.<br />

Integrins belong to a superfamily of non-covalently bound<br />

heterodimeric membrane receptor glycoproteins. They are<br />

composed of a variable a-subunit of 150-170 kDa and a<br />

conserved 95 kDa b-subunit. Although both subunits are<br />

required for adhesion, the binding specificity primarily<br />

depends on the extracellular portion of the a-subunit.<br />

While generally classified as adhesion molecules, integrins<br />

also play an important role in signal transduction. Signal<br />

transduction through integrins occurs in two directions:<br />

from the extracellular microenvironment into the cell<br />

(outside-in signaling), and from the cytoplasm to the<br />

extracellular domain of the receptor (inside-out signaling).<br />

Among the signaling molecules involved in integrinmediated<br />

cell survival is focal adhesion kinase (FAK),<br />

which is activated following integrin ligation. It activates<br />

downstream survival pathways, such as PI 3-kinase, Akt,<br />

and MAPK/ERK. In response to specific stimuli, integrins<br />

that are generally diffused over the cell surface cluster in<br />

focal contacts. Their combined affinities create a region<br />

with sufficient adhesive capacity to adhere to the ECM. This<br />

allows cells to bind to a large numbers of matrix molecules<br />

simultaneously while still maintaining their ability to<br />

explore their environment.<br />

Selectins are expressed primarily on leukocytes and<br />

endothelial cells. They play an important role in host<br />

defense mechanisms. In contrast to other CAMs, selectins<br />

bind to carbohydrate ligands. Hence, the resulting binding<br />

forces are relatively weak. This allows selectin-mediated<br />

interactions between leukocytes and endothelial cells and<br />

promotes rolling of the leukocytes along the endothelium.<br />

L-selectins are expressed on most leukocytes, E-selectins<br />

are inducible on vascular endothelium upon stimulation<br />

with cytokines, and P-selectins are found on activated<br />

platelets and vascular endothelium.<br />

Dysregulation of several CAMs, particularly the Ig-<br />

CAMs, has been linked to tumor progression and<br />

metastasis, making them a suitable target for therapeutic<br />

intervention. Also, increased expression of CAMs<br />

on the vascular endothelium is postulated to play an<br />

important role in atherogenesis. CAMs also play critical<br />

roles in the recruitment and migration of cells to sites<br />

of inflammation. Hence, these molecules have become<br />

targets for the development of drugs for treatment of<br />

cancer, inflammation, and autoimmune diseases.<br />

References:<br />

Cavallaro, U., and Christofori, G. 2004. Nat. Rev. Cancer 4, 8.<br />

Aplin, A.E., et al. 999. Curr. Opin. Cell Biol. 11, 737.<br />

Meredith, J.E., et al. 997. Trends Cell Biol. 7, 46.<br />

Ruoslahti, E., and Obrink, B. 996. Exp. Cell Res. 227, .<br />

Law, D.A., et al. 996. J. Biol. Chem. 271, 08 .<br />

Flores, M.E., et al. 996. Exp. Cell Res. 227, 40.<br />

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69


Cell Division/Cell Cycle/Cell Adhesion<br />

Cell Adhesion <strong>Inhibitor</strong>s<br />

Product Cat. No. Comments Size Price<br />

H-Arg-Gly-Asp-OH 03-34-0029 (Arginyl-glycyl-aspartic Acid; RGD)<br />

Amino acid sequence within fibronectin that mediates cell attachment.<br />

H-Arg-Gly-Asp-Ser-OH 03-34-0002 (Fibronectin <strong>Inhibitor</strong>; RGDS)<br />

Shown to inhibit fibronectin function by binding to platelet-binding sites.<br />

BAY -7082 196870 {(E)3-[(4-Methylphenyl)sulfonyl]-2-propenenitrile}<br />

Potential anti-inflammatory agent. Selectively and irreversibly inhibits the<br />

TNFa-inducible phosphorylation of IkBa (IC 50 = 0 mM) without affecting the<br />

constitutive IkBa phosphorylation. Decreases nuclear translocation of NF-kB<br />

and inhibits TNFa-induced surface expression of the endothelial-leukocyte cell<br />

adhesion molecules E-selectin, VCAM- , and ICAM- .<br />

BAY -7085 196872 {(E)3-[(4-t-Butylphenyl)sulfonyl]-2-propenenitrile}<br />

Exhibits biological properties similar to that of BAY -7082 (Cat. No. 96870). BAY<br />

-7085 has also been shown to have potent anti-inflammatory properties in vivo.<br />

Cell Sheet Migration<br />

<strong>Inhibitor</strong><br />

Cell Sheet Migration<br />

<strong>Inhibitor</strong>, Negative<br />

Control<br />

Cyclo(Arg-Gly-Asp-D-<br />

Phe-Val)<br />

219469 {(4S)-3-[(E)-But-2-enoyl]-4-benzyl-2-oxazolidinone; UIC-1005<br />

A cell-permeable N-(crotonyl)oxazolidinone compound that acts as a potent,<br />

reversible inhibitor of eukaryotic cell migration and growth (IC 50 = 4 mM for<br />

inhibition of wound closure in MDCK cell monolayers). May serve as a useful tool<br />

for studying motility-related signaling pathways.<br />

219470 [(4S)-3-butyryl-4-benzyl-2-oxazolidinone; UIC-1017]<br />

A cell-permeable N-(butyryl)oxazolidinone compound that serves as a negative<br />

control for the Cell Sheet Migration <strong>Inhibitor</strong> (Cat. No. 2 9469). Displays little bioactivity<br />

in wound closure and cell proliferation studies (IC ≥ 500 mM for wound<br />

50<br />

closure in MDCK cell monolayers).<br />

182015 (RGDFV Peptide, Cyclic)<br />

Potent inhibitor of cell adhesion. Inhibits tumor cell adhesion to laminin and<br />

vitronectin substrates.<br />

FR- 05-23-1701 (CRGDSPASSC, Cyclic)<br />

A cyclic peptide containing the cell binding domain Arg-Gly-Asp and associated<br />

cell migration Pro-Ala-Ser-Ser sequences of fibronectin. A potent inhibitor of ADPinduced<br />

platelet aggregation (IC 50 = 7.6 mM).<br />

H-Gly-Arg-Ala-Asp-<br />

Ser-Pro-OH<br />

H-Gly-Arg-Gly-Asp-<br />

Ser-OH<br />

H-Gly-Arg-Gly-Asp-<br />

Ser-Pro-OH<br />

H-Gly-Arg-Gly-Asp-<br />

Thr-Pro-OH<br />

03-34-0052 (GRADSP)<br />

Inactive control peptide for fibronectin inhibitors.<br />

03-34-0027 (GRGDS)<br />

A cell-binding protein domain that competitively inhibits direct binding of<br />

fibroblasts to fibronectin. Also, reported to inhibit the migration of vascular<br />

smooth muscle cells into fibrin gels.<br />

03-34-0035 (GRGDSP)<br />

Shown to inhibit fibronectin binding to platelet-binding sites.<br />

03-34-0055 (GRGDTP)<br />

Inhibits binding of fibrinogen, fibronectin, vitronectin, and von Willebrand factor<br />

to platelets. Also inhibits cell attachment to collagen, fibronectin, and vitronectin.<br />

Pentoxifylline 516354 [3,7-Dihydro-3,7-dimethyl-1-(5-oxohexyl)-1H-purine-2,6-dione; PTX]<br />

A non-selective phosphodiesterase inhibitor that inhibits the adhesion of T cells to<br />

the b and b 2 integrin ligands VCAM- and ICAM- .<br />

P-Selectin Antagonist 561308 (Galloyl-N-gaba-WVDV-OH)<br />

A specific, high affinity inhibitor of human P-selectin ligand (IC 50 = 5.4 nM).<br />

Displays weaker affinity towards mouse P-selectin, human L, and E-selectins.<br />

Shown to block monocyte-derived HL-60 cell adhesion to P-selectin-transfected<br />

CHO cells (EC 50 = 74 nM).<br />

25 mg $77<br />

25 mg $ 05<br />

0 mg $68<br />

0 mg $88<br />

0 mg $ 2<br />

5 mg $73<br />

mg $ 56<br />

mg $95<br />

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Web www.emdbiosciences.com/calbiochem<br />

5 mg<br />

25 mg<br />

$47<br />

$ 77<br />

25 mg $227<br />

5 mg<br />

25 mg<br />

5 mg<br />

25 mg<br />

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$46<br />

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500 mg $28<br />

5 mg $ 52


DNA Methyltransferase <strong>Inhibitor</strong>s<br />

DNA methylation is one of the most prevalent epigenetic<br />

modifications of DNA in mammalian genomes. It is<br />

achieved by DNA methyltransferases that catalyze<br />

the addition of a methyl group from S-adenosyl-<br />

L-methionine to the 5-carbon position of cytosine.<br />

Methylation at cytosine plays an important role in<br />

regulating transcription and chromatin structure.<br />

Methylated DNA can trigger chromatin reorganization<br />

mediated by methyl-binding proteins. Four families<br />

of DNA methyltransferase genes have been identified<br />

in humans. They include Dnmt1, Dnmt2, and Dnmt3b,<br />

which encode proteins with different functional<br />

specificities. Dnmt1 is constitutively expressed in<br />

proliferating cells and its inactivation results in<br />

demethylation of genomic DNA and embryonic death.<br />

Dnmt2 is expressed at low levels in adult tissues.<br />

Its inactivation does not affect DNA methylation or<br />

maintenance of methylation. Dnmt3a and Dnmt3b are<br />

strongly expressed in embryonic stem cells, but are<br />

down-regulated in differentiating embryonic stem cells<br />

and in adult somatic cells.<br />

Most mammalian transcription factors bind GC-rich DNA<br />

elements, and methylation within these elements reduces<br />

their ability to bind. CpG methylation is shown to induce<br />

histone deacetylation, chromatin remodeling, and gene<br />

silencing through a transcription repressor complex.<br />

DNA Methyltransferase <strong>Inhibitor</strong>s<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Cell Division/Cell Cycle/Cell Adhesion<br />

CpG islands are often located around the promoters of<br />

housekeeping genes and are not methylated. On the<br />

contrary, the CG sequences in inactive genes are usually<br />

methylated to suppress their expression.<br />

Aberrant DNA methylation has been linked to several<br />

pathological conditions. Mutations in DNA methyltransferase<br />

3b are known to cause ICF (immunodeficiency,<br />

centromere instability and facial anomalies) syndrome.<br />

Overexpression of DNA methyltransferases has been<br />

implicated in the development of several tumors. About<br />

25% of all mutations in the p53 gene in human cancers<br />

are reported to occur at CpG sites. Methylation of these<br />

sites can inactivate and silence tumor suppressor genes.<br />

Abnormal DNA methylation also occurs during aging and<br />

alters gene activity, thus affecting a variety of cellular<br />

functions.<br />

References:<br />

Stresemann, C. et al. 2006. Cancer Res. 66, 2794.<br />

Lee, W.J. et al. 2005. Mol. Pharmacol. 68, 0 8.<br />

Lyko, F., and Brown R. 2005. J. Natl. Cancer Inst. 97, 498.<br />

Lehmann, U., et al. 2004. Ann. Hematol. 83, 37.<br />

Paz, M.F., et al. 2003. Human Mol. Genetics 12, 2209.<br />

Robertson, K.D. 200 . Oncogene 20, 3 39.<br />

Xu, G.L., et al. 999. Nature 402, 87.<br />

Okano, M., et al. 998. Nucleic Acids Res. 28, 2536.<br />

Issa, J.P., et al. 993. J. Natl. Cancer Inst. 85, 235.<br />

Product Cat. No. Comments Size Price<br />

5-Aza-2´-Deoxycytidine 189825 (5-Aza-CdR; 5-Aza-dC; 5-Deoxy-2´-azacytidine)<br />

A cytosine analog that acts as a DNA methyltransferase inhibitor. Also enhances<br />

apoptosis induced by histone deacetylase inhibitors.<br />

N DNA Methyltransferase<br />

<strong>Inhibitor</strong><br />

(–)-Epigallocatechin<br />

Gallate<br />

More online... www.calbiochem.com/inhibitors/DNAm<br />

260920 2-(1,3-Dioxo-1,3-dihydro-2H-isoindol-2-yl)-3-(1H-indol-3-yl)propionic acid; RG108<br />

A cell-permeable specific inhibitor of DNA methyltransferases (IC 50 = 5 nM for<br />

CpG methylase M.SssI) and displays anti-proliferative properties. Suggested to<br />

directly target the enzyme active sites, block DNA methylation, and re-activate<br />

tumor suppressor genes.<br />

324880 A polyphenolic compound with antitumor, anti-inflammatory, and anti-oxidant<br />

properties. An inhibitor of Dnmt1 (IC 50 = 2 0-470 nM).<br />

N InSolution Sinefungin 567051 (A9145; Adenosyl-ornithine; SF)<br />

A 0 mM (2 mg/524 ml) solution of Sinefungin in H 2 O. An anti-leishmanial<br />

nucleoside antibiotic that acts as an S-adenosyl-L-methionine (SAM, AdoMet)<br />

methyltransferase-specific inhibitor.<br />

Zebularine 691400 [2-Pyrimidone-1-b-D-riboside; 1-(b-D-Ribofuranosyl)-1,2-dihydropyrimidin-2-one]<br />

A chemically stable cytidine analog that displays antitumor properties. An inhibitor<br />

of DNA methylation and tumor growth both in vitro and in vivo. Also acts as<br />

transition state analog inhibitor of cytidine deaminase by binding at the active site<br />

as covalent hydrates.<br />

25 mg $ 78<br />

0 mg $ 24<br />

0 mg $39<br />

2 mg $ 39<br />

0 mg<br />

25 mg<br />

$ 2<br />

$258<br />

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Cell Division/Cell Cycle/Cell Adhesion<br />

DNA and RNA Polymerase <strong>Inhibitor</strong>s<br />

DNA polymerases build DNA by forming a<br />

phosphodiester bond between the 5´a-phosphate of one<br />

deoxyribonucleotide and the 3´-hydroxyl of another.<br />

They cannot initiate DNA synthesis de novo, but add<br />

deoxynucleotides, one at a time, to the 3´-hydroxyl<br />

terminus of a preexisting DNA or RNA strand (a primer).<br />

Most DNA polymerases require a template bound to the<br />

primer, and extend the primers by synthesizing strands<br />

complementary to the template; while most prefer DNA<br />

templates, reverse transcriptase prefers RNA templates.<br />

Some DNA polymerases, such as terminal transferase,<br />

are template-independent. RNA polymerases build<br />

(transcribe) RNA strands by forming a phosphodiester<br />

bond between the 5´a-phosphate of one ribonucleotide<br />

and the 3´-hydroxyl of another. DNA template-dependent<br />

RNA polymerases can initiate RNA strand synthesis de<br />

novo, yielding complementary RNA transcripts. Poly-<br />

A polymerase is template-independent, and adds A<br />

residues to the 3´-hydroxyl termini of preexisting RNA<br />

transcripts. Retroviruses specify reverse transcriptases,<br />

which are RNA-dependent DNA polymerases that reverse<br />

transcribe the retroviral RNA genome into DNA.<br />

DNA and RNA Polymerase <strong>Inhibitor</strong>s<br />

<strong>Inhibitor</strong>s of DNA and RNA polymerases are invaluable<br />

tools in both clinical and research settings. The use of<br />

DNA and RNA polymerase inhibitors aids in delineating<br />

the mechanistic aspects of transcription and DNA<br />

replication, in defining structure-function relationships,<br />

and in protein turnover studies. Characterizing<br />

mutations that can confer resistance to antibiotics<br />

can help identify the genomic loci that encode for the<br />

respective subunit of the target enzyme. As DNA and<br />

RNA polymerases are among the most attractive drug<br />

targets, the knowledge about these inhibitors, their<br />

structures, and their modes of action provides the basis<br />

for design of new drugs/antibiotics that will be effective<br />

against new pathogens and antibiotic-resistant mutants<br />

of known pathogens. Because some of these agents block<br />

specific steps (transcription) in the processes that lead<br />

from DNA to protein, their use can help delineate the role<br />

of transcriptional control in regulating the expression<br />

of target genes in health and disease. Furthermore, some<br />

of these inhibitors can be used in studies requiring the<br />

synchronization of the cell cycle; also since some have<br />

been reported to induce and/or inhibit apoptosis, these<br />

represent valuable tools for apoptosis-related studies.<br />

Product Cat. No. Comments Size Price<br />

Actinomycin D,<br />

Streptomyces sp.<br />

Actinomycin D, 7-<br />

Amino-<br />

a-Amanitin, Amanita<br />

sp.<br />

Methyl a-Amanitin<br />

Oleate<br />

114666 (Dactinomycin)<br />

Antineoplastic antibiotic that inhibits DNA-primed RNA polymerase by complexing<br />

with DNA via deoxyguanosine residues. At higher concentrations, DNA polymerase<br />

is inhibited.<br />

129935 (7-AAD; 7-Amino-AMD; 7-Aminoactinomycin C 1 ; 7-Aminodactinomycin)<br />

A membrane impermeable fluorescent DNA intercalator. Inhibits RNA polymerase<br />

far more specifically than DNA polymerase.<br />

129741 A potent and specific inhibitor of RNA polymerase II and mRNA synthesis in higher<br />

eukaryotes.<br />

454559 A semi-synthetic derivative of a-Amanitin, Amanita sp. (Cat. No. 2974 ) that is<br />

about 30-fold more cell-permeable than a-Amanitin.<br />

Aphidicolin 178273 A cell synchronization agent that blocks the cell cycle at the early S-phase.<br />

Specific inhibitor of DNA polymerase a and d in eukaryotic cells and in some<br />

viruses of animal origin.<br />

N HSV Replication<br />

<strong>Inhibitor</strong>, BP5<br />

Novobiocin, Sodium<br />

Salt<br />

385883 Disrupts the interaction between the catalytic subunit UL30 (Pol) and the<br />

processing subunit UL42 of herpes simplex virus DNA polymerase (IC 50 ~4 mM).<br />

491207 A DNA gyrase inhibitor that can be used for the production of positively<br />

supercoiled plasma DNA. Targets the nucleotide-binding site of gyrase B. Inhibits<br />

retrovirus RNA-dependent DNA polymerases.<br />

Rifampicin 557303 [3-(4-Methylpiperazinyliminomethyl)rifamycin SV; Rifampin]<br />

Antibiotic that specifically inhibits DNA-dependent bacterial RNA polymerase by<br />

forming an inactive complex with RNA polymerase. Does not affect mammalian<br />

RNA polymerase.<br />

RNA Polymerase III<br />

<strong>Inhibitor</strong><br />

More online... www.calbiochem.com/inhibitors/DNARNA<br />

557403 {N-[1-(3-(5-Chloro-3-methylbenzo[b]thiophen-2-yl-1-methyl-1H-pyrazol-5-yl)]-2chlorobenzenesulfonamide;<br />

ML-60218}<br />

A cell-permeable broad spectrum inhibitor of RNA polymerase III (IC 50 = 27 mM and<br />

32 mM for human and S. cerevisiae RNA polymerase III, respectively).<br />

72 Orders Phone 800 854 34 7<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Fax 800 776 0999<br />

Web www.emdbiosciences.com/calbiochem<br />

5 mg<br />

set<br />

$73<br />

$ 22<br />

mg $ 3<br />

mg $ 64<br />

00 mg $87<br />

mg $74<br />

0 mg $90<br />

g<br />

0 g<br />

g<br />

5 g<br />

$27<br />

$ 50<br />

$59<br />

$228<br />

0 mg $ 52


Histone Acetylase and Deacetylase <strong>Inhibitor</strong>s<br />

Gene expression, to a large extent, is controlled by a host<br />

of protein complexes that continuously pack and unpack<br />

the chromosomal DNA from the inaccessible, tightly<br />

packed nucleosomal particles to the accessible, unwound<br />

nucleosomal particles. This packing and unpacking is<br />

achieved by the acetylation and deacetylation of the<br />

histones in the nucleosomal core. Acetylated histone<br />

proteins confer accessibility of the DNA template to<br />

the transcriptional machinery for expression. Histone<br />

acetylation has been linked to gene-specific activation<br />

by transcription factors. It plays an important role in<br />

cell cycle control and has been linked to uncontrolled<br />

cell proliferation. Histone deacetylases (HDAC), on the<br />

other hand, are chromatin-remodeling factors that act<br />

as transcriptional repressors or silencers of genes.<br />

They regulate histone acetylation by catalyzing the<br />

removal of acetyl groups on the amino terminal lysine<br />

residues of the core nucleosomal histones. In humans<br />

at least 16 different HDACs have been reported that<br />

are subdivided into Class I (HDAC 1, 2, 3, and 8); Class<br />

II (HDAC 4, 5, 6, 7, 9, and 10), and Class III (SIRT 1-<br />

7). Class I HDACs are widely expressed in tissues,<br />

Histone Acetylase and Deacetylase <strong>Inhibitor</strong>s<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Cell Division/Cell Cycle/Cell Adhesion<br />

and are primarily located in the nucleus. Class II<br />

HDACs are much larger in size and display limited<br />

tissue distribution. They can shuttle between the<br />

nucleus and cytoplasm. Class III HDACs consist of a<br />

large family of sirtuins (silent information regulators<br />

or SIR) that are evolutionarily distinct, with unique<br />

enzymatic mechanisms dependent on NAD + . Studies<br />

have shown that certain oncogenes repress transcription<br />

by recruitment of HDACs. This has led to the interest<br />

in small molecules that act as inhibitors of HDAC and<br />

have potential for the treatment of cancer. They act as<br />

potent inducers of growth arrest, differentiation, and<br />

apoptotic cell death in a variety of transformed cells in<br />

culture and in tumor bearing animals. They are shown<br />

to increase the DNA-binding activities of AP1, CREB,<br />

and NF-kB transcription factors and are also reported to<br />

down-regulate telomerase activity via suppression<br />

of hTERT mRNA expression. The best-studied inhibitor<br />

of HDAC is Trichostatin A, a hydroxamic acid that<br />

complexes with zinc and mediates the acetamide<br />

cleavage at the catalytic site.<br />

References:<br />

Acharya, M. R., et al. 2005. Mol. Pharmacol. 68, 9 7.<br />

Mei, S. et al. 2004. Int. J. Oncol. 25, 509.<br />

Suenaga, M., et al. 2002. Int. J. Cancer 97, 62 .<br />

Marks, P.A., et al. 200 . Curr. Opin. Oncol. 13, 477.<br />

Yoshida, M., et al. 200 . Cancer Chemother. Pharmacol. 48 ( Suppl ):S20.<br />

Jung. M., et al. 200 . Curr. Med. Chem. 8, 505.<br />

Pandolfi, P.P., 200 . Cancer Chemother. Pharmacol. 48 (Suppl ), S 7.<br />

Munster, P.N., et al. 200 . Cancer Res. 61, 8492.<br />

Product Cat. No. Comments Size Price<br />

Anacardic Acid 172050 (AA; 2-Hydroxy-6-pentadecylbenzoic Acid; 6-Pentadecylsalicylic Acid)<br />

A cell-permeable salicylic acid analog that acts as a potent, non-competitive<br />

inhibitor of p300 and PCAF (p300/CBP-associated factor) histone<br />

acetyltransferase (HAT) activities (IC 50 ~8.5 mM and ~5 mM, respectively).<br />

Apicidin, Fusarium sp. 178276 {cyclo-[L-(2-Amino-8-oxodecanoyl)-L-(N-methoxytryptophan)-L-isoleucyl-Dpipecolinyl]}<br />

Histone Deacetylase<br />

<strong>Inhibitor</strong> I<br />

More online... www.calbiochem.com/inhibitors/HAD<br />

A potent, cell-permeable inhibitor of histone deacetylase (IC 50 = 700 pM for<br />

parasitic histone deactetylase).<br />

382147 {N-(2-Aminophenyl)-4-[N-(pyridine-3-ylmethoxycarbonyl)aminomethyl]benzamide;<br />

MS-275}<br />

A benzamide analog that acts as a histone deacetylase inhibitor (IC 50 = 2.0 mM)<br />

and exhibits anti-tumor properties. Suitable for use in both in vitro and in vivo<br />

applications.<br />

0 mg $79<br />

mg<br />

5 mg<br />

mg<br />

5 mg<br />

$87<br />

$226<br />

$52<br />

$ 74<br />

Technical Support<br />

Phone 800 628 8470<br />

E-mail calbiochem@emdbiosciences.com<br />

73


Cell Division/Cell Cycle/Cell Adhesion<br />

Histone Acetylase and Deacetylase <strong>Inhibitor</strong>s, continued<br />

Product Cat. No. Comments Size Price<br />

Histone Deacetylase 382148 (m-Carboxycinnamic Acid bis-Hydroxamide; CBHA)<br />

5 mg —<br />

<strong>Inhibitor</strong> II<br />

A second-generation hybrid polar agent that has been shown to inhibit the<br />

activities of histone deacetylase (HDAC) and 3 (ID = 0 nM and 7 nM,<br />

50<br />

respectively) in MEL DS 9/Sc9 cells. The HDAC inhibition is believed to arise as a<br />

result of the binding of the hydroxamic moiety to the active site zinc. Not available<br />

for sale in the United States.<br />

Histone Deacetylase 382149 [4-Dimethylamino-N-(6-hydroxycarbamoylhexyl)benzamide; N-Hydroxy-7-(4-dimethy mg $93<br />

<strong>Inhibitor</strong> III<br />

laminobenzoyl)aminoheptanamide; M344]<br />

An amide analog of Trichostatin A (Cat. No. 647925) that potently inhibits histone<br />

deacetylase (IC = 40 nM for rat liver HDAC and IC = 00 nM for maize HDAC).<br />

50 50<br />

5 mg $284<br />

ITSA 419840 [N-(1H-Benzotriazol-1-yl)-2,4-dichlorobenzamide; <strong>Inhibitor</strong> of Trichostatin A 1]<br />

A cell-permeable benzotriazole amide that can be used to counteract Trichostatin<br />

A-induced cell cycle arrest, histone acetylation, and transcription activation.<br />

25 mg $79<br />

mg $87<br />

5 mg $297<br />

Oxamflatin 499700 {(2E)-5-[3-(Phenylsulfonylamino)phenyl]pent-2-en-4-ynohydroxamic Acid}<br />

An aromatic sulfonamide derivative with a hydroxamic acid group that potently<br />

inhibits mammalian histone deacetylase (IC 50 = 5.7 nM). Acts as a ligand for the<br />

enzyme active site metal ion.<br />

SBHA 559418 (Suberic Bishydroxamate; Suberoyl Bishydroxamic Acid)<br />

A histone deacetylase (HDAC) inhibitor with anti-tumor properties. Reported to<br />

cause an increase in acetylated histone H4 in MEL cells. Also reported to inhibit<br />

human HDAC and HDAC3 activities with a similar potency (ID ~250–300 nM).<br />

50<br />

Not available for sale in the United States.<br />

Scriptaid 565730 {CGK1026; 6-(1,3-Dioxo-1H,3H-benzo[de]isoquinolin-2-yl)-hexanoic Acid<br />

Hydroxyamide<br />

A relatively non-toxic hydroxamic acid-containing histone deacetylase (HDAC)<br />

inhibitor. Causes over 00-fold increase in histone acetylation in PANC- cells at<br />

6 mM.<br />

Sirtinol 566320 {2-[(2-Hydroxynaphthalen-1-ylmethylene)amino]-N-(1-phenethyl)benzamide; Sir Two<br />

<strong>Inhibitor</strong> Naphthol}<br />

A cell-permeable, specific, and a direct inhibitor of the sirtuin class of histone<br />

deacetylase (HDAC) activity. Does not affect human HDAC . Reported to block<br />

Sir2p transcriptional silencing activity in vivo (IC = 25 mM) and NAD-dependent<br />

50<br />

HDAC activity in purified recombinant yeast Sir2p and human SIRT2 in vitro<br />

(IC = 68 mM and 38 mM, respectively).<br />

50<br />

N InSolution Sirtinol 566321 {2-[(2-Hydroxynaphthalen-1-ylmethylene)amino]-N-(1-phenethyl)benzamide; Sir Two<br />

<strong>Inhibitor</strong> Naphthol}<br />

A 0 mM ( mg/254 ml) solution of Sirtinol (Cat. No. 566320) in DMSO.<br />

Splitomicin 567750 (1,2-Dihydro-3H-naphtho[2,1-b]pyran-3-one)<br />

A cell-permeable, selective inhibitor of NAD + -dependent histone deacetylase<br />

activity of Sir2 protein (IC = 60 mM). It creates a conditional phenocopy of a Sir2<br />

50<br />

deletion mutant in S. cerevisiae and sensitizes mammalian cells to a variety of<br />

DNA-damaging agents by abrogating Sir2p activity on p53. Acts by either altering<br />

or blocking access to the acetylated histone binding pocket.<br />

Trichostatin A,<br />

Streptomyces sp.<br />

N InSolution Trichostatin<br />

A, Streptomyces sp.<br />

Valproic Acid, Sodium<br />

Salt<br />

647925 (4,6-Dimethyl-7-[p-dimethylaminophenyl]-7-oxahepta-2,4-dienohydroxamic Acid; TSA)<br />

A potent and reversible inhibitor of histone deacetylase.<br />

647926 A 0 mM (500 mg/ 65 ml) solution of Trichostatin A, Streptomyces sp.<br />

(Cat. No. 647925) in DMSO.<br />

676380 (2-Propylpentanoic Acid, Na)<br />

A cell-permeable, short-chain fatty acid that inhibits histone deacetylase<br />

(IC = 400 mM for HDAC ). Induces differentiation and inhibits proliferation<br />

50<br />

of cell lines derived from human malignant gliomas.<br />

00 mg —<br />

5 mg $96<br />

5 mg $ 6<br />

mg $58<br />

5 mg $ 03<br />

mg $ 56<br />

500 mg $90<br />

5 g $48<br />

74 Orders Phone 800 854 34 7<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Fax 800 776 0999<br />

Web www.emdbiosciences.com/calbiochem


Related Products<br />

Histone Deacetylase Activity Assay Kit,<br />

Colorimetric<br />

A rapid, two-step assay that measures histone deacetylase (HDAC)<br />

activity in cell lysates. Deacetylation by HDAC results in a sensitized<br />

substrate that, when treated with the lysine developer, produces<br />

a chromophore that can be measured at 400 or 405 nm by a<br />

spectrophotometer or a plate reader. kit = 00 assays<br />

Cat. No. 382166 1 kit $372<br />

N Histone Deacetylase, Human, Recombinant,<br />

S. frugiperda<br />

Recombinant human histone deacetylase 3 (HDAC3) expressed in<br />

insect cells using a baculovirus expression system. HDAC3 is a class I<br />

histone deacetylase that regulates gene expression by deacetylation<br />

of histones and nonhistone proteins. It is suggested that HDACs play<br />

an important role in transcriptional regulation, cell cycle progression<br />

and activation, and biological processes in eukaryotes that involve<br />

chromatin.<br />

Cat. No. 382169 5000 U $345<br />

Histone Deacetylase, Rat Liver<br />

An enzymatically active, partially purified, histone deacetylase<br />

from rat liver. Useful in radioactive and in nonradioactive assays of<br />

histones. Can be useful to test the potency of HDAC inhibitors.<br />

Cat. No. 382165 2 ml $284<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Cell Division/Cell Cycle/Cell Adhesion<br />

Histone Deacetylase Activity Assay Kit,<br />

Fluorometric<br />

A rapid, two-step assay that measures histone deacetylase (HDAC)<br />

activity in cell lysates. Deacetylation by HDAC results in a sensitized<br />

substrate that, when treated with the lysine developer, produces a<br />

fluorophore that can be measured at 440-460 nm by a fluorometer or<br />

a fluorescence plate reader. kit = 00 assays<br />

Cat. No. 382167 1 kit $350<br />

Histone Deacetylase HD2, Maize<br />

An enzymatically active, highly purified, histone deacetylase (HDAC)<br />

from maize embryos. Shown to be useful for screening of HDAC<br />

<strong>Inhibitor</strong>s (IC 50 = 7.2 nM for TSA, 0 nM for Trapoxin, 50 nM for SAHA,<br />

and 0 nM for HC-Toxin). Reported to be a multimer-protein complex<br />

that dissociates into three polypeptides (p39, p42, and p45) upon<br />

denaturation.<br />

Cat. No. 382168 500 ml $303<br />

To download free Interactive Pathways screensavers<br />

visit us at www.calbiochem.com/screensavers<br />

Technical Support<br />

Phone 800 628 8470<br />

E-mail calbiochem@emdbiosciences.com<br />

75


Cell Division/Cell Cycle/Cell Adhesion<br />

Nuclear Import/Export <strong>Inhibitor</strong>s<br />

Proteins required for nuclear functions are specifically<br />

transported from the cytoplasm into the nucleus.<br />

In general, proteins larger than 25 nm in diameter<br />

(~30 kDa) can only enter the nucleus in an energydependent<br />

process, which calls for the participation of<br />

a variety of soluble import factors. Trafficking between<br />

the nucleus and the cytoplasm occurs via the nuclear<br />

pore complexes (NPCs). NPCs are large supramolecular<br />

assemblies of ~125 MDa and contain about 100<br />

polypeptides embedded in the double-membrane nuclear<br />

envelope. The NPCs allow passive diffusion of ions and<br />

small molecules, whereas nuclear proteins, RNAs, and<br />

ribonucleoproteins larger than ~9 nm in diameter are<br />

selectively and actively transported by a signal-mediated<br />

and energy-dependent mechanism. The signal for import<br />

is provided by a peptide sequence in the encoded protein<br />

known as the nuclear localization signal (NLS).<br />

The presence of several different NLSs and import<br />

factors suggests the existence of multiple pathways<br />

for such an import.<br />

A number of nuclear transport receptors known as<br />

importins (karyopherins), transportins, and Ran-binding<br />

proteins recognize the NLS and mediate “docking” at the<br />

nuclear pore. Importin-a (karyopherin-a), the cytoplasmic<br />

receptor for NLS-bearing proteins, binds importin-b via<br />

a specific binding domain. Importin-b interacts with the<br />

importin-a bound to the NLS and acts as a carrier of the<br />

NLS/importin-a/b trimer. This trimeric complex docks<br />

to the cytoplasmic filaments of the NPC via importin-b.<br />

Subsequent passage of import substrates from the NPC into<br />

the nuclear interior requires the small GTPase, Ran, which<br />

plays a crucial role in both import/export pathways and<br />

determines the directionality of nuclear transport. Once<br />

in the nucleus, importin-b binds RanGTP and the import<br />

complex is disassembled and the substrate is retained in<br />

Nuclear Import/Export <strong>Inhibitor</strong>s<br />

the nucleus. Ran is reported to shuttle between the nucleus<br />

and the cytoplasm. Recycling of Ran is essential for nuclear<br />

transport. In the cytoplasm, Ran is maintained primarily in<br />

its GDP-bound form to facilitate import. On the other hand,<br />

in the nucleus, Ran is bound to GTP through RCC1, which<br />

facilitates export of proteins.<br />

Malfunctioning of the nucleo-cytoplasmic transport is<br />

profoundly involved in a number of diseases. Defects<br />

in NPC components have been implicated in several<br />

autoimmune disorders and cancers. At least 11 chromosomal<br />

rearrangements in acute leukemia involve nuclear pore<br />

protein (nucleoporin) genes. Leukemias associated with<br />

nucleoporin gene rearrangements have been reported to be<br />

more refractory to therapeutic intervention.<br />

References:<br />

Menendez, S., et al. 2003. Br. J. Cancer 88, 636.<br />

Weis, K. 2003. Cell 112, 44 .<br />

Kroon, E., et al. 200 . EMBO J. 20, 350.<br />

Arai, Y., et al. 2000. Leukemia 14, 62 .<br />

Barry, D.M., and Wente, S.R. 2000. Essays Biochem. 36, 89.<br />

Fontoura, B. M. A., 2000. J. Biol. Chem. 275, 3 289.<br />

Talcott, B., and Moore, M.S. 2000. J. Biol. Chem. 275, 0099.<br />

Nakielny, S., and Dreyfuss, G. 999. Cell 99, 677.<br />

Stoffler, D., et al. 999. Curr. Opin. Cell Biol. 11, 39<br />

Kutay, U., et al. 997. Cell 90, 06 .<br />

Gorlich, D., et al. 995. Nature 377, 246.<br />

More online... www.calbiochem.com/inhibitors/nuclear<br />

Product Cat. No. Comments Size Price<br />

InSolution Leptomycin 431051 (ATS1287 A; LMA)<br />

mg $ 52<br />

A, Streptomyces sp.<br />

Supplied as a mg/200 ml solution in 70% methanol. An antifungal antibiotic<br />

that acts as an inhibitor of nuclear export. Shown to inhibit nucleo-cytoplasmic<br />

translocation of human immunodeficiency virus type regulatory protein (Rev) at<br />

nanomolar concentrations.<br />

InSolution Leptomycin 431050 (LMB)<br />

mg $3 3<br />

B, Streptomyces sp.<br />

Supplied as a 5 mg/ml ( mg/200 ml) solution in 70% methanol. A potent inhibitor<br />

of CRM -mediated (exportin- ) nuclear export. Shown to inhibit nucleocytoplasmic<br />

translocation of human immunodeficiency virus type regulatory<br />

protein (Rev) at nanomolar concentrations and block Rev-dependent export of<br />

mRNA into the cytoplasm. Useful for studies involving nuclear localization and<br />

protein trafficking in eukaryotic cells.<br />

76 Orders Phone 800 854 34 7<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Fax 800 776 0999<br />

Web www.emdbiosciences.com/calbiochem


Nuclear Import/Export <strong>Inhibitor</strong>s, continued<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Cell Division/Cell Cycle/Cell Adhesion<br />

Product Cat. No. Comments Size Price<br />

InSolution Ratjadone 553590 Supplied as a 5 mg/ml (2 mg/400 ml) solution in methanol. A cell-permeable<br />

2 mg $ 95<br />

A, Synthetic<br />

polyketide with antitumor properties. Originally identified as a metabolite from<br />

the myxobacterium Sorangium cellulosum for its antibiotic activities against<br />

yeasts and filamentous fungi, ratjadones inhibit nuclear export of LR-NES (leucine<br />

rich-nuclear export signal)-containing proteins by covalently binding to CRM<br />

(Chromosome region maintenance ).<br />

Nuclease <strong>Inhibitor</strong>s<br />

Product Cat. No. Comments Size Price<br />

Aurintricarboxylic Acid 189400 A cell-permeable, polyanionic, polyaromatic compound used as a powerful<br />

inhibitor of cellular processes that are dependent on the formation of proteinnucleic<br />

acid complexes. Binds to acidic fibroblast growth factor (aFGF) and reduces<br />

its angiogenic activity. Shown to inhibit apoptotic cell death in various cell types<br />

induced by a variety of factors. ATA is a potent inhibitor of DNA topoisomerase II<br />

(IC = 75 nM for the yeast enzyme as measured by relaxation assays) that also acts<br />

50<br />

as a potent inhibitor of angiogenesis. Stimulates the tyrosine phosphorylation of<br />

MAP kinases, Shc proteins, phosphatidylinositol 3-kinase, and phospholipase Cg.<br />

Inhibits both major calpain isoforms (IC = 22 mM and IC = 0 mM for m-calpain<br />

50 50<br />

and m-calpain, respectively).<br />

00 mg $34<br />

Diethyl Pyrocarbonate 298711 DEPC, Diethyl Oxydiformate<br />

Useful for specific inactivation of nucleases during isolation of undegraded<br />

polynucleotides.<br />

N DNA Base Excision<br />

Repair Pathway<br />

<strong>Inhibitor</strong><br />

DNase g <strong>Inhibitor</strong>,<br />

6-DTAF<br />

Ribonuclease <strong>Inhibitor</strong>,<br />

Human Placenta<br />

Ribonuclease <strong>Inhibitor</strong>,<br />

Human, Recombinant,<br />

E. coli<br />

262015 [7-Nitroindole-2-carboxylic acid]<br />

A cell-permeable, potent, specific, and nontoxic inhibitor of the DNA repair<br />

enzyme, APE (human apurinic/apyrimidinic endonuclease; IC 50 ~3 mM). Shown<br />

to target the APE active site and inhibit its 3'-phosphodiesterase and 3'phosphatase<br />

activities. Exhibits minimal effects on endonuclease IV, BamHI<br />

restriction endonuclease, or topoisomerase I at 00 mM. Also shown to potentiate<br />

the cytotoxicity of several DNA damaging agents, such as MMS, temozolomide,<br />

Zeocin, and H 2 O 2 in HeLa, HT 080, and MDA-MB-23 cells.<br />

260905 4-(4,6-Dichloro-[1,3,5]-triazin-2-ylamino)-2-(6-hydroxy-3-oxo-3H-xanthen-9-yl)benzoic<br />

acid; 6-(4,6-Dichlorotriazinyl)aminofluorescein; DR396<br />

A potent and selective inhibitor of DNase g, human (IC = 3.2 mM).<br />

50<br />

556883 A tight-binding potent inhibitor of pancreatic ribonuclease and angiogenin. Plays<br />

an important role in the control of mRNA degradation and gene expression.<br />

Consists of seven leucine-rich internal repeats, each with 57 amino acid residues.<br />

The molecular weight, immunoreactivity and amino acid composition of rhPRI are<br />

identical to those of native PRI.<br />

556881 Non-competitive inhibitor that inactivates RNase by non-covalent binding. Has<br />

been used to improve cDNA synthesis and in vitro RNA synthesis, increase yields of<br />

polysomes, and aid in the preparation of RNase-free antibodies. Inhibits RNases A,<br />

B, and C. Does not inhibit RNase T and S nuclease from Aspergillus.<br />

25 g<br />

00 g<br />

$76<br />

$273<br />

25 mg $77<br />

0 mg $90<br />

2500 U $89<br />

2500 U $ 08<br />

Technical Support<br />

Phone 800 628 8470<br />

E-mail calbiochem@emdbiosciences.com<br />

77


Cell Division/Cell Cycle/Cell Adhesion<br />

Poly(ADP-ribose) Polymerase (PARP) and Poly(ADP-ribose)<br />

Glycohydrolase (PARG) <strong>Inhibitor</strong>s<br />

Poly(ADP-ribosyl)ation (pADPr) is a covalent posttranslational<br />

modification process that occurs during<br />

DNA repair, replication, and transcription. It is brought<br />

about by poly(ADP-ribose)polymerases (PARP), which are<br />

activated by breaks in DNA strands. PARPs are a group<br />

of Zn 2+ -binding multi-functional enzymes that catalyze<br />

the transfer of ADP-ribose (ADPr) units onto protein<br />

acceptors to produce linear and/or branched polymers<br />

of ADPr. Upon binding to DNA strand breaks, activated<br />

PARP cleaves NAD + into nicotinamide and ADP-ribose<br />

and polymerizes ADP-ribose onto nuclear acceptor<br />

proteins, such as histones and transcription factors.<br />

The “classical” 113 kDa type I PARP is the major<br />

contributor of the poly(ADP-ribosyl)ating activity in<br />

higher eukaryotes. Type II PARP is smaller than the<br />

classical zinc-finger-containing PARP and is believed to<br />

participate in DNA repair during apoptosis. Type III PARP<br />

is a large protein containing ankyrin repeats and a PARP<br />

catalytic domain.<br />

PARP consists of three domains: a DNA-binding domain<br />

(DBD), an automodification domain, and a catalytic<br />

domain. The DBD, a 42 kDa N-terminal region, extends<br />

from the initiator Met to Thr 373 in human PARP. It<br />

contains two zinc fingers and two helix-turn-helix motifs<br />

and is rich in basic residues, which are involved in the<br />

interaction of the enzyme with DNA. The automodi-<br />

fication domain located in the central region, resides<br />

between Ala 374 and Leu 525 in human PARP. A BRCT<br />

(BRCA1 C-terminus) domain that lies between Ala 384<br />

and Ser 479 and consists of about 95 amino acids is found<br />

in several proteins that regulate cell-cycle checkpoints<br />

and DNA repair. BRCT domains are protein-protein<br />

interaction modules that allow BRCT-motif-containing<br />

proteins to establish strong and specific associations. The<br />

C-terminal catalytic domain, a 55 kDa segment, spans<br />

residues Thr 526 to Trp 1014 in human PARP. The catalytic<br />

activity of this fragment is not stimulated by DNA<br />

strand breaks. It corresponds only to the basal activity<br />

of the native enzyme. The ADPr transferase activity<br />

has been confined to a 40 kDa region at the extreme<br />

C-terminus of the enzyme, which is referred to as the<br />

minimal catalytic domain. This region can catalyze the<br />

initiation, elongation, and branching of ADPr polymers<br />

independently of the presence of DNA. The deletion of the<br />

last 45 amino acids at the C-terminal end of this domain<br />

completely abolishes enzyme activity. Residues spanning<br />

positions Leu 859 to Tyr 908 in human PARP are well<br />

conserved and comprise the “PARP signature” sequence.<br />

The extent of poly(ADP-ribosyl)ation is an important<br />

determinant of NAD + levels in cells. In normal,<br />

undamaged cells, NAD + levels range from 400 to<br />

500 mM. However, PARP activation following DNA<br />

damage by radiation or cytotoxic agents reduces NAD +<br />

levels to about 100 mM within about 15 minutes. It<br />

is believed that during its automodification PARP<br />

becomes more charged, since each residue of ADPr<br />

adds two negative charges on to the molecule. This<br />

establishes an electro-repulsive gradient between<br />

the polymers of ADPr which are covalently linked to<br />

the enzyme and DNA. When the charge becomes too<br />

negative, the reaction reaches a “point of repulsion”<br />

and the interaction between PARP and DNA is lost. The<br />

poly(ADP-ribosyl)ated PARP molecule is consequently<br />

freed from the DNA strand break and its catalytic<br />

activity is abolished. Subsequently, poly(ADP-ribose)<br />

glycohydrolase (PARG) hydrolyses the polymers present<br />

on PARP, thereby allowing it to resume a new cycle<br />

of automodification in response to DNA damage. The<br />

presence of PARG during PARP automodification restores<br />

both its affinity for DNA and its catalytic activity.<br />

DNA damage, the single most important factor in the<br />

regulation of pADPr reactions, can stimulate the catalytic<br />

activity of PARP by about 500-fold. Inhibition of PARP<br />

is shown to reduce DNA repair, increase the cytotoxicity<br />

of DNA-damaging agents, and enhance apoptosis. The<br />

cytotoxicity of PARP inhibitors is due to an increase in the<br />

half-life of DNA strand break, which increases genomic<br />

instability. PARP cleavage by caspase-3 is considered as an<br />

early event in apoptotic cell death. PARP degradation has<br />

also been reported during necrosis, although believed to be<br />

through a different process.<br />

References:<br />

Masutani, M., et al. 2003. Genes Chromosomes Cancer 38, 339.<br />

Chiarugi, A. 2002. Trends Pharmacol. Sci. 23, 22.<br />

Virag. L., and Szabo, C. 2002. Pharmacol. Rev. 54, 375.<br />

Burkle, A. 200 . BioEssays 23, 795.<br />

Davidovic, L. 200 . Exp. Cell Res. 268, 7.<br />

Tong, W.M., et al. 200 . Biochim. Biophys. Acta 1552, 27.<br />

DíAmours, D., et al. 999. Biochem. J. 342, 249.<br />

Shieh, W.M., et al. 998. J. Biol. Chem. 273, 30069.<br />

Mazen, A., et al. 989. Nucleic Acids Res. 17, 4689.<br />

Alkhatib, H.M.., et al. 987. Proc. Natl. Acad. Sci. USA 84, 224.<br />

More online... www.calbiochem.com/inhibitors/PARP<br />

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Cell Division/Cell Cycle/Cell Adhesion<br />

Poly(ADP-ribose) Polymerase (PARP) and Poly(ADP-ribose) Glycohydrolase (PARG) <strong>Inhibitor</strong>s<br />

Product Cat. No. Comments Size Price<br />

ADP-HPD, Dihydrate,<br />

Ammonium Salt<br />

3-Aminobenzamide 165350 (3-ABA)<br />

4-Amino- ,8naphthalimide<br />

5-Aminoisoquinolinone,<br />

Hydrochloride<br />

118415 [Adenosine 5´-diphosphate (Hydroxymethyl)pyrrolidinediol, NH 4 ]<br />

An amino analog of ADP-ribose that acts as a highly potent, noncompetitive, and<br />

specific inhibitor of PARG (IC 50 = 20 nM) vs. ADP-ribose (IC 50 = 20 mM).<br />

An inhibitor of PARP that has minimal effect on bacterial toxin-mediated<br />

ADP-ribosylation.<br />

164585 (4-ANI)<br />

A potent inhibitor of poly(ADP-ribose) polymerase (PARP) (IC 50 = 80 nM)<br />

that significantly potentiates the cytotoxicity effects of g-irradiation.<br />

164300 [5-AIQ, HCl; 5-Aminoisoquinolin-1(2H)-one, HCl]<br />

A cell-permeable, water-soluble analog of isoquinoline that acts as a potent and<br />

specific inhibitor of PARP (IC 50 = 240 nM for PARP isolated from calf thymus).<br />

Reported to inhibit hydrogen peroxide-induced PARP activity in human cardiac<br />

myoblasts (Girardi cells) (IC 50 ~ 0 mM).<br />

DPQ 300270 {3,4-Dihydro-5[4-(1-piperindinyl)butoxy]-1(2H)-isoquinoline}<br />

A very potent and selective poly(ADP-ribose)polymerase (PARP) inhibitor<br />

(IC 50 = 40 nM).<br />

EB-47 324473 A cell-permeable, adenosine-substituted, isoindolinone compound that acts as a<br />

potent inhibitor of PARP- (IC 50 = 45 nM).<br />

5-Iodo-6-amino- ,2benzopyrone<br />

407850 (INH 2 BP)<br />

A lipophilic PARP inhibitor that offers protection against peroxynitrite and<br />

hydroxyl radicals in vitro and in vivo. Abrogates peroxynitrite-induced mitochodrial<br />

transmembrane potential (Dy m ) reduction.<br />

,5-Isoquinolinediol 419800 [1,5-Dihydroxyisoquinoline; 5-Hydroxy-1(2H)-isoquinoline]<br />

A potent inhibitor of poly(ADP-ribose) polymerase (PARP; IC = 390 nM).<br />

50<br />

NU 025 493800 (8-Hydroxy-2-methylquinazoline-4-one)<br />

A potent inhibitor of PARP (IC = 400 nM) that potentiates the cytotoxicity of<br />

50<br />

various DNA-active agents, including the DNA-methylating compound MTIC, the<br />

DNA strand break-inducing drug temozolomide, topotecan, bleomycin, and ionizing<br />

radiation in murine L 2 0 leukemia cells, Chinese hamster ovary cells, and in a<br />

variety of human tumor cell lines.<br />

PJ34 528150 A potent anti-inflammatory agent and an inhibitor of PARP (EC 50 = 20 nM).<br />

Shown to be about 0,000-fold more potent than the prototypical PARP inhibitor,<br />

3-Aminobenzamide (Cat. No. 65350) (EC 50 = 200 mM).<br />

TIQ-A 612100 (4H-Thieno[2,3-c]isoquinolin-5-one)<br />

A cell-permeable, potent inhibitor of PARP (IC 50 = 450 nM for bovine recombinant<br />

PARP- ).<br />

Related Products<br />

PARP <strong>Inhibitor</strong> Set<br />

Provided as a 5 vial set. Each set contains 00 mg of 3-Aminobenzamide<br />

(Cat. No. 65350) and 5 mg each of 5-Iodo-6-amino- ,2-benzopyrone<br />

(Cat. No. 407850), ,5-Isoquinolinediol (Cat. No. 4 9800), and NU 025<br />

(Cat. No. 493800), and mg of DPQ (Cat. No. 300270).<br />

Cat. No. 528820 1 set $293<br />

PARP Cleavage Detection Kit<br />

60 mg<br />

set<br />

$496<br />

$ 36<br />

00 mg $35<br />

00 mg $48<br />

mg<br />

5 mg<br />

$52<br />

$ 64<br />

mg $76<br />

mg $73<br />

5 mg $57<br />

5 mg $62<br />

5 mg $ 27<br />

mg<br />

5 mg<br />

$55<br />

$ 69<br />

mg $79<br />

An assay kit designed to detect poly(ADP-ribose) polymerase (PARP)<br />

cleavage by Western blotting. During apoptosis, PARP is cleaved by<br />

caspase-3. Cleavage of PARP from the native 6 kDa to 85 kDa is a<br />

hallmark of apoptosis. Each kit is provided with a highly specific rabbit<br />

polyclonal antibody that detects 6 kDa PARP and the 85 kDa apoptosisrelated<br />

cleavage fragment from human, bovine, rat, and mouse.<br />

Cat. No. 512729 1 kit $273<br />

Technical Support<br />

Phone 800 628 8470<br />

E-mail calbiochem@emdbiosciences.com<br />

79


Cell Division/Cell Cycle/Cell Adhesion<br />

Telomerase <strong>Inhibitor</strong>s<br />

Telomerase is a specialized ribonucleoprotein composed<br />

of a catalytic subunit telomerase reverse transcriptase<br />

(TERT), and two other subunits known as telomerase<br />

associated protein 1 (TP1), and a ~445-nucleotide long<br />

telomerase RNA component (TR). Telomerase stabilizes<br />

telomere lengths by adding hexameric (TTAGGG) repeats<br />

to the ends of chromosomes, thereby circumventing<br />

the cumulative damage that normally occurs during<br />

mitotic cell division. Telomerase recognizes the G-rich<br />

strand of an existing telomere repeat sequence and<br />

elongates it in the 5´-to-3´ direction. Progressive loss of<br />

telomeres, a key feature of normal cells, is considered to<br />

be a major regulator of cellular senescence. Tumor cells<br />

overcome this problem by overexpressing telomerase.<br />

As cancer cells divide more often, on an average, they<br />

possess shorter telomeres than normal cells. Hence,<br />

without an active telomerase to maintain telomere<br />

length, cancer cells could reach critically short telomere<br />

at a faster pace than normal cells. Telomerase activity,<br />

which is practically undetectable in normal cells, is<br />

detected in the majority of tumor cells. The presence<br />

of telomerase activity is correlated with poor clinical<br />

outcome in cancer patients. Hence, telomerase inhibitors<br />

Telomerase <strong>Inhibitor</strong>s<br />

are considered as potential therapeutic agents for the<br />

management of tumor progression.<br />

Promising approaches for telomerase inhibition include<br />

the use of mutant dominant/negative versions of human<br />

TERT (hTERT) and the use of antisense oligonucleotides<br />

directed against the template RNA component (hTR) of<br />

the telomerase holoenzyme. These telomerase inhibitors<br />

reduce telomerase activity and lead to progressive<br />

shortening of telomeres with each cell division,<br />

ultimately causing cells to undergo apoptosis.<br />

References:<br />

Altshuler, M.L., et al. 2003. Biochemistry (Mosc). 68, 275.<br />

Mokbel, K. 2003. Curr. Med. Res. Opin. 19, 470.<br />

Wu, X., et al. 2003. J. Natl. Cancer Inst. 95, 2 .<br />

Gomez, D., et al. 2002. Cancer Res. 62, 3365.<br />

Shay, J.W., et al. 200 . Hum. Mol. Gen. 10, 677.<br />

Rahat, M.A., et al. 999. Cancer 85, 9 9.<br />

Roos, G., et al. 998. Int. J. Cancer 79, 343.<br />

Wen, J., et al. 998. Mol. Diagn. 3, 29.<br />

Kim, N.W. 997. Eur. J. Cancer 33, 78 .<br />

Shay, J.W. 997. J. Cell. Physiol. 173, 266.<br />

Harrington, L., et al. 997. Science 275, 973.<br />

Product Cat. No. Comments Size Price<br />

3´-Azido-3´-<br />

deoxythymidine<br />

InSolution AZT,<br />

Triphosphate,<br />

Tetralithium Salt<br />

3´-Deoxy-2´,3´-<br />

didehydrothymidine<br />

Ellipticine, 9-Hydroxy-,<br />

Hydrochloride<br />

(–)-Epigallocatechin<br />

Gallate<br />

More online... www.calbiochem.com/inhibitors/telomerase<br />

194348 (AZT)<br />

<strong>Inhibitor</strong> of HIV- reverse transcriptase that blocks the incorporation of<br />

nucleotides into newly synthesized DNA. Causes irreversible telomere shortening.<br />

194950 (AZTTP)<br />

A reverse transcriptase inhibitor that acts by docking to the active site of HIVreverse<br />

transcriptase. Also reported to inhibit telomerase activity in vitro<br />

(IC 50 = 30 mM).<br />

257920 A reverse transcriptase inhibitor that causes a consistent and rapid telomere<br />

shortening in vegetatively growing Tetrahymena.<br />

324680 (9-HE, HCl)<br />

An antitumor alkaloid that is reported to inhibit telomerase activity in cultured<br />

pancreatic cancer cells, in a time- and concentration-dependent manner,<br />

possibly through inhibition of protein kinases. It also acts as a potent inhibitor of<br />

topoisomerase II (IC 50 = 3.3 mM).<br />

324880 {EGCG; (2R,3R)-2-(3,4,5-Trihydroxyphenyl)-3,4-dihydro-1[2H]-benzopyran-3,5,7triol-3-(3,4,5-trihydroxybenzoate)}<br />

A polyphenolic constituent of green tea with potent antitumor, anti-inflammatory,<br />

and antioxidant properties. Strongly and directly inhibits telomerase activity in<br />

cell-free systems and in cancer cell lines.<br />

PIPER 528120 {N,N´-bis[2-(1-Piperidino)ethyl]-3,4,9,10-perylenetetracarboxylic Diimide; Telomerase<br />

<strong>Inhibitor</strong> IV}<br />

A perylene-based ligand that potently inhibits human telomerase activity by<br />

binding to G-quadruplex DNA. The strongest binding site for PIPER appears to be<br />

the 3'-boundary of the G-quadruplex. Can also bind non-specifically to nucleic<br />

acids.<br />

0 mg $39<br />

mmol $ 60<br />

25 mg $76<br />

0 mg $55<br />

0 mg $39<br />

0 mg $85<br />

80 Orders Phone 800 854 34 7<br />

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Telomerase <strong>Inhibitor</strong>s, continued<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Cell Division/Cell Cycle/Cell Adhesion<br />

Product Cat. No. Comments Size Price<br />

Telomerase <strong>Inhibitor</strong> III,<br />

Sodium Salt<br />

Telomerase <strong>Inhibitor</strong><br />

III, Negative Control,<br />

Sodium Salt<br />

Telomerase <strong>Inhibitor</strong> VI,<br />

Sodium Salt<br />

581004 [5´-d(TTAGGG)-3´; TAG-6]<br />

A short hexameric phosphorothioate oligonucleotide (PS-ODN) telomere mimic<br />

that inhibits telomerase activity in cell lysates and lengthens cell doubling time in<br />

vitro and in vivo at concentrations less than 2.5 mM.<br />

581007 [5´-d(TGTGAG)-3´]<br />

A control containing scrambled sequence of the short hexameric phosphorothioate<br />

oligonucleotide PS-ODN (Cat. No. 58 004). Useful as a control in experiments to<br />

show the specificity of PS-ODN-mediated biological effects.<br />

581006 (5´-CAGUUAGGGUUAG-3´; 2´-O-MeRNA)<br />

A 3-nucleotide 2'-O-MeRNA possessing terminal phosphorothioate linkages.<br />

Potently inhibits telomerase activity (IC 50 = 2 nM at 23˚C and 3 nM at 37˚C).<br />

Telomerase <strong>Inhibitor</strong> IX 581011 [N,N´-bis(2,3-Dihydroxybenzoyl)-1,3-phenylenediamine; MST-312]<br />

A cell-permeable, potent, and reversible inhibitor of telomerase activity<br />

(IC = 670 nM, TRAP lysate prepared from U937 cells). Prolonged treatment with<br />

50<br />

MST-3 2 has been reported to result in telomere shortening and growth arrest in<br />

U937 cells. Does not inhibit the activity of Taq DNA polymerase (IC > 3 mM).<br />

50<br />

TMPyP4 613560 [meso-5,10,15,20-Tetrakis-(N-methyl-4-pyridyl)porphine, Tetratosylate]<br />

A potent inhibitor of human telomerase (IC = 6.5 mM). TMPyP4 binds strongly<br />

50<br />

to DNA quadruplexes by stacking on the G-tetrads at the core of the quadruplex,<br />

resulting in telomerase inhibition. Fluoresces highly in the presence of quadruplex<br />

DNA.<br />

To view our collection of telomerase-related antibodies,<br />

visit our antibody resource<br />

www.calbiochem.com/antibodyresource<br />

50 nmol $75<br />

50 nmol $76<br />

00 nmol $ 53<br />

0 mg $ 03<br />

25 mg $73<br />

Technical Support<br />

Phone 800 628 8470<br />

E-mail calbiochem@emdbiosciences.com<br />

8


Cell Division/Cell Cycle/Cell Adhesion<br />

Topoisomerase Related <strong>Inhibitor</strong>s<br />

DNA topoisomerases are nuclear enzymes that regulate<br />

the conformational changes in DNA topology by<br />

catalyzing the breakage and rejoining of DNA strands<br />

during the normal cell cycle. They relieve torsional<br />

stress during replication and transcription. The catalytic<br />

cycle of the enzyme consists of DNA cleavage to form a<br />

covalent enzyme-DNA intermediate, DNA relaxation,<br />

and re-ligation of the phosphate backbone to restore<br />

the continuity of the DNA. Three different types of<br />

topoisomerases have been reported in humans; Type I<br />

(91-kDa monomer), Type IIa (170-kDa dimer), and Type<br />

IIb (180-kDa dimer). Simpler organisms possess only<br />

topoisomerase I; however, higher organisms have all<br />

three types of topoisomerases. While topoisomerase<br />

IIa is present in all eukaryotes, IIb is present only in<br />

vertebrates and appears to be closely associated with cell<br />

differentiation, but not proliferation. Topoisomerases<br />

act by catalyzing the breakdown and rejoining reactions<br />

in the phosphodiester backbone of DNA. Topoisomerase<br />

I reversibly cleaves a single strand in duplex DNA<br />

molecule, whereas topoisomerase II breaks and rejoins<br />

both DNA strands.<br />

During the past few years topoisomerases have<br />

become important chemotherapeutic targets for<br />

cancer treatment. Several novel compounds have been<br />

Topoisomerase Related <strong>Inhibitor</strong>s<br />

developed that can target either topoisomerase I or<br />

topoisomerase IIa-/IIb- isoforms, or all three types<br />

of topoisomerases. Inhibition of topoisomerase II is<br />

considered to be more challenging due to the complexity<br />

of interactions. Most inhibitors of topoisomerase II<br />

block the ligation step, leading to stabilized “cleavable<br />

complexes” between DNA and the enzyme. Most enzyme<br />

inhibitors function by docking into the enzyme active<br />

site or nearby allosteric site to block the reaction of<br />

the normal substrate. Inhibition of topoisomerase II<br />

involves two parts: the aromatic part of the inhibitor<br />

molecule intercalates between DNA base pairs and<br />

another more polar portion interacts with topoisomerase.<br />

Because topoisomerase II inhibitors (e.g., doxorubicin<br />

and etoposide) act as poisons rather than as classical<br />

competitive inhibitors, their action is dependent upon the<br />

level of the enzyme in cells. Rapidly proliferating cells,<br />

which contain relatively higher levels of topoisomerase II,<br />

appear to be more sensitive to these agents.<br />

References:<br />

Leppard, J. B., and Champoux, J. J. 2005. Chromosoma 114, 75.<br />

Topcu, Z. 200 . J. Clin. Pharm. Ther. 26, 405.<br />

Felix, C.A. 200 . Med. Pediatr. Oncol. 36, 525.<br />

Bakshi, R.P., et al. 200 . Crit. Rev. Biochem. Mol. Biol. 36, .<br />

Champoux, J.J. 2000. Ann. N. Y. Acad. Sci. 922, 56.<br />

Fortune, J.M., and Osheroff, N. 2000. Prog. Nucleic Acid Res. Mol. Biol. 64, 22 .<br />

Product Cat. No. Comments Size Price<br />

N Acetyl- -keto-b-<br />

Boswellic Acid,<br />

Boswellia serrata<br />

110123 (3-O-Acetyl-11-keto-b-Boswellic Acid; AKBA; AKbBA)<br />

Reported to inhibit calf thymus topoisomerase I ( ≥ 0 mM).<br />

AG 387 658520 [AG 555, 5-Iodo; a-Cyano-(3,4-dihydroxy)-5-iodo-N-(3-phenylpropyl)cinnamide; 2-<br />

Cyano-3-(3,4-dihydroxy-5-iodo-phenyl)-N-(3-phenylpropyl)acrylamide]<br />

Aurintricarboxylic Acid 189400 (ATA)<br />

Camptothecin,<br />

Camptotheca<br />

acuminata<br />

Camptothecin, 0-<br />

Hydroxy-, Camptotheca<br />

acuminata<br />

Daunorubicin,<br />

Hydrochloride<br />

An analog of tyrphostin AG 555 (Cat. No. 658404) that acts as an inhibitor of EGFR<br />

tyrosine kinase and of DNA topoisomerase I.<br />

A polyanionic, polyaromatic compound that inhibits apoptotic cell death in various<br />

cell types induced by a variety of factors. A potent inhibitor of DNA topoisomerase II.<br />

208925 {4-Ethyl-4-hydroxy-1H-pyrano[3´,4´:6,7]indolizino[1,2-b]quinoline-<br />

3,14(4H,12H)dione}<br />

More online... www.calbiochem.com/inhibitors/topoisomerase<br />

A reversible DNA topoisomerase I inhibitor that binds to and stabilizes the<br />

topoisomerase-DNA covalent complex.<br />

390238 (HCPT; 10-Hydroxycamptothecin)<br />

A powerful DNA topoisomerase I inhibitor that reduces DNA synthesis in murine<br />

hepatoma cells. Has a selective inhibitory effect on the phosphorylation of<br />

histones H and H3, but is less effective on other histones.<br />

251800 (Daunomycin, HCl)<br />

Potent anticancer agent that inhibits RNA and DNA synthesis by intercalating into<br />

DNA. Inhibits eukaryotic topoisomerase I and II.<br />

5 mg $ 68<br />

5 mg $87<br />

00 mg $34<br />

50 mg $62<br />

25 mg $92<br />

5 mg $6<br />

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Topoisomerase Related <strong>Inhibitor</strong>s, continued<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Cell Division/Cell Cycle/Cell Adhesion<br />

Product Cat. No. Comments Size Price<br />

Doxorubicin,<br />

Hydrochloride<br />

324380 (Adriamycin; 14-Hydroxydaunomycin, HCl)<br />

An anti-tumor antibiotic and a highly effective myotoxin that inhibits<br />

topoisomerase II (IC 50 = 00 nM).<br />

Ellagic Acid, Dihydrate 324683 (4,4´,5,5´,6,6´-Hexahydroxydiphenic Acid 2,6,2´,6´-Dilactone)<br />

A potent antioxidant with anti-mutagenic and anti-carcinogenic properties.<br />

Inhibits DNA topoisomerases I and II (IC 50 = .8 mM and 2. mM, respectively).<br />

Acts as a potent inhibitor of PKA catalytic subunit (cAK) and PKC (IC 50 = 2 mM and<br />

8 mM respectively).<br />

Ellipticine 324688 (5,11-Dimethyl-6H-pyrido[4,3-b]carbazole)<br />

A topoisomerase II inhibitor. Acts as an intercalative alkaloid that stimulates<br />

topoisomerase II-mediated DNA breakage.<br />

Epirubicin<br />

Hydrochloride<br />

Etoposide 341205 (VP-16)<br />

324905 (4´-Epidoxorubicin, HCl)<br />

A stereoisomer of doxorubicin that exhibits reduced cardiotoxicity. Its antitumor<br />

actions are mediated by targeting topoisomerase II.<br />

A topoisomerase II inhibitor (IC 50 = 59.2 mM) that induces apoptosis in mouse<br />

thymocytes and in HL-60 human leukemia cells.<br />

Etoposide Phosphate 341206 A water-soluble derivative of the topoisomerase II inhibitor, etoposide<br />

(Cat. No. 34 205).<br />

Genistein 345834 (4´,5,7-Trihydroxyisoflavone)<br />

An inhibitor of protein tyrosine kinases (IC 50 = 2.6 mM for EGFR tyrosine kinase)<br />

that also inhibits topoisomerase II activity in vitro.<br />

Merbarone 445800 [NSC-336628; 5-(N-Phenylcarboxamido)-2-thiobarbituric Acid]<br />

An anticancer drug that inhibits the catalytic activity of DNA topoisomerase II<br />

(topo II) without damaging DNA or stabilizing DNA-topo II cleavable complexes<br />

(IC 50 = 20 mM for purified mammalian topoisomerase II versus IC 50 ~200 mM for<br />

topoisomerase I).<br />

Suramin, Sodium Salt 574625 A competitive inhibitor of reverse transcriptase that also blocks the activity of<br />

topoisomerase I and II.<br />

Topotecan,<br />

Hydrochloride<br />

614800 {9-[(Dimethylamino)methyl]-10-hydroxy-(20S)-camptothecin, HCl}<br />

A water-soluble, semi-synthetic derivative of camptothecin (Cat. No. 208925).<br />

A potent DNA topoisomerase I inhibitor. Has been shown to exhibit antitumor<br />

activity against several forms of cancer.<br />

0 mg $ 49<br />

500 mg $57<br />

0 mg $64<br />

5 mg $<br />

25 mg $4<br />

5 mg $67<br />

20 mg<br />

50 mg<br />

$73<br />

$ 46<br />

25 mg $77<br />

50 mg<br />

200 mg<br />

$34<br />

$<br />

mg $ 69<br />

Technical Support<br />

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83


Cell Division/Cell Cycle/Cell Adhesion<br />

Did you know Calbiochem carries a wide range of<br />

convenient ready-to-use Insolution <strong>Inhibitor</strong>s?<br />

Ready-to-use, InSolution Protein Kinase <strong>Inhibitor</strong>s<br />

Name Cat. No. Comments Size Price<br />

InSolution AMPK <strong>Inhibitor</strong>, Compound C 7 26 Supplied as a 0 mM ( mg/250 ml) solution of AMPK <strong>Inhibitor</strong>, Compound C<br />

(Cat. No. 7 260) in DMSO. Purity: ≥95% by HPLC. M.W. 399.5<br />

InSolution Casein Kinase I <strong>Inhibitor</strong>, D4476 2 8705 Supplied as a 0 mM ( mg/25 ml) solution of Casein Kinase I <strong>Inhibitor</strong>, D4476<br />

(Cat. No. 2 8696) in DMSO. Purity: ≥95% by HPLC. M.W. 398.4<br />

InSolution Casein Kinase II <strong>Inhibitor</strong>, DMAT 2 8706 Supplied as a 0 mM (5 mg/ .05 ml) solution of Casein Kinase II <strong>Inhibitor</strong>, DMAT<br />

(Cat. No. 2 8699), in DMSO. Purity: ≥95% by HPLC. M.W. 476.8<br />

InSolution GSK-3b <strong>Inhibitor</strong> VIII 36 557 Supplied as a 25 mM (5 mg/649 ml) solution of GSK-3b <strong>Inhibitor</strong> VIII (Cat. No.<br />

36 549) in DMSO. Purity: ≥95% by HPLC. M.W. 308.3<br />

InSolution JAK <strong>Inhibitor</strong> I 420097 Supplied as a 0 mM (500 mg/ 62 ml) solution of JAK <strong>Inhibitor</strong> I (Cat. No. 420099)<br />

in DMSO. Purity: ≥98% by HPLC. M.W. 309.3<br />

InSolution p38 MAP Kinase <strong>Inhibitor</strong> III 506 48 Supplied as a 0 mM ( mg/247 ml) solution of p38 MAP Kinase <strong>Inhibitor</strong> III<br />

(Cat. No. 506 2 ) in DMSO. Purity: ≥98% by HPLC. M.W. 404.5<br />

InSolution PD 58780 5 3036 Supplied as a 0 mM (500 mg/ 5 ml) solution of PD 58780 (Cat. No. 5 3035) in<br />

DMSO. Purity: ≥95% by HPLC. M.W. 330.2<br />

InSolution Rapamycin 5532 Supplied as a 5 mM (500 mg/ 09 ml) solution of Rapamycin (Cat. No. 5532 0) in<br />

DMSO. Purity: ≥98% by TLC. M.W.9 4.2<br />

InSolution Rho Kinase <strong>Inhibitor</strong> 555552 Supplied as a 0 mM (500 mg/ 28 ml) solution of Rho Kinase <strong>Inhibitor</strong><br />

(Cat. No. 555550) in H 2 O. Purity: ≥95% by HPLC. M.W. 392.3<br />

InSolution VEGF Receptor 2 Kinase <strong>Inhibitor</strong> III 676498 Supplied as a 0 mM (500 mg/2 0 ml) solution of VEGF Receptor 2 Kinase<br />

<strong>Inhibitor</strong> III (Cat. No. 676487) in DMSO. Purity: ≥95% by HPLC. M.W. 238.3<br />

More online... www.calbiochem.com/insolution<br />

mg $72<br />

mg $ 2<br />

5 mg $90<br />

5 mg $84<br />

500 mg $83<br />

mg $ 2<br />

500 mg $ 07<br />

500 mg $95<br />

500 mg $90<br />

500 mg $73<br />

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Web www.emdbiosciences.com/calbiochem


Lipid Signaling<br />

Acetyl-CoA Carboxylase (ACC) <strong>Inhibitor</strong>s<br />

Cyclooxygenases (COX) are bifunctional hemoproteins<br />

that catalyze both the bisoxygenation of arachidonic<br />

acid to form PGG 2 and the peroxidative reduction of<br />

PGG 2 to form PGH 2 . Hence, COX has two different active<br />

sites. On one side, it has the cyclooxygenase active<br />

site, and on the opposite side is an entirely separate<br />

peroxidase site, which is required to activate the heme<br />

groups that participate in the cyclooxygenase reaction.<br />

The enzyme complex is a dimer of identical subunits,<br />

two cyclooxygenase active sites and two peroxidase<br />

active sites. COX-1 is a constitutive enzyme associated<br />

with the endoplasmic reticulum. It is responsible<br />

for maintaining normal physiologic function and is<br />

considered as a “housekeeping” enzyme. COX-2 is an<br />

inducible enzyme mainly associated with the nuclear<br />

envelope and is primarily associated with inflammation.<br />

Several cytokines and growth factors increase the<br />

expression of COX-2, mainly at inflammatory sites,<br />

producing prostaglandins, which mediate inflammation,<br />

pain, and fever. Increased expression of COX-2 has been<br />

associated with increased incidence<br />

of colon and breast cancers.<br />

Inflammatory<br />

Non-steroidal anti-inflammatory Signaling<br />

drugs (NSAIDs) exert antiinflammatory<br />

and analgesic<br />

effects through the inhibition of<br />

prostaglandin synthesis by blocking<br />

COX activity. Traditional NSAIDs<br />

inhibit prostaglandin formation through<br />

the inhibition of both COX-1 and COX-2.<br />

Inhibition of COX-1 is not necessary for anti-<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Lipid Signaling<br />

Product Cat. No. Comments Size Price<br />

CoEnzyme A, Trilithium Salt 234101 A reversible inhibitor of acetyl-CoA (IC 50 = 40 nM). 00 mg $ 27<br />

TOFA 613450 5-(Tetradecyloxy)-2-furoic acid<br />

A cell-permeable furoic acid compound that acts as a potent, reversible, and<br />

competitive inhibitor of acetyl-CoA carboxylase (ACC), a key enzyme involved<br />

in the fatty acid biosynthesis. Inhibits cellular fatty acid synthesis in a dosedependent<br />

manner (IC 50 = 4 mM in human breast cancer cell line MCF7). TOFAinduced<br />

reduction in malonyl-CoA is reported to offset the effect of C75<br />

(Cat. No. 34 325) on food intake in fasted mice and on apoptosis in tumor cells.<br />

Cyclooxygenase (COX) <strong>Inhibitor</strong>s<br />

inflammatory and analgesic effects but is thought to<br />

account for much of the toxicity of traditional NSAIDs.<br />

Based on structural differences in the active sites<br />

of these two isozymes, several new drugs have been<br />

developed that specifically inhibit only COX-2 activity.<br />

COX-2 selective inhibitors have the potential to provide<br />

the traditional benefits of NSAID with significantly<br />

reduced incidence of endoscopic ulcers. The selective<br />

COX-2 inhibitors have great clinical significance because<br />

they can allow the preservation of COX-1 activity, which<br />

is essential in maintaining prostaglandins that are<br />

important for normal platelet function and protection<br />

of the gastrointestinal mucosa, and still inhibit COX-2<br />

to reduce inflammation and other pathologic processes.<br />

Due to the consideration of “inflammation as a<br />

factor” there has been an upsurge of interest in COX-2<br />

inhibitors as possible candidates for the treatment of<br />

Alzheimer's disease. NSAIDs are believed to inhibit<br />

human Ab aggregation in vitro and reverse the b-sheet<br />

conformation of preformed (continued…)<br />

PLA2<br />

Activation<br />

COX<br />

COX<br />

PGG 2<br />

Arachidonic<br />

Acid<br />

Prostaglandins<br />

Thromboxane<br />

Inflammation<br />

Pain<br />

Fever<br />

Hypertension<br />

5 mg $2 0<br />

Platelet<br />

Aggregation<br />

Technical Support<br />

Phone 800 628 8470<br />

E-mail calbiochem@emdbiosciences.com<br />

85


Lipid Signaling<br />

Cyclooxygenase (COX) <strong>Inhibitor</strong>s, continued<br />

fibrils. Several epidemiological studies have indeed<br />

shown that groups of people taking NSAIDs, for<br />

unrelated conditions, such as rheumatoid arthritis,<br />

have a reduced incidence of Alzheimer's disease. More<br />

recently, coxibs, highly selective COX-2 inhibitors, have<br />

been linked to abnormalities in vascular function and<br />

regulation of hemostatis/thrombosis. This has rekindled<br />

interest in several other COX-2 inhibitors for pain<br />

management.<br />

Cyclooxygenase (COX) <strong>Inhibitor</strong>s<br />

References:<br />

Fries, S., and Grosser, T., 2005. Hematology 445.<br />

Brune, K., and Hinz, B. 2004. Scand. J. Rheumatol. 33, .<br />

Johnson, A.J., et al. 200 . Adv. Enzyme Regul. 41, 22 .<br />

McGeer, P.L., and McGeer, E.G. 200 . Neurobiol. Aging 22, 799.<br />

Schnitzer, T.J. 200 . Am. J. Med. 110 (Suppl ), S46.<br />

Thomas, T., et al. 200 . NeuroReport 12, 3263.<br />

Weggen, S., et al. 200 . Nature 414, 2 2.<br />

Crofford, L.J., et al. 2000. Arthritis Rheum. 43, 4.<br />

Fournier, D.B., et al. 2000. J. Cell Biochem. 77, 97.<br />

Sugaya, K., et al. 2000. Jpn. J. Pharmacol. 82, 85.<br />

Product Cat. No. Comments Size Price<br />

COX- <strong>Inhibitor</strong>, FR 22047 236005 {4,5-Bis(4-methoxyphenyl-2-[(1-methylpiperazin-4-yl)carbonyl]thiazole,<br />

Hydrochloride; 1-[(4,5-Bis(4-methoxyphenyl-2-thiazoyl)carbonyl]-4methylpiperazine,<br />

Hydrochloride; FR 122047}<br />

A potent, cell-permeable and selective inhibitor of COX- (IC 50 = 28 nM; human<br />

recombinant COX- ). Does not significantly inhibit COX-2 (IC 50 = 65 mM; human<br />

recombinant COX-2).<br />

COX-2 <strong>Inhibitor</strong> I 236011 {LM-1685; Methyl [5-methylsulfonyl-1-(4-chlorobenzyl)-1H-2indolyl]carboxylate}<br />

A potent and selective inhibitor of COX-2 (IC 50 = 650 nM from human<br />

monocytes). Displays only very weak activity against COX- from human<br />

platelets (IC 50 > 0 mM) and in whole blood (IC 50 > 00 mM).<br />

COX-2 <strong>Inhibitor</strong> II 236012 {4-[(5-Difluoromethyl-3-phenyl)-4-isoxazolyl]benzenesulfonamide; SC-791}<br />

A cell-permeable isoxazolyl-benzenesulfonamide compound that acts as a<br />

potent and highly selective inhibitor of COX-2 both in vitro (IC 50 = 4 nM for<br />

hCOX-2 vs. 4 mM for hCOX- ) and in vivo.<br />

Curcumin, Curcuma longa L. 239802 [1,7-Bis(4-hydroxy-3-methoxyphenyl)-1,6-heptadiene-3,5-dione]<br />

<strong>Inhibitor</strong> of 5-LOX (IC 50 = 8 mM) and COX (IC 50 = 52 mM). Exhibits antitumor<br />

and anti-inflammatory properties.<br />

Diclofenac, 4'-Hydroxy- 287845 {2-[((2´,6´-Dichloro-4´-hydroxy)phenyl)amino]benzeneacetic Acid; 4´-OHD}<br />

A metabolite of Diclofenac (Cat. No. 287840). Formed through oxidation of<br />

diclofenac by cytochrome P450 2C9. Specifically blocks COX-2 activity (IC 50 =<br />

6.9 nM).<br />

Diclofenac Sodium 287840 {2-[(2,6-Dichlorophenyl)amino]benzeneacetic Acid, Na}<br />

A potent inhibitor of COX- (IC 50 = 76 nM) and COX-2 (IC 50 = 26 nM). Strongly<br />

inhibits insoluble transthyretin (TTR) amyloid fibril formation.<br />

DuP-697 317500 [5-Bromo-2-(4-fluorophenyl)-3-(4-(methylsulfonyl)phenyl)thiophene]<br />

A potent, irreversible, and time-dependent COX-2 inhibitor. Exhibits over 50-fold<br />

greater inhibitory potency against human and murine recombinant COX-2 (IC 50 =<br />

80 nM and 40 nM at 5 and 0 minutes, respectively) than COX- (IC 50 = 9 mM).<br />

Ebselen 324483 [2-Phenyl-1,2-benzisoselenazol-3(2H)-one; PZ51]<br />

A neuroprotective antioxidant that acts as a non-selective inhibitor of the<br />

cyclooxygenases. An excellent scavenger of peroxynitrite, and a glutathione<br />

peroxidase mimetic.<br />

ETYA 434741 (5,8,11,14-Eicosatetraynoic Acid)<br />

Inhibits COX (ID 50 = 8 mM), 5-LOX (ID 50 = 0 mM), 2-LOX<br />

(ID 50 = 300 nM), and 5-LOX (ID 50 = 200 nM) in whole cells.<br />

More online... www.calbiochem.com/inhibitors/cox<br />

Flurbiprofen 344079 {(±)-2-Fluoro-a-methyl[1,1´-biphenyl]-4-acetic Acid; U-27182}<br />

A non-steroidal anti-inflammatory agent that acts as a potent, but non-selective<br />

COX inhibitor (IC 50 = 5 nM for LPS-induced COX in human peripheral blood cells).<br />

Reduces Ab loads and Congo Red staining in APP+PS transgenic mice.<br />

5 mg $ 30<br />

5 mg $ 73<br />

5 mg $ 8<br />

00 mg $35<br />

00 mg $ 03<br />

g $28<br />

5 mg $ 69<br />

5 mg $64<br />

20 mg $203<br />

00 mg $38<br />

86 Orders Phone 800 854 34 7<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

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Cyclooxygenase (COX) <strong>Inhibitor</strong>s, continued<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Lipid Signaling<br />

Product Cat. No. Comments Size Price<br />

(±)-Ibuprofen 401003 {[(±)-2-(4-Isobutylphenyl)-propionic Acid}<br />

A competitive, and non-selective COX inhibitor (IC 50 = 4.8 mM for COX- and<br />

223 mM for COX-2). Decreases the total Ab secretion (Ab 40 and Ab 42 ) in human<br />

neuronal cells and offers neuroprotection against glutamate-, nitric oxide-, and<br />

superoxide-induced damage.<br />

Indomethacin 405268 [1-(p-Chlorobenzoyl)-2-methoxy-3-methyl-1H-indole-3-acetic Acid]<br />

A non-steroidal anti-inflammatory, anti-pyretic agent. Non-selective COX<br />

inhibitor (IC 50 = 740 nM for COX- and 970 nM for COX-2). Reported to reduce<br />

Ab 42 load independently of COX inhibition.<br />

Indomethacin Amide,<br />

N-Octyl-<br />

Indomethacin Ester, n-<br />

Heptyl-<br />

Indomethacin Ester, 4-<br />

Methoxyphenyl-<br />

405270 [1-(p-Chlorobenzoyl)-5-methoxy-2-methyl-1H-indole-3-octylacetamide]<br />

An N-octylamide derivative of Indomethacin (Cat. No. 405268) that acts as a<br />

potent and selective COX-2 inhibitor (IC 50 = 40 nM) compared to COX-<br />

(IC 50 = 66 mM).<br />

405269 [1-(p-Chlorobenzoyl)-2-methoxy-3-methyl-1H-indole-3-acetic Acid, n-Heptyl Ester]<br />

A heptyl ester derivative of Indomethacin (Cat. No. 405268) that acts as a potent<br />

and selective COX-2 inhibitor (IC 50 = 40 nM) compared to COX- (IC 50 > 66 mM).<br />

405271 [1-(p-Chlorobenzoyl)-5-methoxy-2-methyl-1H-indole-3-acetic Acid, 4-<br />

Methoxyphenyl Ester]<br />

A 4-methoxyphenyl ester derivative of Indomethacin (Cat. No. 405268) that<br />

acts as a potent and selective COX-2 inhibitor (IC 50 = 40 nM) compared to COX-<br />

(IC 50 > 66 mM).<br />

Kaempferol 420345 (3,4´,5,7-Tetrahydroxyflavone)<br />

A phytoestrogen that offers protection against Ab 25–35 -induced cell death in<br />

neonatal cortical neurons. Blocks Ab-induced activation of caspase-2, -3, -8,<br />

and -9. Acts as an inhibitor of COX- (IC 50 = 80 mM) and COX-2 (IC 50 ~ 5 mM).<br />

Meloxicam 444800 [4-Hydroxy-2-methyl-N-(5-methyl-2-thiazoyl)-2H-1,2-benzothiazine-3carboxamide-1,1-dioxide]<br />

Preferentially inhibits COX-2 (IC 50 = 4.7 mM) relative to COX- (IC 50 = 36.6 mM).<br />

Niflumic Acid 481987 {2-[(3-Trifluoromethyl)phenyl]amino]-3-pyridinecarboxylic Acid; UP-83}<br />

A selective inhibitor of COX-2 (K i = 20 nM for sheep placental COX-2).<br />

5-Nitro-2-(3-phenylpropylamino)benzoic<br />

Acid<br />

484100 (NPPB)<br />

A COX inhibitor (IC 50 = 8 µM) that also acts as a potent Cl – channel blocker<br />

(IC 50 = 00 nM - 00 mM), depending on channel subtype and assay method.<br />

NS-398 349254 [N-(2-Cyclohexyloxy-4-nitrophenyl)methanesulfonamide]<br />

Selective inhibitor of COX-2 (IC 50 = 3.8 mM for sheep placental COX-2).<br />

Reduces neuronal damage following a stroke.<br />

N Pterostilbene, Pterocarpus<br />

marsupium<br />

Radicicol, Diheterospora<br />

chlamydosporia<br />

523310 (trans-3,5-Dimethoxy-4´-hydroxystilbene)<br />

A cell-permeable methoxylated analog of Resveratrol (Cat. No. 554325) that<br />

inhibits COX- and COX-2 activities (IC = 9.8 mM and 83.9 mM, respectively).<br />

50<br />

553400 Inhibits the expression of COX-2 (IC = 27 nM) without affecting COX-<br />

50<br />

expression in LPS-stimulated macrophages.<br />

Resveratrol 554325 (trans-3,4´,5-Trihydroxystilbene)<br />

A phenolic product with antifungal, antitumor, and antioxidative properties.<br />

A specific inhibitor of COX- (ED = 5 mM). Also inhibits the hydroxyperoxidase<br />

50<br />

activity of COX- (ED = 3.7 mM).<br />

50<br />

SC-560 565610 [5-(4-Chlorophenyl)-1-(4-methoxyphenyl)-3-trifluoromethylpyrazole]<br />

A highly potent and selective inhibitor of COX- (IC = 9 nM). Inhibits COX-2<br />

50<br />

activity only at higher concentrations (IC = 6.3 mM).<br />

50<br />

SKF-86002 567305 {6-(4-Fluorophenyl)-2,3-dihydro-5-(4-pyridyl)imidazo[2,1-b]thiazole}<br />

A cytokine-suppressive anti-inflammatory drug that also acts as an inhibitor of<br />

both COX-2 and 5-LOX. An inhibitor of p38 MAP kinase activation.<br />

Sodium Salicylate 567630 (NaSal; Salicylic Acid, Na)<br />

A cell-permeable, non-steroidal anti-inflammatory agent that inhibits COX-2<br />

and inducible NOS (iNOS) transcription independently of NF-kB activation.<br />

g $43<br />

0 g $76<br />

5 mg $ 03<br />

5 mg $ 03<br />

5 mg $ 03<br />

25 mg $73<br />

00 mg $ 07<br />

g $39<br />

0 mg $62<br />

5 mg $ 3<br />

0 mg $ 47<br />

500 mg $75<br />

25 mg $4<br />

5 mg $ 04<br />

5 mg $ 23<br />

5 g $33<br />

Technical Support<br />

Phone 800 628 8470<br />

E-mail calbiochem@emdbiosciences.com<br />

87


Lipid Signaling<br />

Cyclooxygenase (COX) <strong>Inhibitor</strong>s, continued<br />

Product Cat. No. Comments Size Price<br />

Sulindac 574100 {Aflodac; (Z)-5-Fluoro-2-methyl-1-[p-(methylsulfinyl)benzylidene]indene-3-acetic<br />

Acid; MK-231}<br />

A prodrug that is metabolized to a pharmacologically-active sulfide derivative<br />

that potently inhibits COX-2 activity. Inhibits chemical carcinogenesis in rodent<br />

models and causes regression of adenomas by an apoptotic mechanism.<br />

g $46<br />

Sulindac Sulfide 574102 {(Z)-5-Fluoro-2-methyl-1-[p-(methylthio)benzylidene]indene-3-acetic Acid}<br />

A selective inhibitor of COX- (ID = 500 nM) versus COX-2 (ID = 4 mM).<br />

50 50<br />

Reduces Ab load independently of COX inhibition.<br />

42<br />

5 mg $67<br />

Sulindac Sulfone 574105 {Exisulind; FGN-1; (Z)-5-Fluoro-2-methyl-1[p-(methylsulfonyl)benzylidene]indene-<br />

3-acetic Acid}<br />

A sulfone metabolite of Sulindac (Cat. No. 574 00) that has anti-cancer<br />

properties but lacks COX inhibitory activity. Also inhibits cell growth and<br />

induces apoptosis.<br />

5 mg $67<br />

Cyclooxygenase <strong>Inhibitor</strong> Set<br />

Provided as a 4 vial set. Each set contains 00 mg of Meloxicam (Cat. No.<br />

444800), and 5 mg each of NS-398 (Cat. No. 349254), SC-560 (Cat. No.<br />

5656 0), and Sulindac Sulfide (Cat. No. 574 02).<br />

Cat. No. 239783 1 set $309<br />

Fatty Acid Amide Hydrolase <strong>Inhibitor</strong>s<br />

Product Cat. No. Comments Size Price<br />

0 mg $63<br />

FAAH <strong>Inhibitor</strong> I 341248 4-Benzyloxyphenyl-n-butylcarbamate, Fatty Acid Amide Hydrolase <strong>Inhibitor</strong> I, URB532<br />

A cell-permeable carbamate compound that acts as a potent, selective, and<br />

irreversible inhibitor of fatty acid amide hydrolase (FAAH; IC 50 = 396 nM in<br />

brain membranes). Shown to block anandamide (Cat. No. 72 00) breakdown in<br />

cultured rat cortical neurons (IC 50 = 2 4 nM) and inhibit brain FAAH activity<br />

(ID 50 = 0.6 mg/kg) and modulate anxiety in rats.<br />

FAAH <strong>Inhibitor</strong> II 341249 3′-Carbamoyl-biphenyl-3-yl-cyclohexylcarbamate; Cyclohexylcarbamic acid-3′carbamoyl-biphenyl-3-yl<br />

Ester; URB597<br />

A cell-permeable carbamate compound that acts as a potent, selective, and<br />

irreversible inhibitor of fatty acid amide hydrolase (FAAH; IC = 4.6 nM in brain<br />

50<br />

membranes). Shown to block anandamide (Cat. No. 72 00) breakdown in rat<br />

cortical neurons (IC = 500 pM) and modulate anxiety in rats (IC = 0. 5 mg/kg).<br />

50 50<br />

Fatty Acid Synthase <strong>Inhibitor</strong>s<br />

5 mg $60<br />

Product Cat. No. Comments Size Price<br />

Arachidonylserotonin 181350 AA-5-HT; N-Arachidonyl-5-hydroxytryptamine<br />

A novel synthetic arachidonic acid derivative that potently inhibits anandamide<br />

hydrolysis in both cell-free preparations and intact cells without affecting<br />

anandamide uptake.<br />

5 mg $74<br />

Cerulenin, Cephalosporium 219557 (2R, 3S)-2, 3-epoxy-4-oxo-7, 10-trans, trandocecadienamide<br />

5 mg $77<br />

caerulens<br />

A fungal toxin that binds to and irreversibly inhibits fatty acid synthase activity.<br />

Fatty Acid Synthase<br />

341325 C75; 3-Carboxy-4-octyl-2-methylenebutyrolactone; trans-4-Carboxy-5-octyl-3-<br />

mg $70<br />

<strong>Inhibitor</strong>, C75<br />

methylenebutyrolactone<br />

A cell-permeable a-methylene-g-butyrolactone compound that potently<br />

inhibits FAS (fatty acid synthase) activity and stimulates CPT- (carnitine<br />

palmitoyltransferase- ), two key enzymes involved in the fatty acid biosynthesis.<br />

Acts centrally (reduces NPY expression) and peripherally (activates CPT- and<br />

fatty acid oxidation activity) to cause reduced food intake and body weight in<br />

mice. Promotes cell cycle arrest in human cancer cells culminating in apoptosis.<br />

5 mg $244<br />

88 Orders Phone 800 854 34 7<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Fax 800 776 0999<br />

Web www.emdbiosciences.com/calbiochem


HMG-CoA (3-Hydroxy-3-Methylglutaryl Coenzyme A)<br />

Reductase <strong>Inhibitor</strong>s<br />

HMG-CoA reductase catalyzes the 4-electron reduction<br />

of HMG-CoA to CoA and mevalonate, with oxidation of<br />

two molecules of NADPH. Regulation of the expression<br />

of hepatic HMG-CoA reductase is critical in maintaining<br />

normal cholesterol levels in serum and tissues.<br />

HMG-CoA reductase inhibitors (statins) are competitive<br />

inhibitors of this enzyme and have hypocholesterolemic<br />

properties. These inhibitors have close resemblance<br />

to HMG-CoA. During cholesterol biosynthesis they<br />

competitively inhibit the conversion of HMG-CoA to<br />

mevalonate, thereby reducing cholesterol biosynthesis<br />

in hepatic cells. This results in the enhanced synthesis of<br />

LDL-C receptors and increased uptake of LDL-C particles,<br />

which enhances cholesterol clearance from the plasma.<br />

Ultimately, LDL-C and total cholesterol concentrations<br />

are reduced.<br />

HMG-CoA (3-Hydroxy-3-Methylglutaryl Coenzyme A) Reductase <strong>Inhibitor</strong>s<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Lipid Signaling<br />

HMG-CoA reductase inhibitors differ in their<br />

pharmacokinetic properties and drug interaction<br />

profiles. For example, Lovastatin and Simvastatin are<br />

extensively metabolized by CYP3A4, an isozyme of the<br />

P450 system, and thus have the potential to interact<br />

with other drugs competing for or inhibiting this<br />

isoform. Both Lovastatin and Simvastatin are prodrugs<br />

in the lactone form and must be converted to active<br />

metabolites by the liver. On the other hand, pravastatin<br />

is not extensively metabolized by the P450 system. It<br />

is administered in its active hydroxyl acid form and is<br />

more hydrophilic and less protein-bound.<br />

Product Cat. No. Comments Size Price<br />

Cerulenin,<br />

Cephalosporium<br />

caerulens<br />

219557 An antifungal antibiotic that inhibits sterol and fatty acid biosynthesis. In fatty<br />

acid synthesis, reported to bind in equimolar ratio to b-keto-acyl-ACP synthase.<br />

In sterol synthesis, inhibits HMG-CoA synthetase activity.<br />

Fluvastatin, Sodium Salt 344095 {(±)-(3R´,5S´,6E)-7-[3-(4-Fluorophenyl)-1-isopropylindol-2-yl]-3,5-dihydroxy-6heptenoate,<br />

sodium}<br />

A synthetic HMG-CoA reductase inhibitor (IC 50 = 40– 00 nM for human liver<br />

microsomes) that acts as anti-hypercholesterolemic agent.<br />

Lovastatin 438185 (Mevinolin; MK-803)<br />

An anti-hypercholesterolemic agent that inhibits the activity of 3-hydroxy-<br />

3-methylglutaryl coenzyme A (HMG-CoA) reductase.<br />

Lovastatin, Sodium Salt 438186 Carboxylate form of Lovastatin (Cat. No. 438 85) that is active in whole cells and<br />

cell-free assays.<br />

Mevastatin 474700 (Compactin)<br />

An antibiotic that acts as a potent inhibitor of HMG-CoA reductase, thus<br />

suppressing Ras farnesylation.<br />

Mevastatin, Sodium Salt 474705 Carboxylate form of Mevastatin (Cat. No. 474700) that is active in whole cells<br />

and in cell-free assays.<br />

Pravastatin, Sodium Salt 524403 {(bR,dR,1S,2S,6S,8S,8aR)-1,2,6,7,8,8a-Hexahydro-b,d,6-trihydroxy-2methyl-8[(2S)-2-methyl-1-oxobutoxyl]-1-naphthaleneheptanoic<br />

Acid Na; 3b-<br />

Hydroxycompactin, Na}<br />

A water-soluble, competitive inhibitor of HMG-CoA reductase that potently<br />

blocks in vivo cholesterol synthesis (K i ~ nM).<br />

Simvastatin 567020 (MK-733)<br />

A lipophilic HMG-CoA reductase inhibitor that blocks Ras function through<br />

inhibition of farnesylation.<br />

Simvastatin,<br />

Sodium Salt<br />

More online... www.calbiochem.com/inhibitors/HMG<br />

567021 Carboxylate form of Simvastatin (Cat. No. 567020) that is active in whole cells<br />

and in cell-free preparations.<br />

5 mg $77<br />

25 mg $ 73<br />

25 mg $98<br />

5 mg $ 40<br />

50 mg $87<br />

5 mg $96<br />

25 mg $72<br />

50 mg $ 64<br />

5 mg $ 40<br />

Technical Support<br />

Phone 800 628 8470<br />

E-mail calbiochem@emdbiosciences.com<br />

89


Lipid Signaling<br />

Lipase <strong>Inhibitor</strong>s<br />

Product Cat. No. Comments Size Price<br />

N Lipase <strong>Inhibitor</strong>, THL 437701 Orlistat<br />

A cell-permeable, reactive b-lactone compound that acts as a selective,<br />

tight-binding irreversible inhibitor of gastric and pancreatic lipases with<br />

minimal activity against amylase, trypsin, chymotrypsin, and phospholipase A 2 .<br />

Covalently modifies a serine residue at the catalytic active site and partially<br />

N Monoacylglycerol Lipase<br />

<strong>Inhibitor</strong>, URB602<br />

inhibits the hydrolysis of triglycerides. Also potently inhibits the thioesterase<br />

app domain of fatty acid synthase (FAS; K ~ 00 nM) and induces apoptosis in<br />

i<br />

prostate carcinoma cells.<br />

475740 A cell-permeable compound that acts as a selective noncompetitive inhibitor of<br />

monoacylglycerol lipase (MGL; IC 50 = 28 mM for rat brain). Only minimally affects<br />

the activities of diacylglycerol lipase, FAAH and COX-2.<br />

Want to remove Lipids and Lipoproteins<br />

from your Plasma or Serum samples?<br />

PHM-L LIPOSORB Absorbent<br />

Designed to selectively remove lipoproteins from plasma or serum by<br />

batch procedure or column chromatography while antibody content and<br />

coagulation factors remain intact. Directly applicable with no further<br />

additions, affording improved serum or plasma stability. Has very low<br />

solubility in most solvents and has excellent chemical stability in acids<br />

and bases. PHM-L LIPOSORB Absorbent is resistant to enzymatic<br />

degradation and to activation of coagulation factors, is heat stable<br />

and can be sterilized by autoclaving ( 20˚C) without altering its binding<br />

capacity. Has high capacity with no volume limitation and is simple<br />

to use without expensive apparatus. Offers significant technical<br />

advantages over phenylagarose. One gram of absorbent is sufficient to<br />

remove lipids from 25 ml of serum or ascites.<br />

Cat. No. 524371 1 g<br />

10 g<br />

$45<br />

$285<br />

50 mg $93<br />

0 mg $98<br />

90 Orders Phone 800 854 34 7<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Fax 800 776 0999<br />

Web www.emdbiosciences.com/calbiochem


Lipoxygenase (LOX) <strong>Inhibitor</strong>s<br />

Lipoxygenases (LOX) belong to a heterogenous family<br />

of lipid-peroxidizing enzymes and are involved in<br />

the biosynthesis of mediators of inflammation. Based<br />

on their regiospecificity during interaction with<br />

substrates, LOX have been classified as 5-, 8-, 12-, and<br />

15-LOX. They insert oxygen at carbon 5, 8, 12 or 15<br />

of arachidonic acid, forming 5S-, 8S-, 12S-, or 15Shydroperoxyeicosatetraenoic<br />

acid (5-, 8-, 12-, or 15-<br />

HPETE). HPETEs can be further reduced by glutathione<br />

peroxidase to the hydroxy forms (5-, 8-, 12-, 15-HETE),<br />

respectively. 5-LOX is a dioxygenase that catalyzes the<br />

incorporation of molecular oxygen into arachidonic acid<br />

(oxygenase activity), producing HPETE and then forms<br />

the unstable epoxide LTA4 (LTA4 synthase activity).<br />

This is followed by the insertion of molecular oxygen<br />

at position C5, converting LTA4 to either 5(S)-hydroxy-<br />

6-trans-8, 11,14-cis-eicosatetranoic acid (5-HETE) or<br />

leukotrienes. Hydrolytic attack of LTA4 by leukotriene<br />

A4 hydrolase yields LTB4, a potent neutrophil<br />

chemoattractant and stimulator of leukocyte adhesion<br />

to endothelial cells. LTA4 can be conjugated with<br />

glutathione to form LTC4 by the action of LTC4 synthase.<br />

5-LOX pathway has been implicated in the development<br />

and progression of human cancers. Hence, 5-LOX<br />

inhibitors have been sought for their chemopreventive<br />

effects. Inhibition of 5-LOX activity is shown to block<br />

prostate cancer cell proliferation.<br />

12-LOX exists in three distinct forms: the leukocytetype,<br />

the platelet-type, and the epidermal form. The<br />

Lipoxygenase (LOX) <strong>Inhibitor</strong>s<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Lipid Signaling<br />

platelet-type 12-LOX converts arachidonic acid to<br />

12-(S)-HETE. The leukocyte-type 12-LOX metabolizes<br />

arachidonic acid or linoleic acid to either 12(S)-<br />

HETE or 15(S)-HETE. The epidermal form of 12-LOX<br />

converts arachidonic acid to 12-HETE and 15-HETE.<br />

12-LOX has been shown to be involved in both cancer<br />

cell proliferation and survival. Inhibition of 12-LOX<br />

blocks cell proliferation and induces apoptosis in<br />

carcinosarcoma cells. 8-LOX is expressed in the skin<br />

after irritation or treatment with tumor promoters.<br />

Compared with other LOX enzymes, 8-LOX has received<br />

little attention for its role in carcinogenesis and cancer<br />

growth. 15-LOX exists as two isozymes, 15-LOX-1 and<br />

15-LOX-2. It converts arachidonic acid to 15-HPETE<br />

which is then reduced by glutathione peroxidase to 15-<br />

HETE. The preferred substrate for 15-LOX-1 and 15-LOX-<br />

2 are linoleic acid and arachidonic acid, respectively. The<br />

15- LOX-1 product, 13-S-HODE, is reported to enhance<br />

cell proliferation and potentiate the mitogenic response<br />

to EGF in different cell types. 15-LOX has also been<br />

implicated in the pathogenesis of altherosclerosis.<br />

References:<br />

Kuhn, H. 2005. Expert Rev. Cardiovas. Ther. 3, 099.<br />

Zhao, L., and Funk, C. D. 2004. Trends Cardiovasc. Med. 14, 9 .<br />

Funk, C.D. 200 . Science 294, 87 .<br />

Shureiqi, I., and Lippman, S.M. 200 . Cancer Res. 61, 6307.<br />

Kuhn, H., et al. 999. Adv. Exp. Med. Biol. 447, 5.<br />

Yamamoto, S., et al. 999. Adv. Exp. Med. Biol. 447, 37.<br />

Anderson, K.M., et al. 996. Anticancer Res. 16, 2589.<br />

Funk. C.D., et al. 996. J. Biol. Chem. 271, 23338.<br />

Product Cat. No. Comments Size Price<br />

N Acetyl- -keto-b-<br />

Boswellic Acid,<br />

Boswellia serrata<br />

110123 (3-O-Acetyl-11-keto-b-Boswellic Acid; AKBA; AKbBA)<br />

A cell-permeable, nonredox, noncompetitive inhibitor of 5-lipoxygenase<br />

(IC 50 = .5 mM in rat PMNLs), and calf thymus topoisomerase I ( ≥ 0 mM).<br />

Arachidonylserotonin 181350 AA-5-HT, N-Arachidonyl-5-hydroxytryptamine<br />

Irreversibly inactivates soybean 5-lipoxygenase (K i ~20 mM).<br />

More online... www.calbiochem.com/inhibitors/LOX<br />

Baicalein 196322 (5,6,7-Trihydroxyflavone)<br />

Flavone that inhibits the activity of 2-LOX (IC 50 = 20 nM) and reverse<br />

transcriptase. Reduces leukotriene biosynthesis and the release of lysosomal<br />

enzymes.<br />

Caffeic Acid 205546 (3,4-Dihydroxycinnamic Acid)<br />

An inhibitor of neutrophil elastase (IC 50 = 93 mM). Also acts as a selective,<br />

non-competitive inhibitor of 5-lipoxygenase (ID 50 = 3.7 mM), glutathione<br />

S-transferases, and xanthine oxidase.<br />

Curcumin, Curcuma longa L. 239802 [1,7-Bis(4-hydroxy-3-methoxyphenyl)-1,6-heptadiene-3,5-dione]<br />

<strong>Inhibitor</strong> of 5-LOX (IC 50 = 8 mM) and COX (IC 50 = 52 mM). Exhibits antitumor<br />

and anti-inflammatory properties.<br />

5 mg $ 68<br />

5 mg $74<br />

0 mg $77<br />

500 mg $48<br />

00 mg $35<br />

Technical Support<br />

Phone 800 628 8470<br />

E-mail calbiochem@emdbiosciences.com<br />

9


Lipid Signaling<br />

Lipoxygenase (LOX) <strong>Inhibitor</strong>s, continued<br />

Product Cat. No. Comments Size Price<br />

Eicosapentaenoic Acid 324875 (C20:5 w-3; 5,8,11,14,17-Eicosapentaenoic Acid; EPA)<br />

A fatty acid isolated from microscopic algae that acts as an antihyperlipoproteinenic<br />

agent. Inhibits 5-LOX and reduces thromboxane A2<br />

production.<br />

ETYA 434741 (5,8,11,14-Eicosatetraynoic Acid)<br />

A cell-permeable inhibitor of COX (ID 50 = 8 mM), 5-LOX (ID 50 = 0 mM), 2-LOX<br />

(ID 50 = 300 nM), and 5-LOX (ID 50 = 200 nM) in whole cells. Also acts as a<br />

modulator of Ca 2+ entry into cells.<br />

Hinokitiol 377230 (4-Isopropyltropolone; b-Thujaplicin)<br />

A cell-permeable metal ion chelator that also acts as a reversible inhibitor of<br />

2-LOX in platelets (IC 50 = 00 nM).<br />

Ketoconazole 420600 {cis-1-Acetyl-4-[4-[[2-(2,4-dichlorophenyl)-2-(1H-imidazol-1-ylmethyl)-1,3dioxolan-4-yl]methoxy]phenyl]piperazine;<br />

R-41400}<br />

An antifungal agent that acts as an inhibitor of 5-LOX (IC = 26 mM) and<br />

50<br />

thromboxane synthase.<br />

MK-886 475889 {3-[1-(p-Chlorobenzyl)-5-(isopropyl)-3-t-butylthioindol-2-yl]-2,2dimethylpropanoic<br />

Acid, Na}<br />

A cell-permeable, potent and specific inhibitor of leukotriene biosynthesis<br />

(IC = 02 nM). Prevents the activation of 5-LOX by binding to 5-LOX-activating<br />

50<br />

protein (FLAP); however, it does not affect 5-LOX activity in cell-free systems.<br />

NDGA, Larrea divaricata 479975 (Nordihydroguaiaretic Acid)<br />

An antioxidant and a selective LOX inhibitor (IC = 200 nM, 30 mM, and 30 mM<br />

50<br />

for 5-LOX, 2-LOX, and 5-LOX, respectively) over COX (IC = 00 mM).<br />

50<br />

Ro 06-9920 557550 A cell-permeable, irreversible inhibitor of IkBaee ubiquitination (IC = 2.3 mM)<br />

50<br />

that also inhibits the activity of 5-lipoxygenase (89% at 0 mM).<br />

SKF-86002 567305 {6-(4-Fluorophenyl)-2,3-dihydro-5-(4-pyridyl)imidazo[2,1-b]thiazole}<br />

A cytokine-suppressive anti-inflammatory drug that also acts as an inhibitor of<br />

both COX and 5-LOX.<br />

25 mg $83<br />

20 mg $203<br />

50 mg $43<br />

50 mg $75<br />

5 mg $90<br />

250 mg $46<br />

92 Orders Phone 800 854 34 7<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Fax 800 776 0999<br />

Web www.emdbiosciences.com/calbiochem<br />

mg<br />

5 mg<br />

$72<br />

$25<br />

5 mg $ 23


Phospholipase <strong>Inhibitor</strong>s<br />

Several signal transduction processes in cells utilize<br />

lipid-derived second messengers. These molecules are<br />

generated by the action of phospholipases on cellular<br />

lipids. Phospholipase A 2 (PLA 2 ) hydrolyzes the acyl<br />

group from the sn-2 position of glycerophospholipids.<br />

Two major types of PLA 2 are found in cells: the cytosolic<br />

form (cPLA 2 ) and the secretory form (sPLA 2 ). cPLA 2 , an<br />

85 kDa enzyme, preferentially hydrolyzes phospholipids<br />

containing arachidonate at the sn-2 position and<br />

provides free arachidonic acid for the synthesis of<br />

eicosanoids. cPLA 2 is found in a variety of cells where<br />

it acts as a receptor-regulated enzyme that can mediate<br />

agonist-induced arachidonic acid release. It is activated<br />

by low levels of Ca 2+ . sPLA 2 , following its release from<br />

cells, plays an important role in inflammation and in<br />

antimicrobial defense. However, excessive activity of<br />

sPLA 2 has been shown to result in tissue damage and is<br />

linked to organ failure associated with critical illness.<br />

Phospholipase <strong>Inhibitor</strong>s<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Lipid Signaling<br />

PLA 2 inhibitors are considered as desirable candidates<br />

for control and management of diseases related to<br />

eicosanoid production, such as allergy, inflammation,<br />

thrombosis, airway secretion, and cell proliferation.<br />

Phospholipase C (PLC) is another important member<br />

of the family that controls the production of inositol-<br />

1,4,5- trisphosphate (IP 3 ). IP 3 is involved in cytosolic<br />

Ca 2+ release and diacylglycerol (DAG) production, both of<br />

which activate protein kinase C. Phospholipase D (PLD)<br />

catalyzes the hydrolysis of phosphatidylcholine to form<br />

phosphatidic acid (PA) and released choline headgroup.<br />

The PA can itself act as a signal molecule by activating a<br />

PA-activated kinase, or can be hydrolyzed to form DAG<br />

by the action of PA phosphohydrolase.<br />

Product Cat. No. Comments Size Price<br />

AACOCF 3 100109 (Arachidonyltrifluoromethyl Ketone)<br />

A cell-permeable trifluoromethyl ketone analog of arachidonic acid. Potent<br />

and selective slow-binding inhibitor of human cytosolic (85 kDa) PLA 2 . Causes<br />

a significant reduction in thromboxane B 2 production in thrombin-stimulated<br />

platelets.<br />

ACA 104550 [N-(p-Amylcinnamoyl)anthranilic Acid]<br />

Inhibits epinephrine-stimulated thromboxane production (86% at 3.5 mM) via<br />

inhibition of PLA 2 in human platelets. Possesses moderate leukotriene antagonist<br />

activity.<br />

Aristolochic Acid 182300 A : mixture of aristolochic acids I and II. Inhibits PLA 2 from various snake<br />

venoms as well as human platelet and synovial fluid PLA 2 . Also inhibits<br />

ionophore-stimulated PLA 2 activity (IC 50 = 40 mM) and Ca 2+ -dependent<br />

arachidonic acid released in human neutrophils. Exhibits greater inhibitory<br />

activity towards group II PLA 2 versus group I PLA 2 .<br />

D609, Potassium Salt 251400 (Tricyclodecan-9-yl-xanthogenate, K)<br />

Selective inhibitor of phosphatidylcholine-specific phospholipase C (Bacillus<br />

cereus, K i = 5– 0 mM). Does not inhibit (up to 50 mM) phosphatidylinositolspecific<br />

phospholipase C, PLA 2 , and PLD. Also inhibits the activity of<br />

sphingomyelinase.<br />

D609 Prodrug 251401 (S-Methyleneoxybutyryl D609)<br />

A cell-permeable prodrug form of D609 (Cat. No. 25 400) that displays reduced<br />

cytotoxicity towards normal cells, but enhanced potency in inducing apoptosis in<br />

tumor cells (LD 50 = 56.6 mM for U937 cells).<br />

ET- 8-OCH 3 341207 (Edelfosine; 1-O-Octadecyl-2-O-methyl-rac-glycero-3-phosphorylcholine)<br />

A selective inhibitor of phosphatidylinositol-specific PLC (IC 50 = 5 mM) but has<br />

no significant effect on phosphatidylcholine-specific PLC or PLD.<br />

Isotetrandrine 419650 A biscoclaurine alkaloid that inhibits G-protein activation of phospholipase A 2<br />

but not phospholipase C or phospholipase D.<br />

Methyl Arachidonyl<br />

Fluorophosphonate<br />

More online... www.calbiochem.com/inhibitors/plipase<br />

454565 (MAFP)<br />

A selective, active site-directed, irreversible inhibitor of both calcium-dependent<br />

and calcium-independent cytosolic (85 kDa) PLA 2 , but not secretory PLA 2 .<br />

0 mg $87<br />

25 mg $84<br />

50 mg $50<br />

5 mg $ 07<br />

5 mg $ 63<br />

5 mg $80<br />

mg $77<br />

mg $77<br />

Technical Support<br />

Phone 800 628 8470<br />

E-mail calbiochem@emdbiosciences.com<br />

93


Lipid Signaling<br />

Phospholipase <strong>Inhibitor</strong>s, continued<br />

Product Cat. No. Comments Size Price<br />

MJ33 475865 [1-Hexadecyl-3-(trifluoroethyl)-sn-glycero-2-phosphomethanol, Li]<br />

A novel, active-site directed, specific, competitive, and reversible inhibitor<br />

of PLA 2 . Shows high specificity for type I (pancreatic) and bee venom PLA 2 ,<br />

but has relatively poor affinity for the type II human synovial PLA 2 . MJ33 has<br />

shown inhibitory activity against a low pH calcium-independent enzyme, as<br />

well as against the PLA 2 activity, which is responsible for permeability barrier<br />

homeostasis or esophagitis.<br />

Neomycin Sulfate 4801 An inhibitor of inositol phospholipid turnover. A non-specific PLC inhibitor. Also<br />

inhibits phophatidylcholine-PLD activity (IC 50 = 65 mM).<br />

Neomycin Sulfate,<br />

g-Irradiated, Tissue Culture<br />

Grade<br />

480100 An inhibitor of inositol phospholipid turnover. A non-specific PLC inhibitor.<br />

Also inhibits phophatidylcholine-PLD activity (IC 50 = 65 mM).<br />

PACOCF 3 506274 (Palmitoyl Trifluoromethyl Ketone)<br />

A novel Ca 2+ -independent PLA 2 inhibitor (IC 50 = 3.8 mM). May also inhibit<br />

Ca 2+ -dependent PLA 2 at higher concentrations (IC 50 = 45 mM).<br />

cPLA2a <strong>Inhibitor</strong> 525143 {N-{(2S,4R)-4-(Biphenyl-2-ylmethyl-isobutyl-amino)-1-[2-(2,4-difluorobenzoyl)benzoyl]-pyrrolidin-2-ylmethyl}-3-[4-(2,4-dioxothiazolidin-5-ylidenemethyl)phenyl]acrylamide,<br />

HCl}<br />

A cell-permeable, highly specific, potent inhibitor of cytosolic PLA2a<br />

(IC 50 = .8 nM). Exhibits ~230-fold greater potency in enzyme assays and<br />

~3900-fold greater potency in cellular assays compared to AACOCF 3<br />

(Cat. No. 00 09).<br />

sPLA 2 -IIA <strong>Inhibitor</strong> I 525145 [c(2NapA)LS(2NapA)R, TFA]<br />

A highly hydrophobic cyclic pentapeptide that selectively binds and acts as a<br />

potent inhibitor of human type IIA secreted PLA 2 (IC 50 = 2.8 mM). Reported<br />

to effectively block sPLA 2 -IIA-induced PGE 2 production at 00 nM in human<br />

rheumatoid synoviocytes and is non-toxic at doses up to 0 mM. Does not affect<br />

the activities of porcine sPLA 2 -IB, Naja naja sPLA 2 -IB, or Crotalus durissus<br />

sPLA 2 -IIA even at 0 mM.<br />

Quercetin, Dihydrate 551600 (3,3´,4´,5,7-Pentahydroxyflavone)<br />

An inhibitor of PI 3-kinase (IC 50 = 3.8 mM) and phospholipase A2 (IC 50 = 2 mM).<br />

Also inhibits mitochondrial ATPase, phosphodiesterases, and PKC.<br />

Quinacrine, Dihydrochloride 551850 (Mepacrine)<br />

A phospholipase A 2 inhibitor that also inhibits the activity of monoamine<br />

oxidase.<br />

Spermine,<br />

Tetrahydrochloride<br />

D-erythro-Sphingosine,<br />

Dihydro-<br />

5677 Polyamine that plays an important role in the regulation of cellular proliferation<br />

and differentiation. Acts as an inhibitor of PLC-a and an activator of PLC-d.<br />

300230 (Sphinganine)<br />

Biosynthetic precursor of sphingosine. Inhibits PKC in Chinese hamster ovary<br />

cells (IC 50 = 2.9 mM).<br />

ST638 567790 [a-Cyano-(3-ethoxy-4-hydroxy-5-phenylthiomethyl)cinnamide]<br />

A protein tyrosine kinase inhibitor (IC 50 = 370 nM) that also inhibits PLD activity<br />

in human neutrophils.<br />

U-73 22 662035 {1-[6-((17b-3-Methoxyestra-1,3,5(10)-trien-17-yl)amino)hexyl]-1H-pyrrole-2,5-dione}<br />

Inhibits agonist-induced PLC activation (IC 50 = .0–2. mM) in human platelets<br />

and neutrophils.<br />

U-73343 662041 {1-[6-((17b-3-Methoxyestra-1,3,5(10)-trien-17-yl)amino)hexyl]-2,5-pyrrolidinedione}<br />

Analog of U-73 22 (Cat. No. 662035) that acts as a very weak inhibitor of PLC.<br />

Suitable as a negative control.<br />

5 mg $89<br />

25 g $32<br />

20 ml $55<br />

5 mg $43<br />

500 mg $ 73<br />

mg $ 03<br />

00 mg $33<br />

00 mg $34<br />

5 g $ 45<br />

0 mg $79<br />

5 mg $ 28<br />

5 mg $95<br />

5 mg $95<br />

94 Orders Phone 800 854 34 7<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

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Sphingomyelinase <strong>Inhibitor</strong>s<br />

Ceramide, a sphingosine-based lipid-signaling molecule,<br />

has gained serious attention as an important signaling<br />

molecule in cell cycle, cell differentiation, apoptosis, and<br />

immune response. Ceramide is generated either through<br />

de novo synthesis mediated by ceramide synthase or<br />

through hydrolysis of membrane sphingomyelin by<br />

an acid or neutral sphingomyelinase. Acid and neutral<br />

sphingomelinases differ in their ion dependence, pH<br />

optima, and cellular localization. Recent evidence<br />

suggests that the activation of a non-specific lipid<br />

scramblase during apoptosis induces the flipping of<br />

sphingomyelin from the cell surface to the cytoplasm<br />

side of the plasma membrane where it is cleaved by<br />

neutral sphingomyelinase to generate ceramide. The<br />

production of ceramide induces blebbing of the plasma<br />

membrane and aids in rapid engulfment by phagocytes.<br />

Neutral sphingomyelinase-released ceramide has also<br />

been shown to be essential for capping of L-selectin in<br />

lymphocytes.<br />

Sphingomyelinase <strong>Inhibitor</strong>s<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Lipid Signaling<br />

Some evidence exists indicating that acid<br />

sphingomyelinase deficient cells have defects in<br />

apoptotic signaling pathways. Sphingomyelin is<br />

usually rapidly broken down in the late endosomes and<br />

lysosomes. Hence, in acid sphingomyelinase deficiency,<br />

sphingomyelin may be kinetically trapped in lysosomes<br />

and disrupt endocytic trafficking of raft-associated<br />

cell surface signaling molecules. Defects in acid<br />

sphingomyelinase have also been linked to lysosomal<br />

storage disease known as Niemann-Pick disease, which<br />

results in progressive enlargement of liver and spleen.<br />

References:<br />

Cremesti, A.E., et al. 2002. FEBS Lett. 531, 47.<br />

Sillence, D.J. 200 . BMC Cell Biology 2, 24.<br />

Zhang, Y., et al. 200 . J. Biol. Chem. 276, 775.<br />

Tomiuk, S., et al. 998. Proc. Natl. Acad. Sci. USA 95, 3638.<br />

Product Cat. No. Comments Size Price<br />

Chlorpromazine,<br />

Hydrochloride<br />

215921 {2-Chloro-10-[3´-(dimethylamino)propyl]phenothiazine, HCl}<br />

An inhibitor of calmodulin-dependent phosphodiesterase I (IC 50 = 7 mM) that<br />

acts as an inhibitor of lysosomal sphingomyelinase.<br />

3,4-Dichloroisocoumarin 287815 A serine protease inhibitor that blocks daunorubicin-induced neutral<br />

sphingomyelinase activation.<br />

Fumonisin B , Fusarium<br />

moniliforme<br />

344850 (FB 1 )<br />

A cell-permeable mycotoxin that inhibits sphingolipid biosynthesis in rat kidney<br />

and in liver microsomes by inhibition of sphingosine N-acyltransferase (ceramide<br />

synthase; IC 50 = 00 nM). Preferentially inhibits sphingomyelin biosynthesis in<br />

neuronal cells. Exhibits carcinogenic properties.<br />

Gentamycin Sulfate 345814 A broad-spectrum antibiotic that reduces sphingomyelinase activity in<br />

fibroblasts.<br />

Manumycin A, Streptomyces<br />

parvulus<br />

444170 A potent and selective inhibitor of farnesyl transferase (IC 50 = 5 mM) that acts as<br />

an irreversible inhibitor of neutral sphingomyelinase.<br />

N-SMase <strong>Inhibitor</strong>, GW4869 567715 (GW554869A; GW69A; Sphingomyelinase, Neutral, <strong>Inhibitor</strong> GW4869)<br />

A cell-permeable, symmetrical dihydroimidazolo-amide that acts as a potent,<br />

specific, and non-competitive inhibitor of neutral sphingomyelinase (N-SMase)<br />

(IC 50 = mM, rat brain N-SMase).<br />

N a -Tosyl-Phe Chloromethyl<br />

Ketone<br />

Squalene-2,3-oxide Cyclase <strong>Inhibitor</strong><br />

616387 (TPCK)<br />

A serine protease inhibitor that blocks daunorubicin-induced neutral<br />

sphingomyelinase activator and sphingomyelin hydrolysis.<br />

More online... www.calbiochem.com/inhibitors/sphingomyelinase<br />

500 mg $57<br />

0 mg $ 30<br />

250 mg<br />

g<br />

mg $69<br />

g $58<br />

mg $77<br />

mg $ 46<br />

Product Cat. No. Comments Size Price<br />

AMO 6 8 1712 Anticholesterolemic agent that can be used as an inhibitor of squalene-2,3-oxide<br />

cyclase to study the action of squalene epoxidase in the microsomal cholesterol<br />

biosynthetic pathway.<br />

$39<br />

$ 0<br />

250 g $ 29<br />

Technical Support<br />

Phone 800 628 8470<br />

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95


Neurobiology/Neurodegeneration<br />

Neurobiology/Neurodegeneration<br />

Amyloidogenesis <strong>Inhibitor</strong>s<br />

Ab (b-amyloid) peptide is a major component of neuritic<br />

plaques and cerebrovascular amyloid deposits in the<br />

brains of patients with Alzheimer's disease (AD). The<br />

cellular origin of amyloid precursor protein (APP) that<br />

gives rise to Ab is now well understood. Morphological<br />

evidence suggests that APP-immunoreactive neurites,<br />

often capped by Ab deposits, are one of the major sources<br />

of parenchymal amyloid. However, other cells, including<br />

Amyloidogenesis <strong>Inhibitor</strong>s<br />

astroglia, microglia, and vascular cells, may contribute<br />

to the formation of Ab. A long-standing hypothesis has<br />

been that Ab deposits are neurotoxic and are causative<br />

factors in the development and progression of AD. Hence,<br />

the development of inhibitors of Ab fibrillogenesis has<br />

become an important area of research.<br />

More online... www.calbiochem.com/inhibitors/amyloidogenesis<br />

Product Cat. No. Comments Size Price<br />

Ab 40 Fibrillogenesis <strong>Inhibitor</strong> 171581 [Ab16-20m; Ac-K(Me)LV(Me)FF-NH 2 ; Amyloid b 40 Fibrillogenesis <strong>Inhibitor</strong>]<br />

Cell-permeable pentapeptide based on the core domain of Ab, which<br />

contains N-methyl amino acids in alternate positions. Displays stability<br />

towards denaturation and is resistant to chymotrypsin.<br />

Ab 42 Fibrillogenesis <strong>Inhibitor</strong> I 171586 (Amyloid b 42 Fibrillogenesis <strong>Inhibitor</strong> I; iAb5; LPFFD)<br />

Design is based on the central hydrophobic region in the N-terminal<br />

domain of Ab. Binds to the monomeric/dimeric Ab peptides with high<br />

affinity (K d ~70 nM).<br />

Ab 42 Fibrillogenesis <strong>Inhibitor</strong> II 171587 (Amyloid b 42 Fibrillogenesis <strong>Inhibitor</strong> II; RVVIA-NH 2 )<br />

Contains the C-terminal sequence of Ab 42 with Gly 38 to Arg substitution,<br />

which results in improved solubility and potency.<br />

Ab 42 Fibrillogenesis <strong>Inhibitor</strong> III 171588 (Amyloid b 42 Fibrillogenesis <strong>Inhibitor</strong> III; Ac-LPFFD-NH 2 ; iAb5p)<br />

A modified analog of Ab 42 Fibrillogenesis <strong>Inhibitor</strong> I (Cat. No. 7 586).<br />

Can cross the blood brain barrier. Exhibits greater stability against<br />

proteolytic degradation.<br />

Ab 42 Fibrillogenesis <strong>Inhibitor</strong> IV 171589 [Ac-LP-(NMe)-FFD-NH 2 ; Amyloid b 42 Fibrillogenesis <strong>Inhibitor</strong> IV; iAb5p-A1]<br />

A modified analog of the end protected Ab 42 Fibrillogenesis <strong>Inhibitor</strong> III<br />

(Cat. No. 7 588) that acts as a b-sheet breaker. Has increased<br />

in vivo metabolic stability (t ½ >24 hours in human plasma and in<br />

rat brain homogenate).<br />

Clioquinol 233165 (5-Chloro-7-iodo-8-hydroxyquinoline)<br />

A metal ion chelator that crosses the blood-brain barrier and acts as a<br />

neurotoxic antibiotic. Reported to dissolve senile plaques and reduce<br />

amyloid’s ability to clump together, apparently by trapping Cu 2+ and<br />

Zn 2+ that reduces the build-up of these deposits.<br />

Diclofenac Sodium 287840 A cell-permeable, non-selective cyclooxygenase inhibitor (IC 50 =<br />

60 nM and 200 nM for ovine COX- and COX-2 respectively) and potent<br />

non-steroidal anti-inflammatory drug with analgesic activity. Strongly<br />

inhibits insoluble transthyretin (TTR) amyloid fibril formation. Also<br />

inhibits liver phenol sulfotransferase activity (IC 50 = 9.5 mM).<br />

Flurbiprofen 344079 A non-steroidal anti-inflammatory agent that acts as a potent<br />

cyclooxygenase inhibitor (IC 50 = 5 nM for LPS-induced COX in human<br />

peripheral blood cells). Reduces Ab loads and Congo Red staining in<br />

APP+PS transgenic mice.<br />

Genistein 345834 An isoflavone that acts as a potent inhibitor of transthyretin (TTR)<br />

tetramer dissociation and amyloidogenesis. Binds to TTR with negative<br />

cooperativity (K d = 40 nM; K d2 = .4 mM). Prevents acid-mediated fibril<br />

aggregation.<br />

96 Orders Phone 800 854 34 7<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Fax 800 776 0999<br />

Web www.emdbiosciences.com/calbiochem<br />

mg<br />

5 mg<br />

$77<br />

$289<br />

5 mg $ 35<br />

5 mg $ 35<br />

5 mg $ 35<br />

5 mg $20<br />

g $45<br />

g $28<br />

00 mg $38<br />

20 mg<br />

50 mg<br />

$73<br />

$ 46


Amyloidogenesis <strong>Inhibitor</strong>s<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Neurobiology/Neurodegeneration<br />

Product Cat. No. Comments Size Price<br />

Niflumic Acid 481987 A phenolic product with antifungal, antitumor, and antioxidative<br />

properties. A specific inhibitor of COX- (ED = 5 mM). Also inhibits<br />

50<br />

the hydroxyperoxidase activity of COX- (ED = 3.7 mM). Strongly<br />

50<br />

inhibits insoluble transthyretin (TTR) amyloid formation.<br />

g $39<br />

Resveratrol 554325 A phenolic product with antifungal, antitumor, and antioxidative<br />

properties. A specific inhibitor of COX- (ED = 5 mM). Also inhibits<br />

50<br />

the hydroxyperoxidase activity of COX- (ED = 3.7 mM). Promotes<br />

50<br />

intracellular degradation of Ab peptide via a proteasome-dependent<br />

process.<br />

25 mg $4<br />

Technical Support<br />

Phone 800 628 8470<br />

E-mail calbiochem@emdbiosciences.com<br />

97


Neurobiology/Neurodegeneration<br />

Cholinesterase <strong>Inhibitor</strong>s<br />

A large number of autonomic neurons are cholinergic in<br />

nature. Cholinergic terminals contain a large number of<br />

small acetylcholine (ACh)-containing, membrane-bound<br />

vesicles concentrated near the synaptic end. Following<br />

their release from the pre-synaptic end, ACh<br />

molecules activate cholinoreceptors<br />

on the post-synaptic membrane.<br />

Acetylcholinesterase<br />

(AChE) is a tetrameric<br />

protein that catalyzes<br />

the hydrolysis of<br />

acetylcholine. The<br />

active site of AChE<br />

includes a serine<br />

hydroxyl group<br />

that is rendered<br />

more nucleophilic<br />

through the<br />

proton-acceptor<br />

action of a nearby<br />

histidine residue. The<br />

serine residue exerts<br />

a nucleophilic attack<br />

on the carbonyl carbon<br />

Cholinesterase <strong>Inhibitor</strong>s<br />

Cardiovascular<br />

Vasodilation<br />

Reduced Cardiac Rate<br />

Reduced Force of Contraction<br />

Gastro-Intestinal<br />

Increased Peristalsis<br />

Enhanced Secretory Activity<br />

Sphincter Relaxation<br />

Glandular Secretions<br />

Increased Pancreatic Secretions<br />

Enhanced Salivary K + and Water Secretion<br />

Increased Adrenal Medullary Secretions<br />

Increased Lacrimal Secretions<br />

Urinary Bladder<br />

of acetylcholine. AChE inhibitors may act by either<br />

competitively blocking hydrolysis without reacting with<br />

the enzyme, or may acylate the serine hydroxyl group,<br />

forming a carbamyl ester, which is more stable than<br />

acetate and is less likely to abandon the<br />

active site of the enzyme. AChE<br />

inhibitors, which increase<br />

CHOLINE ESTERS<br />

MUSCARINIC<br />

EFFECTS<br />

Increased Uretural Peristalsis<br />

Reduced Bladder Capacity<br />

NICOTINIC<br />

EFFECTS<br />

CNS Effects<br />

Stimulation of CNS<br />

Excitation of Respiration<br />

Automomic Ganglia<br />

Excitation of Sympathetic<br />

and Parasympathetic Ganglia<br />

Muscle Contraction<br />

Neuromuscular<br />

the availability of<br />

acetylcholine in central<br />

synapses, as well as<br />

muscarinic agonists,<br />

have become the<br />

main approach<br />

to symptomatic<br />

treatment of patients<br />

with Alzheimer's<br />

disease (AD). These<br />

agents do not reverse the<br />

progression of the disease,<br />

but they do contribute to<br />

modest improvements in memory,<br />

thinking and reasoning skills in AD patients.<br />

Product Cat. No. Comments Size Price<br />

Diisopropylfluorophosphate 30967 (DFP)<br />

98 Orders Phone 800 854 34 7<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Fax 800 776 0999<br />

Web www.emdbiosciences.com/calbiochem<br />

Junctions<br />

A potent irreversible inhibitor of serine proteases. Also irreversibly<br />

inactivates acetylcholinesterase.<br />

Galanthamine, Hydrobromide 345670 (Nivalin, HBr)<br />

A cholinesterase inhibitor and antimyasthenic agent that can partially<br />

reverse the effects of scopolamine-induced amnesia in rats.<br />

(±)-Huperzine A 385885 A synthetic, optically inactive, enantiomeric mixture that inhibits AChE<br />

activity and acts as a cholinomimetic.<br />

(–)-Huperzine A, Huperzia serrata 385886 Potently inhibits AChE (K i = 8 nM) in a mixed linear competitive manner.<br />

A more potent enantiomer with three-fold activity compared to the<br />

racemic mixture, (±)-Huperzine (Cat. No. 385885).<br />

Monoamine Oxidase <strong>Inhibitor</strong><br />

More online... www.calbiochem.com/inhibitors/cholinesterase<br />

g $266<br />

20 mg $75<br />

mg $62<br />

250 mg $32<br />

Product Cat. No. Comments Size Price<br />

Quinacrine, Dihydrochloride 551850 A non-specific phospholipase A 2 (PLA 2 ) inhibitor that inhibits<br />

monoamine oxidase activity. Also supresses glibenclamide-sensitve<br />

K + currents (IC 50 = 4.4 mM)..<br />

00 mg $34


Secretase <strong>Inhibitor</strong>s<br />

Deposition of Ab is an early event in the pathogenesis of<br />

Alzheimer's disease (AD). The b-amyloid gene, located<br />

on chromosome 21, encodes a transmembrane amyloid<br />

precursor protein (APP), which gives rise to Ab. In<br />

normal healthy individuals, Ab peptides are present<br />

only in small quantities as soluble monomers that<br />

circulate in the cerebrospinal fluid and blood. However,<br />

in AD patients, the level of Ab peptides is significantly<br />

increased and they begin to accumulate as insoluble,<br />

fibrillar plaques.<br />

Processing of APP in vivo occurs by two major pathways.<br />

Cleavage of APP at the N-terminus of the Ab region<br />

by b-secretase and at the C-terminus by g-secretases<br />

represents the amyloidogenic pathway for processing of<br />

APP. b-secretase cleaves APP between residues Met 671<br />

and Asp 672 and yields Ab peptide plus the C99 fragment.<br />

Following b-secretase cleavage, a second cleavage occurs<br />

at the C-terminus of Ab peptide that releases Ab from C99.<br />

This cleavage occurs in the vicinity of residue 712 of the<br />

C-terminus. g-secretase can cleave the C-terminal region<br />

at either Val 711 or Ile 713 to produce a shorter Ab peptide<br />

(Ab 1-40 ) or the longer Ab peptide (Ab 1-42 ). The predominant<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Neurobiology/Neurodegeneration<br />

form of Ab found in the cerebrospinal fluid is the shorter<br />

Ab 40 peptide. Despite its lower rate of synthesis, Ab 42 is the<br />

peptide that is initially deposited within the extracellular<br />

plaques of AD patients. In addition, Ab 42 is shown to<br />

aggregate at a much lower concentration than the Ab 40<br />

form.<br />

APP can also be processed by a-secretase (TACE), which<br />

cleaves within the Ab domain between Lys 687 and Leu 688<br />

and produces a large soluble a-APP domain and the Cterminal<br />

fragment containing P3 and C83. The latter can<br />

then be cleaved by g-secretase at residue 711 or 713 to<br />

release the P3 fragment. This pathway does not yield Ab<br />

peptide. Hence, shunting APP towards the a-secretase<br />

pathway may have a beneficial effect in lowering Ab<br />

peptide levels.<br />

The characterization of APP secretases during the past<br />

few years has provided significant advancement in<br />

therapeutic strategies that may lead to limiting the build<br />

up of Ab peptide in the brain and eliminate or delay<br />

the pathological effects of AD. Recent characterization<br />

of secretases has uncovered several common<br />

features, particularly their sensitivity to certain<br />

metalloproteinase inhibitors and up-regulation of their<br />

activity by phorbol esters. Presenilins and g-secretases<br />

are considered to be the best molecular targets for<br />

developing therapeutic agents that may minimize the<br />

debilitating effects of AD. Major targets in AD research<br />

are identifying the genetic and environmental factors<br />

responsible for b-amyloid build-up in nerve cells.<br />

References:<br />

Tomita, T. and Iwantsubo, T. 2006. Curr. Pharm. Res. 12, 66 .<br />

Steiner, H., et al. 2004. Curr. Alzheimer Res. 1, 75.<br />

Marlow, L., et al. 2003. J. Mol. Neurosci. 20, 233.<br />

Wilson, C.A., et al. 2003. J. Neurosci. Res. 74, 36 .<br />

Li, Y-M. 200 . Mol. Interv. 1, 98.<br />

Selkoe, D.J. 200 . Physiol. Rev. 81, 74 .<br />

Li, Y-M., et al. 2000. Nature 405, 689.<br />

Zhang, Z., et al. 2000. Nat. Cell Biol. 2, 463.<br />

Haass, C., and De Stooper, B. 999. Science 286, 9 6,<br />

Sinha, S., and Lieberburg, I. 999. Proc. Natl. Acad. Sci. USA 96, 049.<br />

Chen, M. 997. FEBS Lett. 417, 63.<br />

Selkoe, D. J. 997. Science 275, 630.<br />

Schweuner, D., et al. 996. Nat. Med. 8, 864.<br />

Citron, M., et al. 994. Proc. Natl. Acad. Sci. USA 91, 993.<br />

More online... www.calbiochem.com/inhibitors/secretase<br />

Technical Support<br />

Phone 800 628 8470<br />

E-mail calbiochem@emdbiosciences.com<br />

99


Neurobiology/Neurodegeneration<br />

Secretase <strong>Inhibitor</strong>s/Blockers of Ab Production<br />

Product Cat. No. Cell-permeable Reversible<br />

APP-b-Secretase <strong>Inhibitor</strong><br />

[KTEEISEVN(Stat)VAEF]<br />

Calpain <strong>Inhibitor</strong> I<br />

(ALLN; Ac-LLNle-CHO)<br />

Calpain <strong>Inhibitor</strong> III<br />

(MDL 28 70; Z-VF-CHO)<br />

Calpeptin<br />

(Z-LNle-CHO)<br />

7 60 No Yes<br />

2087 9 Yes Yes<br />

208722 Yes Yes<br />

03-34-005 Yes Yes<br />

Indomethacin 405268 Yes No<br />

MG- 32<br />

(Z-LLL-CHO)<br />

InSolution OM99-2<br />

(EVNLYAAEF) 474790 Yes Yes<br />

496000 No Yes<br />

Pepstatin A Methyl Ester 5 6485 Yes Yes<br />

b-Secretase <strong>Inhibitor</strong> II<br />

(Z-VLL-CHO)<br />

565749 Yes Yes<br />

b-Secretase <strong>Inhibitor</strong> III<br />

[EVN(Stat)VAEF-NH ] 2<br />

565780 No Yes<br />

b-Secretase <strong>Inhibitor</strong> IV 565788 Yes Yes<br />

N g-Secretase <strong>Inhibitor</strong> I<br />

(Z-LLNle-CHO)<br />

565750 Yes Yes<br />

g-Secretase <strong>Inhibitor</strong> II<br />

[Boc-VI-NHCH(CH )-COCF CO-NHVI-OCH ; MW 67]<br />

3 2 3<br />

565755 Yes Yes<br />

g-Secretase <strong>Inhibitor</strong> III<br />

(Z-LL-CHO)<br />

565760 Yes Yes<br />

g-Secretase <strong>Inhibitor</strong> IV<br />

(2-Naphthoyl-VF-CHO)<br />

56576 Yes Yes<br />

g-Secretase <strong>Inhibitor</strong> V<br />

(Z-VF-CHO)<br />

565762 Yes Yes<br />

g-Secretase <strong>Inhibitor</strong> VI<br />

{ -(S)-endo-N-( ,3,3)Trimethylbicyclo[2.2. ]<br />

hept-2yl)-4-fluorophenyl sulfonamide}<br />

565763 Yes Yes<br />

g-Secretase <strong>Inhibitor</strong> VII<br />

(MOC-LL-CHO)<br />

565768 Yes Yes<br />

g-Secretase <strong>Inhibitor</strong> IX (DAPT) 565770 Yes Yes<br />

N InSolution g-Secretase <strong>Inhibitor</strong> IX 565784 Yes Yes<br />

InSolution g-Secretase <strong>Inhibitor</strong> X<br />

(L-685,458)<br />

56577 Yes Yes<br />

g-Secretase <strong>Inhibitor</strong> XI<br />

(JLK6)<br />

565772 Yes No<br />

g-Secretase <strong>Inhibitor</strong> XII<br />

(Z-IL-CHO)<br />

565773 Yes Yes<br />

g-Secretase <strong>Inhibitor</strong> XIII<br />

(Z-YIL-CHO)<br />

565774 Yes Yes<br />

g-Secretase <strong>Inhibitor</strong> XIV<br />

[Z-C(t-Bu)-IL-CHO]<br />

565775 Yes Yes<br />

g-Secretase <strong>Inhibitor</strong> XVI<br />

(DAPM)<br />

565777 Yes Yes<br />

InSolution g-Secretase <strong>Inhibitor</strong> XVII<br />

(WPE-III-3 C)<br />

565778 Yes Yes<br />

InSolution g-Secretase <strong>Inhibitor</strong> XIX 565787 Yes Yes<br />

N g-Secretase <strong>Inhibitor</strong> XX 565789 Yes Yes<br />

N g-Secretase <strong>Inhibitor</strong> XXI 565790 Yes Yes<br />

N g -Secretase <strong>Inhibitor</strong> I<br />

40<br />

(trans-3,5-DMC-IL-CHO)<br />

565765 Yes Yes<br />

g -Secretase <strong>Inhibitor</strong> II<br />

40<br />

(Boc-GVV-CHO)<br />

565766 Yes Yes<br />

00 Orders Phone 800 854 34 7<br />

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Web www.emdbiosciences.com/calbiochem


Secretase <strong>Inhibitor</strong>s<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Neurobiology/Neurodegeneration<br />

Product Cat. No. Comments Size Price<br />

Bafilomycin A , Streptomyces<br />

griseus<br />

196000 A specific inhibitor of vacuolar-type H + -ATPase (V-type; K i = 500 pM)<br />

that selectively inhibits b-secretase activity.<br />

MG- 32 474790 (Carbobenzoxy-L-leucyl-L-leucyl-L-leucinal; Z-LLL-CHO)<br />

A potent, reversible, and cell-permeable proteasome inhibitor<br />

(K i = 4 nM). Blocks the maturation of APP Swedish mutant (APPSw)<br />

preventing cleavage by b-secretase. Inhibits NF-kB activation<br />

(IC 50 = 3 mM).<br />

InSolution OM99-2 496000 (EVNLYAAEF)<br />

Supplied as a mM solution in 280 ml of DMSO. A peptidomimetic,<br />

highly potent, tight-binding transition-state analog inhibitor of<br />

b-secretase (K i = .6 nM, recombinant memapsin-2; K i = 9.58 nM,<br />

recombinant pro-memapsin 2). Designed from the template of the bsecretase<br />

site of Swedish b-amyloid precursor protein (APP) with Asp<br />

to Ala replacement.<br />

Pepstatin A Methyl Ester 516485 (Isovaleryl-V V-Sta-A-Sta-OCH ; PME)<br />

3<br />

A cell-permeable methyl ester derivative of Pepstatin A (Cat. No.<br />

5 648 ) that acts as a potent, non-competitive transition-state analog<br />

inhibitor of g-secretase (K = 50 nM, K = 320 nM for human g-<br />

is ii<br />

secretase at 20˚C; K is the inhibition constant for inhibitor binding to<br />

is<br />

the free enzyme and K is the inhibition constant for inhibitor binding to<br />

ii<br />

the Enzyme-Substrate complex).<br />

b-Secretase <strong>Inhibitor</strong> II 565749 (N-Benzyloxycarbonyl-Val-Leu-leucinal; Z-VLL-CHO)<br />

A potent, cell-permeable, and reversible inhibitor of b-secretase.<br />

Corresponds to the b-secretase cleavage site (VNL-DA) of the Swedish<br />

mutant Amyloid Precursor Protein (APP). Inhibits the formation of<br />

both Ab (IC = 700 nM) and Ab (IC = 2.5 mM in Chinese hamster<br />

total 50 -42 50<br />

ovary (CHO) cells transfected with wild-type APP75 ).<br />

b-Secretase <strong>Inhibitor</strong> III 565780 (H-EVNstatineVAEF-NH ; <strong>Inhibitor</strong> GL189)<br />

2<br />

A substrate analog inhibitor of b-secretase (BACE) that completely<br />

blocks the proteolytic activity (at 5 mM) in solubilized membrane<br />

fractions from BACE transfected MDCK cells.<br />

N b-Secretase <strong>Inhibitor</strong> IV 565788 Binds to BACE- active site and blocks its proteolytic activity<br />

(IC 50 = 5 nM for human BACE- ).<br />

g-Secretase <strong>Inhibitor</strong> I 565750 (Z-LLNle-CHO)<br />

A cell-permeable inhibitor of g-secretase activity.<br />

g-Secretase <strong>Inhibitor</strong> II 565755 (MW167)<br />

A cell-permeable, reversible, and selective peptidomimetic inhibitor of<br />

g-secretase (IC = 3 mM for total inhibition of Ab). Displays only weak<br />

50<br />

inhibitory activity against calpain II (IC = 00 mM in a purified enzyme<br />

50<br />

assay).<br />

g-Secretase <strong>Inhibitor</strong> III 565760 (N-Benzyloxycarbonyl-Leu-leucinal; Z-LL-CHO)<br />

A cell-permeable, specific, and reversible inhibitor of g-secretase<br />

that reduces the formation of both Ab (IC ~35 mM) and Ab in<br />

total 50 –42<br />

Chinese hamster ovary (CHO) cultures stably transfected with amyloid<br />

precursor protein-75 . Reported to be nontoxic in nature.<br />

g-Secretase <strong>Inhibitor</strong> IV 565761 [N-(2-Naphthoyl)-Val-phenylalaninal; 2-Naphthoyl-VF-CHO]<br />

A cell-permeable, reversible inhibitor of g-secretase. Inhibits the<br />

release of Ab (ED = 2.6 mM) and Ab (ED = 2.7 mM) in HEK293<br />

x-40 50 x-42 50<br />

cells stably transfected with the APP Swedish mutants.<br />

g-Secretase <strong>Inhibitor</strong> V 565762 (N-Benzyloxycarbonyl-Leu-phenylalaninal; Z-LF-CHO)<br />

A cell-permeable, reversible inhibitor of g-secretase. Reported to inhibit<br />

the release of Ab (ED = 5.0 mM) in HEK293 cells stably transfected<br />

x-40 50<br />

with the APP Swedish mutants.<br />

g-Secretase <strong>Inhibitor</strong> VI 565763 {1-(S)-endo-N-(1,3,3)-Trimethylbicyclo[2.2.1]hept-2-yl)-4-fluorophenyl<br />

Sulfonamide}<br />

A cell-permeable inhibitor of Ab production (IC = .8 mM).<br />

42 50<br />

Treatment of HEK293 cells with this inhibitor results in an increase in<br />

b-secretase-cleaved APP fragments and secreted APP a. s<br />

0 mg $ 7<br />

mg<br />

5 mg<br />

$34<br />

$98<br />

250 mg $329<br />

mg $67<br />

mg<br />

5 mg<br />

$52<br />

$ 97<br />

500 mg $93<br />

mg $ 49<br />

mg $ 04<br />

mg $ 74<br />

mg<br />

5 mg<br />

$52<br />

$203<br />

mg $99<br />

mg $99<br />

5 mg $ 50<br />

Technical Support<br />

Phone 800 628 8470<br />

E-mail calbiochem@emdbiosciences.com<br />

0


Neurobiology/Neurodegeneration<br />

Secretase <strong>Inhibitor</strong>s, continued<br />

Product Cat. No. Comments Size Price<br />

g-Secretase <strong>Inhibitor</strong> VII 565768 [Compound A; MOC-LL-CHO (MOC = menthyloxycarbonyl)]<br />

A cell-permeable, reversible inhibitor of Ab and p3 secretion (Ab 40<br />

IC 50 = 2.3 mM; Ab 42 IC 50 = 3 mM). Reported to be more potent<br />

(IC 50 = 900 nM and 740 nM for Ab 40 and Ab 42 , respectively) in the<br />

presence of C99 inhibitor ( 0 mM).<br />

g-Secretase <strong>Inhibitor</strong> IX 565770 {DAPT; N-[N-(3,5-Difluorophenacetyl-L-alanyl)]-S-phenylglycine t-Butyl<br />

Ester}<br />

A cell-permeable dipeptide that reduces Ab production by blocking<br />

g-secretase (Ab total IC 50 = 5 nM, Ab 42 IC 50 = 200 nM). Reported to be<br />

functionally active in both HEK293 cells and neuronal cultures without<br />

affecting the secretion of amyloid-b precursor protein.<br />

N InSolution g-Secretase <strong>Inhibitor</strong> IX 565784 {DAPT; N-[N-(3,5-Difluorophenacetyl-L-alanyl)]-S-phenylglycine t-Butyl<br />

Ester}<br />

A 25 mM (5 mg/462 ml) solution of g-Secretase <strong>Inhibitor</strong> IX<br />

(Cat. No. 565770) in DMSO.<br />

InSolution g-Secretase <strong>Inhibitor</strong> X 565771 {L-685,458; {1S-Benzyl-4R-[1-(1S-carbamoyl-2-phenethylcarbamoyl)-<br />

1S-3-methylbutylcarbamoyl]-2R-hydroxy-5-phenylpentyl}carbamic Acid<br />

tert-butyl Ester}<br />

g-Secretase <strong>Inhibitor</strong> XI 565772<br />

Supplied as a mM solution in 372 ml of DMSO. A cell-permeable,<br />

highly specific and potent inhibitor of g-secretase (Ab IC =<br />

total 50<br />

7 nM, Ab IC = 48 nM, and Ab IC = 67 nM in SH-SY5Y cells<br />

40 50 42 50<br />

overexpressing spbA4CTF). Binds to presenilin and blocks Notch<br />

intracellular domain production. Functions as a transition state analog<br />

mimic at the catalytic site of an aspartyl protease. Exhibits over 00fold<br />

greater selectivity for g-secretase than for cathepsin D.<br />

(7-Amino-4-chloro-3-methoxyisocoumarin; JLK6)<br />

A cell-permeable, active site-directed, irreversible serine protease<br />

inhibitor that acts as a highly selective, potent inhibitor of g-secretase.<br />

Blocks production of both amyloid-b (Ab ) and Ab < 00 mM in<br />

40 40 42<br />

HEK293 cells expressing wild-type and Swedish mutant b-amyloid<br />

precursor protein.<br />

g-Secretase <strong>Inhibitor</strong> XII 565773 (Z-IL-CHO)<br />

A cell-permeable, reversible dipeptide aldehyde that reduces Ab<br />

production by blocking g-secretase in vitro (Ab IC = 7.9 mM;<br />

40 50<br />

Ab IC = 7.6 mM) and in cultured CHO cells that stably overexpress<br />

42 50<br />

APP695 (Ab IC = .5 mM; Ab IC = 8.3 mM). Also blocks the<br />

40 50 42 50<br />

generation of g CTF (g-secretase-generated C-terminal fragment).<br />

Does not affect the formation of amyloid-b precursor protein.<br />

g-Secretase <strong>Inhibitor</strong> XIII 565774 (Z-YIL-CHO)<br />

A cell-permeable, reversible inhibitor of g-secretase. In TPA-stimulated<br />

T47- 4 cells, it abolished nuclear localization of ErbB-4 receptor<br />

tyrosine kinase by inhibiting the formation of the s80 ErbB-4 fragment.<br />

g-Secretase <strong>Inhibitor</strong> XIV 565775 [Z-Ct-Bu)-IL-CHO]<br />

A cell-permeable, reversible inhibitor of g-secretase that reduces Ab<br />

production (Ab IC = 90 nM; Ab IC = 780 nM) in solubilized<br />

40 50 42 50<br />

membrane preparations and in cultured APP695 expressing CHO cells<br />

(Ab IC = 80 nM; Ab IC = 20 nM).<br />

40 50 42 50<br />

g-Secretase <strong>Inhibitor</strong> XVI 565777 (DAPM; N-[N-3,5-Difluorophenacetyl]-L-alanyl-S-phenylglycine Methyl Ester)<br />

A cell-permeable g-secretase inhibitor with anti-aggregation property<br />

(Ab IC ~ 0 nM in 7PA2 cells). Prevents early Ab oligomerization by<br />

50<br />

selectively blocking the Ab dimer and trimer formation.<br />

InSolution g-Secretase <strong>Inhibitor</strong><br />

XVII<br />

565778 (31C; WPE-III-31C)<br />

Supplied as a 5 mM (500 mg/ 56 ml) solution in DMSO. A cellpermeable<br />

(hydroxyethyl) urea peptidomimetic that acts as a<br />

transition-state analog inhibitor of g-secretase (IC 50 = 300 nM for Ab<br />

production in whole cells). Binds the presenilin-g-secretase complex<br />

(PS -NTF, PS -CTF, Nicastrin, and C83 APP CTF).<br />

mg $ 07<br />

5 mg $93<br />

5 mg $93<br />

250 mg $254<br />

5 mg $98<br />

5 mg $ 57<br />

5 mg $ 73<br />

5 mg $ 73<br />

5 mg $96<br />

500 mg $ 56<br />

02 Orders Phone 800 854 34 7<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

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Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Neurobiology/Neurodegeneration<br />

Product Cat. No. Comments Size Price<br />

InSolution g-Secretase <strong>Inhibitor</strong><br />

XIX<br />

565787 {(2S,3R)-3-(3,4-Difluorophenyl)-2-(4-fluorophenyl)-4-hydroxy-N-<br />

((3S)-2-oxo-5-phenyl-2,3-dihydro-1H-benzo[e][1,4]diazepin-3-yl)butyramide}<br />

Supplied as a 5 mM ( 00 mg/37 ml) solution in DMSO. A cell-permeable,<br />

highly potent g-secretase inhibitor (IC 50 = 60 pM towards Ab 40<br />

secretion in SH-SY5Y cells overexpressing spbA4CTF).<br />

N g-Secretase <strong>Inhibitor</strong> XX 565789 A cell-permeable, potent g-secretase inhibitor. Significantly lowers<br />

both the brain and plasma Ab 40 levels by ~72% in Tg2576 mutant APP<br />

transgenic mouse model ( 00 mM/kg, b.i.d.). Also potently inhibits<br />

Notch processing (IC 50 = .7 nM in SupT cells), and induces conversion<br />

of proliferative crypt cells into post-mitotic goblet cells in both<br />

C57BL/6 and APC Min mouse model ( 0 mM/kg, i.p.).<br />

N g-Secretase <strong>Inhibitor</strong> XXI 565790 A cell-permeable, potent, and selective peptidomimetic and nontransition-state<br />

analog inhibitor of g-secretase and Notch processing<br />

(IC 50 = 300 pM for Ab 40 in CHO cells overexpressing wild type bAPP;<br />

240 pM for Ab 40 , 370 pM Ab 42 and 320 pM for NICD, respectively, in<br />

HEK293 cells stably transfected with bAPP 695 and mNotchDE(M 727V);<br />

00 pM for both Ab 40 and Ab 42 in SH-SY5Y cells stably transfected<br />

with SPA4CT). Also lowers Ab levels in several APP transgenic mouse<br />

model. Reported to bind to presenilins and suppress the proteolytic<br />

ability to cleave several transmembrane protein substrates, including<br />

APLP and APLP2, CD44, ErbB4, E-cadherin, low density lipoprotein<br />

receptor-related proteins, Notch ligands, and p75 NTR . Yet, at higher<br />

concentrations (200-400 mM) only weakly affects presenilin activity.<br />

N<br />

Secretase <strong>Inhibitor</strong>s, continued<br />

g -Secretase <strong>Inhibitor</strong> I 40 565765 [N-trans-3,5-Dimethoxycinnamoyl)-Ile-leucinal; t-3,5-DMC-IL-CHO]<br />

A potent, cell-permeable, reversible inhibitor of g-secretase that<br />

preferentially inhibits the secretion of Ab (>90%) vs. Ab (~ 5%).<br />

-40 -42<br />

IC = ~ 5 mM for Ab , ~22 mM for Ab , and >50 mM for Ab in<br />

50 total -40 -42<br />

CHO cells stably transfected with cDNA encoding bAPP695. Reported<br />

to be be about 0-fold more potent than Z-Val-Phe-CHO (MDL 28 70;<br />

Cat. No. 208722).<br />

g -Secretase <strong>Inhibitor</strong> II 40 565766 (N-tert-Butyloxycarbonyl-Gly-Val-Valinal)<br />

A cell-permeable, substrate-based (g -site) g-secretase inhibitor that<br />

40<br />

is reported to preferentially (> 90%) inhibit Ab cleavage at site 40 vs.<br />

42, in a dose-dependent fashion, in transiently transfected 293T cells<br />

over-expressing APP695NL.<br />

Related Products<br />

InnoZyme TACE Activity Kit<br />

The InnoZyme TACE Activity Kit is a specific and sensitive assay kit<br />

designed to measure human TACE activity in cell lysates and biological<br />

samples and for screening enzyme inhibitors. An anti-human TACE<br />

monoclonal antibody pre-coated on a 96-well plate captures human<br />

TACE. The activity of captured TACE is measured using an internally<br />

quenched fluorescent substrate, MCA-KPLGL-Dpa-AR-NH 2 . Cleavage<br />

of the scissile amide bond, G-L, releases the fluorophore from the<br />

quenching molecule, Dpa, resulting in an increase in fluorescence.<br />

The level of fluorescence is directly related to the enzyme activity.<br />

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03


Nitric Oxide/Oxidative Stress<br />

Nitric Oxide/Oxidative Stress<br />

Arginase <strong>Inhibitor</strong>s<br />

Arginase, an Mn 2+ metalloenzyme, catalyzes the<br />

hydrolysis of L-arginine to yield L-ornithine and urea<br />

in ureotelic animals. Based on their distribution, two<br />

isoforms of arginase have been described. Type I arginase,<br />

a cytosolic enzyme, is found in the hepatic tissue and<br />

besides participating in the urea cycle, it also plays<br />

a significant role in limiting the supply of arginine<br />

for nitric oxide (•NO) synthesis. Type II arginase is a<br />

mitochondrial enzyme found in extrahepatic tissues, and<br />

is involved in the regulation of extra-urea cycle arginine<br />

metabolism and in the down-regulation of NO synthesis.<br />

Arginase <strong>Inhibitor</strong>s<br />

Product Cat. No. Comments Size Price<br />

BEC, Hydrochloride 197900 [(S)-(2-Boronoethyl)-L-cysteine, HCI)]<br />

A slow-binding, competitive transition state inhibitor of arginase I<br />

and II (K i = 3 3 nM for human recombinant type II arginase).<br />

N G -Hydroxy-L-arginine,<br />

Monoacetate Salt<br />

N w -Hydroxy-nor-L-arginine,<br />

Diacetate Salt<br />

DL-a-Difluoromethylornithine,<br />

Hydrochloride<br />

399250 (NOHA, AcOH)<br />

A cell-permeable inhibitor of liver and macrophage arginase<br />

(K i = 50 mM).<br />

Due to the reciprocal regulation between arginase and<br />

nitric oxide synthase, arginase inhibitors are considered<br />

to have therapeutic potential in treating NO-dependent<br />

smooth muscle disorders, such as erectile dysfunctions<br />

and polyamine induced bronchial constriction.<br />

References:<br />

Colleluori, D.M., and Ash, D.E. 200 . Biochemistry 40, 9356.<br />

Ozaki, M., et al. 999. J. Biochem. 125, 586.<br />

Salimuddin et al. 999. Am J. Physiol. Endocrinol. Metab. 277, E 0.<br />

Morris, S.M. Jr., et al. 998. Am J. Physiol. Endocrinol. Metab. 275, E740.<br />

More online... www.calbiochem.com/inhibitors/arginase<br />

399275 [L-2-Amino-(4-(2´-hydroxyguanidino)butyric Acid, 2CH 3 CO 2 H; nor-NOHA,<br />

2CH 3 CO 2 H]<br />

A potent, selective, competitive, and high affinity inhibitor of arginase<br />

(IC 50 = 2 mM for rat liver arginase).<br />

288500 (DFMO; Eflornithine; RMI-71782)<br />

An arginase inhibitor that potentiates vasodilatory effects of adenosine<br />

and also acts as an irreversible inhibitor of ornithine decarboxylase.<br />

5 mg $ 40<br />

5 mg $87<br />

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Glutathione S-Transferase (GST) <strong>Inhibitor</strong>s<br />

Glutathione S-transferases (GSTs) constitute a family<br />

of phase II detoxification isozymes that catalyze<br />

the conjugation of glutathione with a number of<br />

hydrophobic compounds. Due to high expression of GSTs<br />

in tumors compared to normal tissues and their high<br />

level in plasma from cancer patients, these enzymes<br />

are considered to be cancer markers. All species<br />

possess multiple cytosolic and membrane-bound GST<br />

isozymes. These isozymes differ in their tissue-specific<br />

expression and distribution. They provide protection to<br />

mammalian cells against the toxic and neoplastic effects<br />

of electrophilic metabolites of carcinogens and reactive<br />

oxygen species. Increased expression of GST isozymes<br />

Glutathione S-Transferase <strong>Inhibitor</strong>s<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Nitric Oxide/Oxidative Stress<br />

has been linked to the development of resistance to<br />

alkylating cytostatic drugs. Their deficiency reportedly<br />

increases predisposition to various forms of cancer.<br />

Hence, GST status may be a useful prognostic factor to<br />

determine the clinical outcome of chemotherapy.<br />

References:<br />

Wu, Z., et al. 2004. J. Med. Chem. 47, 3282.<br />

Dirven, H.A., et al. 995. Chem. Res. Toxicol. 8, 979.<br />

Kolm, R.H., et al. 995. Biochem. J. 311, 453.<br />

Cameron, A.D., et al. 995. Structure 3, 7 7<br />

Talalay, P., et al. 995. Toxicol. Lett. 82-83, 73.<br />

More online... www.calbiochem.com/inhibitors/GST<br />

Product Cat. No. Comments Size Price<br />

Caffeic Acid 205546 (3,4-Dihydroxycinnamic Acid)<br />

An effective, irreversible inhibitor of glutathione S-transferases and a<br />

non-competitive inhibitor of xanthine oxidase. Also acts as a selective,<br />

non-competitive inhibitor of 5-lipoxygenase (ID 50 = 3.7 uM).<br />

Luteolin 440025 (3´,4´,5,7-Tetrahydroxyflavone)<br />

An antioxidant flavonoid and a free radical scavenger that is shown to<br />

inhibit rat liver cytosolic glutathione S-transferase activity.<br />

Sulfasalazine 573500 A cell-permeable anti-inflammatory agent that acts as an inhibitor<br />

of glutathione-S-transferase (IC 50 = 0 mM in HG9 cell line). Strongly<br />

inhibits NF-kB activation and potently induces apoptosis in Tlymphocytes.<br />

Causes neutrophil apoptosis that can be abrogated by<br />

tyrosine kinase inhibitors, protein kinase A inhibitors, or antioxidants.<br />

Also inhibits basic fibroblast growth factor-induced endothelial cell<br />

chemotaxis.<br />

500 mg $48<br />

5 mg $58<br />

00 mg $33<br />

Technical Support<br />

Phone 800 628 8470<br />

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05


Nitric Oxide/Oxidative Stress<br />

Guanylate Cyclase (GC) <strong>Inhibitor</strong>s<br />

Guanylyl cyclase (GC) catalyzes the formation of the<br />

second messenger cyclic GMP (cGMP) from GTP and<br />

exists in both the soluble and particulate fractions. The<br />

soluble enzyme can be regulated by free radicals and<br />

nitrovasodialators, whereas the particulate enzyme can<br />

be regulated by various peptides. cGMP signaling is<br />

mediated by cGMP-activated protein kinases, the cGMPregulated<br />

phosphodiesterases and the cGMP-gated ion<br />

channels. The action of cGMP is terminated by the action<br />

of cGMP-degrading phosphodiesterases. GC is present<br />

either as soluble (sGC) or as membrane-bound enzyme<br />

linked to a receptor. sGC is activated by another second<br />

messenger, nitric oxide (NO). Membrane-bound GC, on<br />

the other hand, is activated by hormones. The prosthetic<br />

heme group of sGC acts as the NO sensor, and binding of<br />

NO induces conformational changes leading to an up to<br />

200-fold activation of the enzyme. The organic nitrates<br />

commonly used in the therapy of coronary heart disease<br />

exert their effects via stimulation of this enzyme. Two<br />

isoforms of the NO-sensitive heterodimeric enzyme have<br />

been identified, the ubiquitous a1b1 isoform and the less<br />

broadly distributed a2b1 isoform. These two forms differ<br />

in their subcellular distribution.<br />

Membrane-bound GCs are receptor-linked enzymes with<br />

one membrane-spanning region. Although all of these<br />

GCs share a conserved intracellular catalytic domain,<br />

they differ in their extracellular ligand-binding domains<br />

and are activated by different peptide hormones.<br />

Guanylate Cyclase <strong>Inhibitor</strong>s<br />

The guanylyl cyclase A (GC-A) isoform acts as the<br />

receptor for the natriuretic peptides, ANP and BNP,<br />

and hormones that are involved in the regulation of<br />

blood pressure as well as in the water and electrolyte<br />

household. GC-B is mainly found in the vascular<br />

endothelium and is thought to participate in smooth<br />

muscle relaxation. It displays the highest affinity for the<br />

natriuretic peptide of the C-type (CNP). GC-C is reported<br />

to bind the peptide hormone guanylin found in the<br />

intestine, where it is involved in salt and water balance.<br />

GC-C is stimulated by the heat-stable enterotoxin<br />

produced by E. coli.<br />

References:<br />

Friebe, A., and Koesling, D. 2003. Cir. Res. 93, 96.<br />

Denninger, J.W., and Marletta M.A. 999. Biochim. Biophys. Acta 1411, 334.<br />

Russwurm, M., and Koesling, D. 2002. Mol. Cell Biochem. 230, 59.<br />

Koesling, D., and Friebe, A. 999. Rev. Physiol. Biochem. Pharmacol. 135, 35.<br />

More online... www.calbiochem.com/inhibitors/GCI<br />

Product Cat. No. Comments Size Price<br />

LY 83583 440205 (6-Anilino-5,8-quinolinequinone)<br />

A cell-permeable, competitive inhibitor of soluble guanylate cyclase<br />

(IC 50 = 2 mM). Lowers the production of cGMP levels in a wide range of<br />

tissues by blocking intracellular Ca 2+ release, with negligible effect on<br />

cAMP levels. Inhibits nitric oxide-induced smooth muscle relaxation.<br />

Methylene Blue 457250 [3,7-bis(Dimethylamino)phenothiazin-5-ium Chloride]<br />

An inhibitor of soluble guanylate cyclase that acts as an organic spintrap.<br />

Forms stable adducts with oxygen free radicals in solution.<br />

NS 2028 492030 [4H-8-Bromo-1,2,4-oxadiazolo(3,4-d)benz(b)(1,4)oxazin-1-one]<br />

A potent, specific, and irreversible inhibitor of soluble guanylyl cyclase<br />

(IC 50 = 30 nM for basal and 200 nM for NO-stimulated enzyme activity;<br />

IC 50 = 7 nM for S-nitrosoglutathione-enhanced soluble guanylyl<br />

cyclase activity in homogenates of mouse cerebellum).<br />

ODQ 495320 (1H-[1,2,4]Oxadiazolo[4,3-a]quinoxalin-1-one)<br />

A cell-permeable, potent and selective inhibitor of nitric oxide (NO)sensitive<br />

soluble guanylyl cyclase (IC 50 = 20 nM). In cerebellum slices,<br />

ODQ is shown to reversibly inhibit the NO-dependent cGMP response to<br />

glutamate receptor agonists without affecting NOS activity.<br />

06 Orders Phone 800 854 34 7<br />

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Guanylate Cyclase <strong>Inhibitor</strong>s, continued<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Nitric Oxide/Oxidative Stress<br />

Product Cat. No. Comments Size Price<br />

Zinc (II) Protoporphyrin IX 691550 (ZnPP-9)<br />

A potent and selective inhibitor of heme oxygenase, the enzyme<br />

generates carbon monoxide (CO) and biliverdin. Inhibits<br />

soluble guanylyl cyclase and produces a time- and concentrationdependent<br />

inactivation of all three isoforms of nitric oxide synthase<br />

(IC = 800 nM, 4.0 mM, and 5.0 mM for nNOS, iNOS, and eNOS,<br />

50<br />

respectively). Inhibits relaxation induced by acetylcholine, ANP, and<br />

VIP in isolated rat aorta. Blocks interleukin- and prevents induction<br />

of long-term potentiation. Also useful as an indicator of iron-deficient<br />

erythropoiesis. Does not cross the blood-brain barrier.<br />

25 mg $53<br />

Technical Support<br />

Phone 800 628 8470<br />

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07


Nitric Oxide/Oxidative Stress<br />

Nitric Oxide Synthase (iNOS, bNOS, eNOS) <strong>Inhibitor</strong>s<br />

Nitric oxide (•NO), a highly reactive, diffusible,<br />

and unstable radical, plays an important role in<br />

the regulation of a wide range of physiological<br />

processes, including cellular immunity, angiogenesis,<br />

neurotransmission, and platelet aggregation. •NO is<br />

synthesized from L-arginine by the action of nitric<br />

oxide synthase (NOS) in a two-step oxidation process.<br />

Free •NO is a transient species with a half-life of only<br />

about five seconds. Hence, most studies on •NO action<br />

are based on the activity of NOS. •NO can diffuse<br />

across the cell membrane and react with a variety of<br />

targets. Reaction of •NO with O 2 in aqueous solutions<br />

produces the relatively unreactive nitrate and nitrite<br />

ions as products. However, •NO can rapidly react with<br />

superoxide to produce highly reactive peroxynitrite<br />

(ONOO - ). Almost all biological effects of •NO are<br />

achieved either directly or through other reactive<br />

nitrogen intermediates.<br />

NOS is known to exist in three isoforms: (a) a soluble<br />

constitutively expressed enzyme found in high<br />

concentrations in the brain (bNOS, nNOS, or NOS-1),<br />

(b) a constitutively expressed endothelial membrane<br />

bound enzyme (eNOS or NOS-3), and (c) an inducible<br />

enzyme (iNOS or NOS-2) that is associated with the<br />

cytotoxic function of macrophages. These enzymes<br />

exist as homodimers, each monomer consisting of two<br />

major domains: an N-terminal oxygenase domain<br />

and a C-terminal reductase domain. The interdomain<br />

linker contains the calmodulin-binding sequence. These<br />

three isoforms exhibit similarities in their structure<br />

and mechanism of action. Calmodulin is required for<br />

the activity of all three isoforms. The activation of<br />

the constitutively expressed isoforms requires Ca 2+ -<br />

dependent binding of calmodulin to the enzyme.<br />

However, in the case of iNOS, calmodulin is irreversibly<br />

bound to the enzyme and its activity is regulated by<br />

its rate of synthesis rather than by Ca 2+ concentration.<br />

In the absence of calmodulin iNOS is highly unstable.<br />

For their catalytic activities NOS isoforms require<br />

three distinct domains: (a) a reductase domain, (b) a<br />

calmodulin-binding domain, and (c) an oxygenase<br />

domain. The reductase domain contains the FAD and<br />

FMN moieties. The oxygenase domain, which contains<br />

the binding sites for heme, tetrahydrobiopterin, and<br />

arginine, catalyzes the conversion of L-arginine to<br />

citrulline and •NO. The maximal rate of •NO synthesis<br />

is established by the intrinsic maximum ability of<br />

the reductase domain to deliver electrons to the heme<br />

domain.<br />

Because of the involvement of all the three NOS<br />

isozymes in various aspects of signal transduction, NOS<br />

inhibitors have gained prominence in the management<br />

of ischemic reperfusion injury, hypotensive effects of<br />

drugs, and inflammatory response to cytokines.<br />

References:<br />

Achike, F.I., and Kwan, C.Y. 2003. Clin. Exp. Pharmacol. Physiol. 30, 605.<br />

Chu, C.J., et al. 2000. Clin. Sci. 99, 475.<br />

Mori. M., and Gotoh, T. 2000. Biochem. Biophys. Res. Commun. 275, 7 5.<br />

Wang, Y. et al. 999. Crit. Rev. Neurobiol. 13, 2 .<br />

Stuehr, D.J. 999. Biochim. Biophys. Acta 1411, 2 7.<br />

Moncada, S. 999. J. R. Soc. Med. 92, 64.<br />

Michel, T. 999. Braz. J. Med. Biol. Res. 32, 36 .<br />

Jaffrey, S.R., and Snyder, S.H. 996. Science 274, 774.<br />

More online... www.calbiochem.com/inhibitors/NOS<br />

08 Orders Phone 800 854 34 7<br />

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Characteristics of various forms of Nitric Oxide Synthases<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Nitric Oxide/Oxidative Stress<br />

Enzyme Gene Number of Residues Cellular Localization and Expression Regulation<br />

nNOS NOS1 429- 433 Brain: mainly soluble skeletal muscle: mainly particulate Ca 2+ /CaM<br />

iNOS NOS2 44- 53 Variety of cells: mainly soluble Cytokine-inducible<br />

Ca 2+ -independent<br />

eNOS NOS3 203- 205 Vascular endothelial cells and cardiomyocytes: mainly<br />

particulate<br />

Biological Activities of Selected Nitric Oxide Synthase <strong>Inhibitor</strong>s (IC 50 values in mM)<br />

Product Cat. No. eNOS iNOS bNOS<br />

400W 00050 50* 0.007* 2*<br />

Aminoguanidine, Hemisulfate 54500 526 250<br />

-Amino-2-hydroxyguanidine,<br />

p-Toluensulfate<br />

55200 68<br />

Bromocriptine Mesylate 203850 > 00 0<br />

Dexamethasone 265005 0.005<br />

N G ,N G -Dimethyl-L-arginine,<br />

Dihydrochloride<br />

N G ,N G ’-Dimethyl-L-arginine,<br />

Dihydrochloride<br />

3 203<br />

3 204<br />

Diphenyleneiodonium Chloride 300260 0. 8 0.05<br />

2-Ethyl-2-thiopseudourea,<br />

Hydrobromide<br />

34 80 0.036 † 0.0 7 † 0.029 †<br />

Haloperidol 37 980 3 †<br />

L-N 5 -( -Iminoethyl)ornithine,<br />

Dihydrochloride<br />

MEG, Hydrochloride 444600<br />

400600 0.5 2.2 3.9<br />

S-Methylisothiourea Sulfate (SMT) 466220 2.0 ‡<br />

S-Methyl-L-thiocitrulline,<br />

Dihydrochloride<br />

N G -Monoethyl-L-arginine,<br />

Monoacetate Salt<br />

472804 5.4 34 0.3<br />

475883 8<br />

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Ca 2+ /CaM<br />

Product Cat. No. eNOS iNOS bNOS<br />

N G -Monomethyl-D-arginine,<br />

Monoacetate Salt<br />

N G -Monomethyl-L-arginine,<br />

Monoacetate (L-NMMA)<br />

N G -Nitro-L-arginine Methyl Ester,<br />

Hydrochloride<br />

475892<br />

475886 0.7 3.9 0.65<br />

483 25 0.5<br />

L-NIL, Dihydrochloride 482 00 3.3 92<br />

N G -Nitro-L-arginine (L-NNA) 483 20 0.09 † 8. † 0.025 †<br />

7-Nitroindazole 483400 0.8 20 0.7<br />

7-Nitroindazole, Sodium Salt 484500<br />

7-Nitroindazole, 3-Bromo- 2039 0.29 0.86 0. 7<br />

7-Nitroindazole, 3-Bromo-, Sodium Salt 2039 2<br />

Abbreviations: bNOS: brain nitric oxide synthase; eNOS: endothelial nitric oxide synthase; iNOS: inducible nitric oxide synthase.<br />

Note: *: K d ; †:K i ; ‡: EC 50<br />

nNOS <strong>Inhibitor</strong> I 490070 3 4 † 39 † 0. 2 †<br />

,3-PBITU, Dihydrobromide 5 2774 9 † 0.047 † 0.25 †<br />

L-Thiocitrulline, Dihydrochloride 5894 3.6 † 0.06 †<br />

N G -Propyl-L-arginine 537200 8.5 80 0.057<br />

SKF-525A, Hydrochloride 567300 90<br />

TRIM 643500 > 000 27 28.2<br />

Technical Support<br />

Phone 800 628 8470<br />

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09


Nitric Oxide/Oxidative Stress<br />

Nitric Oxide Synthase (NOS) <strong>Inhibitor</strong>s<br />

Product Cat. No. Comments Size Price<br />

400W 100050 [N-(3-Aminomethyl)benzylacetamidine, 2HCl]<br />

A cell-permeable, selective, irreversible, slow, tight binding inhibitor of<br />

iNOS (K d = 7 nM) both in vitro and in vivo.<br />

400W, Immobilized 100051 An immobilized form of the iNOS inhibitor (Cat. No. 00050) covalently<br />

attached to hydrophilic acrylic beads via an 8-carbon spacer. Useful to<br />

affinity-precipitate NOS and other functionally related proteins from<br />

cell lysates and tissue extracts.<br />

Aminoguanidine, Hemisulfate 154500 An irreversible inhibitor of both constitutive (IC 50 = 526 mM) and<br />

inducible (IC 50 = 250 mM) NOS activity in homogenates of rat ileal and<br />

colonic tissue.<br />

-Amino-2-hydroxyguanidine,<br />

p-Toluenesulfonate<br />

155200 A potent, cell-permeable, inhibitor of iNOS in murine macrophages (IC 50<br />

= 68 mM) and rat aortic smooth muscle cells (RASM) in culture (IC 50 =<br />

4 mM).<br />

Bromocriptine Mesylate 203850 (BCT; BRC; 2-Bromo-a-ergocryptine, Methanesulfonate)<br />

Selectively inhibits neuronal NOS (nNOS; IC 50 = 0 mM) by affecting the<br />

activation of NOS by calmodulin. Has only a weak inhibitory effect on<br />

inducible NOS (iNOS; IC 50 > 00 mM).<br />

Chlorpromazine, Hydrochloride 215921 {2-Chloro-10-[3´-(dimethylamino)propyl]phenothiazine, HCl}<br />

Inhibits NOS in mouse brain.<br />

Dexamethasone 265005 (9a-Fluoro-16a-methylprednisolone)<br />

Inhibits the expression of inducible, but not constitutive NOS in<br />

vascular endothelial cells (IC 50 = 5 nM).<br />

N G ,N G -Dimethyl-L-arginine,<br />

Dihydrochloride<br />

N G ,N G´ -Dimethyl-L-arginine,<br />

Dihydrochloride<br />

Diphenyleneiodonium Chloride 300260 (DPI)<br />

2-Ethyl-2-thiopseudourea,<br />

Hydrobromide<br />

311203 (ADMA, 2HCl)<br />

A cell-permeable, reversible inhibitor of NOS in vitro (IC 50 = 2-3 mM)<br />

and in vivo.<br />

311204 (SDMA, 2HCl)<br />

A cell-permeable and endogenous reversible inhibitor of nitric oxide<br />

synthesis in vitro and in vivo.<br />

An irreversible, cell-permeable, inhibitor of eNOS (IC 50 = 5 nM in<br />

macrophages).<br />

341180 (S-Ethyl-ITU, HBr; S-Ethylisothiourea, HBr)<br />

A highly potent, cell-permeable, competitive inhibitor of human<br />

inducible (K i = 7 nM), endothelial (K i = 36 nM), and neuronal<br />

(K i =29 nM) NOS isozymes.<br />

5 mg $ 00<br />

set $ 32<br />

00 mg $37<br />

0 mg $98<br />

25 mg $48<br />

500 mg $57<br />

00 mg $62<br />

25 mg $ 00<br />

25 mg $60<br />

0 mg $62<br />

00 mg $34<br />

Haloperidol 371980 Acts as a non-competitive inhibitor of porcine bNOS activity (K i = 3 mM). 00 mg $27<br />

L-N 5 -( -Iminoethyl)ornithine,<br />

Dihydrochloride<br />

400600 (L-NIO, 2HCl)<br />

A potent, cell-permeable, inhibitor of eNOS (IC 50 = 500 nM).<br />

MEG, Hydrochloride 444600 (Mercaptoethylguanidine, HCl)<br />

A cell-permeable inhibitor of iNOS and a peroxynitrite scavenger.<br />

Melatonin 444300 (N-Acetyl-5-methoxytryptamine; 5-Methoxy-N-acetyltryptamine)<br />

Inhibits rat cerebellar NOS. Also acts as a peroxynitrite scavenger.<br />

S-Methyl-L-thiocitrulline,<br />

Dihydrochloride<br />

472804 [N d -(S-Methyl)isothioureido-L-ornithine]<br />

A cell-permeable, inhibitor of NOS that exhibits about 7-fold greater<br />

selectivity for rat nNOS (IC 50 = 300 nM) compared to the eNOS (IC 50 =<br />

5.4 mM).<br />

S-Methylisothiourea, Sulfate 466220 (2-Methyl-2-thiopseudourea, Sulfate; SMT)<br />

A cell-permeable, highly selective inhibitor of iNOS. Reported to be<br />

0–30 fold more potent than L-NMMA (Cat. No. 475886) as an inhibitor<br />

of iNOS in immunostimulated cultured macrophages (EC 50 = 6 mM) and<br />

vascular smooth muscle cells (EC 50 = 2 mM).<br />

N G -Monoethyl-L-arginine,<br />

Monoacetate Salt<br />

N G -Monomethyl-D-arginine,<br />

Monoacetate Salt<br />

475883 (NMEA, AcOH)<br />

A cell-permeable inhibitor of nitric oxide synthase (NOS) (K i = 8 mM<br />

for iNOS; K i = 66 mM for cNOS).<br />

475892 (N G -Me-D-Arg, AcOH; N w -Me-D-Arg; D-NMMA)<br />

A cell-permeable, negative control for N G -Monomethyl-L-arginine (Cat.<br />

No. 475886). May be used to investigate non-specific L-NMMA activity.<br />

Does not have any significant effect on nitric oxide synthase.<br />

20 mg $92<br />

0 mg $7<br />

g $45<br />

0 mg $ 22<br />

00 mg $38<br />

0 mg $48<br />

0 Orders Phone 800 854 34 7<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Fax 800 776 0999<br />

Web www.emdbiosciences.com/calbiochem<br />

0 mg<br />

25 mg<br />

00 mg<br />

$49<br />

$95<br />

$2 0


Nitric Oxide Synthase (NOS) <strong>Inhibitor</strong>s, continued<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Nitric Oxide/Oxidative Stress<br />

Product Cat. No. Comments Size Price<br />

N G -Monomethyl-L-arginine,<br />

Monoacetate Salt<br />

475886 (N w -Me-L-Arg; N G -Me-L-Arg, AcOH; L-NMMA)<br />

A cell-permeable, L-arginine analog that acts as a competitive inhibitor<br />

of all three isoforms of NOS (IC 50 = 650 nM for nNOS; IC 50 = 700 nM for<br />

eNOS; IC 50 = 3.9 mM for iNOS).<br />

L-NIL, Dihydrochloride 482100 [L-N 6 -(1-Iminoethyl)lysine, DiHCl]<br />

A potent, cell-permeable, and selective NOS inhibitor that exhibits<br />

greater selectivity for iNOS (IC 50 = 3.3 mM) compared to nNOS (IC 50 =<br />

92 mM).<br />

nNOS <strong>Inhibitor</strong> I 490070 {(4S)-N-(4-Amino-5[aminoethyl]aminopentyl)-N´-nitroguanidine, TFA}<br />

A potent, cell-permeable, and highly selective inhibitor of nNOS (K i =<br />

20 nM). Displays >2500-fold and 92-fold selectivity over eNOS and<br />

iNOS, respectively.<br />

N G -Nitro-L-arginine 483120 (L-NNA; N G -NO 2 -L-Arg)<br />

A potent, cell-permeable, reversible inhibitor of bNOS (K i = 25 nM) and<br />

eNOS (K i = 90 nM).<br />

N G -Nitro-L-arginine Methyl Ester,<br />

Hydrochloride<br />

483125 (L-NAME, HCl; N w -NO 2 -L-Arg-OMe; N G -NO 2 -L-Arg-OMe)<br />

A cell-permeable, more soluble analog of arginine and a competitive,<br />

slowly reversible inhibitor of eNOS (IC 50 = 500 nM).<br />

p-Nitroblue Tetrazolium Chloride 484235 (NBT; Nitro BT)<br />

NADPH-diaphorase substrate that competitively inhibits NOS<br />

(IC 50 = 3–4 mM).<br />

7-Nitroindazole 483400 (7-Ni)<br />

7-Nitroindazole, Sodium Salt 484500 (7-NiNa)<br />

7-Nitroindazole, 3-Bromo-,<br />

Sodium Salt<br />

A cell-permeable, reversible and competitive inhibitor of nitric oxide<br />

synthase (NOS) with high selectivity for the bNOS (IC 50 = 7 0 nM). Also<br />

inhibits bovine eNOS (IC 50 = 800 nM). Binds to the heme group of NOS.<br />

A more soluble form of 7-Nitroindazole (Cat. No. 483400). Its solubility<br />

in artificial cerebrospinal fluid permits its use as an inhibitor of NOS in<br />

brain tissue.<br />

203912 (BrNINa)<br />

Sodium salt of 3-Bromo-7-Nitroindazole (Cat. No. 2039 ) that is more<br />

soluble in aqueous solutions and still penetrates the brain.<br />

,3-PBITU, Dihydrobromide 512774 [S,S´-1,3-Phenylene-bis(1,2-ethanediyl)-bis-isothiourea, 2HBr]<br />

A highly potent, cell-permeable, competitive inhibitor of human nitric<br />

oxide synthase. Exhibits approximately 200 fold higher selectivity for<br />

iNOS (K i = 47 nM) compared to eNOS (K i = 9.0 mM).<br />

PPM- 8 529570 (2-Benzoylamino-1,4-naphthoquinone)<br />

A novel, cell-permeable, anti-inflammatory agent that inhibits the<br />

expression of inducible nitric oxide synthase (iNOS; IC 50 ~5 mM).<br />

Acts by blocking the activation of NF-kB in vitro and in vivo.<br />

N G -Propyl-L-arginine 537200 (N-PLA; N w -Propyl-L-arginine)<br />

A potent, cell-permeable, competitive, and time-dependent inhibitor<br />

of nNOS (K i = 57 nM for nNOS; K i = 80 mM for iNOS; K i = 8.5 mM for<br />

eNOS).<br />

-Pyrrolidinecarbodithioic Acid,<br />

Ammonium Salt<br />

548000 (Ammonium Pyrrolidinedithiocarbamate; APDC; PDTC, NH 4 )<br />

A cell-permeable inhibitor of inducible NOS inhibits the induction of<br />

nitric oxide synthase activity in rat alveolar macrophages.<br />

SKF-525A, Hydrochloride 567300 (Proadifen)<br />

A cell-permeable inhibitor of neuronal nitric oxide synthase<br />

(IC = 90 mM).<br />

50<br />

L-Thiocitrulline, Dihydrochloride 589411 (2-Thioureido-L-norvaline)<br />

A potent, cell-permeable, inhibitor of nNOS (K i = 60 nM) compared to<br />

iNOS (K i = 3.6 mM).<br />

TRIM 643500 [1-(2-Trifluoromethylphenyl)imidazole]<br />

A potent, cell-permeable, inhibitor of nNOS (IC 50 = 28.2 mM) and iNOS<br />

(IC 50 = 27.0 mM), however, it is only a weak inhibitor of eNOS<br />

(IC 50 = .06 mM).<br />

25 mg<br />

50 mg<br />

00 mg<br />

$65<br />

$ 4<br />

$2 0<br />

0 mg $ 7<br />

mg<br />

5 mg<br />

$70<br />

$2<br />

00 mg $33<br />

00 mg $33<br />

250 mg<br />

g<br />

$37<br />

$ 29<br />

00 mg $83<br />

0 mg $48<br />

0 mg $98<br />

50 mg $8<br />

0 mg $98<br />

5 mg $75<br />

00 mg $34<br />

g $2 5<br />

0 mg $ 07<br />

00 mg $48<br />

Technical Support<br />

Phone 800 628 8470<br />

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Nitric Oxide/Oxidative Stress<br />

Nitric Oxide Synthase, Inducible, <strong>Inhibitor</strong> Set<br />

(iNOS <strong>Inhibitor</strong> Set)<br />

Provided as a 5 vial set. Each set contains 5 mg of 400W (Cat. No.<br />

00050); 0 mg of -Amino-2-hydroxyguanidine, p-Toluenesulfonate<br />

(Cat. No. 55200); 00 mg of S-Methylisothiourea Sulfate (Cat. No.<br />

466220); 0 mg of L-NIL, Dihydrochloride (Cat. No. 482 00); and 50 mg<br />

of ,3-PBITU, Dihydrobromide (Cat. No. 5 2774).<br />

Cat. No. 482760 1 set $340<br />

Related Products<br />

Nitric Oxide Assay Kit, Colorimetric<br />

Assay kit for the rapid quantitative measurement of total nitric oxide<br />

(NO). Based on the enzymatic conversion of nitrate to nitrite by nitrate<br />

reductase, followed by the spectrophotometric quantitation of nitrite<br />

levels using Griess Reagent. Do not use with nitrate- or nitritecontaining<br />

tissue culture media such as RPMI. kit = 50 tests.<br />

Cat. No. 482650 1 kit $286<br />

Nitric Oxide Assay Kit, Fluorometric<br />

Assay kit useful for the rapid quantitative measurement of nitric oxide<br />

(NO). Displays 50-fold increased sensitivity over the colorimetric nitric<br />

oxide assay kit (Cat. No. 482650). The assay is based on the enzymatic<br />

conversion of nitrate to nitrite by nitrate reductase, followed by the<br />

addition of 2,3-diaminonapthalene (DAN), and NaOH, which converts<br />

nitrite to a fluorescent compound. Fluorescence measurements of<br />

- this compound accurately determine the nitrite (NO ) concentration<br />

2<br />

(excitation max.: 365 nm; emission max.: 450 nm). Do not use with<br />

nitrate- or nitrite-containing tissue culture media such as RPMI.<br />

kit = 80 tests.<br />

Cat. No. 482655 1 kit $286<br />

NOS <strong>Inhibitor</strong> Set<br />

Contains 20 mg of L-N 5 -( -Iminoethyl)ornithine, HCl (Cat. No.<br />

400600), 0 mg of S-Methyl-L-thiocitrulline, HCl (Cat. No. 472804),<br />

25 mg of N G -Monomethyl-L-arginine, Monoacetate Salt (Cat. No.<br />

475886), 00 mg of N G -Nitro-L-arginine Methyl Ester, HCl (Cat. No.<br />

483 25), 00 mg of N G -Nitro-D-arginine Methyl Ester, HCl, 00 mg of<br />

7-Nitroindazole (Cat. No. 483400), and 0 mg of L-Thiocitrulline, HCl<br />

(Cat. No. 5894 ).<br />

Cat. No. 490075 1 set $380<br />

Nitric Oxide Synthase Assay Kit<br />

Assay kit useful for the rapid quantitative measurement of nitric oxide<br />

synthase (NOS) activity. It is based on the conversion of radioactive<br />

L-arginine to L-citrulline by NOS. Radioactive citrulline is separated<br />

from unreacted arginine on a cation-exchange resin and quantitated.<br />

kit = 50 tests.<br />

Cat. No. 482700 1 kit $329<br />

Nitric Oxide Synthase Assay Kit, Colorimetric<br />

Assay kit useful for the rapid and accurate measurement of nitric<br />

oxide synthase (NOS) activity. This colorimetric assay uses lactate<br />

dehydrogenase (LDH) to destroy excess NADPH (cofactor for NOS)<br />

which interferes with the chemistry of Griess Reagent, commonly used<br />

for nitrite/nitrate detection. Do not use with nitrate- or nitritecontaining<br />

tissue culture media such as RPMI. kit = 96 tests.<br />

Cat. No. 482702 1 kit $286<br />

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Proteases<br />

Anthrax Lethal Factor (LF) Metalloprotease <strong>Inhibitor</strong>s<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Proteases<br />

Product Cat. No. Comments Size Price<br />

Anthrax Lethal Factor Protease 176901 [Anthrax LF Protease <strong>Inhibitor</strong>; Bacillus anthracis LF Protease <strong>Inhibitor</strong>;<br />

mg $ 95<br />

<strong>Inhibitor</strong>, In-2-LF<br />

In-2-LF]<br />

N Anthrax Lethal Factor Protease<br />

<strong>Inhibitor</strong> III<br />

More online... www.calbiochem.com/inhibitors/ALF<br />

A cell-permeable N-acetylated, C-hydroxamate derivative of a 4-mer<br />

peptide designed from the MEK-2 template that acts as a competitive<br />

inhibitor of anthrax lethal factor (LF) metalloprotease (K = nM).<br />

i<br />

Also inhibits MEK-3 cleavage. Protects against anthrax toxin induced<br />

cytotoxicity in RAW264.7 and J772.A cells.<br />

176910 [BI-11B3; 5-(5-(2-Chloro-5-trifluoromethyl-phenyl)-furan-2ylmethylene)-4-oxo-2-thioxo-thiazolidin-3-yl)-acetic<br />

acid]<br />

A cell-permeable, rhodanine-acetic acid analog that chelates the<br />

active site Zn2+ and acts as a potent inhibitor of anthrax lethal factor<br />

(LF) metalloproteinase (K = 32 nM). Exhibits only minimal inhibition of<br />

i<br />

MMP-2 and MMP-9. Shown to effectively prevent LF-induced MAPKK<br />

proteolysis (< 2 mM) and offer protection against LF and protective<br />

antigen (PA) cytotoxic effects in RAW264.7 cells (IC < 5 mM). In<br />

50<br />

combination with the antibiotic ciprofloxacin, doubly enhances the<br />

survival rates of mice challenged with anthrax spores.<br />

5 mg $ 29<br />

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Phone 800 628 8470<br />

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3


Proteases<br />

Calpain <strong>Inhibitor</strong>s<br />

Calpains belong to a family of calcium-dependent thiolproteases<br />

that proteolyze a wide variety of cytoskeletal,<br />

membrane-associated, and regulatory proteins. Fifteen<br />

gene products of the calpain family are reported in<br />

mammals, which are classified as nine typical and six<br />

atypical calpains. Typical calpains are characterized<br />

by a C-terminal Ca 2+ -binding domain that includes EFhand<br />

motifs, while atypical calpains lack this region,<br />

but often contain additional domains. Calpains do not<br />

generally function as destructive proteases, but act as<br />

calcium-dependent modulators that remove limited<br />

portions of protein substrates. Calpains respond to<br />

Ca 2+ signals by cleaving specific proteins, frequently<br />

components of signaling cascades, thereby irreversibly<br />

modifying their function. Two major isoforms of calpain<br />

are reported in mammals, calpain-1 (m-form) and<br />

calpain-2 (m-form). They are constitutively expressed<br />

in all tissues and differ in their calcium requirement<br />

for activation (~50 mM for calpain-1 and ~500 mM for<br />

calpain-2) and contain several calcium-binding sites,<br />

which allosterically affect the enzyme activity.<br />

Calpain-1 and -2 exhibit about 55-65% sequence<br />

homology and are composed of an 80 kDa and a 30 kDa<br />

subunit. The 80 kDa subunit has the catalytic site and<br />

is unique to each isozyme, whereas the 30 kDa unit is<br />

the regulatory subunit and is common to both calpain-<br />

1 and -2. The 80 kDa subunit consists of four domains<br />

(I-IV) and the 30 kDa unit has 2 domains (V and VI).<br />

Domain I is partially removed during autolysis. Domain<br />

II is the protease domain, which is structurally similar<br />

to the catalytic domain of other cysteine proteases. It<br />

contains a Cys-His-Asn triad characteristic of cysteine<br />

proteases. Domain III exhibits a homology with typical<br />

calmodulin binding proteins and interacts with calcium<br />

binding domains (IV and VI) and frees domain II for<br />

protease activity. Domain IV is a Ca 2+ -binding domain<br />

structurally similar to calmodulin. Domain V contains<br />

a hydrophobic region and is essential for calpain<br />

interaction with membranes. Domain VI has five EFhands.<br />

There are two EF-hand pairs, one pair (EF1-EF2)<br />

displays an ‘open’ conformation and the other (EF3-EF4)<br />

a ‘closed’ conformation. The fifth EF-hand (EF5) is in a<br />

‘closed’ conformation. Both, calpain-1 and -2 associate<br />

non-covalently with domain V and domain VI. Several<br />

putative substrates of calpain-1 and -2 are known<br />

that are cleaved by both isoforms, but with different<br />

efficiencies. Recently, determinants for calpain-1 and<br />

-2 have been analyzed and it is shown that amino acid<br />

preferences extend over 11 residues around the scissile<br />

bond. Calpains prefer Leu, Thr, Val in the P2 position,<br />

Lys, Tyr, Arg in the P1 position, and proline in the region<br />

flanking the P2 - P’1 segment.<br />

Calpain-3, another typical calpain was first described<br />

as a skeletal muscle-specific calpain isoform. However,<br />

subsequent studies have shown its presence in several<br />

other tissues. It is a 94 kDa enzyme that contains<br />

821 amino acids. Structurally calpain-3 is similar<br />

to calpain-1 and -2, however, it has an additional Nterminal<br />

sequence of 20-30 amino acids (NS). Also, its<br />

domain I exhibits less than 20% homology to calpain-1<br />

and -2. Calpain-3 includes two characteristic amino<br />

acid stretches: one between the catalytic cysteine<br />

and histidine (IS1) and the other (IS2) upstream of the<br />

first EF hand motif of calcium-binding domain IV.<br />

A characteristic feature of calpain 3 is that it is not<br />

inhibited by calpastatin. While conventional calpains<br />

localize mainly in the cytosol or at the inner face of<br />

the plasma membrane, calpain-3 is detected within the<br />

nuclei of skeletal muscle cells and in the N2 region of<br />

myofibrils.<br />

More recently, attention has been focused on the<br />

pathological significance of calcium accumulation in<br />

the central nervous system following cerebral ischemia<br />

and traumatic brain injury. Overactivation of NMDA,<br />

kainate, and AMPA receptors in the brain leads to<br />

sustained influx of Ca 2+ through the voltage-gated<br />

calcium channels. Disturbances in calcium homeostasis<br />

result in the activation of several calcium-dependent<br />

enzymes including calpains. Overexpression of calpains<br />

has been positively linked to both acute and chronic<br />

neurodegenerative processes including ischemia,<br />

trauma, and Alzheimer’s disease. In Alzheimer’s disease<br />

4 Orders Phone 800 854 34 7<br />

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the ratio of active (76 kDa) to inactive (80 kDa) calpain-<br />

1 is reported to be much higher than normal. Calpain<br />

proteolysis is usually the late-stage common pathway<br />

towards cell death induced by excitotoxic compounds;<br />

hence, a selective inhibition of calpains to limit neuronal<br />

damage appears to be a viable therapeutic measure.<br />

However, most of the inhibitors reported are active site<br />

targeted peptides and their limited cell permeability<br />

poses problems. PD 150606 (Cat. No. 513022), a cellpermeable<br />

inhibitor for calpains, may serve as a useful<br />

tool for these studies.<br />

Calpain <strong>Inhibitor</strong>s<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Proteases<br />

Product Cat. No. Comments Size Price<br />

ALLM 208721 (Calpain <strong>Inhibitor</strong> II)<br />

A cell-permeable inhibitor of calpain I (K i = 20 nM), calpain II (K i =<br />

230 nM), cathepsin B (K i = 00 nM), and cathepsin L (K i = 600 pM).<br />

ALLN 208719 (Calpain <strong>Inhibitor</strong> I; LLNL; MG 101)<br />

A cell-permeable inhibitor of calpain I (K i = 90 nM), calpain II (K i =<br />

220 nM), cathepsin B (K i = 50 nM), and cathepsin K (K i = 500 pM).<br />

InSolution ALLN 208750 (Calpain <strong>Inhibitor</strong> I; LLNL; MG 101)<br />

A 0 mM (5 mg / .3 ml) solution of ALLN (Cat. No. 2087 9) in DMSO.<br />

Calpain <strong>Inhibitor</strong> III 208722 (Carbobenzoxy-valinyl-phenylalaninal; MDL 28170)<br />

A potent, cell-permeable inhibitor of calpain I and II (K i = 8 nM).<br />

Calpain <strong>Inhibitor</strong> IV 208724 (Z-LLY-FMK)<br />

A potent, cell-permeable, and irreversible inhibitor of calpain II<br />

(k 2 = 28,900 M - s - ).<br />

Calpain <strong>Inhibitor</strong> V 208726 (Mu-Val-HPh-FMK)<br />

A potent, non-selective, cell-permeable, and irreversible inhibitor of<br />

calpain (~ 00 mM).<br />

Calpain <strong>Inhibitor</strong> VI 208745 [N-(4-Fluorophenylsulfonyl)-L-valyl-L-leucinal; SJA6017]<br />

A cell-permeable, potent, and reversible inhibitor of calpain I<br />

(IC = 7.5 nM) and calpain II (IC = 78 nM).<br />

50 50<br />

Calpain <strong>Inhibitor</strong> X 208742 (Z-L-Abu-CONH-ethyl)<br />

A cell-permeable, potent, reversible, active site inhibitor of calpain I<br />

and calpain II (K ~250 nM).<br />

i<br />

Calpain <strong>Inhibitor</strong> XI 208743 [Z-L-Abu-CONH(CH ) -morpholine]<br />

2 3<br />

A cell-permeable, potent, highly selective, reversible, active site<br />

inhibitor of calpain I (K = 40 nM) and calpain II (K = 4 nM).<br />

i i<br />

Calpain <strong>Inhibitor</strong> XII 208744 (Z-L-Nva-CONH-CH -2-Py)<br />

2<br />

A cell-permeable, potent, highly selective, reversible, active site<br />

inhibitor of calpain I (K = 9 nM) and calpain II (K = 20 nM).<br />

i i<br />

Calpastatin, Human,<br />

Recombinant, Domain I<br />

208900 An endogenous protease inhibitor that acts specifically on calpain<br />

I. Has greater inhibitory action compared to ALLM and ALLN. Not<br />

available for sale in Japan.<br />

Calpastatin Peptide 208902 (CS Peptide)<br />

A cell-permeable and potent inhibitor of calpain I and calpain II<br />

(IC = 20 nM for purified rabbit calpain II).<br />

50<br />

Calpastatin Peptide, Negative<br />

Control<br />

References:<br />

Bartoli, M., and Richard, I. 2005. Int. J. Biochem. Cell Biol. 37, 2 5.<br />

Tompa, P., et al. 2004. J. Biol. Chem. 279, 20775.<br />

Goll, D.E., et al. 2003. Physiol. Rev. 83, 73<br />

Nakajima, T., et al. 200 . Biochim. Biophys. Acta 1519, 55.<br />

Kinbara, K., et al. 998. Biochem. Pharmacol. 56, 4 5.<br />

Kampfl, A., et al. 997. J. Neurotrauma 14, 2 .<br />

Kinbara, K., et al. 997. Arch. Biochem. Biophys. 342, 99.<br />

Johnson, G.V.W., and Guttmann, R.P. 997. BioEssays 19, 0 .<br />

Sorimachi, H., et al., 997. Biochem. J. 328, 72 .<br />

Bartus, R.T., et al. 995. Neurol. Res. 17, 249.<br />

Saito, K., et al. 993. Proc. Natl. Acad. Sci. USA 90, 2628.<br />

More online... www.calbiochem.com/inhibitors/calpain<br />

208904 A scrambled peptide with an identical amino acid composition to that<br />

of Calpastatin Peptide (Cat. No. 208902). Useful as a negative control<br />

for Calpastatin Peptide.<br />

Calpastatin, Human Erythrocytes 208901 Tetrameric protein that is a specific, endogenous inhibitor of the<br />

calcium-activated neutral proteinases. It is upregulated in response to<br />

hypoxia and may have a protective role in minimizing hypoxic damage.<br />

Calpeptin 03-34-0051 (Benzyloxycarbonylleucyl-norleucinal)<br />

A cell-permeable calpain inhibitor. Inactivates calpain I (ID 50 = 52 nM),<br />

calpain II (ID 50 = 34 nM), and papain (ID 50 = 38 nM).<br />

25 mg $ 70<br />

5 mg<br />

25 mg<br />

$48<br />

$ 72<br />

5 mg $63<br />

25 mg $ 9<br />

mg $ 90<br />

mg $ 90<br />

mg<br />

5 mg<br />

mg<br />

5 mg<br />

mg<br />

5 mg<br />

mg<br />

5 mg<br />

mg<br />

3 mg<br />

$50<br />

$ 79<br />

$84<br />

$288<br />

$84<br />

$288<br />

$84<br />

$288<br />

$ 78<br />

$446<br />

500 mg $ 44<br />

500 mg $ 30<br />

00 mg $ 92<br />

5 mg<br />

25 mg<br />

00 mg<br />

$70<br />

$ 97<br />

$573<br />

Technical Support<br />

Phone 800 628 8470<br />

E-mail calbiochem@emdbiosciences.com<br />

5


Proteases<br />

Calpain <strong>Inhibitor</strong>s, continued<br />

Product Cat. No. Comments Size Price<br />

EST 330005 [E-64d; (2S,3S)-trans-Epoxysuccinyl-L-leucylamido-3-methylbutane Ethyl<br />

Ester; Loxistatin]<br />

A cell-permeable, irreversible inhibitor of cysteine proteases that is<br />

reported to block the action of calpain I. Its action is similar to E-64<br />

(Cat. No. 324890); however, it is devoid of charged groups.<br />

mg $96<br />

PD 45305 513021 A useful negative control for the calpain inhibitors PD 50606<br />

(Cat. No. 5 3022) and PD 5 746 (Cat. No. 5 3024).<br />

mg $99<br />

5 mg $94<br />

PD 50606 513022 [3-(4-Iodophenyl)-2-mercapto-(Z)-2-propenoic Acid]<br />

A cell-permeable, selective non-peptide calpain inhibitor (K i = 2 0 nM<br />

for calpain I and 370 nM for calpain II) directed towards the calcium<br />

binding sites of calpain.<br />

PD 5 746 513024 [3-(5-Fluoro-3-indolyl)-2-mercapto-(Z)-2-propenoic Acid]<br />

A cell-permeable, non-peptidic, and highly selective calpain inhibitor<br />

that displays over 20-fold greater selectivity for calpain I (K = 260 nM)<br />

i<br />

over calpain II (K = 5.33 mM).<br />

i<br />

Calpain <strong>Inhibitor</strong> Set 208733 Provided as a 5 vial set. Each set contains 5 mg ALLN (Cat. No. 2087 9);<br />

25 mg Calpain <strong>Inhibitor</strong> III (Cat. No. 208722); 5 mg of Calpeptin (Cat.<br />

No. 03-34-005 ); mg of EST (Cat. No. 330005); and 5 mg of PD<br />

50606 (Cat. No. 5 3022).<br />

Related Products<br />

Calpain-1 Substrate II, Fluorogenic<br />

An internally quenched peptide substrate that is optimized for calpainamino<br />

acid recognition motifs at the primed as well as the nonprimed<br />

sides.<br />

Cat. No. 208772 1 mg $180<br />

Calpain Substrate III, Fluorogenic<br />

A fluorogenic FRET peptide with a substrate sequence that is optimized<br />

for calpain- and -2 (Cat. Nos. 2087 2, 2087 3, 2087 5, and 2087 8)<br />

based on 06 known cleavage sites. It is cleaved by mammalian<br />

calpains with a much better efficacy (k cat /K mx 0 -2 M - s - ) = 69.8,<br />

38.5, 20.0, 6.8 , 3.58, 0.05, and < 0.05 for calpain-2, trypsin, papain,<br />

calpain-B, calpain-A, chymotrypsin, and cathepsin-B, respectively)<br />

and kinetically superior to other commonly used calpain substrates,<br />

such as LY-AMC (Cat. No. 20873 ) and a-spectrin cleavage site-based<br />

substrate (Cat. No. 208748). Has been used successfully in monitoring<br />

calpain activity in whole Drosophila S2 cells (cellular incorporation<br />

achieved with a lipofection reagent) and in COS-7 cell lysate.<br />

Purity: ≥98% by HPLC.<br />

Cat. No. 208771 1 mg $195<br />

Calpain Activity Assay Kit, Fluorogenic<br />

Assay kit useful for the quantitative determination of calpain- and<br />

calpain-2 activity in human cell lysates, plasma, and serum and for<br />

screening calpain inhibitors. Requires a fluorimeter or microplate<br />

reader capable of measuring fluorescence at wavelengths of<br />

Ex. max: ~360 nm and Em. max: ~460 nm.<br />

Cat. No. QIA120 1 kit $345<br />

Calpain Substrate II, Fluorogenic<br />

Cyclic fluorogenic substrate for the quantitative determination of<br />

calpain - and -2. Also suitable for measuring the peptidase activity of<br />

the 20S proteasome. Typical concentrations range from 0– 00 µM,<br />

depending on assay conditions. Purity: ≥95% by TLC. Ex. max.: ~380 nm,<br />

Em. max.: ~460 nm.<br />

Cat. No. 208731 25 mg $75<br />

Calpain-1 Substrate, Fluorogenic<br />

2 mg $ 69<br />

set $325<br />

An internally quenched fluorogenic substrate peptide derived from the<br />

calpain- cleavage site of a-spectrin. It is not recognized by trypsin<br />

or a-chymotrypsin and serves as a sensitive and specific substrate for<br />

calpain- (K m = 4.6 µM; k cat = s - ). Cleavage occurs between Tyr-Gly<br />

residues and results in enhanced fluorescence. Purity: ≥95% by HPLC.<br />

Ex. max.: ~490 nm, Em. max.: ~518 nm.<br />

Cat. No. 208748 2 mg $163<br />

View more than 20 anti-calpain<br />

antibodies at our updated<br />

Antibody Resource<br />

www.calbiochem.com/<br />

antibodyresource<br />

6 Orders Phone 800 854 34 7<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

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Collagenase <strong>Inhibitor</strong>s<br />

(Also see Matrix Metalloproteinase <strong>Inhibitor</strong>s)<br />

Mammalian collagenases belong to the family of<br />

metalloproteinases that specifically cleave collagen.<br />

On a dry weight basis, collagen constitutes over 70%<br />

of skin weight. Collagenases have a unique ability to<br />

degrade native collagen that is normally resistant to<br />

breakdown by other proteases. They catalyze a single<br />

proteolytic cleavage in the helical collagen chains,<br />

resulting in two fragments that are subsequently<br />

accessible to less specific proteases. Collagenases are<br />

produced by macrophages, fibroblasts, and keratinocytes<br />

that are involved in the wound-healing process. In<br />

normal healthy subjects, even during wound healing,<br />

the activity of endogenous collagenases is low and is<br />

Collagenase <strong>Inhibitor</strong>s<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Proteases<br />

sufficient for the removal of dead tissue. However, in<br />

patients with chronic non-healing wounds and ulcers,<br />

there may be impairment of endogenous collagenase<br />

production leading to insufficient removal of dead<br />

tissue. Such conditions warrant the application of<br />

bacterial collagenases to clean the wound and begin the<br />

healing process. Collagenases also play an important<br />

role in separating cells from their anchors. They dissolve<br />

desmosomes and thereby enable cells to migrate on a<br />

matrix of fibronectin. Fibroblast migration also requires<br />

these proteases to enable fibroblasts to move within the<br />

wound.<br />

Product Cat. No. Comments Size Price<br />

Collagenase <strong>Inhibitor</strong> I 234140 (Z-PDLDA-NHOH)<br />

A potent and specific inhibitor of vertebrate collagenases (IC 50 = mM).<br />

TAPI-0 579050 {N-(R)-[2-(Hydroxyaminocarbonyl)methyl]-4-methylpentanoyl-Lnaphthylalanyl-L-alanine<br />

Amide; TNF-a Protease <strong>Inhibitor</strong>-0}<br />

A hydroxymate-based inhibitor of collagenase, gelatinase, and TACE<br />

[TNF-a convertase; ADAM 7 (IC 50 = 00 nM)].<br />

TAPI- 579051 {N-(R)-[2-(Hydroxyaminocarbonyl)methyl]-4-methylpentanoyl-Lnaphthylalanyl-L-alanine,<br />

2-aminoethyl Amide; TNF-a Protease <strong>Inhibitor</strong>-1}<br />

A structural analog of TAPI-0 (Cat. No. 579050) with similar in vitro<br />

efficacy for the inhibition of MMPs and TACE.<br />

5 mg $55<br />

mg $262<br />

mg $262<br />

N InSolution TAPI- 579053 A 0 mM (500 mg/ 00 ml) solution of TAPI- (Cat. No. 57905 ) in DMSO. 500 mg $ 39<br />

Related Products<br />

Collagenase Substrate II<br />

An excellent substrate for a convenient, continuous spectrophotometric<br />

assay of collagenases. Change in absorption is monitored at ~304 nm.<br />

Purity: ≥98% by TLC.<br />

Cat. No. 234147 5 mg $65<br />

More online... www.calbiochem.com/inhibitors/collagenase<br />

Collagenase Substrate III, Fluorogenic<br />

A quenched-fluorescence substrate useful for measuring clostridial<br />

collagenase and Pz-peptidase (K m = 8.6 mM). It is not subject to<br />

interference by background fluorescence of tryptophan-containing<br />

proteins. Purity: ≥95% by HPLC. Ex. max.: ~345 nm, Em. max.: ~405 nm.<br />

Cat. No. 234164 5 mg $145<br />

Technical Support<br />

Phone 800 628 8470<br />

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7


Proteases<br />

Elastase <strong>Inhibitor</strong>s<br />

Elastases are serine proteases that hydrolyze amides and<br />

esters. They are distinctive in their action upon elastin.<br />

Because elastin is found in highest concentrations<br />

in the elastic fibers of connective tissues, elastase<br />

is frequently used to dissociate tissues that contain<br />

extensive intercellular fiber networks. For this purpose<br />

they are used in association with other enzymes such as<br />

collagenase, trypsin, and chymotrypsin.<br />

Elastase <strong>Inhibitor</strong>s<br />

Elastase is also found in blood components and this<br />

enzyme is identical to pancreatic elastase, but differs<br />

from the elastase of polymorphonuclear leukocytes. The<br />

leukocyte enzyme, which is inhibited by a 1 -antitrypsin<br />

but not by pancreatic trypsin inhibitor, is known to<br />

mediate pathological elastolysis during acute arthritis<br />

and pulmonary emphysema.<br />

Product Cat. No. Comments Size Price<br />

a -Antitrypsin, Human Plasma 178251 (a 1 -AT; 3.5S a 1 -Glycoprotein; a 1 -Proteinase <strong>Inhibitor</strong>)<br />

A serine protease inhibitor that also acts as a major physiological<br />

regulator of elastase.<br />

Caffeic Acid 205546 (3,4-Dihydroxycinnamic Acid)<br />

A cell-permeable inhibitor of neutrophil elastase (IC 50 = 93 mM). Also<br />

acts as a selective, non-competitive inhibitor of 5-lipoxygenase<br />

(ID 50 = 3.7 mM), glutathione S-transferases, and xanthine oxidase.<br />

Elastase <strong>Inhibitor</strong> I 324692 (Boc-AAA-NHO-Bz; PPE <strong>Inhibitor</strong>)<br />

A serine protease inhibitor that inhibits pancreatic elastase<br />

(K i = 28 M - sec - ) and thermitase.<br />

Elastase <strong>Inhibitor</strong> II 324744 (HNE <strong>Inhibitor</strong>; MeOSuc-AAPA-CMK; MSACK)<br />

A potent inhibitor of human neutrophil elastase (HNE) . The inhibition<br />

results from cross-linking of catalytic residues at His 57 and Ser 95 .<br />

Elastase <strong>Inhibitor</strong> III 324745 (HLE <strong>Inhibitor</strong>; MeOSuc-AAPV-CMK)<br />

A potent inhibitor of human leukocyte elastase (HLE) (K i = 0 mM).<br />

N Elastase <strong>Inhibitor</strong> IV 324759 [N-(2-(4-(2,2-Dimethylpropionyloxy)phenylsulfonylamino)benzoyl)aminoac<br />

etic acid; N-(o-(p-Pivaloyloxybenzene)sulfonylaminobenzoyl)glycine]<br />

Furin <strong>Inhibitor</strong>s<br />

Furin <strong>Inhibitor</strong>s<br />

More online... www.calbiochem.com/inhibitors/elastase<br />

A cell-permeable, potent, substrate-competitive, and highly specific<br />

inhibitor of neutrophil elastase (IC 50 = 9-49 nM. Displays > 00fold<br />

greater selectivity over pancreas elastase (IC 50 = 5.6 mM). Does<br />

not inhibit trypsin, thrombin, plasmin, kallikrein, chymotrypsin, and<br />

cathepsin G even at concentrations as high as 00 mM.<br />

8 Orders Phone 800 854 34 7<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Fax 800 776 0999<br />

Web www.emdbiosciences.com/calbiochem<br />

mg<br />

5 mg<br />

$74<br />

$287<br />

500 mg $48<br />

mg $92<br />

5 mg $98<br />

5 mg $ 04<br />

mg $68<br />

Product Cat. No. Comments Size Price<br />

Furin <strong>Inhibitor</strong> I 344930 (Decanoyl-RVKR-CMK)<br />

A peptidyl chloromethylketone that binds to the catalytic site of furin<br />

and blocks its activity. Hence, it can be used as a high specificity<br />

cleavage inhibitor of viral glycoproteins and blocker of viral replication.<br />

Reported to block the shedding of MT5-MMP by furin and prevent<br />

the activation of MT5-MMP. Also shown to reduce the pro-peptide<br />

cleavage of BACE (b-site APP-cleaving enzyme).<br />

mg $ 06<br />

Furin <strong>Inhibitor</strong> II 344931 [Hexa-D-arginine; H-(D)RRRRRR-NH ] 2<br />

A polyarginine compound that acts as a potent, specific, and competitive<br />

inhibitor of furin (K = 06 nM). Inhibits subtilisin-like proprotein<br />

i<br />

convertase 4 (PACE4) and prohormone convertase (PC ) at much higher<br />

concentration (K = 580 nM and 3 mM, respectively). Has a stimulatory<br />

i<br />

effect on the activity of prohormone convertase 2 (PC2). The D-peptides<br />

are suggested to be more resistant to in vivo hydrolysis than L-peptides.<br />

mg $87


Matrix Metalloproteinase (MMP) <strong>Inhibitor</strong>s<br />

The proteolytic degradation of the extracellular matrix<br />

(ECM) by tumor cells requires the action of highly<br />

specialized MMPs that are expressed in cell- or tissuespecific<br />

patterns. MMPs also play an important role<br />

in wound healing, angiogenesis, embryogenesis, and<br />

in pathological processes such as tumor invasion and<br />

metastasis. MMPs are characterized by the presence<br />

of a zinc ion in the active site, which is required for<br />

their catalytic activity. Thus far 28 different types<br />

of MMPs (secreted or transmembrane enzymes) have<br />

been identified and classified based on their protein<br />

domain structures derived from genomic data. Of these,<br />

23 MMPs have been found to be expressed in human<br />

tissues. Secreted MMPs include minimal-domain MMPs,<br />

simple hemopexin domain-containing MMPs, gelatinbinding<br />

MMPs, furin-activated MMPs, and vitronectinlike<br />

insert MMPs. The membrane-bound MMPs include<br />

type I transmembrane MMPs, glycosyl-phosphatidyl<br />

inosital (GPI)-linked MMPs, and type II transmembrane<br />

MMPs. (Please see table on the next page).<br />

All MMPs sequenced to date have at least three domains<br />

in common. The prodomain contains a highly conserved<br />

segment of eight amino acids that folds over to cover<br />

the catalytic site and helps to maintain the inactive<br />

conformation following the release of MMPs. Cleavage<br />

of the prodomain destabilizes the inhibitory interaction<br />

between the unpaired cysteine in the sequence and<br />

the active site zinc. The catalytic domain contains the<br />

conserved structural metal-binding sites consisting<br />

of 106 to 119 residues. MMPs also contain a highly<br />

conserved zinc-binding active site domain containing<br />

52 to 58 amino acids. The zinc-binding domain contains<br />

three His residues that occupy three of the coordination<br />

sites of the active site Zn 2+ . In addition to these, the<br />

hemopexin-like domain found in all MMPs (except<br />

MMP-7) plays a role in substrate specificity.<br />

The activation of MMPs is dependent mainly on<br />

urokinase-type (uPA) and tissue-type (tPA) plasminogen<br />

activators that cleave plasminogen into active plasmin.<br />

A major control point in the regulation of active enzyme<br />

is inhibition of the active form by the TIMP family of<br />

inhibitors (21-28 kDa). TIMPs regulate the function of<br />

MMPs either by inhibiting active MMPs or by controlling<br />

their activation process. They form tight, non-covalent<br />

inhibitory complexes with MMPs (K d = 10–50 pM).<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Collagenase<br />

Family<br />

MMP-1, 8,<br />

13, 18<br />

Gelatinase<br />

Family<br />

MMP-2, 9<br />

Stromelysin Family<br />

MMP-3, 10, 11<br />

Membrane-Type<br />

Family<br />

MMP-14, 15,<br />

16, 17<br />

Matrilysin<br />

MMP-7<br />

Proteases<br />

MMPs facilitate tumor cell invasion and metastasis by at<br />

least three distinct mechanisms: (a) by eradicating physical<br />

barriers to invasion through degradation of collagens,<br />

laminins, and proteoglycans in the ECM, (b) by modulating<br />

cell adhesion and enabling cells to form new cell-to-cell<br />

and cell-to-matrix attachments while breaking the existing<br />

ones, and (c) by acting on ECM components and other<br />

proteins to expose hidden biological activities, such as<br />

release of angiostatin from plasminogen. In normal adults,<br />

MMP expression is very low except in rapidly remodeling<br />

tissue, such as wound healing and menstrual endometrium.<br />

Many control elements, such as secretion of MMPs in their<br />

latent form and the presence of TIMPs, tend to keep MMPs<br />

inactive in the ECM.<br />

References:<br />

Signal/Prodomain Catalytic Domain Hinge Hemopexin<br />

PRCGVPD<br />

Region<br />

RXKR<br />

Gelatin Binding<br />

Gueders, M.M. etal. 2006. Eur. J. Pharmacol. 533, 33.<br />

Elkington, P.T. etal. 2005. Clin. Exp. Immunol. 142, 2.<br />

Bode, W. 2003. Biochem. Soc. Symp. 70, .<br />

Fingleton, B. and Matrisian, L.M. 200 . Curr. Opin. Oncol. 13, 368.<br />

More online... www.calbiochem.com/inhibitors/MMP<br />

Transmembrane<br />

Technical Support<br />

Phone 800 628 8470<br />

E-mail calbiochem@emdbiosciences.com<br />

9


Proteases<br />

Matrix Metalloproteinase (MMP Groups)<br />

Group MMP<br />

Simple Hemopexin Domain-Containing MMPs MMP- , MMP-3, MMP-8, MMP- 0, MMP- 2, MMP- 3,<br />

MMP- 8, MMP- 9, MMP-20, MMP-22, and MMP-27<br />

Gelatin-Binding MMPs MMP-2 and MMP-9<br />

Furin-Activated Secreted MMPs MMP- and MMP-28<br />

Vitronectin-Like Insert MMPs MMP-2<br />

Minimal Domain MMPs MMP-7 and MMP-26<br />

GPI-linked MMPs MMP- 7 and MMP-25<br />

Type I Transmembrane MMPs MMP- 4, MMP- 5, MMP- 6, and MMP-24<br />

Type II Transmembrane MMPs MMP-23<br />

Matrix Metalloproteinase <strong>Inhibitor</strong>s<br />

Product Cat. No. Comments Size Price<br />

Chlorhexidine, Dihydrochloride 220557 1,6-bis[N´-(p-Chlorophenyl)-N5-biguanido]hexane, 2HCl, CH<br />

An antimicrobial agent that acts as an inhibitor of MMP-2 and MMP-9;<br />

however, MMP-2 is more sensitive to chlorhexidine than MMP-9.<br />

CL-82 98 233105 A selective inhibitor of MMP- 3 (IC = 0 mM) that does not appear<br />

50<br />

to act by chelating Zn2+ . Binds within the entire S ´ pocket of MMP- 3,<br />

docking with the morpholine ring adjacent to the catalytic zinc atom.<br />

Does not inhibit MMP- , MMP-9, or TACE.<br />

GM 489 364200 {N-[(2R)-2-(Carboxymethyl)-4-methylpentanoyl]-L-tryptophan-(S)methyl-benzylamide}<br />

A potent broad-spectrum inhibitor of MMPs. Inhibits MMPs in vitro<br />

(K = 200 pM for MMP- ; 500 nM for MMP-2; 20 mM for MMP-3;<br />

i<br />

00 nM for MMP-8; 00 nM for MMP-9).<br />

GM 600 364205 {Galardin; N-[(2R)-2-(Hydroxamidocarbonylmethyl)-4-methylpentanoyl]-<br />

L-tryptophan Methylamide}<br />

A potent broad-spectrum hydroxamic acid inhibitor of MMPs. Inhibits<br />

MMPs in vitro (K = 400 pM for skin fibroblast MMP- ; 500 pM for<br />

i<br />

MMP-2; 27 nM for MMP-3; 0. nM for MMP-8; and 200 pM for MMP-9).<br />

00 mg $28<br />

5 mg $96<br />

N InSolution GM600 364206 A 0 mM ( mg/257 ml) solution of GM600 (Cat. No. 364205) in DMSO. mg $62<br />

GM 600 , Negative Control 364210 (N-t-Butoxycarbonyl-L-leucyl-L-tryptophan Methylamide)<br />

A useful negative control for the MMP inhibitor GM 600<br />

(Cat. No. 364205).<br />

MMP <strong>Inhibitor</strong> I 444250 (FN-439)<br />

An inhibitor of MMP- and MMP-8 (IC = .0 mM), MMP-9<br />

50<br />

(IC = 30 mM), and MMP-3 (IC = 50 mM).<br />

50 50<br />

MMP <strong>Inhibitor</strong> II 444247 {N-Hydroxy-1,3-di-(4-methoxybenzenesulphonyl)-5,5-dimethyl-[1,3]piperazine-2-carboxamide}<br />

An inhibitor of MMP- (IC = 24 nM), MMP-3 (IC = 8.4 nM), MMP-7<br />

50 50<br />

(IC = 30 nM), and MMP-9 (IC = 2.7 nM).<br />

50 50<br />

MMP <strong>Inhibitor</strong> III 444264 A homophenylalanine-hydroxamic acid based broad-spectrum cellpermeable,<br />

reversible inhibitor of matrix metalloproteinases (supplied<br />

as a racemic mixture). Inhibits MMP- (IC = 7.4 nM), MMP-2<br />

50<br />

(IC = 2.3 nM), MMP-3 (IC = 35 nM), MMP-7 (IC = 0– 00 nM),<br />

50 50 50<br />

and MMP- 3 (IC = – 0 nM).<br />

50<br />

MMP <strong>Inhibitor</strong> IV 444271 (HONH-COCH CH CO-FA-NH )<br />

2 2 2<br />

A peptide hydroxamic acid that inhibits MMPs and pseudolysin from<br />

P. aeruginosa (~500 nM).<br />

MMP-2 <strong>Inhibitor</strong> I 444244 (OA-Hy; cis-9-Octadecenoyl-N-hydroxylamide; Oleoyl-N-hydroxylamide)<br />

A potent inhibitor of MMP-2 (K i = .7 mM).<br />

MMP-2 <strong>Inhibitor</strong> II 444286 An oxirane analog of SB-3CT, pMS (Cat. No. 444285) that acts as a<br />

selective, active site-binding, irreversible inhibitor of MMP-2<br />

(K i = 2.4 µM).<br />

20 Orders Phone 800 854 34 7<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Fax 800 776 0999<br />

Web www.emdbiosciences.com/calbiochem<br />

mg<br />

5 mg<br />

mg<br />

5 mg<br />

mg<br />

5 mg<br />

$62<br />

$20<br />

$62<br />

$20<br />

$62<br />

$20<br />

0 mg $ 36<br />

mg $ 5<br />

mg $ 0<br />

5 mg $ 0<br />

0 mg $67<br />

5 mg $ 44


Matrix Metalloproteinase <strong>Inhibitor</strong>s, continued<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Proteases<br />

Product Cat. No. Comments Size Price<br />

MMP-2/MMP-3 <strong>Inhibitor</strong> I 444239 {N-[[(4,5-Dihydro-5-thioxo-1,3,4-thiadiazol-2-yl)amino]carbonyl]-Lphenylalanine<br />

Methyl Ester}<br />

A potent inhibitor of MMP-2 (K i = 7 mM) and MMP-3 (K i = 290 nM).<br />

MMP-2/MMP-3 <strong>Inhibitor</strong> II 444240 {a-[[[4,5-Dihydro-5-thioxo-1,3,4-thiadiazol-2-yl)amino]carbonyl]amino]-<br />

((2-pyridyl)piperazinyl)-(S)-benzenepropanamide}<br />

A potent inhibitor of MMP-2 (K i = 4.5 mM) and MMP-3 (K i = 520 nM).<br />

MMP-2/MMP-9 <strong>Inhibitor</strong> I 444241 {(2R)-2-[(4-Biphenylylsulfonyl)amino]-3-phenylpropionic Acid}<br />

A potent inhibitor of MMP-2 (IC 50 = 3 0 nM) and MMP-9 (IC 50 = 240 nM).<br />

MMP-2/MMP-9 <strong>Inhibitor</strong> II 444249 {(2R)-[(4-Biphenylylsulfonyl)amino]-N-hydroxy-3-phenylpropionamide}<br />

A potent inhibitor of type IV collagenases, MMP-2 (IC 50 = 7 nM) and<br />

MMP-9 (IC 50 = 30 nM).<br />

MMP-2/MMP-9 <strong>Inhibitor</strong> III 444251 A cyclic peptide that acts as a potent inhibitor of MMP-2 (IC 50 = 0 mM)<br />

and MMP-9 (IC 50 = 0 mM).<br />

MMP-2/MMP-9 <strong>Inhibitor</strong> IV 444274 (SB-3CT)<br />

A potent, selective, slow-binding, and mechanism-based inhibitor of<br />

human MMP-2 (K i = 3.9 nM) and MMP-9 (K i = 600 nM). Does not<br />

affect the activities of MMP- (K i = 206 mM) MMP-3 (K i = 5 mM), or<br />

MMP-7 (K i = 96 mM).<br />

N MMP-2/MMP-9 <strong>Inhibitor</strong> V 444285 A cell-permeable sulfonamido analog of SB-3CT (Cat. No. 444274) that<br />

displays enhanced aqueous solubility and improved selectivity<br />

(K i = 6 nM, 80 nM, and 900 nM for MMP-2, -9 and - 4, respectively).<br />

Binds to the active-site and acts as a mechanism-based, irreversible<br />

inhibitor of MMPs.<br />

MMP-3 <strong>Inhibitor</strong> I 444218 (Ac-RCGVPD-NH 2 ; Stromelysin-1 <strong>Inhibitor</strong>)<br />

An inhibitor of MMP-3 (IC 50 = 5 mM). Based on a segment from the<br />

conserved region of the N-terminal propeptide domain.<br />

MMP-3 <strong>Inhibitor</strong> II 444225 [N-Isobutyl-N-(4-methoxyphenylsulfonyl)-glycylhydroxamic Acid; NNGH]<br />

A potent inhibitor of human MMP-3 (K i = 30 nM).<br />

MMP-3 <strong>Inhibitor</strong> III 444242 {N-[[(4,5-Dihydro-5-thioxo-1,3,4-thiadiazol-2-yl)amino]carbonyl]-Lphenylalanine}<br />

A potent inhibitor of MMP-3 (K i = 3.2 mM) that inhibits MMP-2 only at<br />

higher concentrations (K i >200 mM).<br />

MMP-3 <strong>Inhibitor</strong> IV 444243 {a-[[[(4,5-Dihydro-5-thioxo-1,3,4-thiadiazol-2-yl)amino]carbonyl]amino]<br />

-N-(cyclohexylmethyl)-(S)-benzenepropanamide}<br />

A potent inhibitor of MMP-3 (K i = 8 0 nM) that inhibits MMP-2 only at<br />

higher concentrations (K i >200 mM).<br />

MMP-3 <strong>Inhibitor</strong> V 444260 (4-Dibenzofuran-2´-yl-4-hydroximino-butyric Acid)<br />

A potent and competitive inhibitor of MMP-3. Inhibits both human and<br />

rabbit MMP-3 (wild type and mutants) with K i values in the low mM range.<br />

MMP-3 <strong>Inhibitor</strong> VI 444265 [4-(4´-Biphenyl)-4-hydroxyimino-butyric Acid]<br />

A potent and competitive inhibitor of MMP-3. Inhibits both human and<br />

rabbit MMP-3 (wild type and mutants) with K i values in the low mM range.<br />

MMP-3 <strong>Inhibitor</strong> VII 444280 {3-[4-(4-cyanophenyl)phenoxy]propanohydroxamic Acid}<br />

A potent nonpeptide inhibitor of MMP-3 (stromelysin; IC 50 = 25 nM<br />

against the catalytic domain).<br />

MMP-3 <strong>Inhibitor</strong> VIII 444281 {N-Hydroxy-2(R)-{[(4-methoxyphenyl)sulfonyl]-[benzylamino]}-4methylpentanamide}<br />

A cell-permeable, potent inhibitor of human MMP-3 (stromelysin;<br />

K i = 23 nM) and murine macrophage metalloelastase (MME/MMP- 2;<br />

IC 50 = 3 nM).<br />

MMP-8 <strong>Inhibitor</strong> I 444237 {(3R)-(+)-[2-(4-Methoxybenzenesulfonyl)-1,2,3,4-tetrahydroisoquinoline-<br />

3-hydroxamate]}<br />

MMP-8 <strong>Inhibitor</strong> I,<br />

Negative Control<br />

A potent inhibitor of MMP-8 (IC 50 = 4 nM).<br />

444238 {(3S)-(–)-[2-(4-Methoxybenzenesulfonyl)-1,2,3,4-tetrahydroisoquinoline-<br />

3-hydroxamate]}<br />

A negative control for MMP-8 <strong>Inhibitor</strong> I (Cat. No. 444237; IC 50 = mM).<br />

5 mg $ 46<br />

2 mg $ 5<br />

5 mg $ 46<br />

mg $ 5<br />

mg $ 36<br />

500 mg $ 23<br />

500 mg $ 34<br />

5 mg $202<br />

5 mg $85<br />

2 mg $ 42<br />

2 mg $ 7<br />

5 mg $84<br />

5 mg $55<br />

mg $ 03<br />

5 mg $ 78<br />

mg $79<br />

mg $55<br />

Technical Support<br />

Phone 800 628 8470<br />

E-mail calbiochem@emdbiosciences.com<br />

2


Proteases<br />

Matrix Metalloproteinase <strong>Inhibitor</strong>s, continued<br />

Product Cat. No. Comments Size Price<br />

MMP-9 <strong>Inhibitor</strong> I 444278 A potent and selective inhibitor of MMP-9 (IC 50 = 5 nM). Inhibits<br />

MMP- (IC 50 = .05 mM) and MMP- 3 (IC 50 = 3 nM) only at much<br />

higher concentrations<br />

MMP-9/MMP- 3 <strong>Inhibitor</strong> I 444252 [N-Hydroxy-1-(4-methoxyphenyl)sulfonyl-4-(4-biphenylcarbonyl)piperaz<br />

ine-2-carboxamide]<br />

A highly-potent, piperazine-based inhibitor of MMP-9 and MMP- 3<br />

(IC 50 = 900 pM). Inhibits MMP- and MMP-3 at much higher<br />

concentrations (IC 50 = 43 nM and 23 nM, respectively). Also acts as<br />

an inhibitor of MMP-7 (IC 50 = 930 nM).<br />

MMP-9/MMP- 3 <strong>Inhibitor</strong> II 444253 [N-Hydroxy-1-(4-methoxyphenyl)sulfonyl-4-benzyloxycarbonylpiperazine-<br />

2-carboxamide]<br />

A highly-potent, piperazine-based potent inhibitor of MMP-9 (IC 50 =<br />

.9 nM) and MMP- 3 (IC 50 = .3 nM). Inhibits MMP- and MMP-3 at<br />

higher concentrations (IC 50 = 24 nM and 8 nM, respectively). Also acts<br />

as a weak inhibitor of MMP-7 (IC 50 = 230 nM).<br />

N MMP- 3 <strong>Inhibitor</strong> 444283 [Pyrimidine-4,6-dicarboxylic acid, bis-(4-fluoro-3-methyl-benzylamide)]<br />

A pyrimidine dicarboxamide compound that potently inhibits MMP- 3<br />

activity (IC 50 = 8 nM) with expected selectivity over MMP- , -2, -3, -7,<br />

-8, -9, - 0, - 2, - 4, and - 6 as determined by conformational structure<br />

analysis. Shown to bind to the MMP- 3 catalytic domain and act as a<br />

non-zinc-chelating inhibitor.<br />

DL-Thiorphan 598510 {N-[(RS)-2-Benzyl-3-mercaptopropanoyl]-glycine}<br />

A thiol containing amido-acid that selectively binds to the active site<br />

zinc of metalloproteinases and blocks their activity (IC 50 = 2. nM for<br />

neutral endopeptidase-NEP). Although it is shown to inhibit the activity<br />

for Ab peptide degrading enzyme neprilysin in vitro, it has no effect on<br />

the secretion of Ab peptide or amyloid b precursor protein (APP). Also<br />

inhibits the activity of angiotensin-converting enzyme (ACE) at much<br />

higher concentrations (IC 50 = 4 mM); however, it does not affect the<br />

activity of endothelin-converting enzyme.<br />

XG076 682300 7-Aza-2-phenylbenzisothizol-3-one<br />

An isothiazolone derivative that inhibits the activation of pro-MMPs<br />

but does not affect the activity of active MMPs.<br />

Related Products<br />

MMP-1 ELISA Kit<br />

The MMP- ELISA is a non-isotopic colorimetric assay kit for the in<br />

vitro quantification of human MMP- protein in tissue culture medium<br />

and serum. Not available for sale in Japan.<br />

Cat. No. QIA55 1 kit $412<br />

MMP-2 ELISA Kit<br />

A non-isotopic colorimetric assay for the in vitro assay of human<br />

MMP-2 protein in tissue culture media, serum, or plasma. Not available<br />

for sale in Japan.<br />

Cat. No. QIA63 1 kit $412<br />

MMP-9 ELISA Kit<br />

A sandwich ELISA based kit designed specifically for assay of MMP-9 in<br />

human cell lines in suspension or adherent cells. Not available for sale<br />

in Japan.<br />

Cat. No. QIA56 1 kit $424<br />

MMP-3 ELISA Kit<br />

500 mg $96<br />

mg $87<br />

mg $ 02<br />

mg $93<br />

0 mg $ 95<br />

5 mg $ 27<br />

A sandwich ELISA based kit that can be used to assay of MMP-3 in cells<br />

in suspension and in adherent cells. Not available for sale in Japan.<br />

Cat. No. QIA73 1 kit $412<br />

MMP-13 ELISA Kit<br />

A highly sensitive and specific kit for detection of active MMP- 3<br />

from human samples, including serum, synovial fluid, and cell culture<br />

supernatant. Does not recognize MMP- , MMP-2, MMP-3, MMP-8,<br />

MMP-9, or the latent form of MMP- 3.<br />

Cat. No. QIA130 1 kit $525<br />

InnoZyme Gelatinase Activity Assay Kit, Fluorogenic<br />

A sensitive fluorogenic assay (Ex. max: ~325 nm; Em. max.: ~393 nm)<br />

for the measurement of gelatinases (MMP-2 and MMP-9). Also useful<br />

for the screening of gelatinase inhibitors.<br />

Cat. No. CBA003 1 kit $375<br />

22 Orders Phone 800 854 34 7<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Fax 800 776 0999<br />

Web www.emdbiosciences.com/calbiochem


Tissue <strong>Inhibitor</strong>s of Matrix Metalloproteinases (TIMPs)<br />

Tissue inhibitors of metalloproteinases (TIMPs) are a<br />

family of ubiquitous, endogenous inhibitors that regulate<br />

the activation and activity of matrix metalloproteinases<br />

(MMPs). They have been shown in animal models to<br />

be capable of the inhibition of tumor cell invasion and<br />

metastasis. They may also be involved in other diseases<br />

such as arthritis and periodontal disease. TIMP-1 is<br />

a 184 amino acid glycoprotein of 28.5 kDa. TIMP-1<br />

preferentially binds and inhibits MMP-9 and MMP-<br />

1 through interaction with their catalytic domains.<br />

TIMP-2 is a 194 amino acid, non-glycosylated protein<br />

of 21 kDa with 43% and 44% homology to TIMP-1 and<br />

TIMP-3, respectively. It inhibits the activity of all active<br />

MMPs and regulates MMP-2 expression by binding to<br />

the C-terminal region of pro-MMP-2 (K d ~5 nM). As<br />

with TIMP-1, TIMP-2 has been shown to have erythroidpotentiating<br />

activity and cell growth-promoting<br />

Tissue <strong>Inhibitor</strong>s of Matrix Metalloproteinases<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Proteases<br />

activity. TIMP-3 is present in the eye. It is tightly bound<br />

to the extracellular matrix and has been shown to<br />

inhibit TNF-a converting enzyme (TACE). A mutation<br />

in TIMP-3 is found in Sorsby's fundus dystrophy, a<br />

dominantly-inherited form of blindness. TIMP-4 blocks<br />

the activities of several (MMPs) implicated in the<br />

arthritic cartilage erosion.<br />

References:<br />

Visse, R., and Nagase, H. 2003. Cir. Res. 92, 827.<br />

Cheung, P.Y., et al. 200 . Proc. West Pharmacol. Soc. 44, 97.<br />

Mannello, F., and Gazzanelli, G. 200 . Apoptosis 6, 479.<br />

Herbst, H., et al. 997. Am. J. Pathol. 150, 647.<br />

Jung, K., et al. 997. Int. J. Cancer 74, 220.<br />

Rivera, S., et al. 997. J. Neurosci. 17, 4223.<br />

Vallon, R., et al. 997. Eur. J. Biochem. 244, 8 .<br />

Cottam, D.W., et al. 993. Intl. J. Oncol. 2, 86 .<br />

Stetler-Stevenson, W.G. et al. 993. FASEB J. 7, 434.<br />

Product Cat. No. Comments Size Price<br />

TIMP- , Recombinant, Bovine PF020 (Tissue <strong>Inhibitor</strong> of Metalloproteinase-1)<br />

A CHO cell-derived protein. Shown to inhibit MMP- (IC 50 = –5 nM).<br />

Not available for sale in Japan.<br />

TIMP- , Human Neutrophil<br />

Granulocyte<br />

612080 (Tissue <strong>Inhibitor</strong> of Metalloproteinase-1)<br />

A 28 kDa glycoprotein that forms a non-covalent stochiometric<br />

complex with latent and active MMPs. Binds to pro-MMP-9 and<br />

MMP-9 via their C-terminal domains.<br />

TIMP- , Recombinant, Human PF019 (Tissue <strong>Inhibitor</strong> of Metalloproteinase-1)<br />

A 28 kDa glycoprotein that is expressed by a variety of cell types. It<br />

forms a non-covalent, stoichiometric complex with both latent and<br />

active MMPs. TIMP- preferentially binds and inhibits MMP-9. Not<br />

available for sale in Japan.<br />

TIMP-2, Human Rheumatoid<br />

Synovial Fibroblast<br />

More online... www.calbiochem.com/inhibitors/TIMPs<br />

612084 (Tissue <strong>Inhibitor</strong> of Metalloproteinase-2)<br />

Forms a non-covalent stoichiometric complex with latent and active<br />

MMPs. Shown to inhibit the activities of MMP- , MMP-2, MMP- 2, and<br />

transin.<br />

TIMP-2, Human, Recombinant PF021 (Tissue <strong>Inhibitor</strong> of Metalloproteinase 2)<br />

A 2 kDa (nonreduced) or a 24 kDa (reduced) protein expressed by a<br />

variety of cell types. Forms a non-covalent, stoichiometric complex<br />

with both latent and active MMPs. TIMP-2 preferentially binds and<br />

inhibits MMP-2. Not available for sale in Japan.<br />

TIMP-2, Mouse, Recombinant PF098 (Tissue <strong>Inhibitor</strong> of Metalloproteinase-2)<br />

A 94 amino acid non-glycosylated protein with 43% and 44%<br />

homology to TIMP- and TIMP-3, respectively. Inhibits the activity of<br />

all MMPs and regulates MMP-2 expression by binding to the C-terminal<br />

region of pro-MMP-2. TIMP-2 is constitutively produced by most cell<br />

types in culture, along with MMP-2.<br />

TIMP-3, Human, Recombinant PF095 (Tissue <strong>Inhibitor</strong> of metalloproteinase-3)<br />

Constitutively produced by many cell types. Differs from the other<br />

TIMPs in its localization to the extracellular matrix. TIMP-3 is more<br />

basic than the other TIMPs, and the basic residues are thought to help<br />

anchor TIMP-3 into the ECM.<br />

3 mg $ 53<br />

5 mg $225<br />

3 mg $ 53<br />

5 mg $225<br />

3 mg $ 53<br />

5 mg $276<br />

5 mg $276<br />

Technical Support<br />

Phone 800 628 8470<br />

E-mail calbiochem@emdbiosciences.com<br />

23


Proteases<br />

Tissue <strong>Inhibitor</strong>s of Matrix Metalloproteinases, continued<br />

Product Cat. No. Comments Size Price<br />

5 mg $276<br />

TIMP-3, Mouse Recombinant PF096 (Tissue <strong>Inhibitor</strong> of metalloproteinase-3)<br />

Constitutively produced by many cell types in culture. Differs from the<br />

other TIMPs in its localization to the extracellular matrix. Has a more<br />

basic K i than the other TIMPs, and the basic residues are thought to<br />

help anchor TIMP-3 into the ECM. TIMP-3 is an efficient ”sheddase“<br />

inhibitor, inhibiting ADAM- 7 (TACE) at the low nanomolar levels.<br />

TIMP-4, Human Fibroblast PF097 (Tissue <strong>Inhibitor</strong> of metalloproteinase-4)<br />

Binds to Gelatinase A in manner similar to TIMP-2. Overexpression of<br />

TIMP-4 is reported to reduce cell invasiveness in vitro.<br />

Related Products<br />

TIMP-1 ELISA Kit<br />

A non-isotopic, colorimetric, sandwich ELISA based kit specific for<br />

human TIMP- protein in tissue culture media or serum. Not available<br />

for sale in Japan.<br />

Cat. No. QIA54 1 kit $412<br />

TIMP-2 ELISA Kit<br />

To view more than 80 MMP/ TIMP-related antibodies,<br />

visit our Antibody Resource at<br />

www.calbiochem.com/antibodyresource<br />

5 mg $276<br />

A non-isotopic, colorimetric, sandwich ELISA based kit specific for<br />

human TIMP-2 protein in tissue culture medium, serum, plasma and<br />

tissue lysates. Not available for sale in Japan.<br />

Cat. No. QIA40 1 kit $489<br />

24 Orders Phone 800 854 34 7<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Fax 800 776 0999<br />

Web www.emdbiosciences.com/calbiochem


Protease <strong>Inhibitor</strong>s<br />

The proper functioning of the cell requires an optimum<br />

level of important structural proteins, enzymes,<br />

and regulatory proteins. One mechanism whereby<br />

cells achieve this steady state level is by proteolytic<br />

degradation. Protein degradation exhibits first order<br />

kinetics and is an energy-dependent, irreversible process<br />

brought about by the action of several peptidases.<br />

Peptidases (proteases) can be subdivided into two major<br />

groups: the endopeptidases and the exopeptidases, which<br />

cleave peptide bonds either at points within the protein<br />

or remove amino acids sequentially from either the N-<br />

or C-terminus, respectively. The term proteinase is also<br />

used as a synonym for endopeptidase. The International<br />

Union of Biochemistry and Molecular Biology (IUBMB)<br />

has recognized four classes of proteases: serine<br />

proteinases, cysteine proteinases, aspartic proteinases,<br />

and metalloproteinases.<br />

In vivo, proteins are either protected in specialized<br />

compartments or they reside in a special protective<br />

conformation. Every protein isolated from cells is a<br />

potential substrate for proteolytic enzymes. Protease<br />

Protease <strong>Inhibitor</strong>s<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Proteases<br />

inhibitors are often used in experimental protocols that<br />

require extraction and analysis of intact proteins. These<br />

inhibitors block the activity of proteases and minimize<br />

tissue damage during purification procedures and organ<br />

perfusion studies. More recently, selected protease<br />

inhibitors have been used as anti-HIV agents.<br />

Commonly used protease inhibitors are either synthetic<br />

or of bacterial or fungal origin. They inhibit protease<br />

activity in either a reversible or irreversible manner.<br />

Over 100 naturally occurring protease inhibitors<br />

have been identified so far. They behave as tightbinding<br />

reversible or pseudo-irreversible protease<br />

inhibitors preventing substrate access to the active<br />

site through steric hindrance. Some of them act by<br />

modifying an amino acid residue of the protease active<br />

site. For example, serine proteases are inactivated<br />

by phenylmethane sulfonyl fluoride (PMSF), which<br />

reacts with the active site serine, whereas the<br />

chloromethylketone derivatives react with the histidine<br />

of the catalytic triad.<br />

More online... www.calbiochem.com/inhibitors/protease<br />

Product Cat. No. Comments Size Price<br />

mg $ 56<br />

Acetyl-Pepstatin 110175 [Ac-Val-Val-(3S,4S)-Sta-Ala-(3S,4S)-Sta-OH]<br />

An aspartyl protease inhibitor that acts as an effective inhibitor of HIVproteinase<br />

(K i = 20 nM at pH 4.7).<br />

AEBSF, Hydrochloride 101500 [4-(2-Aminoethyl)benzenesulfonylfluoride, HCl]<br />

Water-soluble, non-toxic alternative to PMSF. Irreversible inhibitor of<br />

serine proteases. Reacts covalently with a component of the active<br />

site. Inhibits chymotrypsin, kallikrein, plasmin, trypsin, and related<br />

thrombolytic enzymes.<br />

AEBSF, Immobilized 101501 An immobilized form of the protease inhibitor AEBSF (Cat. No. 0 500)<br />

covalently attached to hydrophobic acrylic beads. Useful as a scavenger<br />

for serine proteases where the interfering protease-inhibitor complex<br />

can be easily removed.<br />

ALLN 208719 (Calpain <strong>Inhibitor</strong> I; LLNL; MG 101)<br />

Inhibits chymotrypsin-like activity of the proteasome (K = 5.7 mM).<br />

i<br />

Also inhibits calpain I, calpain II, cathepsin B, and cathepsin L.<br />

InSolution ALLN 208750 (Calpain <strong>Inhibitor</strong> I; LLNL; MG 101)<br />

A 0 mM (5 mg/ .30 ml) solution of ALLN (Cat. No. 2087 9).<br />

ALLM 208721 (Calpain <strong>Inhibitor</strong> II)<br />

<strong>Inhibitor</strong> of calpain I (K i = 20 nM), calpain II (K i = 230 nM), cathepsin B<br />

(K i = 00 nM), and cathepsin L (K i = 600 pM).<br />

Amastatin, Streptomyces sp. 129875 [(2S,3R)-3-Amino-2-hydroxy-5-methylhexanoyl-Val-Val-Asp-OH]<br />

Binds to cell surfaces and reversibly inhibits aminopeptidases. A<br />

slow binding, competitive inhibitor of aminopeptidase M and leucine<br />

aminopeptidase. Has no significant effect on aminopeptidase B.<br />

e-Amino-n-caproic Acid 1381 (EACA)<br />

A lysine analog that inhibits carboxypeptidase B. Promotes rapid<br />

dissociation of plasmin by inhibiting the activation of plasminogen.<br />

50 mg<br />

00 mg<br />

500 mg<br />

g<br />

$42<br />

$69<br />

$263<br />

$470<br />

50 mg $98<br />

5 mg<br />

25 mg<br />

$48<br />

$ 72<br />

5 mg $63<br />

25 mg $ 70<br />

mg $ 06<br />

500 g $92<br />

Technical Support<br />

Phone 800 628 8470<br />

E-mail calbiochem@emdbiosciences.com<br />

25


Proteases<br />

Protease <strong>Inhibitor</strong>s, continued<br />

Product Cat. No. Comments Size Price<br />

N Aminopeptidase N <strong>Inhibitor</strong> 164602 [APN/CD13 <strong>Inhibitor</strong>; 2',3-Dinitroflavone-8-acetic acid; 3-Nitro-2-(2nitrophenyl)-4-oxo-4H-1-benzopyran-8-acetic<br />

acid) ]<br />

5 mg $95<br />

a -Antichymotrypsin, Human<br />

Plasma<br />

A selective, reversible, and competitive inhibitor of aminopeptidase N<br />

(APN/CD 3; IC = 25 mM in U937 cells).<br />

50<br />

178196 (a -Achy; a -1X-Glycoprotein; a -1X)<br />

1 1 1<br />

An acute phase plasma protein that functions as a specific inhibitor of<br />

chymotrypsin-like serine proteases.<br />

Antipain, Dihydrochloride 178223 Peptidyl arginine aldehyde protease inhibitor produced by<br />

actinomycetes. <strong>Inhibitor</strong> of Ca2+ -dependent endopeptidases. Has<br />

specificity similar to Leupeptin (Cat. No. 08975). Inhibits trypsin-like<br />

serine proteases, papain and some cysteine proteases (IC = 300 mM).<br />

50<br />

Antipain, Hydrochloride 178220 A reversible inhibitor of cysteine and serine proteases. 5 mg<br />

0 mg<br />

a 2 -Antiplasmin, Human Plasma 178221 (Primary Plasmin <strong>Inhibitor</strong>; a 2 -Protease <strong>Inhibitor</strong>)<br />

An inhibitor of plasminogen-activator-induced lysis of fibrin clots.<br />

Forms a covalent complex with plasmin and inactivates it.<br />

Antithrombin III, Human Plasma 169756 (ATIII; Factor Xa inhibitor; Heparin cofactor)<br />

Complexes with serine proteases of blood coagulation system including<br />

thrombin, plasmin, kallikrein, and factors IXa, Xa, Xla, and XIIa. Potency<br />

is strongly enhanced in the presence of heparin.<br />

a -Antitrypsin, Human Plasma 178251 (a -AT; 3.5S a -Glycoprotein; a -Proteinase <strong>Inhibitor</strong>)<br />

1 1 1<br />

A serine protease inhibitor that also acts as a major physiological<br />

regulator of elastase.<br />

p-APMSF, Hydrochloride 178281 (p-Amidinophenylmethylsulfonylfluoride, HCl)<br />

A specific irreversible inhibitor of trypsin-like serine proteases.<br />

A suitable alternative to DFP and PMSF.<br />

Aprotinin, Bovine Lung,<br />

Crystalline<br />

616370 (Pancreatic Trypsin <strong>Inhibitor</strong>; Trypsin-Kallikrein <strong>Inhibitor</strong>)<br />

A competitive and reversible inhibitor of esterase and protease<br />

activity. Forms a tight complex with and blocks the active site of<br />

target enzymes. Inhibits a number of different proteases, including<br />

chymotrypsin, coagulation factors involved in the pre-phase of blood<br />

clotting, kallikrein (K d = x 0 -7 M), plasmin (K d = 2.3 x 0 - 0 M), tissue<br />

and leukocyte proteinases, and trypsin (K d = 5 x 0 - 4 M).<br />

Aprotinin, Bovine Lung, Solution 616399 (Kallikrein Inactivator)<br />

A competitive and reversible inhibitor of proteolytic and esterolytic<br />

activity. A serine protease inhibitor. In cell cultures, extends the life of<br />

cells and prevents proteolytic damage to intact cells.<br />

N Aprotinin, Bovine, Recombinant,<br />

Nicotiana sp., Animal-Free<br />

616371 A competitive, heat stable, reversible inhibitor of proteolytic and<br />

esterolytic activity. Effective at concentrations equimolar with<br />

protease.<br />

ATBI, Synthetic 189250 (AGKKDDDDPPE; Alkalo-thermophilic Bacillus <strong>Inhibitor</strong>)<br />

A potent inhibitor of various aspartyl proteases. Shown to inhibit pepsin<br />

in a slow-tight binding, competitive manner (K i = 55 pM). Also functions<br />

as a tight binding, non-competitive inhibitor of HIV- protease that<br />

functions at the active site of the flap region (K i = 7.8 nM).<br />

Benzamidine, Hydrochloride 199001 <strong>Inhibitor</strong> of trypsin and trypsin-like enzymes. Benzamidine derivatives<br />

have been used in inhibiting the growth of colon carcinoma cells.<br />

Inhibits factor VII autoactivation.<br />

Bestatin 200484 {[(2S,3R)-3-Amino-2-hydroxy-4-phenylbutanoyl]-Leu}<br />

Binds to cell surfaces and inhibits cell surface aminopeptidases, notably<br />

aminopeptidase B and leucine aminopeptidase. Activates macrophages<br />

and T lymphocytes. Has antitumor properties.<br />

Bestatin Methyl Ester 200485 {(-)-N-[(2S, 3R)-3-Amino-2-hydroxy-4-phenylbutyryl]-L-leucine Methyl<br />

Ester}<br />

A cell-permeable derivative of Bestatin (Cat. No. 200484) that displays<br />

slightly stronger inhibition of neutral aminopeptidase than Bestatin but<br />

has much weaker activity against basic aminopeptidase.<br />

26 Orders Phone 800 854 34 7<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Fax 800 776 0999<br />

Web www.emdbiosciences.com/calbiochem<br />

00 mg<br />

mg<br />

$76<br />

$474<br />

0 mg $74<br />

$4<br />

$76<br />

00 mg $58<br />

mg $ 97<br />

mg<br />

5 mg<br />

$74<br />

$287<br />

5 mg $90<br />

0 mg<br />

20 mg<br />

00 mg<br />

00 KU<br />

500 KU<br />

mg<br />

5 mg<br />

25 mg<br />

$47<br />

$79<br />

$299<br />

$79<br />

$29<br />

$52<br />

$72<br />

$ 44<br />

mg $8<br />

5 g<br />

25 g<br />

$28<br />

$62<br />

0 mg $ 0<br />

5 mg $ 22


Protease <strong>Inhibitor</strong>s, continued<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Proteases<br />

Product Cat. No. Comments Size Price<br />

CA-074 205530 {Cathepsin B <strong>Inhibitor</strong> III; [L-3-trans-(Propylcarbamoyl)oxirane-2carbonyl]-L-isoleucyl-L-proline}<br />

A potent, irreversible inhibitor of Cathepsin B in vivo and in vitro<br />

(IC 50 = 2.24 nM for rat liver cathepsin B).<br />

CA-074 Me 205531 {Cathepsin B <strong>Inhibitor</strong> IV; [L-3-trans-(Propylcarbamoyl)oxirane-2carbonyl]-L-isoleucyl-L-proline<br />

Methyl Ester}<br />

Calpastatin, Human,<br />

Recombinant, Domain I<br />

A cell-permeable analog of CA-074 (Cat. No. 205530) that acts as an<br />

inhibitor of intracellular cathepsin B.<br />

208900 A potent inhibitor of calpain, a Ca 2+ -dependent cysteine protease. Has<br />

greater inhibitory action than calpain inhibitors I and II. <strong>Inhibitor</strong>y<br />

sequence has 8 amino acid residues. Not available for sale in Japan.<br />

Calpeptin 03-34-0051 (Benzyloxycarbonylleucyl-norleucinal)<br />

A cell-permeable calpain inhibitor. Inactivates calpain I (ID 50 = 52 nM),<br />

calpain II (ID 50 = 34 nM), and papain (ID 50 = 38 nM).<br />

Carboxypeptidase <strong>Inhibitor</strong>,<br />

Potato<br />

217359 A potent inhibitor of a wide variety of digestive tract<br />

carboxypeptidases. In immobilized form, suitable for the purification of<br />

carboxypeptidases.<br />

Cathepsin <strong>Inhibitor</strong> I 219415 (Z-FG-NHO-Bz)<br />

A selective inhibitor of cathepsin B (k /K = 8.9 x 0 2 i 3 M- sec- ),<br />

cathepsin L (k /K = 3.8 x 0 2 i 5 M- sec- ), cathepsin S (k /K = 4.2 x 0 2 i 4 M- sec- ), and papain (k /K = .8 x 0 2 i 3 M- sec- ).<br />

Cathepsin <strong>Inhibitor</strong> II 219417 (Z-FG-NHO-BzME)<br />

A selective inhibitor of cathepsin B (k /K = 6.9 x 0 2 i 3 M- sec- ),<br />

cathepsin L (k /K = 3. x 0 2 i 5 M- sec- ), cathepsin S (k /K = 6.6 x 0 2 i 4 M- sec- ), and papain (k /K = .8 x 0 2 i 3 M- sec- ).<br />

Cathepsin <strong>Inhibitor</strong> III 219419 (Z-FG-NHO-BzOME)<br />

Cysteine protease inhibitor. Selectively inhibits cathepsin B (k /K = 2 i<br />

.0 x 04 M- sec- ), cathepsin L (k /K = .5 x 0 2 i 5 M- sec- ), cathepsin S<br />

(k /K = 6.6 x 0 2 i 4 M- sec- ), and papain (k /K = .0 x 0 2 i 3 M- sec- ).<br />

Cathepsin B <strong>Inhibitor</strong> I 342000 (Cathepsin B, <strong>Inhibitor</strong> I; Z-FA-FMK)<br />

A cathepsin B inhibitor. Also suitable as a negative control for caspase- .<br />

Cathepsin B <strong>Inhibitor</strong> II 219385 (Ac-LVK-CHO)<br />

A more active lysinal analog of leupeptin (Cat. No. 08975). Inhibits<br />

cathepsin B at nanomolar levels (IC 50 = 4 nM).<br />

Cathepsin G <strong>Inhibitor</strong> I 219372 A potent, selective, reversible, and competitive non-peptide inhibitor of<br />

cathepsin G (IC = 53 nM and K = 63 nM).<br />

50 i<br />

Cathepsin K <strong>Inhibitor</strong> I 219377 [1,3-Bis(N-carbobenzoyloxy-L-leucyl)amino Acetone; 1,3-Bis(CBZ-Leu-<br />

NH)-2-propanone]<br />

A cell-permeable, potent, selective, reversible inhibitor of cathepsin K<br />

(K = 22 nM). Binds to cathepsin K and span both the S- and S´- subsites.<br />

i<br />

Cathepsin K <strong>Inhibitor</strong> II 219379 [1-(N-Benzyloxycarbonyl-leucyl)-5-(N-Boc-phenylalanylleucyl)carbohydrazide;<br />

<strong>Inhibitor</strong> Boc-I; Z-L-NHNHCONHNH-LF-Boc]<br />

A cell-permeable, potent, selective, and reversible inhibitor of cathepsin<br />

K (K = 6 nM).<br />

i<br />

Cathepsin K <strong>Inhibitor</strong> III 219381 [1-(N-Benzyloxycarbonyl-leucyl)-5-(phenylalanyl-leucyl)carbohydrazide;<br />

<strong>Inhibitor</strong> I; Z-L-NHNHCONHNH-LF-NH ] 2<br />

A cell-permeable, potent, selective, reversible inhibitor of cathepsin K<br />

(K = 9.7 nM). At higher concentrations also inhibits the activities of<br />

i,app<br />

cathepsin L, cathepsin B, and papain (K = 20 nM, 5. mM, and<br />

i,app<br />

2.3 mM, respectively).<br />

Cathepsin L <strong>Inhibitor</strong> I 219421 (Z-FF-FMK)<br />

A potent, cell-permeable, and irreversible inhibitor of cathepsins B and L.<br />

Cathepsin L <strong>Inhibitor</strong> II 219426 (Z-FY-CHO)<br />

A potent and selective inhibitor of cathepsin L.<br />

Cathepsin L <strong>Inhibitor</strong> III 219427 [Z-FY(t-Bu)-DMK]<br />

An irreversible cathepsin L inhibitor. About 04-fold more effective<br />

against cathepsin L (k 2 /K i = 2 x 0 5 M - sec - ) than cathepsin S.<br />

mg $ 46<br />

mg $ 46<br />

mg<br />

3 mg<br />

5 mg<br />

25 mg<br />

00 mg<br />

$ 78<br />

$446<br />

$70<br />

$ 97<br />

$573<br />

5 mg $77<br />

mg $ 03<br />

mg $ 03<br />

mg $ 03<br />

mg<br />

5 mg<br />

$77<br />

$3 3<br />

mg $80<br />

mg $ 28<br />

5 mg $ 35<br />

mg $96<br />

mg $ 56<br />

mg $82<br />

5 mg $62<br />

5 mg $ 04<br />

Technical Support<br />

Phone 800 628 8470<br />

E-mail calbiochem@emdbiosciences.com<br />

27


Proteases<br />

Protease <strong>Inhibitor</strong>s, continued<br />

Product Cat. No. Comments Size Price<br />

Cathepsin L <strong>Inhibitor</strong> IV 219433 (1-Naphthalenesulfonyl-IW-CHO)<br />

A potent inhibitor of cathepsin L (IC 50 = .9 nM). Also inhibits the<br />

release of Ca 2+ and hydroxyproline from bone in an in vitro bone culture<br />

system.<br />

Cathepsin L <strong>Inhibitor</strong> V 219435 [Z-FY(OtBu)-COCHO]<br />

A slow, tight-binding reversible inhibitor of recombinant human<br />

cathepsin L (K i = 600 pM). Exhibits over 360-fold greater selectivity for<br />

cathepsin L compared to cathepsin B (K i = 2 4 nM).<br />

Cathepsin L <strong>Inhibitor</strong> VI 219495 [N-(4-Biphenylacetyl)-S-methylcysteine-(D)-Arg-Phe-b-phenethylamide;<br />

Compound 7]<br />

An end-protected tripeptide that acts as a highly selective, potent, and<br />

reversible inhibitor of human recombinant cathepsin-L (K i = 9 nM).<br />

Cathepsin S <strong>Inhibitor</strong> 219393 (Z-FL-COCHO)<br />

A slow, tight-binding reversible inhibitor of recombinant cathepsin S<br />

(K i = 85 pM). Exhibits over 4 0-fold greater selectivity for cathepsin S<br />

than for cathepsin B (K i = 76 nM).<br />

Cathepsin/Subtilisin <strong>Inhibitor</strong> 219420 (Boc-VF-NHO-Bz-pCl)<br />

Inhibits members of the cysteine protease family including cathepsin<br />

L, and members of the serine protease family including subtilisin<br />

Carlsberg and thermitase.<br />

Chymostatin 230790 {[(S)-1-Carboxy-2-phenylethyl]-carbamoyl-a-[2-amidohexahydro-4(S)pyrimidyl]-(S)-glycyl-[A<br />

= Leu; B = Val; or C = Ile]-phenylalaninal}<br />

A reversible serine and cysteine protease inhibitor. Inhibits<br />

chymotrypsin-like serine proteases.<br />

Chymotrypsin <strong>Inhibitor</strong> I, Potato 230906 A pentamer consisting of 5–8 kDa monomeric subunits. Each<br />

subunit inhibits one molecule of chymotrypsin. Suppresses radiation<br />

transformation of C3H/ 0T /2 cells in vitro.<br />

Cystatin, Egg White 240891 (Ovocystatin)<br />

A competitive and reversible cysteine protease inhibitor.<br />

3,4-Dichloroisocoumarin 287815 A potent irreversible inhibitor of serine proteases. Reacts with<br />

serine proteases to release acyl chloride moiety that can acylate<br />

another active site residue. Has no action on thiol proteases and<br />

metalloproteases.<br />

Diisopropylfluorophosphate 30967 (DFP)<br />

A potent irreversible inhibitor of serine proteases. Also irreversibly<br />

inactivates acetylcholinesterase.<br />

Dipeptidylpeptidase II <strong>Inhibitor</strong> 317621 (Dab-Pip; L-2,4-Diaminobutyrylpiperidinamide; DPP II <strong>Inhibitor</strong>)<br />

A potent and highly specific inhibitor of dipeptidylpeptidase II<br />

(IC 50 = 30 nM). Displays ~7700-fold greater selectivity for human<br />

seminal fluid DPP II compared to DPP IV (IC 50 > mM).<br />

Dipeptidylpeptidase IV <strong>Inhibitor</strong> I 416200 (Diprotin A)<br />

A serine protease inhibitor. Inhibits both endo- and exopeptidase<br />

activities of DPP IV.<br />

Dipeptidylpeptidase IV <strong>Inhibitor</strong> II 317638 A reversible inhibitor of dipeptidyl peptidase II (K = 3.8 mM) and<br />

i<br />

dipeptidyl peptidase IV (K = .0 mM).<br />

i<br />

,5-Dansyl-Glu-Gly-Arg<br />

Chloromethyl Ketone,<br />

Dihydrochloride<br />

251700 (1,5-DNS-GGACK, 2HCl)<br />

An effective irreversible inhibitor of Factor Xa (IC 50 = 00 nM) and<br />

urokinase.<br />

E-64 Protease <strong>Inhibitor</strong> 324890 An irreversible cysteine protease inhibitor that has no action on<br />

cysteine residues in other proteins. Specific active site titrant.<br />

Also inhibits the cysteine protease activity of GP 57/5 antigen of<br />

trypanosoma (IC = 00 nM).<br />

50<br />

E-64, Immobilized 324891 An immobilized form of the cysteine protease inhibitor E-64<br />

(Cat. No. 324890) covalently attached to hydrophilic acrylic beads via<br />

a 4-carbon spacer. Useful to affinity-precipitate cathepsins and other<br />

functionally related proteins from cell lysates or tissue extracts.<br />

Each set contains 25 mg of E-64 immobilized beads and 25 mg of<br />

control beads.<br />

mg $72<br />

mg $84<br />

5 mg $87<br />

mg $84<br />

mg $ 03<br />

28 Orders Phone 800 854 34 7<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Fax 800 776 0999<br />

Web www.emdbiosciences.com/calbiochem<br />

5 mg<br />

0 mg<br />

25 mg<br />

$60<br />

$ 08<br />

$22<br />

0 mg $63<br />

500 mg $305<br />

0 mg $ 30<br />

g $266<br />

0 mg $84<br />

5 mg $ 22<br />

mg $ 00<br />

5 mg $20<br />

mg<br />

5 mg<br />

25 mg<br />

$34<br />

$ 35<br />

$509<br />

set $ 73


Protease <strong>Inhibitor</strong>s, continued<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Proteases<br />

Product Cat. No. Comments Size Price<br />

Ecotin, E. coli 330200 A potent, broad range inhibitor of serine proteases. Exhibits picomolar<br />

binding constant for the inhibition of chymotrypsin, elastase, Factor<br />

Xa, Factor XIIa, kallikrein, and trypsin. Also an effective inhibitor of<br />

collagenase and Granzyme B.<br />

EDTA, Disodium Salt, Dihydrate,<br />

Molecular Biology Grade<br />

324503 (Ethylenediaminetetraacetic Acid, 2Na)<br />

A reversible metalloprotease inhibitor. A chelator that may interfere<br />

with other metal ion-dependent biological processes.<br />

EDTA, Tetrasodium Salt 34103 (Ethylenediaminetetraacetic Acid, 4Na)<br />

A reversible metalloprotease inhibitor. A chelator that may interfere<br />

with other metal ion-dependent biological processes.<br />

EGTA 324625 [Ethyleneglycol-bis(b-aminoethyl)-N,N,N´,N´-tetraacetic Acid]<br />

A metalloprotease inhibitor. Highly useful for removal of heavy metal<br />

ions in biological systems.<br />

EGTA, Molecular Biology Grade 324626 [Ethyleneglycol-bis(b-aminoethyl)-N,N,N´,N´-tetraacetic Acid]<br />

A metalloprotease inhibitor. Highly useful for removal of heavy metal<br />

ions in biological systems.<br />

Elastase <strong>Inhibitor</strong> I 324692 (Boc-AAA-NHO-Bz; PPE <strong>Inhibitor</strong>)<br />

A serine protease inhibitor that inhibits pancreatic elastase<br />

(K i = 28 M - sec - ) and thermitase.<br />

Elastase <strong>Inhibitor</strong> II 324744 (HNE <strong>Inhibitor</strong>; MeOSuc-AAPA-CMK; MSACK)<br />

A potent inhibitor of human neutrophil elastase.<br />

Elastase <strong>Inhibitor</strong> III 324745 (HLE <strong>Inhibitor</strong>; MeOSuc-AAPV-CMK)<br />

A potent inhibitor of human neutrophil elastase (K i = 0 mM).<br />

00 mg $ 35<br />

00 g<br />

kg<br />

$32<br />

$ 3<br />

500 g $52<br />

0 g<br />

25 g<br />

g $50<br />

$46<br />

$79<br />

mg $92<br />

5 mg $98<br />

5 mg $ 04<br />

Elastatinal 324691 A competitive inhibitor of elastase (K i = 240 nM). 5 mg $85<br />

EST 330005 [E-64d; (2S,3S)-trans-Epoxysuccinyl-L-leucylamido-3-methylbutane Ethyl<br />

Ester; Loxistatin]<br />

A cell-permeable calpain inhibitor. Its action is similar to E-64 (Cat. No.<br />

324890); however, it is devoid of charged groups.<br />

FUT- 75 344960 (6-Amidino-2-naphthyl-4-guanidinobenzoate Dimethanesulfonate;<br />

Futhan; Nafamostat Mesylate)<br />

A synthetic broad-specificity serine protease inhibitor. Potently<br />

inhibits both coagulation and complement proteinases (C3a, C4a, and<br />

C5a) as well as Granzyme A. Inhibits Factor VIIa-mediated, Factor Xa<br />

generation (IC 50 = 00 nM).<br />

GGACK 347436 (Glu-Gly-Arg-chloromethyl Ketone)<br />

An irreversible inhibitor of urokinase (IC 50 =80 mM).<br />

2-Guanidinoethyl-<br />

mercaptosuccinic Acid<br />

369334 (GEMSA)<br />

Potent inhibitor of a carboxypeptidase B-like processing enzyme<br />

referred to as enkephalin convertase (K i = 8.8 nM). Ideal for use in affinity<br />

chromatography of the enzyme.<br />

HDSF 373250 (Hexadecylsulfonyl Fluoride)<br />

A substrate analog of phenylmethylsulfonyl fluoride (PMSF) that acts as<br />

an irreversible inhibitor of the lysosomal lipolytic enzyme, palmitoylprotein<br />

thioesterase- (PPT ) (IC = 25 mM) by modifying an active<br />

50<br />

site serine (Ser 5 ) in the enzyme.<br />

HIV Protease <strong>Inhibitor</strong> 382135 A potent HIV protease inhibitor (IC = 900 nM) that acts by binding to<br />

50<br />

the active site of the HIV protease. Also inhibits cathepsin D (IC = 50<br />

37 mM) and pepsin (IC = 00 mM) at high concentrations.<br />

50<br />

a-Iodoacetamide 407710 An irreversible inhibitor of several cysteine proteases.<br />

Useful for alkylating cysteine and methionine residues.<br />

(Z-LL) 2 Ketone 421050 (1,3-di-(N-Carboxybenzoyl-L-leucyl-L-leucyl)amino Acetone)<br />

A novel cysteine protease inhibitor that specifically and efficiently<br />

inhibits processing of the p-Prl signal peptide (IC 50 ~50 nM) without<br />

affecting the activities of signal peptidases and other proteases such as<br />

lysosomal cathepsins and proteasomes.<br />

mg $96<br />

5 mg $ 42<br />

5 mg $ 45<br />

5 mg $ 43<br />

25 mg<br />

00 mg<br />

$45<br />

$ 46<br />

mg $77<br />

25 g $90<br />

5 mg $73<br />

Technical Support<br />

Phone 800 628 8470<br />

E-mail calbiochem@emdbiosciences.com<br />

29


Proteases<br />

Protease <strong>Inhibitor</strong>s, continued<br />

Product Cat. No. Comments Size Price<br />

Kininogen, High Molecular Weight,<br />

Single Chain, Human Plasma<br />

Kininogen, High Molecular<br />

Weight, Two Chain, Human<br />

Plasma<br />

Kininogen, Low Molecular<br />

Weight, Human Plasma<br />

422686 (HMWK, Fitzgerald factor)<br />

Synthesized as a single polypeptide chain in the liver and secreted into<br />

the plasma, where it complexes with prekallikrein and factor XI. A nonenzymatic<br />

cofactor of the contact activation system.<br />

422688 Two-chain kinin-free kininogen prepared by kallikrein digestion of<br />

kininogen, which is then re-purified to remove traces of kallikrein. Binds<br />

to papain and cathepsin S with high affinity, exhibiting 2: binding<br />

stoichiometry.<br />

422685 (L-Kininogen)<br />

A multi-functional plasma protein that functions as a cysteine protease<br />

inhibitor. A non-enzymatic cofactor of the contact activation system.<br />

Leuhistin 432077 [((2R,3S)-3-Amino-2-hydroxy-2-(1H-imidazol-4-ylmethyl)-5-methyl)-5methylhexanoic<br />

Acid]<br />

A microbial product that competitively inhibits aminopeptidase M<br />

(K = 230 nM).<br />

i<br />

Leupeptin, Hemisulfate 108975 (Ac-LLR-CHO, ½H SO ; Ac-Leu-Leu-Arginal)<br />

2 4<br />

A reversible inhibitor of trypsin-like proteases and cysteine proteases.<br />

a 2 -Macroglobulin, Human Plasma 441251 (a 2 M; a 2 MG)<br />

A broad-range irreversible protease inhibitor. Forms “trap” around most<br />

proteases.<br />

DL-2-Mercaptomethyl-3guanidinoethylthiopropanoic<br />

Acid<br />

a -PDX, Human, Recombinant,<br />

E. coli<br />

445825 (Plummer’s <strong>Inhibitor</strong>)<br />

A potent and reversible inhibitor of human plasma carboxypeptidase N<br />

(K i = 2 nM). Also inhibits the hydrolysis of bradykinin.<br />

126850 (a 1 -Antitrypsin Portland)<br />

Recombinant protein derived from the bioengineered human a -antitrypsin<br />

gene fused to a His•Tag® sequence and a FLAG-tag. Contains<br />

a minimal furin consensus sequence, RXXR, that effectively blocks the<br />

furin-dependent processing of protein precursors (K i = 600 pM).<br />

Pepstatin A, Synthetic 516481 (Isovaleryl-Val-Val-4-amino-3-hydroxy-6-methylheptanoyl-Ala-4amino-3-hydroxy-6-methylheptanoic<br />

Acid; Iva-Val-Val-Sta-Ala-Sta)<br />

A reversible inhibitor of aspartic proteases. Inhibits cathepsin D,<br />

pepsin, and renin.<br />

Phenylmethylsulfonyl Fluoride 52332 (Benzylsulfonyl Fluoride; PMSF)<br />

An irreversible inhibitor of serine proteases. Its mechanism of action<br />

is analogous to that of diisopropylfluorophosphate. PMSF causes<br />

sulfonylation of the active-site serine residues.<br />

Phosphoramidon, Disodium Salt 525276 [N-a-Rhamnopyranosyloxyhydroxyphosphinyl)-L-leucyl-L-tryptophan,<br />

2Na]<br />

A highly specific inhibitor of thermolysin. Inhibits the conversion of big<br />

endothelin- to endothelin (IC = 4.6 mM).<br />

50<br />

PPACK, Dihydrochloride 520222 (D-Phe-Pro-Arg-Chloro-methylketone, 2HCl)<br />

A potent and selective inhibitor of thrombin. Specifically alkylates an<br />

active center histidine and thus is classified as an affinity label for<br />

thrombin.<br />

PPACK Dihydrochloride,<br />

Biotinylated<br />

520224 (Biotin-X-D-Phe-Pro-Arg-chloromethylketone, 2HCl)<br />

Biotin-X-analog of Cat. No. 520222. Specific probe for active serine<br />

proteases. Potent inhibitor of thrombin and tissue plasminogen activator<br />

(tPA). Useful for Western blot analyses of Factor VIIa, Factor XIa,<br />

thrombin, and tPA.<br />

mg $366<br />

mg $333<br />

00 mg $2 6<br />

5 mg $29<br />

5 mg<br />

0 mg<br />

25 mg<br />

50 mg<br />

00 mg<br />

mg<br />

0 mg<br />

30 Orders Phone 800 854 34 7<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Fax 800 776 0999<br />

Web www.emdbiosciences.com/calbiochem<br />

$46<br />

$69<br />

$ 37<br />

$238<br />

$394<br />

$73<br />

$487<br />

00 mg $83<br />

2.5 mg $372<br />

5 mg<br />

25 mg<br />

00 mg<br />

g<br />

5 g<br />

25 g<br />

$38<br />

$ 3<br />

$334<br />

$28<br />

$52<br />

$ 56<br />

5 mg $ 44<br />

5 mg<br />

25 mg<br />

$ 48<br />

$504<br />

mg $380<br />

PPACKII, Trifluoroacetate Salt 520219 A potent and irreversible inhibitor of plasma and glandular kallikreins. 0 mg $ 65


Protease <strong>Inhibitor</strong>s, continued<br />

Selection Guide for the Use of Specialized Protease <strong>Inhibitor</strong> Cocktails<br />

Product Cat. No. Recommended Application<br />

Protease <strong>Inhibitor</strong> Cocktail Set I 539 3 General use<br />

Protease <strong>Inhibitor</strong> Cocktail Set I, Animal-Free 535 42 General use (animal-free)<br />

Protease <strong>Inhibitor</strong> Cocktail Set II 539 32 Bacterial cell extracts<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Proteases<br />

Product Cat. No. Comments Size Price<br />

Prolyl Endopeptidase <strong>Inhibitor</strong> II 537011 (Z-PP-CHO)<br />

A cell-permeable dipeptide aldehyde that acts as a specific, potent, slow<br />

and tight-binding transition state analog inhibitor of prolyl endopeptidase<br />

(K = 350 pM and 500 pM for mouse brain and human brain prolyl endo-<br />

i<br />

peptidase, respectively).<br />

TLCK, Hydrochloride 616382 (N a -Tosyl-Lys-Chloromethylketone, HCl)<br />

An irreversible inhibitor of trypsin-like serine proteases. Inactivates<br />

trypsin, specifically and irreversibly. Does not have any significant<br />

inhibitory effect on chymotrypsin.<br />

TPCK 616387 (N a -Tosyl-Phe-Chloromethylketone)<br />

An irreversible inhibitor of chymotrypsin. Useful for inhibiting<br />

chymotrypsin activity in trypsin preparations.<br />

Tripeptidylpeptidase II <strong>Inhibitor</strong> 645905 (H-AAF-CMK, TFA; TPPII <strong>Inhibitor</strong>)<br />

A serine protease inhibitor that acts as a potent, selective, dosedependent,<br />

and irreversible inhibitor of tripeptidylpeptidase II.<br />

Achieves about 80% inhibition of TPPII in vitro at 0 mM.<br />

Protease <strong>Inhibitor</strong> Cocktail Set III, EDTA-Free 539 34 Mammalian cells and tissue extracts, immobilized metal<br />

affinity chromatography<br />

Protease <strong>Inhibitor</strong> Cocktail Set III, Animal-Free 535 40 Mammalian cells and tissue extracts (animal-free)<br />

Protease <strong>Inhibitor</strong> Cocktail Set IV 539 36 Fungal and yeast cell extracts<br />

Protease <strong>Inhibitor</strong> Cocktail Set V, EDTA Free 539 37 Mammalian cells and tissue extracts<br />

Protease <strong>Inhibitor</strong> Cocktail Set V, Animal-Free 535 4 Mammalian cells and tissue extracts (animal-free)<br />

Protease <strong>Inhibitor</strong> Cocktail Set VI 539 33 Plant cell extracts<br />

Protease <strong>Inhibitor</strong> Cocktail Set VII 539 38 Purification of proteins containing His•Tag® sequences<br />

Protease <strong>Inhibitor</strong> Cocktail Set VIII 539 29 Broad range cysteine protease inhibition<br />

Serine Protease <strong>Inhibitor</strong> Cocktail Set I 565000 Broad range serine protease inhibition<br />

5 mg $ 24<br />

50 mg<br />

250 mg<br />

250 mg<br />

g<br />

$38<br />

$ 24<br />

$39<br />

$ 0<br />

5 mg $72<br />

Trypsin <strong>Inhibitor</strong>, Corn 650345 A specific inhibitor of human factor XIIa. mg $209<br />

Trypsin <strong>Inhibitor</strong>, Soybean 65035 A reversible serine protease inhibitor. Inhibits factor Xa, trypsin,<br />

chymotrypsin, kallikrein, and plasmin.<br />

Trypsin <strong>Inhibitor</strong>, Soybean, High<br />

Activity<br />

D-Val-Phe-Lys Chloromethyl<br />

Ketone, Dihydrochloride<br />

650357 A reversible serine protease inhibitor. Inhibits factor Xa, trypsin,<br />

chymotrypsin, kallikrein, and plasmin.<br />

627624 (Plasmin <strong>Inhibitor</strong>, 2HCl)<br />

Selective irreversible inhibitor of plasmin with high selectivity for<br />

plasmin over urokinase.<br />

00 mg<br />

g<br />

00 mg<br />

250 mg<br />

$55<br />

$273<br />

$70<br />

$ 53<br />

5 mg $ 35<br />

Technical Support<br />

Phone 800 628 8470<br />

E-mail calbiochem@emdbiosciences.com<br />

3


Proteases<br />

Protease <strong>Inhibitor</strong> Cocktails<br />

Protease <strong>Inhibitor</strong> Cocktail Set I<br />

A cocktail containing five protease inhibitors that will inhibit a broad range of proteases. Reconstitute each vial with ml<br />

H 2 O to obtain a 00x stock solution. When diluted, x stock solution contains the indicated amount of inhibitors.<br />

Cat. No. 539131 1 vial $28<br />

10 vials $202<br />

Protease <strong>Inhibitor</strong> Cat. No. 1x Concentration Target Protease<br />

AEBSF, Hydrochloride 101500 500 mM Serine Proteases<br />

Aprotinin, Bovine Lung,<br />

Crystalline<br />

619370 50 nM Serine Proteases and Esterases<br />

E-64 Protease <strong>Inhibitor</strong> 324890 mM Cysteine Proteases<br />

EDTA, Disodium 324503 500 mM Metalloproteases<br />

Leupeptin, Hemisulfate 108975 mM Cysteine Proteases and Trypsin-like Proteases<br />

Protease <strong>Inhibitor</strong> Cocktail Set II<br />

This cocktail is recommended for use with bacterial cell extracts. Cocktail contains five protease inhibitors with broad<br />

specificity for the inhibition of aspartic, cysteine, serine, and metalloproteases as well as aminopeptidases. Reconstitute<br />

each vial with ml DMSO and 4 ml H 2 O to obtain a 5 ml stock solution. When reconstituted, each vial will contain the<br />

following amount of inhibitors. Note: set = vial of lyophilized protease inhibitor cocktail and vial DMSO, ml.<br />

Cat. No. 539132 1 set $75<br />

5 sets $296<br />

Protease <strong>Inhibitor</strong> Cat. No. Concentration in<br />

the Vial<br />

Target Protease<br />

AEBSF, Hydrochloride 101500 20 mM Serine Proteases<br />

Bestatin 200484 .7 mM Aminopeptidase B and Leucine Aminopeptidase<br />

E-64 Protease <strong>Inhibitor</strong> 324890 200 mM Cysteine Proteases<br />

EDTA, Disodium 324503 500 mM Metalloproteases<br />

Pepstatin A 516481 2 mM Aspartic Proteases<br />

Protease <strong>Inhibitor</strong> Cocktail Set III<br />

This cocktail is recommended for use with mammalian cells and tissue extracts. Cocktail contains six protease inhibitors<br />

(in ml of DMSO) with broad specificity for the inhibition of aspartic, cysteine, and serine proteases as well as aminopeptidases.<br />

Each vial contains the following amount of inhibitors. One ml is sufficient for 20 g of tissue.<br />

Cat. No. 539134 1 ml $57<br />

1 set $248<br />

Protease <strong>Inhibitor</strong> Cat. No. Concentration in<br />

the Vial<br />

Target Protease<br />

AEBSF, Hydrochloride 101500 00 mM Serine Proteases<br />

Aprotinin, Bovine Lung,<br />

Crystalline<br />

616370 80 mM Broad Spectrum, Serine Proteases<br />

Bestatin 200484 5 mM Aminopeptidase B and Leucine Aminopeptidase<br />

E-64 Protease <strong>Inhibitor</strong> 324890 .5 mM Cysteine Proteases<br />

Leupeptin, Hemisulfate 108975 2 mM Cysteine Proteases and Trypsin-like Proteases<br />

Pepstatin A 516481 mM Aspartic Proteases<br />

32 Orders Phone 800 854 34 7<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Fax 800 776 0999<br />

Web www.emdbiosciences.com/calbiochem


Protease <strong>Inhibitor</strong> Cocktails, continued<br />

Protease <strong>Inhibitor</strong> Cocktail Set IV<br />

This cocktail is recommended for fungal and yeast cell extracts. Cocktail contains four protease inhibitors (in ml of<br />

DMSO) with broad specificity for the inhibition of aspartic-, cysteine-, metallo-, and serine-proteases. Each vial contains<br />

the following amount of inhibitors.<br />

Cat. No. 539136 1 ml $52<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

1 set $190<br />

Protease <strong>Inhibitor</strong> Cat. No. Concentration in the Vial Target Protease<br />

AEBSF, Hydrochloride 101500 00 mM Serine Proteases<br />

E-64 Protease <strong>Inhibitor</strong> 324890 .5 mM Cysteine Proteases<br />

Pepstatin A 516481 2 mM Aspartic Proteases<br />

o-Phenanthroline 516705 500 mM Metalloproteases<br />

Protease <strong>Inhibitor</strong> Cocktail Set V, EDTA-Free<br />

$ 90<br />

$52<br />

A cocktail containing four protease inhibitors for the inhibition of serine, cysteine, but not metalloproteases.<br />

Reconstitute each vial with ml H O to obtain a 00x stock solution. When diluted to x stock solution, the set will contain<br />

2<br />

the following amount of inhibitors.<br />

Cat. No. 539137 10 vials $203<br />

Protease <strong>Inhibitor</strong> Cat. No. 1X Concentration Target Protease<br />

AEBSF, Hydrochloride 101500 500 mM Serine Proteases<br />

Aprotinin, Bovine Lung,<br />

Crystalline<br />

616370 50 nM Broad-Spectrum, Serine Proteases<br />

E-64 Protease <strong>Inhibitor</strong> 324890 mM Cysteine Proteases<br />

Leupeptin, Hemisulfate 108975 mM Cysteine Proteases and Trypsin-like Proteases<br />

Protease <strong>Inhibitor</strong> Cocktail Set VI<br />

A cocktail of six protease inhibitors with broad specificity for the inhibition of aspartic, cysteine, serine, and metalloproteases<br />

as well as aminopeptidases. This cocktail is recommended for use with plant cell extracts.<br />

Cat. No. 539133 1 ml $62<br />

1 set (5 x 1 ml) $267<br />

Protease <strong>Inhibitor</strong> Cat. No. Concentration in the Vial Target Protease<br />

AEBSF, Hydrochloride 101500 200 mM Serine Proteases<br />

Bestatin 200484 0 mM Aminopeptidase B and Leucine Aminopeptidase<br />

E-64 Protease <strong>Inhibitor</strong> 324890 3 mM Cysteine Proteases<br />

Leupeptin, Hemisulfate 108975 2 mM Cysteine Proteases and Trypsin-like Proteases<br />

o-Phenanthroline 516705 500 mM Metalloproteases<br />

Pepstatin A 516481 2 mM Aspartic Proteases<br />

Proteases<br />

Technical Support<br />

Phone 800 628 8470<br />

E-mail calbiochem@emdbiosciences.com<br />

33


Proteases<br />

Protease <strong>Inhibitor</strong> Cocktails, continued<br />

Protease <strong>Inhibitor</strong> Cocktail Set VII<br />

This cocktail is recommended for purification of proteins containing His•Tag® sequences. Cocktail contains five protease<br />

inhibitors (in ml DMSO) with broad specificity for the inhibition of cysteine, serine, aspartic, and thermolysinlike<br />

proteases and aminopeptidases. One ml is recommended for the inhibition of proteases in 0 g cells.<br />

Cat. No. 539138 1 ml $62<br />

1 set (5 x 1 ml) $267<br />

Protease <strong>Inhibitor</strong> Cat. No. Mol. Wt. Concentration in the Vial Target Protease<br />

AEBSF, Hydrochloride 101500 239.5 00 mM Serine Proteases<br />

Bestatin 200484 308.4 5 mM Aminopeptidase B and Leucine<br />

Aminopeptidase<br />

E-64 Protease <strong>Inhibitor</strong> 324890 357.4 .5 mM Cysteine Proteases<br />

Pepstatin A 516482 685.9 2 mM Aspartic Proteases<br />

Phosphoramidon 525276 587.5 200 mM Metalloendopeptidases<br />

Protease <strong>Inhibitor</strong> Cocktail Set VIII<br />

A DMSO solution of three protease inhibitors with selective specificity for the inhibition of cysteine proteases,<br />

including calpains, cathepsins, and papain.<br />

Cat. No. 539129 1 ml $63<br />

1 set (5 x 1 ml) $268<br />

Protease <strong>Inhibitor</strong> Cat. No. Mol. Wt. Concentration in the Vial Target Protease<br />

ALLN 208719 383.5 .56 mM Calpain I/II, Cathepsin B,<br />

Cathepsin L, Cysteine Proteases<br />

Cathepsin <strong>Inhibitor</strong> I 219415 475.5 500 mM Cathepsin B, Cathepsin L,<br />

Cathepsin S, Papain<br />

E-64 Protease <strong>Inhibitor</strong> 324890 357.4 .5 mM Cysteine Proteases<br />

Protease Arrest Reagent<br />

An optimized concentration of various reversible and irreversible<br />

inhibitors to inhibit serine, cysteine, and calpain proteases. Suitable for<br />

the protection of proteins purified from animal tissues, plant tissues,<br />

yeast, and bacteria. Protease Arrest Reagent is provided as a 50x<br />

solution that when diluted in extraction buffer at pH 7.0 to 8.0 inhibits<br />

95-98% of protease activity. EDTA is also provided separately to inhibit<br />

metalloproteinases.<br />

Cat. No. 539124 1 set $150<br />

Protease <strong>Inhibitor</strong> Set<br />

A set of 6 vials. Each set contains 50 mg of AEBSF, HCl (Cat. No.<br />

0 500), mg of E-64 (Cat. No. 324890), mg of EST (E-64d; Cat. No.<br />

330005), 5 mg of Leupeptin, Hemisulfate (Cat. No. 08975), 5 mg of<br />

Pepstatin A (Cat. No. 5 6482), 50 mg of TLCK, HCl (Cat. No. 6 6382),<br />

and 250 mg of TPCK (Cat. No. 6 6387).<br />

Cat. No. 539128 1 set $274<br />

Serine Protease <strong>Inhibitor</strong> Cocktail Set I<br />

A cocktail of four protease inhibitors that is useful for inhibition of a<br />

broad range of serine proteases. Reconstitute each vial with ml of<br />

H 2 O to obtain a 00x stock solution. x stock solution contains<br />

500 mM AEBSF, HCl (Cat. No. 0 500), 420 nM Aprotinin (Cat. No.<br />

6 6370), 20 mM Elastatinal (Cat. No. 32469 ), and mM GGACK (Cat.<br />

No. 347436).<br />

Cat. No. 565000 1 vial<br />

5 vials<br />

34 Orders Phone 800 854 34 7<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Fax 800 776 0999<br />

Web www.emdbiosciences.com/calbiochem<br />

$60<br />

$239


N Animal-Free Protease <strong>Inhibitor</strong> Cocktail Sets<br />

Protease <strong>Inhibitor</strong> Cocktail Set I,<br />

Animal-Free<br />

A cocktail of five protease inhibitors for the inhibition of a broad<br />

range of proteases and esterases. Each vial, when reconstituted with<br />

ml H 2 O, yields a 00X stock solution. When diluted to X the cocktail<br />

contains 500 mM AEBSF, HCl (Cat. No. 0 500), 50 nM Aprotinin,<br />

recombinant (Cat. No. 6 637 ), mM E-64 (Cat. No. 324890),<br />

500 mM EDTA, Disodium Salt and mM Leupeptin Hemisulfate (Cat. No.<br />

08975). Available as ml vial or as a set of 0 x ml.<br />

Cat. No. 535142 1 ml<br />

1 set<br />

Protease <strong>Inhibitor</strong> Cocktail Set III,<br />

Animal-Free<br />

A cocktail of six protease inhibitors with broad specificity for<br />

the inhibition of aspartic, cysteine, and serine proteases as well as<br />

aminopeptidases. This cocktail is recommended for use with<br />

mammalian cell and tissue extracts. Each vial contains 00 mM AEBSF,<br />

HCl (Cat. No. 0 500), 80 mM Aprotinin, Recombinant (Cat. No. 6 637 ),<br />

5 mM Bestatin (Cat. No. 200484), .5 mM E-64 (Cat. No. 324890), 2 mM<br />

Leupeptin Hemisulfate (Cat. No. 08975), and mM Pepstatin A<br />

(Cat. No. 5 6482). Available as ml vial or a set of 5 x ml.<br />

Cat. No. 535140 1 ml<br />

1 set<br />

Protease <strong>Inhibitor</strong> Cocktail Set V,<br />

Animal-Free<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

$28<br />

$202<br />

$57<br />

$245<br />

A cocktail of four protease inhibitors for the inhibition of serine<br />

and cysteine proteases, but not metalloproteases. Each vial, when<br />

reconstituted with ml H 2 O, will yield a 00X stock solution.<br />

When diluted to X the cocktail contains 500 mM AEBSF, HCl<br />

(Cat. No. 0 500), 50 nM Aprotinin, recombinant (Cat. No. 6 637 ),<br />

mM E-64 (Cat. No. 324890), and mM Leupeptin Hemisulfate (Cat. No.<br />

08975). Available as ml vial or set of 0 x ml.<br />

Cat. No. 535141 1 ml<br />

1 set<br />

$57<br />

$245<br />

Now with<br />

FAQs<br />

Proteases<br />

Technical Support<br />

Phone 800 628 8470<br />

E-mail calbiochem@emdbiosciences.com<br />

35


Proteases<br />

Proteasome and Ubiquitination <strong>Inhibitor</strong>s<br />

Proteasomes are large multi-subunit complexes,<br />

localized in the nucleus and cytosol that selectively<br />

degrade intracellular proteins. A protein marked for<br />

degradation is covalently attached to multiple molecules<br />

of ubiquitin (Ubq). Four or more Ubq are required to<br />

set a protein for degradation by the proteasome. Ubq<br />

is a highly conserved 76-amino acid (8.6 kDa) protein,<br />

which escorts proteins for rapid hydrolysis to the multicomponent<br />

enzymatic complex, the 26S proteasome. The<br />

proteolytic core of this complex, the 20S proteasome,<br />

contains multiple peptidase activities and functions<br />

as the catalytic machine. This core is composed of 28<br />

subunits arranged in four heptameric, tightly stacked,<br />

rings (a 7 , b 7 , b 7 , a 7 ) to form a cylindrical structure. The<br />

a-subunits make up the two outer and the b-subunits the<br />

two inner rings of the stack. The entrance of substrate<br />

proteins to the active site of the complex is guarded<br />

by the a-subunits that allow access only to unfolded<br />

and extended polypeptides. The proteolytic activity is<br />

confined to the b-subunits. The 19S complex “caps” at<br />

each end of the 20S proteasome help in unfolding protein<br />

substrates. The 19S cap contains subunits with ATPase<br />

activity, subunits that recognize and bind polyubiquitin<br />

chains and putative unfoldases that unfold protein<br />

chains and translocate them into the 20S proteasome.<br />

In the Ubq-proteosome degradation pathway, Ubq is<br />

first covalently ligated to target proteins by a multienzymatic<br />

system consisting of Ubq-activating (E1),<br />

Ubq-conjugating (E2), and the Ubq-ligating (E3)<br />

enzymes. The E1 activates a Ubq monomer at its Cterminal<br />

cysteine residue to a high-energy thioester<br />

bond which is then transferred to a reactive cysteine<br />

residue of the E2 enzyme. The final transfer of Ubq<br />

to the h-amino group of a reactive lysine residue of<br />

substrate proteins is brought about by the E3 enzyme.<br />

Ubiquitinated protein is then escorted to the 26S<br />

proteasome where it undergoes final degradation and<br />

the ubiquitin is released and recycled. The ubiquitinproteasome<br />

system plays a major role in the degradation<br />

of many proteins involved in cell cycle, proliferation,<br />

and apoptosis. Proteasomes also breakdown abnormal<br />

proteins that result from oxidative stress and<br />

mutations that might otherwise disrupt normal cellular<br />

homeostasis. This pathway has been implicated in<br />

several forms of malignancy, in the pathogenesis of<br />

several genetic diseases, and in the pathology of muscle<br />

wasting. It is also involved in the destruction of proteins<br />

that participate in cell cycle progression, transcription<br />

control, signal transduction, and metabolic regulation.<br />

Several distinct groups of compounds, designed to act as<br />

selective proteasome inhibitors, have helped immensely<br />

in understanding the biological role and importance of<br />

the ubiquitin-proteasome pathway. These compounds are<br />

designed to block proteasome function in cancer cells<br />

without significantly affecting biological processes in<br />

the normal cell.<br />

References:<br />

Spano, J.P. et al. 2005, Bull. Cancer 92, 945.<br />

Mistiades, C.S. et al. 2005. Essays Biochem. 41, 205.<br />

Magill, L., et al. 2003. Hematology 8, 275.<br />

Voorhees, P.M., et al. 2003. Clin. Cancer Res. 9, 63 6.<br />

Kroll, M., et al. 999. J. Biol. Chem. 274, 794 .<br />

Koegl, M., et al. 999. Cell 96, 635.<br />

Schwartz, A.L., and Ciechanover, A. 999. Annu. Rev. Med. 50, 57.<br />

Gerards, W.L.H., et al. 998. Cell. Mol. Life Sci. 54, 253.<br />

Spataro, V., et al. 998. Br. J. Cancer 77, 448.<br />

Jensen, D.E., et al. 998. Oncogene 16, 097.<br />

Pickart, C.M. 997. FASEB J. 11, 055.<br />

Bogyo, M., et al. 997. Biopolymers 43, 269.<br />

Coux, O., et al. 996. Annu. Rev. Biochem. 65, 80 .<br />

Maupin-Furlow, J.A., and Ferry, J.G. 995. J. Biol. Chem. 270, 286 7.<br />

Jensen, T.J., et al. 995. Cell 83, 29.<br />

Ciechanover, A. 994. Cell 79, 3.<br />

More online... www.calbiochem.com/inhibitors/Ubq<br />

36 Orders Phone 800 854 34 7<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Fax 800 776 0999<br />

Web www.emdbiosciences.com/calbiochem


Proteasome and Ubiquitination Pathway <strong>Inhibitor</strong>s<br />

Product Cat. No.<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Proteases<br />

Cellpermeable?<br />

Reversible? Comments Size Price<br />

AdaAhX 3 L 3 VS 114802 Yes No Inhibits chymotrypsin-like (IC 50 = 0.05–0.0 mM), trypsinlike<br />

(IC 50 = .0–5.0 mM), and PGPH (IC 50 = 0.5– .0 mM)<br />

activities of the 20S proteasome.<br />

AdaLys(bio)AhX 3 L 3 VS 114803 Yes No Inhibits chymotrypsin-like (IC 50 = 0.05–0. mM), trypsinlike<br />

(IC 50 = 5.0– 0.0 mM), and PGPH (IC 50 = 2.0–5.0 mM)<br />

activities of the 20S proteasome in living cells. Useful for<br />

the detection of catalytic b-subunits of both constitutive<br />

proteasome and immunoproteasome through Western<br />

blotting.<br />

ALLN<br />

(Calpain <strong>Inhibitor</strong> I)<br />

208719 Yes Yes Inhibits chymotrypsin-like activity of the proteasome<br />

(K i = 5.7 mM). Also inhibits calpain I, calpain II, cathepsin B,<br />

and cathepsin L.<br />

Epoxomicin, Synthetic 324800 Yes No Inhibits chymotrypsin-like, trypsin-like and peptidylglutamyl<br />

peptide hydrolyzing (PGPH) activities of the proteasome.<br />

N InSolution Epoxomicin,<br />

Synthetic<br />

324801 Yes No A mM (50 mg/90 ml) solution of Epoxomicin, Synthetic<br />

(Cat. No. 324800) in DMSO.<br />

Hdm2 E3 Ligase <strong>Inhibitor</strong> 373225 Yes Yes A cell-permeable, reversible inhibitor of hdm2 E3 ligase<br />

that is shown to block hdm2-mediated ubiquitination of<br />

p53 (IC 50 = 2.7 mM using Ub-Ubc4 as the donor substrate).<br />

The inhibition is non-competitive with respect to either the<br />

donor or acceptor substrate.<br />

Lactacystin, Synthetic 426100 Yes No A potent and selective proteasome inhibitor. Inhibits the<br />

chymotryptic-and tryptic-like peptidase activities of<br />

proteasomes. Also inhibits cathepsin A.<br />

clasto-Lactacystin-blactone<br />

426102 Yes No A potent and selective proteasome inhibitor. Inhibits the<br />

chymotrypsin and trypsin-like peptidase activities of<br />

proteasomes. Also inhibits cathepsin A.<br />

a-Methylomuralide 426104 Yes No An a-methyl analog of clasto-Lactacystin b Lactone (Omuralide,<br />

Cat. No. 426 02) that displays improved hydrolytic<br />

stability. Reported to be a potent, selective, and irreversible<br />

inhibitor of proteasome function (k inact chymotrypsin-like<br />

peptidase activity of purified 20S proteasome from bovine<br />

brain = 2300 M - s - for a-Methylomuralide vs. 3060 M - s -<br />

for Omuralide).<br />

MG- 5<br />

(Z-LLNva-CHO)<br />

MG- 32<br />

(Z-LLL-CHO)<br />

474780 Yes Yes Potent proteasome inhibitor (IC 50 = 2 nM and 35 nM<br />

for 20S and 26S proteasomes, respectively). Inhibits<br />

chymotrypsin-like activity of the proteasomes.<br />

474790 Yes Yes Inhibits chymotrypsin-like activity of the proteasomes<br />

(K i = 4 nM).<br />

InSolution MG- 32 474791 Yes Yes Supplied as a 0 mM ( mg / 2 0 ml) solution of MG- 32<br />

(Cat. No. 474790) in anhydrous DMSO.<br />

NLVS 482240 Yes No Inhibits chymotrypsin-like, trypsin-like, and peptidylglutamyl-peptidase<br />

activities of proteasomes.<br />

NP-LLL-VS 492025 Yes No An intermediate that can be used to prepare radiolabeled<br />

25 I–NIP–L3 VS for proteasome inhibition studies. NIP-L 3 VS<br />

acts by covalently modifying the active site threonine of<br />

the catalytic b-subunit of the proteasome.<br />

Proteasome <strong>Inhibitor</strong> I<br />

(PSI)<br />

250 mg $207<br />

250 mg $207<br />

5 mg<br />

25 mg<br />

$48<br />

$ 72<br />

00 mg $ 84<br />

50 mg $ 0<br />

5 mg $73<br />

200 mg $237<br />

00 mg $ 98<br />

00 mg $20<br />

5 mg $ 43<br />

mg<br />

5 mg<br />

$34<br />

$98<br />

mg $39<br />

500 mg $227<br />

500 mg $ 96<br />

539160 Yes Yes Inhibits chymotrypsin-like activity of the proteasome. mg<br />

5 mg<br />

$68<br />

$202<br />

Technical Support<br />

Phone 800 628 8470<br />

E-mail calbiochem@emdbiosciences.com<br />

37


Proteases<br />

Proteasome and Ubiquitination <strong>Inhibitor</strong>s, continued<br />

Product Cat. No.<br />

N InSolution Proteasome<br />

<strong>Inhibitor</strong> I<br />

Proteasome <strong>Inhibitor</strong> II<br />

(Z-LLF-CHO)<br />

Proteasome <strong>Inhibitor</strong> III<br />

[Z-LLL-B(OH) 2 ]<br />

Proteasome <strong>Inhibitor</strong> IV<br />

(Z-GPFL-CHO)<br />

N Proteasome <strong>Inhibitor</strong> VII,<br />

Antiprotealide<br />

Cellpermeable?<br />

Reversible? Comments Size Price<br />

539161 Yes Yes A 50 mM (5 mg/ 62 ml) solution of Proteasome <strong>Inhibitor</strong> I<br />

(Cat. No. 539 60) in DMSO.<br />

539162 Yes Yes Inhibits chymotrypsin-like activity of the proteasomes<br />

(K i = 460 nM).<br />

539163 Yes Yes Inhibits chymotrypsin-like activity of the proteasomes<br />

(K i = 30 nM).<br />

539175 Yes Yes K i s = .5 mM for branched chain amino acid preferring,<br />

2.3 mM for small neutral amino acid preferring, and 40.5<br />

mM for chymotrypsin-like activities; IC 50 = 3. mM for PGPH<br />

activity. Only weakly inhibits trypsin-like proteasomal<br />

activity.<br />

539179 Yes No An Omuralide-Salinosporamide hybrid that irreversibly<br />

inactivates the b5-subunit of the human 20S proteasome.<br />

Shown to be ~2.5-fold more potent than Omuralide (Cat. No.<br />

426 02) and somewhat less potent than Salinosporamide A.<br />

Ro 06-9920 557550 Yes No A highly selective, irreversible inhibitor of IkBaee ubiquitination<br />

(IC 50 = 2.3 mM). Blocks NF-kB-dependent cytokine<br />

expression in human PBMNs (IC 50 ~700 nM for TNF-a,<br />

IL- b, and IL-6 inhibition) and rats.<br />

Ro 06-9920, Control 557551 Yes — A negative control compound for Ro 06-9920 (Cat. No.<br />

557550) (IkBaee ubiquitination IC 50 >80 mM).<br />

Tyropeptin A, Synthetic 657008 Yes Yes <strong>Inhibitor</strong> of chymotrypsin-like (IC 50 = 00 ng/ml) and trypsin-like<br />

(IC 50 = .5 mg/ml) activities of the proteasome. No<br />

effect on PGPH activity even at a concentration of<br />

00 mg/ml.<br />

Ubiquitin Aldehyde 662056 No Yes Potent and specific inhibitor of multiple ubiquitin<br />

hydrolases involved in pathways of intracellular protein<br />

modification and turnover.<br />

UCH-L <strong>Inhibitor</strong> 662086 Yes Yes A potent, reversible, competitive, and active site-directed<br />

inhibitor of UCH-L (K i = 400 nM; IC 50 = 880 nM) with<br />

~28-fold greater selectivity over UCH-L3 (Cat. No. 662090).<br />

UCH-L3 <strong>Inhibitor</strong> 662089 Yes No A selective and potent inhibitor of UCH-L3 (IC 50 =600 nM) with<br />

~ 25-fold greater selectivity over UCH-L (IC 50 = 75 mM).<br />

Proteasome <strong>Inhibitor</strong> Set I<br />

A set of three vials. Each set contains mg of Proteasome <strong>Inhibitor</strong> I<br />

(Cat. No. 539 60), 200 mg of Lactacystin (Cat. No. 426 00), and mg<br />

of MG- 32 (Cat. No. 474790).<br />

Cat. No. 539164 1 set $299<br />

Proteasome <strong>Inhibitor</strong> Set II<br />

A set of three vials. Each set contains 5 mg of ALLN (Cat. No. 2087 9),<br />

00 mg each of Epoxomicin (Cat. No. 324800), and clasto-Lactacystin<br />

b-Lactone (Cat. No. 426 02).<br />

Cat. No. 539165 1 set $313<br />

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Transmembrane receptors of various hormones are<br />

coupled to adenylate cyclase (AC) via heterotrimeric<br />

G-proteins. Ligand binding to the receptor changes the<br />

receptor conformation, allowing it to associate with a<br />

G-protein. This results in the activation of the specific<br />

G-protein via exchange of GTP for GDP bound to the asubunit<br />

of the G-protein. The activated G-protein in turn<br />

activates AC resulting in the conversion of ATP to cAMP.<br />

cAMP then acts to regulate a wide variety of cellular<br />

processes. AC can couple with both the stimulatory and<br />

inhibitory G-proteins (G s and G i ). Interaction with G s<br />

stimulates its activity and interaction with G i inhibits its<br />

enzymatic activity.<br />

At least nine different isoforms of AC have been<br />

reported that differ in their regulatory properties and<br />

are differentially expressed in various tissues. They<br />

are integral membrane proteins that are composed of<br />

two cytoplasmic domains and two membrane-spanning<br />

domains, each of which contains six transmembrane<br />

spans. The amino acid sequence of each cytoplasmic<br />

domain, which is thought to contain a nucleotide (ATP)<br />

binding site, is well conserved among the various<br />

subtypes. Although ACs can exist in both particulate<br />

and soluble forms, the particulate form is more<br />

prevalent in mammals. Based on the conservation<br />

of their catalytic domains, three classes of ACs are<br />

described: class I-ACs are found in Gram-negative<br />

facultative anaerobes, such as E. coli; class II-“toxic'<br />

ACs, including calmodulin (CaM)-activated ACs<br />

are found in pathogenic bacteria, such as Bordetella<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Other <strong>Inhibitor</strong>s of Biological Interest<br />

Other <strong>Inhibitor</strong>s of Biological Interest<br />

Adenylate Cyclase <strong>Inhibitor</strong>s<br />

Adenylate Cyclase <strong>Inhibitor</strong>s<br />

pertussis and Bacillus anthracis; and class III-ACs are<br />

found in a wide variety of organisms ranging from<br />

bacteria to human. Class III-AC also include nine<br />

isoforms found in mammals, which are designated AC-<br />

1 to AC-9. These nine isoforms are stimulated by the<br />

a-subunit of G s -protein and by forskolin. ACs are also<br />

capable of receiving signals from a variety of other<br />

sources, such as G i -a, protein kinase A, C, CaM kinase,<br />

and Ca 2+ /CaM. Hormonal activation of CaM-dependent<br />

adenylate cyclase occurs at very low Ca 2+ levels. The<br />

activity of AC is inhibited by high levels of Ca 2+ , which<br />

also activates CaM-dependent phosphodiesterase.<br />

References:<br />

Insel, P.A., and Ostrom, R.S. 2003. Cell. Mol. Neurobiol. 23, 305.<br />

Cui, H., and Green, R. D. 200 . Biochem. Biophys. Res. Comm. 283, 07.<br />

Schwartz, J.H. 200 . Proc. Natl. Acad. Sci. USA 98, 3482.<br />

Sunahara, R.K., et al. 996. Annu. Rev. Pharmacol. Toxicol. 36, 46 .<br />

MacNeil, S., et al. 985. Cell Calcium 6, 2 3.<br />

Product Cat. No. Comments Size Price<br />

Adenylyl Cyclase Toxins <strong>Inhibitor</strong> 116845 (Ethyl-5-aminopyrazolo[1,5-a]quinazoline-3-carboxylate)<br />

A cell-permeable inhibitor of adenylate cyclase (IC 50 = 90 mM).<br />

Adenylyl Cyclase Type V <strong>Inhibitor</strong>,<br />

NKY80<br />

More online... www.calbiochem.com/inhibitors/AC<br />

116850 [2-Amino-7-(furanyl)-7,8-dihydro-5(6H)-quinazolinone]<br />

A cell-permeable, potent and selective inhibitor of adenylyl cyclase<br />

(AC) type V isoform (IC 50 = 8 .3 mM, 32 mM and .7 mM for type V,<br />

III, and II, respectively) in the presence of Gsx GTPrs-Forskolin.<br />

Angiotensin II, Human 05-23-0101 (DRVYIHPF)<br />

An inhibitor of adenylate cyclase activity in spontaneously<br />

hypertensive rats.<br />

2',5'-Dideoxyadenosine 288104 (2',5'-dd-Ado)<br />

A cell-permeable, non-competitive inhibitor of adenylate cyclase<br />

(IC 50 = 3 mM). Binds to the adenosine binding site.<br />

0 mg $ 00<br />

5 mg<br />

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39


Other <strong>Inhibitor</strong>s of Biological Interest<br />

Adenylate Cyclase <strong>Inhibitor</strong>s, continued<br />

Product Cat. No. Comments Size Price<br />

InSolution MANT-GppNHp 444168 {mant-GMPPNP; 2´/3´-O-(N-Methylanthraniloyl)-guanosine-<br />

5´-[(b,g)-imido]triphosphate, Triethylammonium Salt; 2´/3´-O-<br />

(N-Methylanthraniloyl)-b,g-imidoguanosine-5´-triphosphate,<br />

Triethylammonium Salt}<br />

Acts as a potent, competitive inhibitor of adenylyl cyclase<br />

(AC; K i = 6 nM and 55 nM in forskolin/Mn 2+ -stimulated AC in<br />

S49 cyc - membranes and insect cell membranes, respectively).<br />

Supplied as a 5 mM solution in H 2 O.<br />

InSolution MANT-GTPgS 444169 [2´/3´-O-(N-Methylanthraniloyl)-guanosine-5´-(g-thio)triphosphate,<br />

Triethylammonium Salt; 2´/3´-O-(N-Methylanthraniloyl)-gthioguanosine-5´-triphosphate,<br />

Triethylammonium Salt; mGTPgS]<br />

Acts as a potent, competitive inhibitor of adenylyl cyclase<br />

(AC; K i = 53 nM in forskolin/Mn 2+ -stimulated AC in S49 cyc -<br />

membranes). Supplied as a 5 mM solution in H 2 O.<br />

MDL- 2,330A, Hydrochloride 444200 [cis-N-(2-Phenylcyclopentyl)azacyclotridec-1-en-2-amine, HCl]<br />

A cell-permeable, irreversible inhibitor of adenylate cyclase<br />

(IC 50 = 250 mM).<br />

50 ml $220<br />

50 ml $220<br />

mg $38<br />

Melittin 444605 Inhibits adenylyl cyclase activity in synaptic membranes. 250 mg $67<br />

SQ 22536 568500 [9-(Tetrahydro-2´-furyl)adenine]<br />

A cell-permeable adenylate cyclase inhibitor. Blocks PTH-stimulated<br />

AC activity (IC 50 = 200 mM).<br />

5 mg $ 0<br />

40 Orders Phone 800 854 34 7<br />

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Angiotensin-Converting Enzyme (ACE) <strong>Inhibitor</strong>s<br />

The renin-angiotensin system plays an important role in<br />

electrolyte balance and fluid regulation. ACE inhibitors<br />

have become important clinical tools in the management<br />

of hypertension. They block the activation of the<br />

renin-aldosterone system, thereby reducing peripheral<br />

Angiotensin-Converting Enzyme (ACE) <strong>Inhibitor</strong>s<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Other <strong>Inhibitor</strong>s of Biological Interest<br />

vascular resistance. ACE inhibitors also improve<br />

myocardial oxygen consumption and cardiac output and<br />

moderate left ventricular and vascular hypertrophy.<br />

Product Cat. No. Comments Size Price<br />

Captopril 211875 ([2S]-1-[3-Mercapto-2-methylpropionyl]-L-proline; SQ-14225)<br />

A competitive inhibitor of angiotensin converting enzyme<br />

(IC 50 = 23–35 nM).<br />

TAPI-2 579052 {N-(R)-[2-(Hydroxyaminocarbonyl)methyl]-4-methylpentanoyl-L-tbutyl-alanyl-L-alanine,<br />

2-aminoethyl Amide; TNF-a Protease <strong>Inhibitor</strong>-<br />

2}<br />

ATPase <strong>Inhibitor</strong>s<br />

ATPase <strong>Inhibitor</strong>s<br />

A hydroxamate-based inhibitor of MMPs and TACE. Also acts as a<br />

weak inhibitor of angiotensin converting enzyme (IC 50 = 8 mM).<br />

DL-Thiorphan 598510 N-[(RS)-2-Benzyl-3-mercaptopropanoyl]-glycine<br />

A thiol containing amido-acid that selectively binds to the active site<br />

zinc of metalloproteinases and blocks their activity (IC 50 = 2. nM<br />

for neutral endopeptidase-NEP). Reported to inhibit the activity of<br />

angiotensin-converting enzyme (ACE) at much higher concentrations<br />

(IC 50 = 4 mM); however, it does not affect the activity of endothelinconverting<br />

enzyme.<br />

Aromatase <strong>Inhibitor</strong>s<br />

Aromatase <strong>Inhibitor</strong>s<br />

More online... www.calbiochem.com/inhibitors/ACE<br />

g $44<br />

mg $262<br />

0 mg $ 95<br />

Product Cat. No. Comments Size Price<br />

Aromatase <strong>Inhibitor</strong> I 182540 A potent, competitive, nonsteroidal inhibitor of aromatase (P450arom; IC 50 = 40 nM for<br />

human aromatase). Reported to be more potent than fadrozole in inhibiting aromatase<br />

activity. Does not significantly inhibit 7a-hydroxylase.<br />

More online... www.calbiochem.com/inhibitors/ATPase<br />

Product Cat. No. Comments Size Price<br />

Adenosine 1160 Exerts a biphasic effect on Ca 2+ - Mg 2+ -ATPase activity. Inhibits the<br />

activity at ~ 00 nM levels.<br />

Amiloride, Hydrochloride 129876 A potent and specific inhibitor of trans-membrane Na + entry and<br />

Na + /K + ATPase. Diminishes the urinary transepithelial potential<br />

difference and short-circuit current (IC 50 = 300 nM).<br />

Atrial Natriuretic Factor -28, Rat 05-23-0301 (rANF; SLRRSSCFGGRIDRIGAQSGLGCNSFRY)<br />

Reduces the activity of Na + -K + -ATPase in rat kidney and activates<br />

neuronal guanylate cyclase.<br />

0 g<br />

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00 mg $4<br />

00 mg $57<br />

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4


Other <strong>Inhibitor</strong>s of Biological Interest<br />

ATPase <strong>Inhibitor</strong>s, continued<br />

Product Cat. No. Comments Size Price<br />

Bafilomycin A , Streptomyces<br />

griseus<br />

196000 A specific inhibitor of vacuolar-type H + -ATPase (V-type; K i = 500 pM)<br />

and serves as a valuable tool for distinguishing among different types<br />

of ATPases.<br />

BHQ 286888 [t-BuBHQ; 2,5-Di-(t-butyl)-1,4-hydroquinone]<br />

Mobilizes Ca 2+ from the IP 3 -sensitive stores by inhibiting microsomal<br />

and sarcoplasmic reticulum Ca 2+ -ATPase activity. Blocks the<br />

formation of prostaglandin E2 and prostacyclin (IC 50 = 0.5– .0 mM).<br />

(±)-Blebbistatin 203390 A cell-permeable, selective, potent, and reversible inhibitor of nonmuscle<br />

myosin II. Inhibits the ATPase and gliding motility of human<br />

platelets (≤ 00 mM).<br />

N InSolution Blebbistatin, Racemic 203389 A 50 mM (5 mg/342 ml) solution of (±)-Blebbistatin<br />

(Cat. No. 203390) in DMSO.<br />

(—)-Blebbistatin 203391 The active enantiomer of (±)-Blebbistatin (Cat. No. 203390) that<br />

accounts for the inhibitory activity towards ATPase (IC ~2 mM) and<br />

50<br />

myosin II-dependent cellular processes.<br />

(+)-Blebbistatin 203392 The inactive enantiomer of Blebbistatin. Useful as a negative control<br />

for the active enantiomer (Cat. No. 20339 ).<br />

BTS 203895 (N-Benzyl-p-toluenesulphonamide)<br />

A potent inhibitor of Ca2+ -stimulated myosin S actin-stimulated<br />

ATPase activity (IC = ~5 mM). Also blocks actin-stimulated ATPase<br />

50<br />

activity with similar potency (IC = 5 mM). Reversibly blocks gliding<br />

50<br />

motility of skeletal muscle myosin (IC = 30 mM for H-Ras).<br />

50<br />

Bufalin 203900 [5b, 20(22)-Bufadienolide-3b, 14-diol]<br />

A cardiotonic steroid that potently inhibits ouabain-sensitive<br />

Na + ,K + -ATPase activity (IC 50 = .4 nM).<br />

2,3-Butanedione 2-Monoxime 203984 (BDM)<br />

A general reversible inhibitor of myosin ATPases of eukaryotic cells.<br />

Calmidazolium Chloride 208665 (Compound R 24571)<br />

A calmodulin antagonist that also acts as a strong, non-competitive<br />

inhibitor of skeletal muscle sarcoplasmic reticulum Ca 2+ -ATPase (K i =<br />

60 nM).<br />

Cyclopiazonic Acid, Penicillium<br />

cyclopium<br />

239805 (CPA)<br />

A cell-permeable, reversible inhibitor of endoplasmic reticulum Ca 2+ -<br />

ATPase (IC 50 = 0 -20 nM).<br />

DPC 300265 (Diphenylamine-2-carboxylic Acid; 2,2´-Iminodibenzoic Acid; N-<br />

Phenylanthranilic Acid)<br />

A potent non-specific blocker of Cl – channels that inhibits cystic<br />

fibrosis transmembrane regulator ATPase activity.<br />

Eg5 <strong>Inhibitor</strong> II 324621 (NSC 83265; S-Trityl-L-cysteine)<br />

A cell-permeable cysteine thioether compound that potently blocks<br />

both the basal and microtubule-activated ATPase activities of mitotic<br />

spindle kinesin Eg5, human (IC = .0 mM and 40 nM, respectively).<br />

50<br />

N Eg5 <strong>Inhibitor</strong> III, Dimethylenastron 324622 [7,7-Dimethyl-4-(3-hydroxyphenyl)-5-oxo-3,4,5,6,7,8hexahydroquinazolin-2(1H)-thione]<br />

A cell-permeable, potent, specific, and reversible inhibitor of the<br />

microtubule-stimulated ATPase activity of the mitotic motor, Eg5<br />

(IC = 200 nM). Exhibits little effect on the ATPase activity of kinesin-<br />

50<br />

, -4, -7, and - 0 and is ~ 00-fold more potent than Monastrol (Cat.<br />

No. 475879).<br />

N-Ethylmaleimide 34115 (NEM)<br />

An inhibitor of H + -ATPase that also suppresses the short-circuit current<br />

(IC = 22 mM) in pancreatic duct cells.<br />

50<br />

Folimycin, Streptomyces sp. 344085 (Concanamycin A)<br />

A highly sensitive and specific inhibitor of vacuolar-type H + -ATPase<br />

(V-type; K i = 20 pM).<br />

4-Hydroxynonenal 393204 (HNE; 4-Hydroxy-2-nonenal)<br />

An irreversible inhibitor of Na + -K + -ATPase activity (IC 50 = 20 mM).<br />

0 mg $ 7<br />

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5 mg $ 46<br />

5 mg $ 46<br />

mg $ 5<br />

mg $95<br />

5 mg $83<br />

0 mg $ 2<br />

500 mg $34<br />

0 mg $93<br />

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mg<br />

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ATPase <strong>Inhibitor</strong>s, continued<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Other <strong>Inhibitor</strong>s of Biological Interest<br />

Product Cat. No. Comments Size Price<br />

Hypocrellin B, Hypocrella<br />

bambusae<br />

400079 (HC-B)<br />

A lipid-soluble peryloquinone derivative that causes photo-inactivation<br />

of Na + -K + -ATPase.<br />

Mastoparan 444898 (INLKALAALAKKIL)<br />

Causes a transient Ca 2+ release from the sarcoplasmic reticulum and<br />

inhibits Na + -K + -ATPase activity (IC 50 = 7.5 mM).<br />

Mycalolide B, Mycale sp. 475975 A marine toxin that inhibits actin-activated myosin Mg 2+ -ATPase<br />

activity and also blocks polymerization (IC 50 = 0-50 nM in L 2 0<br />

leukemia cells).<br />

NC- 300-B 479915 [2-(2-Dimethylaminobenzylsulfinyl)-5-methoxybenzimidazole]<br />

A long-acting H + -K + ATPase inhibitor (IC 50 = 4.4 mM at pH 6.0).<br />

Interested in Studying Mitochondrial Permeability Transition?<br />

Check out our <strong>Inhibitor</strong>s of Mega Channel and Electron Transport<br />

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0 mg $ 69<br />

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Oligomycin 495455 An inhibitor of predominantly F F 0 -type ATPases (IC 50 = 50 mM). 0 mg $66<br />

Omeprazole 496100 {H 168/68; 5-Methoxy-2[(4-methoxy-3,5-dimethyl-2pyridyl)methylsulfinyl]-1H-benzimidazole}<br />

An inhibitor of Na + -K + -ATPase activity (IC 50 = 86 mM).<br />

Acid-degraded omeprazole inhibits Na + -K + -ATPase activity with<br />

greater potency (IC 50 = 9 mM).<br />

Ouabain, Octahydrate 4995 (Strophanthin G)<br />

A cardiotonic steroid that acts as an inhibitor of Na + -K + -ATPase.<br />

Locks the enzyme in an outward facing manner.<br />

Phorbol- 2, 3-dibutyrate 524390 (PDBu)<br />

Stimulates the phosphorylation of Na + -K + ATPase, thereby inhibiting<br />

its activity.<br />

Suramin, Sodium Salt 574625 Inhibits Ca 2+ -ATPase in sarcoplasmic reticulum membranes. A<br />

reversible, competitive inhibitor of protein tyrosine phosphatases.<br />

Thapsigargin 586005 A cell-permeable tumor-promoting sesquiterpene lactone that<br />

releases Ca 2+ by inhibiting endoplasmic reticular Ca 2+ -ATPase<br />

(IC 50 = 4- 3 nM).<br />

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Other <strong>Inhibitor</strong>s of Biological Interest<br />

<strong>Inhibitor</strong>s of Farnesyltransferase (FTase), Geranylgeranyltransferase<br />

(GGTase), and Methyltransferase<br />

Prenylation is carried out by cytoplasmic enzymes<br />

known as geranylgeranyltransferases and<br />

farnesyltransferases that covalently attach 20-carbon<br />

(geranylgeranyl) or 15-carbon (farnesyl) isoprenoids to<br />

the C-terminus of intracellular proteins via thioether<br />

linkages. Protein farnesyltransferase I (FTase I) and<br />

protein geranylgeranyltransferase I (GGTase I) recognize<br />

a CAAX motif as substrate, where C is cysteine, A<br />

represents any aliphatic amino acid, and X is either<br />

serine or methionine (FTase I), or leucine (GGTase I).<br />

The Rab GGTase II attaches geranylgeranyl groups to<br />

proteins that terminate in either CC or CXC motifs. Many<br />

proteins in signal transduction pathways are prenylated.<br />

Perhaps the best-characterized farnesylation products<br />

are the Ras ATPases. Ras is a guanine nucleotide binding<br />

protein that transduces growth and differentiation<br />

signals from receptor tyrosine kinases to the nucleus.<br />

Mammalian cells express four types of Ras; H-, N-,<br />

KA-, and KB-Ras. Mutated or oncogenic forms of Ras<br />

require farnesylation for their ability to transform cells.<br />

Peptidomimetics designed against the Ras CAAX motif<br />

have been shown to reverse oncogenic transformation<br />

by H-Ras and inhibit growth of H-Ras-transformed<br />

cells. Hence, several types of FTase inhibitors have been<br />

designed for use as potential anticancer agents. Since<br />

Ras proteins are posttranslationally modified by FTase<br />

and carboxymethylation and they act as a common focal<br />

point for signals from growth factor receptors, use of<br />

FTase inhibitors is likely to interfere with their action<br />

and impede cell proliferation. These inhibitors can be<br />

divided into four groups based on the mechanism of<br />

their action: (1) competitive inhibitors of farnesyl PPi, (2)<br />

peptidomimetic inhibitors based on the CAAX motif, (3)<br />

bisubstrate inhibitors, and (4) inhibitors with unknown<br />

mechanisms. CAAX peptidomimetics can either<br />

function as alternative substrates in the FTase catalyzed<br />

reaction, or they can competitively inhibit FTase without<br />

serving as substrates.<br />

References:<br />

Mazieres, J., et al. 2004. Cancer Lett. 206, 59.<br />

Sebti, S.M., and Adjei, A.A. 2004. Semin. Oncol. 31 (Suppl ), 28.<br />

Head, J.E., and Johnston, S.R. 2003. Expert Opin. Emerg. Drugs 8, 63.<br />

Casey, P.J., and Seabra, M.C. 996. J. Biol. Chem. 271, 5289.<br />

Lerner, E.C., et al. 995. J. Biol. Chem. 270, 26802.<br />

Kelloff, G.J., et al. 997. Cancer Epidemiol. Biomarkers Prev. 6, 267.<br />

Product Cat. No. Comments Size Price<br />

N-Acetyl-S-farnesyl-L-cysteine<br />

(AFC)<br />

N-Acetyl-S-geranylgeranyl-Lcysteine<br />

(AGGC)<br />

More online... www.calbiochem.com/inhibitors/Ftase<br />

<strong>Inhibitor</strong>s of Farnesyltrasferase (FTase), Geranylgeranyltransferase (GGTase), and Methyltransferase<br />

110110 (AFC)<br />

Exhibits high affinity for S-farnesyl-cysteine methyltransferase<br />

(K m = 20 mM) and thereby inhibits the COOH-terminal methylation<br />

of proteins in intact cells as well as in cell-free systems. Also inhibits<br />

fMLP-induced superoxide anion generation (IC 50 = 5 mM).<br />

110115 (AGGC)<br />

Exhibits higher affinity (K m = 7 mM) than AFC for carboxyl methyltransferase<br />

and acts as a more effective inhibitor of fMLP-induced<br />

superoxide anion generation (IC 50 = 4 mM) than AFC.<br />

5'-Deoxy-5'-methylthioadenosine 260585 (MeSAdo; MTA)<br />

Potently inhibits protein carboxymethyltransferase and induces<br />

apoptosis in leukemia U937 cells.<br />

FPT <strong>Inhibitor</strong> I 344150 {(E,E)-2-[(Dihydroxyphosphinyl)methyl]-3-oxo-3-[(3,7,11-trimethyl-<br />

2,6,10-dodecatrienyl)-amino]propanoic Acid, 3Na}<br />

A highly selective and potent inhibitor of Ras farnesyl-protein<br />

transferase (IC 50 = 83 nM). At much higher concentrations, inhibits<br />

geranylgeranyltransferase I (IC 50 = 26 mM) and II (IC 50 = 47 mM).<br />

Resistant to cleavage by phosphatases.<br />

5 mg $92<br />

5 mg $92<br />

50 mg $73<br />

mg $89<br />

44 Orders Phone 800 854 34 7<br />

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Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Other <strong>Inhibitor</strong>s of Biological Interest<br />

<strong>Inhibitor</strong>s of Farnesyltrasferase (FTase), Geranylgeranyltransferase (GGTase), and Methyltransferase, continued<br />

Product Cat. No. Comments Size Price<br />

FPT <strong>Inhibitor</strong> II 344152 {(E,E)-2-[2-Oxo-2-[[(3,7,11-trimethyl-2,6,10-dodecatrienyl)oxy]<br />

amino]ethyl]phosphonic Acid, 2Na}<br />

A highly selective and potent inhibitor of Ras farnesyl-protein<br />

transferase (IC 50 = 75 nM). Also inhibits C 5 and C20 protein<br />

prenylation in NIH 3T3 cells at higher concentrations. Resistant to<br />

cleavage by phosphatases.<br />

FPT <strong>Inhibitor</strong> III 344154 {(E,E)-[2-Oxo-2-[[(3,7,11-trimethyl-2,6,10-dodecatrienyl)oxy]amino]<br />

ethyl]phosphonic Acid, (2,2-Dimethyl-1-oxopropoxy)methyl Ester, Na}<br />

A cell-permeable prodrug ester of farnesyl-protein transferase (FPT)<br />

inhibitor II that is cleaved to the active FPT inhibitor II by cytosolic<br />

esterases. Inhibits Ras processing in cells at about 00 mM concentrations.<br />

Inhibits C 5 and C20 protein prenylation in NIH 3T3 cells.<br />

FTase <strong>Inhibitor</strong> I 344510 {N-[2(S)-[2(R)-Amino-3-mercaptopropylamino]-3-methylbutyl]-Phe-<br />

Met-OH; B581}<br />

A potent, cell-permeable inhibitor of FTase (IC = 2 nM). Less<br />

50<br />

active against GGTase (IC = 790 nM).<br />

50<br />

FTase <strong>Inhibitor</strong> II 344512 (H-Cys-4-Abz-Met-OH)<br />

A potent FTase inhibitor (IC 50 = 50 nM).<br />

FTase <strong>Inhibitor</strong> III 344514 [H-Cys-Val-2-Nal-Met-OH(Nal= 2-naphthylalanine)]<br />

Potent FTase inhibitor (IC 50 = 50 nM).<br />

FTI-276 344550 {N-[2-phenyl-4-N[2(R)-amino-3-mercaptopropylamino benzoyl]methionine,<br />

TFA}<br />

A highly potent and selective inhibitor of FTase in vitro<br />

(IC = 500 pM). Less active against GGTase (IC = 50 nM).<br />

50 50<br />

FTI-277 344555 {Methyl {N - [2-phenyl-4-N [2(R)-amino-3-mecaptopropylamino]<br />

benzoyl]}-methionate, TFA}<br />

Prodrug form of FTI-276 (Cat. No. 344550 ) that acts as a highly<br />

potent and selective inhibitor of FTase (IC = 50 nM). Inhibits H-Ras<br />

50<br />

processing in whole cells (IC = 00 nM), but it does not inhibit<br />

50<br />

geranylgeranylated Rap A processing even at 0 mM. Induces accumulation<br />

of non-farnesylated cytoplasmic H-Ras, which binds to Raf<br />

protein to form inactive Ras/Raf complexes. FTI-277 is also highly<br />

effective and selective in disrupting constitutive H-Ras-specific<br />

activation of MAP kinase. Induces apoptosis in v-K-ras-transformed<br />

normal rat kidney (KNRK) cells, but not in control NRK cells.<br />

N FTI-2 48 344557 [2-(((5-((1H-Imidazol-4-ylmethyl)-amino)-methyl)-2'-methylbiphenyl-2-carbonyl)-amino)-4-methylsulfanyl-butyric<br />

acid, 2TFA]<br />

Preferentially inhibits protein farnesyltransferase activity<br />

(IC = 820 pM for mammalian, .8 nM for T. brucei, and 5 nM for<br />

50<br />

P. falciparum) compared to protein geranylgeranyltransferase-I<br />

(IC > .7 mM for mammalian).<br />

50<br />

N FTI-2628 344559 [2-(((5-((1H-Imidazol-4-ylmethyl)-amino)-methyl)-2'-methyl-biphenyl-<br />

2-carbonyl)-amino)-4-methylsulfanyl-butyric acid benzyl ester]<br />

A cell-permeable benzyl ester prodrug form of FTI-2 48 (Cat. No.<br />

344557) that preferentially inhibits protein farnesyltransferase<br />

activity (IC = 530 nM for mammalian and .0 mM for P. falciparum)<br />

50<br />

over protein geranylgeranyltransferase-I (IC > 0 mM for mam-<br />

50<br />

malian) and displays anti-malarial properties. Potently disrupts Ras<br />

farnesylation in H-Ras-transformed NIH 3T3 cells (IC = 20 nM) and<br />

50<br />

inhibits the growth of P. falciparum in red blood cell (ED = 50 nM).<br />

50<br />

GGTI-286 345878 {N-4-[2(R)-Amino-3-mercaptopropyl]amino-2-phenylbenzoyl-(L)leucine<br />

methyl ester, TFA}<br />

A cell-permeable form of GGTI-287 (Cat. No. 345880); a very potent<br />

inhibitor of the processing of the geranylgeranylated Rap A protein<br />

(IC = 2 mM).<br />

50<br />

mg $79<br />

mg $82<br />

mg $ 05<br />

mg $79<br />

mg $ 0<br />

250 mg $ 8<br />

250 mg $ 23<br />

500 mg $ 9<br />

500 mg $ 9<br />

250 mg $ 8<br />

Technical Support<br />

Phone 800 628 8470<br />

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45


Other <strong>Inhibitor</strong>s of Biological Interest<br />

<strong>Inhibitor</strong>s of Farnesyltrasferace (FTase), Geranylgeranyltransferase (GGTase), and Methyltransferase, continued<br />

Product Cat. No. Comments Size Price<br />

GGTI-287 345880 {N-4-[2(R)-Amino-3-mercaptopropyl]amino-2-phenylbenzoyl-(L)leucine,TFA}<br />

A highly potent and selective GGTase inhibitor in vitro (IC 50 = 5 nM).<br />

Inhibits FTase only at higher concentrations (IC 50 = 25 nM).<br />

GGTI-297 345882 {N-4-[2(R)-Amino-3-mercaptopropyl]amino-2-naphthylbenzoyl-(L)leucine,<br />

TFA}<br />

A potent and selective GGTase I <strong>Inhibitor</strong> (IC 50 = 50 nM) relative to<br />

FTase (IC 50 = 200 nM).<br />

GGTI-298 345883 {N-4-[2(R)-Amino-3-mercaptopropyl]amino-2-naphthylbenzoyl-(L)-<br />

Leucine methyl ester, TFA}<br />

A cell-permeable prodrug form of GGTase I inhibitor, GGTI-297<br />

(Cat. No. 345882). Inhibits the processing of Rap A (IC 50 = 3 mM)<br />

but has no effect on the processing of H-Ras even at higher<br />

concentrations ( 5 mM).<br />

GGTI-2 33 345884 {4-[[N-(Imidazol-4-yl)methyleneamino]-2-(1-naphthyl)benzoyl]leucine}<br />

A potent and selective non-thiol inhibitor of GGTase I (IC 50 = 38 nM)<br />

with a 40-fold selectivity over FTase (IC 50 = 5.4 mM).<br />

GGTI-2 47 345885 {4-[[N-(Imidazol-4-yl)methyleneamino]-2-(1naphthyl)benzoyl]leucine<br />

methyl ester}<br />

Gliotoxin, Gladiocladium<br />

fimbriatum<br />

The methyl ester derivative of GGTI-2 33 (Cat No. 345884).<br />

Selectively inhibits GGTase I over FTase in whole cells. Blocks the<br />

geranylgeranylation of Rap A with an IC value over 60-fold lower<br />

50<br />

than that required to disrupt the farnesylation of H-Ras<br />

(IC = 500 nM for Rap A versus IC > 30 mM for H-Ras).<br />

50 50<br />

371715 {2,3,5a,6-Tetrahydro-6-hydroxy-3(hyroxymethyl)-2-methyl-10H-<br />

3a,10a-epidithio-pyrazinol[1,2a]indole-1,4-dione}<br />

An immunosuppressive secondary metabolite produced by several<br />

pathogenic fungi that specifically inhibits NF-kB activation in B and<br />

T cells at nanomolar concentrations.<br />

a-Hydroxyfarnesylphosphonic Acid 390601 (HFPA)<br />

A potent and selective competitive inhibitor of farnesyl-protein<br />

transferase (IC = 30 nM). At higher concentrations, it inhibits<br />

50<br />

GGTase I (IC = 35.8 mM) and II (IC = 67 mM). Useful for inhibition<br />

50 50<br />

of Ras processing in vivo and in vitro.<br />

L-744,832 422720 {(2S)-2-[[(2S)-2-[(2S,3S)-2-[(2R)-2-Amino-3mercaptopropyl]amino]-3-methylpentyl]oxy]-1-oxo-3phenylpropyl]amino]-4-(methylsulfonyl)-butanoic<br />

Acid 1-Methylethyl<br />

Ester; L-744,382}<br />

A potent and selective thiol-containing peptidomimetic<br />

farnesyltransferase (FTase) inhibitor with antitumor activities.<br />

Rapidly blocks p70S6k activation and DNA synthesis, and promotes<br />

apoptosis in transgenic mice, induces p2 expression and arrests<br />

cells in G phase.<br />

Manumycin A, Streptomyces<br />

parvulus<br />

Protein Arginine N-<br />

Methyltransferase <strong>Inhibitor</strong>, AMI-<br />

444170 A potent and selective inhibitor of FTase (IC = 5 mM) compared to<br />

50<br />

GGTase (IC = 80 mM).<br />

50<br />

539209 A cell-permeable, symmetrical sulfonated urea compound that acts<br />

as a potent, specific and non-AdoMet (S-adenosyl-L-methionine,<br />

SAM)-competitive inhibitor of protein arginine N-methyltransferases<br />

(PRMTs; IC = 8.8 mM for PRMT and 3.03 for yeast-RMT p)<br />

50<br />

with minimal effect on lysine methyltransferases. Inhibits nuclear<br />

receptor reporter gene activation in MCF-7 cells, and HIV- RT<br />

polymerase (IC = 5 mM).<br />

50<br />

250 mg $ 5<br />

250 mg $ 2<br />

250 mg $ 5<br />

250 mg $ 46<br />

250 mg $ 4<br />

mg $8<br />

mg $ 42<br />

5 mg $ 8<br />

mg $77<br />

5 mg $95<br />

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<strong>Inhibitor</strong>s of Glycoprotein Processing and Trafficking<br />

N- and O-glycan structures contribute significantly<br />

to biological recognition and cell adhesion during<br />

immune surveillance, inflammatory reactions,<br />

hormone action, and viral infections. The cell- and<br />

tissue-specific changes in cell surface oligosaccharides<br />

during various phases of development indicate that<br />

these structures are also involved in cell adhesion and<br />

migration during embryogenesis. Modifications in the<br />

branching and extension of N-glycans are also observed<br />

on cells undergoing oncogenic transformation. These<br />

modifications may result in alterations in cell adhesion<br />

and contribute to the invasiveness and metastatic<br />

potential of malignant cells.<br />

<strong>Inhibitor</strong>s of Glycoprotein Processing and Trafficking<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Other <strong>Inhibitor</strong>s of Biological Interest<br />

<strong>Inhibitor</strong>s of glycoprotein processing act late in the<br />

N-glycan processing pathway and block the oncogene-<br />

induced changes in cell surface oligosaccharide<br />

structures. The various processing inhibitors provide<br />

useful tools to understand the role of specific kinds<br />

of oligosaccharide structures in the function of<br />

various glycoproteins. Because of the specificity of the<br />

processing inhibitors for individual glycosidases, these<br />

compounds are also valuable reagents to differentiate<br />

various enzymatic activities in the cells.<br />

Product Cat. No. Comments Size Price<br />

Australine, Hydrochloride,<br />

Castanospermum australe<br />

Benzyl-2-acetamido-2-deoxy-a-<br />

D-galactopyranoside<br />

N-(n-Butyl)<br />

deoxygalactonojirimycin<br />

N-Butyldeoxynojirimycin,<br />

Hydrochloride<br />

Castanospermine,<br />

Castanospermum australe<br />

189422 [(1R,2R,3R,7S,7aR)-3-Hydroxymethyl-1,2,7-trihydroxypyrrolizidine]<br />

Pyrrolizidine alkaloid that inhibits a-glucosidase, amyloglucosidase,<br />

and glucosidase I. Inhibits glycoprotein processing at the glucosidase<br />

I step, resulting in the accumulation of glycoproteins containing<br />

Glc 3 Man 79 (GlcNAc)2-oligosaccharides. Does not inhibit a- or bgalactosidase,<br />

b-glucosidase, or a- or b-mannosidase.<br />

200100 (Benzyl-a-GalNAc)<br />

Used as an inhibitor of O-linked glycosylation in a variety of cell lines.<br />

It has also been used to inhibit 2,3(O)-sialyltransferase and disrupt<br />

glycoprotein targeting in HT-29 cells. Substrate for N-acetyl-b-Dglucosaminyltransferase.<br />

mg $87<br />

00 mg $ 5<br />

203994 A potent and selective inhibitor of a-D-galactosidase. 5 mg $ 68<br />

203996 (N-Butyl-DNJ, HCl; NB-DNJ, HCl)<br />

A non-hormonal, alkylated iminosugar that acts as a transition state<br />

analog inhibitor of ceramide-specific glycosyltransferases and ER<br />

a-glucosidases I and II. Displays a broad-spectrum antiviral activity<br />

by aiding the misfolding of glycoproteins.<br />

218775 (1S,6S,7R,8aR)-Tetrahydroxyoctahydroindolizine<br />

Plant alkaloid inhibitor of several b-glucosidases and a-glucosidases,<br />

including those involved in N-linked processing of glycoproteins.<br />

Resulting oligosaccharides are primarily Glu 3 Man 7-9 (GlcNAc) 2 .<br />

Reduces bFGF induced angiogenesis in mice. Inhibits endothelial cell<br />

migration and invasion of basement membrane. Exhibits anti-viral<br />

properties. Typically used at – 0 µg/ml.<br />

Conduritol B Epoxide 234599 An irreversible, potent, and specific inhibitor of glucocerebrosidase in<br />

cultured neurons. Has also been shown to inhibit a-glucosidase from<br />

yeast and rabbit intestinal sucrase-isomaltase complex.<br />

2-Deoxy-D-galactose 259580 Suggested to act as an inhibitor of fucosylation. It has also been used<br />

for competitive elution of Anadarin P lectin (a galactosyl-binding<br />

lectin from blood clam).<br />

Deoxyfuconojirimycin,<br />

Hydrochloride<br />

Deoxygalactonojirimycin,<br />

Hydrochloride<br />

More online... www.calbiochem.com/inhibitors/glycoprotein<br />

259541 (DFJ; 1,5-Dideoxy-1,5-imino-L-fucitol, HCl)<br />

Potent and specific competitive inhibitor (K = 0 nM) of human liver<br />

i<br />

a-fucosidase.<br />

259544 (DGJ; 1,5-Dideoxy-1,5-imino-D-galactitol; Galactostatin, HCl)<br />

A potent and selective a-galactosidase inhibitor.<br />

0 mg $20<br />

mg $38<br />

00 mg $2 3<br />

g $87<br />

5 mg $ 30<br />

5 mg $ 59<br />

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Phone 800 628 8470<br />

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47


Other <strong>Inhibitor</strong>s of Biological Interest<br />

<strong>Inhibitor</strong>s of Glycoprotein Processing and Trafficking, continued<br />

Product Cat. No. Comments Size Price<br />

-Deoxymannojirimycin,<br />

Hydrochloride<br />

-Deoxynojirimycin, Hydrochloride 260684 (DNJ, HCl)<br />

Kifunensine, Kitasatosporia<br />

kifunense<br />

260575 (1,5-Dideoxy-1,5-imino-D-mannitol, HCl; DMJ)<br />

Special a-mannosidase I inhibitor that blocks conversion of high<br />

mannose to complex oligosaccharides.<br />

Specific glucosidase inhibitor, including trimming glucosidases I<br />

and II, that sequentially removes the three glucose residues from<br />

precursor Glc 3 Man 9 GlcNAc 2 in N-linked glycan biosynthesis.<br />

422500 A potent alkaloid inhibitor of mannosidase I. An ineffective inhibitor<br />

of mannosidase II and the endoplasmic reticulum a-mannosidase.<br />

Mannostatin A, Hydrochloride 444042 A potent glycosidase inhibitor that blocks mannosidase II processing<br />

in the Golgi more effectively than Swainsonine (Cat. No. 574775).<br />

DL-threo-PDMP, Hydrochloride 513100 (1-Phenyl-2-decanoylamino-3-morpholino-1-propanol, HCl)<br />

PDMP closely resembles the natural sphingolipid substrate of brain<br />

glucosyltransferase and is a potent and competitive inhibitor of this<br />

enzyme.<br />

Swainsonine, Swainsona canescens 574775 [8ab-Indolizidine-1a,2a,8b-triol; (1S,2S,8R,8aR)-Trihydroxyindolizidine]<br />

Reversible active-site inhibitor of lysosomal a-mannosidase. Blocks<br />

the processing of high mannose to complex type oligosaccharides.<br />

Tunicamycin, Streptomyces<br />

lysosuperficus<br />

654380 A nucleoside antibiotic that inhibits N-linked glycosylation and<br />

blocks the formation of N-glycosidic protein-carbohydrate linkages.<br />

A dedicated<br />

resource for<br />

glycobiology-<br />

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enzymes,<br />

antibiotics,<br />

substrates, and<br />

carbohydrateprotein<br />

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5 mg $ 03<br />

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mg $20<br />

mg $244<br />

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$3 3


Heat Shock Protein <strong>Inhibitor</strong>s<br />

Heat shock proteins (HSPs) are a group of proteins that<br />

are expressed at higher levels when cells are exposed<br />

to higher temperatures. The upregulation of the HSPs<br />

is a key part of the heat shock response. Production of<br />

high levels of heat shock proteins can also be triggered<br />

by exposure to different kinds of environmental<br />

stress conditions, such as infection, inflammation,<br />

exposure of the cell to toxins. Depending on the level<br />

of stress, injured cells may undergo either necrosis<br />

or apoptosis. Under extreme stress conditions, when<br />

there is diminution in regulated activation of apoptotic<br />

pathways, cells undergo necrosis. At lower stress levels,<br />

cells activate their apoptotic machinery. However, at<br />

sub-lethal stress levels, cells may attempt to survive<br />

and activate a stress response system that includes a<br />

rapid induction of HSPs. HSPs interact with diverse<br />

protein substrates and assist in their folding and in the<br />

elimination of any misfolded or damaged molecules.<br />

They are transiently expressed during cell cycle to<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Other <strong>Inhibitor</strong>s of Biological Interest<br />

Product Cat. No. Comments Size Price<br />

7-AAG 100068 An inhibitor of Hsp90. 500 mg $ 78<br />

7-DMAG 100069 A potent antitumor analog of 7-AAG (Cat. No. 00068) that binds<br />

to the ATPase site of human Hsp90a with high affinity (GI 50 = 5 nM<br />

for 7-DMAG vs. 20 nM for 7-AAG in the NCI 60-cell panel in vitro<br />

activity screen), and displays excellent bioavailability and aqueous<br />

solubility.<br />

Geldanamycin, Streptomyces<br />

hygroscopicus<br />

500 mg $ 78<br />

345805 A specific inhibitor of Hsp90. 00 mg $ 80<br />

Heat Shock Protein <strong>Inhibitor</strong> I 373260 A benzylidene lactam compound that blocks the induction of heat<br />

shock proteins Hsp70, Hsp72, and Hsp 05.<br />

Heat Shock Protein <strong>Inhibitor</strong> II 373265 A metabolite of the Heat Shock Protein <strong>Inhibitor</strong> I (Cat. No. 373260)<br />

that exhibits similar in vitro activity.<br />

Hsp25 Kinase <strong>Inhibitor</strong> 385880 A 3-residue peptide that acts as a potent and selective inhibitor of<br />

mammalian heat-shock protein (Hsp25) kinase [also called mitogenactivated<br />

protein kinase-activated protein kinase-2 (MAPKAP<br />

kinase-2)]. Inhibition is competitive with respect to the substrate<br />

peptide (K = 8. µM) and non-competitive with respect to ATP (K =<br />

i i<br />

34 µM).<br />

Related Products<br />

Hsp27 ELISA Kit<br />

Kit Contents: Anti-Hsp27 coated microplate, Hsp27 standard, lysis<br />

buffer, assay diluent, detector antibody, wash buffer, HRP-conjugate,<br />

TMB, stop solution, and a user protocol. kit = 96 tests.<br />

Cat. No. QIA119 1 kit $464<br />

prevent differentiating cells from undergoing apoptosis.<br />

Many tumor cells have constitutively elevated levels<br />

of HSP that impart protection against cytotoxic agents<br />

thereby raising the apoptosis threshold of these cells.<br />

This abnormal expression of HSPs may lead to multidrug<br />

resistance in aggressively growing tumors. Many<br />

HSPs, including HSP27 and HSP70, have been shown<br />

to block apoptosis. HSPs can also allow cancerous<br />

cells to escape the immunosurveillance mediated by<br />

death ligands and can render these cells resistant to<br />

chemotherapy. Hence, HSPs are fast becoming new<br />

targets for therapeutic interventions.<br />

References<br />

Chiosis, G., et al. 2004. Drug Discov. Today 9, 88 .<br />

Odunuga, O.O., et al. 2004. Bioessays 26, 058.<br />

Creagh, E.M., et al. 2000. Leukemia 14, 6 .<br />

Jolly,C., and Morimoto, R.I. 2000. J. Natl. Cancer Inst. 92, 564.<br />

Gibbons, N.B., et al. 2000. Prostate 45, 58.<br />

Arrigo, A.P. 2000. Pathol. Biol. (Paris) 48, 280.<br />

5 mg $ 07<br />

0 mg $ 23<br />

mg $90<br />

Find more than 20 anti-Hsp antibodies at our updated Antibody Resource<br />

www.calbiochem.com/antibody resource<br />

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49


Other <strong>Inhibitor</strong>s of Biological Interest<br />

<strong>Inhibitor</strong>s of Mitochondrial Function<br />

In addition to being the energy generators in the cell,<br />

mitochondria play an important role in cell survival and<br />

cell death. In fact, any abnormality in the mitochondrial<br />

energy generation machinery can lead to cell death.<br />

Mitochondria are highly vulnerable to inhibition or<br />

uncoupling of the energy harnessing process and their<br />

structural and functional characteristics provide a<br />

number of primary targets for xenobiotic-induced<br />

bioenergetic failure. <strong>Inhibitor</strong>s of mitochondrial function<br />

include compounds that act as electron transport<br />

inhibitors, uncouplers of oxidative phosphorylation,<br />

respiratory chain inhibitors, phosphorylation inhibitors,<br />

ionophores, and Krebs cycle inhibitors. The study of<br />

mitochondrial metabolism using these compounds has<br />

led to the identification of bioenergetic control points<br />

for cell replication, cell differentiation, and cell death.<br />

Use of specific inhibitors has also helped to distinguish<br />

the electron transport system from the phosphorylation<br />

system and define the sequence of redox carriers along<br />

the respiratory chain. Five different enzyme complexes<br />

have been recognized in the mitochondria. Complexes<br />

I, II, III, and IV are the electron transfer complexes,<br />

whereas complex V is an energy-conserving complex. It<br />

catalyzes ATP-P i exchange and ATP hydrolysis.<br />

Electron transport inhibitors act by preventing the<br />

passage of electrons from one carrier to the next.<br />

Irreversible inhibitors may cause a complete stoppage of<br />

respiration, whereas competitive inhibitors may allow<br />

some oxygen consumption and passage of electrons,<br />

but the conditions are not optimum to maintain a<br />

chemiosmotic gradient. Hence, the addition of ADP<br />

does not affect respiration. Electron transport system<br />

(ETS) accepts energy from carriers in the mitochondrial<br />

matrix and stores it to a form that can be used to<br />

phosphorylate ADP. NAD and FAD are the two energy<br />

carriers that donate energy to ETS. NAD carries energy<br />

to complex I (NADH-Coenzyme Q reductase) of the<br />

electron transport chain, whereas FAD is a part of the<br />

succinate dehydrogenase complex (complex II).<br />

Uncouplers of oxidative phosphorylation, such as<br />

CCCP and 2,4-dintirophenol, inhibit mitochondrial<br />

function by abolishing the obligatory linkage between<br />

the respiratory chain and the phosphorylation system<br />

in intact mitochondria. Here the electron transport<br />

system is uninhibited due to complete and irreversible<br />

dissipation of the chemiosmotic gradient.<br />

<br />

<br />

<br />

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<br />

<br />

<br />

<br />

<br />

<br />

<br />

<br />

<br />

<br />

<br />

<br />

<br />

<br />

2e-<br />

<br />

<br />

<br />

<br />

<br />

<br />

2e -<br />

<br />

2e-<br />

<br />

2e-<br />

2e-


<strong>Inhibitor</strong>s of Mitochondrial Function<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Other <strong>Inhibitor</strong>s of Biological Interest<br />

Product Cat. No. Comments Size Price<br />

Atractyloside, Dipotassium Salt,<br />

Atractylis gummifera<br />

Bongkrekic Acid,<br />

Triammonium Salt<br />

Carbonyl Cyanide<br />

m-Chlorophenylhydrazone<br />

Carboxyatractyloside,<br />

Atractylis gummifera<br />

189300 (ATR, 2K)<br />

Toxic compound originally isolated from the Mediterranean<br />

thistle Atractylis gummifera. Acts as an ADP/ATP translocase<br />

(AAT) inhibitor. Also causes the release of cytochrome c from<br />

mitochondria.<br />

203671 (BA, 3NH4; 3-Carboxymethyl-17-methoxy-6,18,21-trimethyldocosa-<br />

2,4,8,12,18,20-heptaenedioic Acid)<br />

Acts as a ligand of the adenine nucleotide translocator. A potent<br />

inhibitor of mitochondrial megachannel (permeability transition<br />

pore). Significantly reduces signs of apoptosis induced by nitric<br />

oxide. Prevents the apoptotic breakdown of the inner mitochondrial<br />

transmembrane potential (∆y m ), as well as a number of other<br />

phenomena linked to apoptosis.<br />

215911 (CCCP)<br />

Protonophore. Uncoupling agent for oxidative phosphorylation that<br />

inhibits mitochondrial function. Approximately 00 times more<br />

effective than 2,4-dinitrophenol. Binds with cytochrome c oxidase<br />

with high affinity (K d = 270 nM). Inhibits transport processes and<br />

depresses growth.<br />

216200 (C-ATR; CAT)<br />

Toxic compound originally isolated from the Mediterranean thistle<br />

Atractylis gummifera. A highly selective inhibitor of the cytosolic<br />

side-specific mitochondrial ADP/ATP carrier (AAC; K i < 0 nM).<br />

CGP-37 57 220005 [7-Chloro-5-(2-chlorophenyl)-1,5-dihydro-4,1-benzothiazepin-2(3H)-one]<br />

A cell-permeable benzothiazepine derivative of clonazepam that<br />

acts as a specific and potent inhibitor of the mitochondrial Na + /<br />

Ca2+ exchanger (IC = 360 nM). Enhances the export of Ca 50 2+ from<br />

isolated mitochondria. Also reported to directly inhibit voltagegated<br />

Ca2+ channels.<br />

N (-)-Deguelin, Mundulea sericea 252740 A cell-permeable rotenoid compound that potently inhibits<br />

mitochondrial bioenergetics (IC =6.9 nM for NADH:ubiquinone<br />

50<br />

oxidoreductase activity in bovine heart ETP; IC = nM for phorbol<br />

50<br />

ester induced ornithine decarboxylase activity in MCF-7 cells)<br />

and induces apoptosis and cell cycle arrest. Selectively blocks Akt<br />

activation with minimal effects on MAPK signaling. Also shown to<br />

activate AMPK activity and inhibit COX-2 expression.<br />

F 6 341246 A cell-permeable, fluorogenic, delocalized lipophilic cationic<br />

compound that acts as a mitochondrial toxin and possesses the dual<br />

ability to induce apoptosis as well as necrosis in tumor cells. Preferentially<br />

accumulates in mitochondria, inhibits oxidative phosphorylation<br />

and causes mitochondrial transmembrane depolarization. The<br />

incorporation and localization of F 6 can be easily monitored by its<br />

fluorescence property.<br />

Hexokinase II VDAC Binding<br />

Domain Peptide, Cell-Permeable<br />

376816 (H-RQIKIWFQNRRMKWKK-MIASHLLAYFFTELN-NH 2 ; HXK2VBD-cpm)<br />

A cell-permeable peptide analog of Hexokinase II VDAC binding<br />

domain peptide. The internalization domain of the Antennapedia<br />

homeoprotein is fused to the methionine amino terminal. Shown to<br />

completely detach and translocate HXK2 from mitochondria to the<br />

cytosol in HeLa cells at 00 mM. Does not induce Bax translocation<br />

or cytochrome c release when used alone. However, it markedly<br />

sensitizes cells to cytochrome c release and to the induction<br />

of apoptosis when used in combination with a Bax-dependent<br />

apoptosis inducer, Indomethacin (Cat. No. 405268).<br />

Oligomycin 495455 A mixture of A, B, and C isomers. A macrolide antibiotic that inhibits<br />

membrane-bound mitochondrial ATPase (F ), preventing phosphoryl<br />

group transfer. Induces apoptosis in cultured human lymphoblastoid<br />

and other mammalian cells.<br />

Rotenone 557368 A mitochondrial toxin and a potent, reversible, and competitive<br />

inhibitor of complex I (NADH-CoQ reductase) of the respiratory<br />

chain. Also inhibits cellular proliferation in mouse liver.<br />

50 mg $83<br />

500 mg $265<br />

250 mg $7<br />

5 mg $207<br />

5 mg $ 8<br />

5 mg $67<br />

25 mg $ 42<br />

mg $ 90<br />

0 mg $66<br />

g $64<br />

Technical Support<br />

Phone 800 628 8470<br />

E-mail calbiochem@emdbiosciences.com<br />

5


Other <strong>Inhibitor</strong>s of Biological Interest<br />

<strong>Inhibitor</strong>s of Mitochondrial Function, continued<br />

Product Cat. No. Comments Size Price<br />

Ru360 557440 [(m)[(HCO 2 )(NH 3 )4Ru] 2 OCl 3 ]<br />

A cell-permeable oxygen-bridged dinuclear ruthenium amine<br />

complex that has been shown to bind to mitochondria with<br />

high affinity (K d = 340 pM). Specifically blocks Ca 2+ uptake into<br />

mitochondria in vitro (IC 50 = 84 pM) and in situ in intact myocytes<br />

(complete block after incubation with ~ 0 mM of Ru360 for 30 min).<br />

Does not affect other cellular Ca 2+ transport processes involved in<br />

cardiac muscle contraction, even at micromolar levels.<br />

( set = 0 × 0 mg)<br />

SFK 565833 (Suppressor of FK-506 1)<br />

A cell-permeable amidine compound that has been shown to interact<br />

with Por p (YVDAC ), a channel protein in the outer mitochondrial<br />

membrane, and to modulate ionic balance in Saccharomyces<br />

cerevisiae. It suppresses the ability of FK-506 to inhibit yeast growth<br />

in high NaCl-containing media (IC 50 ~ .5–2.5 mM), while in low<br />

NaCl-containing media, it causes mitochondrially-induced death by<br />

stimulating the release of reactive oxygen species (ROS).<br />

Valinomycin, Streptomyces<br />

fulvissimus<br />

Mitochondrial Permeability Transition<br />

Pore Reagents Set<br />

Contains g of Adenosine 5'-Diphosphate, Potassium Salt<br />

(Cat. No. 7 05), 500 mg of Bongkrekic Acid, Triammonium Salt<br />

(Cat. No. 20367 ), 5 mg of Carboxyatractyloside, Atractylis gummifera<br />

(Cat. No. 2 6200), and 00 mg of Cyclosporin A, Tolypocladium<br />

inflatum (Cat. No. 239835).<br />

Cat. No. 475876 1 set $325<br />

676377 A cyclododecadepsi-peptide ionophore antibiotic. Potassium<br />

ionophore of the mobile ion-carrier type that transports alkali<br />

metal ions across artificial or biological lipid membranes. Induces<br />

K + conductivity in cell membranes at concentrations as low as<br />

0 -8 M. Often used in membrane electrode systems for determining<br />

K + concentration. Uncouples oxidative phosphorylation by binding to<br />

sites on membranes rich in sulfhydryl groups. Induces apoptosis in<br />

murine thymocytes. Also reported to inhibit NGF-induced neuronal<br />

differentiation.<br />

52 Orders Phone 800 854 34 7<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Fax 800 776 0999<br />

Web www.emdbiosciences.com/calbiochem<br />

500 mg<br />

mg<br />

set<br />

$ 46<br />

$255<br />

$352<br />

0 mg $ 26<br />

25 mg<br />

00 mg<br />

$65<br />

$225


NF-kB Activation <strong>Inhibitor</strong>s<br />

NF-kB, a eukaryotic transcription factor plays an<br />

important role in inflammation, autoimmune response,<br />

cell proliferation, and apoptosis by regulating the<br />

expression of genes involved in these processes. It<br />

consists of homo- or heterodimers of different subunits,<br />

which belong to a family of Rel/NF-kB proteins. Five<br />

different Rel proteins [p50, p52, p65 (Rel A), RelB, and<br />

c-Rel] have been identified thus far. The most prevalent<br />

activated form of NF-kB is a heterodimer of p50 or<br />

p52 subunit and p65, which contains transactivation<br />

domains necessary for gene induction. In unstimulated<br />

cells, NF-kB is sequestered in the cytoplasm in an<br />

inactive form, bound to regulatory proteins called<br />

inhibitors of kB (IkB), of which IkBa and IkBb are<br />

considered to be the most important. IkBa is associated<br />

with transient NF-kB activation, whereas IkBb is<br />

involved in sustained activation.<br />

The activity of NF-kB is tightly regulated by interaction<br />

with inhibitory IkB proteins. In most resting cells, NFkB<br />

is sequestered in the cytoplasm in an inactive form<br />

associated with inhibitory molecules, such as IkBa,<br />

IkBb, IkBh, p105, and p100. This interaction blocks the<br />

ability of NF-kB to bind to DNA and results in the NF-kB<br />

complex being primarily localized to the cytoplasm due<br />

to a strong nuclear export signal in IkBa.<br />

Stimulation of cells by inflammatory cytokines, UV<br />

light, or reactive oxygen species leads to the rapid<br />

phosphorylation, ubiquitination, and ultimately<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Other <strong>Inhibitor</strong>s of Biological Interest<br />

proteolytic degradation of IkB, which frees NF-kB from<br />

the NF-kB-IkB complex. NF-kB then translocates to the<br />

nucleus where it binds to kB enhancer elements of proinflammatory<br />

target genes to induce transcription. NFkB<br />

is highly activated at sites of inflammation in diverse<br />

diseases and induces transcription of pro-inflammatory<br />

cytokines, chemokines, adhesion molecules, MMPs,<br />

COX-2, and inducible nitric oxide (iNOS). Hence, NF-kB<br />

has been considered as a desirable target for therapy in<br />

various inflammatory diseases. In most cancer cells,<br />

NF-kB is constitutively active and resides in the nucleus.<br />

In some cases, this may be due to chronic stimulation<br />

of the IKK pathway, while in others the gene encoding<br />

IkBa may be defective. Such continuous nuclear NF-kB<br />

activity not only protects cancer cells from apoptotic<br />

cell death, but may even enhance their growth activity.<br />

Designing antitumor agents to block NF-kB activity or<br />

to increase sensitivity to conventional chemotherapy<br />

may have great therapeutic value.<br />

References:<br />

Pande, V., and Ramos, M. J. 2005. Curr. Med. Chem. 12, 357.<br />

Bouwnecster, T. et al. 2004. Nat. Cell Biol. 6, 97.<br />

Marienfeld, R., et al. 2003. J. Biol. Chem. 278, 9852.<br />

Ghosh, S., and Karin M. 2002. Cell 109, S8 .<br />

Delhase, M., et al. 999. Science 284, 309.<br />

Rahman, A., et al. 999. J. Immunol. 162, 5466.<br />

Miyazawa, K., et al. 998. Am. J. Pathol. 152, 793.<br />

Zandi, E., et al. 998. Science 281, 360.<br />

Stancovski, I., and Baltimore, D. 997. Cell 91, 299.<br />

Baldwin, A.S. Jr. 996. Annu. Rev. Immunol. 14, 649.<br />

More online... www.calbiochem.com/inhibitors/NFKB<br />

Technical Support<br />

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53


Other <strong>Inhibitor</strong>s of Biological Interest<br />

NF-kB Activation <strong>Inhibitor</strong>s<br />

Product Cat. No. Comments Size Price<br />

BAY -7082 196870 {(E)3-[(4-Methylphenyl)sulfonyl]-2-propenenitrile}<br />

Potential anti-inflammatory agent that selectively and irreversibly<br />

inhibits the TNFa-inducible phosphorylation of IkBa (IC 50 = 0 mM)<br />

without affecting the constitutive IkBa phosphorylation. Decreases<br />

nuclear translocation of NF-kB and inhibits TNFa-induced surface<br />

expression of the endothelial-leukocyte cell adhesion molecules<br />

E-selectin, VCAM- , and ICAM- .<br />

N InSolution BAY -7082 196871 A 00 mM ( 0 mg/483 ml) solution of BAY -7082<br />

(Cat. No. 96870) in DMSO.<br />

BAY -7085 196872 {(E)3-[(4-t-Butylphenyl)sulfonyl]-2-propenenitrile}<br />

Exhibits biological properties similar to that of BAY -7082<br />

(Cat. No. 96870). BAY -7085 has also been shown to have potent<br />

anti-inflammatory properties in vivo.<br />

CAPE 211200 (Caffeic Acid Phenethyl Ester, Synthetic)<br />

An active component of propolis from honeybee hives with antiviral,<br />

anti-inflammatory, and immunomodulatory properties. Has been<br />

shown to act as a potent and specific inhibitor of NF-kB activation.<br />

(E)-Capsaicin 211274 {[(E)-N-(4-Hydroxy-3-methoxyphenyl)methyl]-8-methyl-6nonenamide}<br />

An active constituent of cayenne pepper that has anti-nociceptive<br />

and anti-inflammatory effects. Inhibits NF-kB activation by TNF-a.<br />

N Evodiamine, Evodia rutaecarpa 341211 A cell-permeable quinazolinocarboline that suppresses both<br />

inducible and constitutive NF-kB activation and<br />

NF-kB-regulated gene expression by inhibiting IKK activation.<br />

Gliotoxin, Gladiocladium<br />

fimbriatum<br />

Helenalin, A. chamissonis ssp.<br />

foliosa<br />

371715 {2,3,5a,6-Tetrahydro-6-hydroxy-3(hyroxymethyl)-2-methyl-10H-<br />

3a,10a-epidithio-pyrazinol[1,2a]indole-1,4-dione}<br />

An immunosuppressive secondary metabolite produced by several<br />

pathogenic fungi that specifically inhibits NF-kB activation in B and<br />

T cells at nanomolar concentrations.<br />

374000 A cell-permeable pseudoguainolide sesquiterpenoid lactone that<br />

inhibits NF-kB-DNA binding activity by selectively alkylating the p65<br />

subunit of NF-kB. Does not inhibit IkB degradation or NF-kB nuclear<br />

translocation.<br />

Hypoestoxide, Hypoestes rosea 401006 A naturally occurring, cell-permeable diterpene with antiinflammatory<br />

properties. Acts as a selective and direct inhibitor of<br />

IkB kinase (IC 50 = 24 mM) in TNF-a stimulated HeLa cells thereby<br />

prevents NF-kB activation.<br />

IkB Kinase <strong>Inhibitor</strong> Peptide,<br />

Cell-Permeable<br />

IkB Kinase Inactive Control<br />

Peptide, Cell-Permeable<br />

401477 (Ac-AAVALLPAVLLALLAPDDRHDSGLDSMKDE-NH 2 )<br />

A 4-amino acid peptide corresponding to the active IkB<br />

phosphorylation recognition sequence, linked to the hydrophobic<br />

region of the fibroblast growth factor signal peptide to aid in cellular<br />

delivery. Specifically inhibits LPS-induced IkB degradation by IkB<br />

kinases (IKK) in RAW 264.7 cells ( 0 mM) or TNF-a production<br />

(IC 50 > 0 mM).<br />

401478 (Ac-AAVALLPAVLLALLAPDDRHDAGLDAMKDE-NH 2 )<br />

An inactive control for IkB Kinase <strong>Inhibitor</strong> Peptide (Cat. No.<br />

40 477). Corresponds to the mutated recognition sequence of IkB<br />

(Ser 32 → Ala and Ser 36 → Ala), linked to the hydrophobic region of<br />

the fibroblast growth factor signal peptide to aid in cellular delivery.<br />

Does not have any inhibitory effect on LPS-induced IkB degradation<br />

by IkB kinases (IKK) in RAW 264.7 cells at 50 mg/ml.<br />

IKK <strong>Inhibitor</strong> II, Wedelolactone 401474 (7-Methoxy-5,11,12-trihydroxy-coumestan; Wedelolactone, Eclipta alba)<br />

The naturally isolated active ingredient of the herbal medicine,<br />

Eclipta alba, that acts as a selective and irreversible inhibitor of IKKa<br />

and b kinase activity (IC 50 < 0 mM). Inhibits NF-kB-mediated gene<br />

transcription in cells by blocking the phosphorylation and degradation<br />

of IkB.<br />

0 mg $68<br />

0 mg $68<br />

0 mg $88<br />

25 mg $ 00<br />

00 mg $62<br />

5 mg $ 49<br />

mg $8<br />

500 mg $ 35<br />

mg $ 50<br />

mg $ 90<br />

54 Orders Phone 800 854 34 7<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Fax 800 776 0999<br />

Web www.emdbiosciences.com/calbiochem<br />

mg<br />

mg<br />

$ 95<br />

$79


NF-kB Activation <strong>Inhibitor</strong>s, continued<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Other <strong>Inhibitor</strong>s of Biological Interest<br />

Product Cat. No. Comments Size Price<br />

N IKK <strong>Inhibitor</strong> III, BMS-34554 401480 {4-(2´-Aminoethyl)amino-1,8-dimethylimidazo[1,2-a]quinoxaline, HCl}<br />

A cell-permeable, potent, selective, and allosteric site-binding<br />

inhibitor of IKK-2 (IC 50 ~300 nM). Exhibits ~ 0 fold greater<br />

selectivity over IKK- (IC 50 ~4 mM).<br />

IKK-2 <strong>Inhibitor</strong>, SC-5 4 401479 (SC-514)<br />

A cell-permeable, potent, reversible, ATP-competitive, and highly<br />

selective inhibitor of IKK-2 (IC 50 ~3- 2 mM for IKK-2 homodimer,<br />

IKK- /IKK-2 heterodimer, and IKK-2). Shown to specifically block<br />

NF-kB-dependent gene expression, but not MAP kinase pathways,<br />

in stimulated RASF synovial fibroblast cells. Does not inhibit the<br />

phosphorylation and activation of the IKK complex.<br />

N InSolution IKK-2 <strong>Inhibitor</strong>, SC-5 4 401485 A 25 mM ( mg/ 78 ml) solution of IKK-2 <strong>Inhibitor</strong>,<br />

SC-5 4 (Cat. No. 40 479) in DMSO.<br />

IKK-2 <strong>Inhibitor</strong> IV 401481 {[5-(p-Fluorophenyl)-2-ureido]thiophene-3-carboxamide}<br />

A cell-permeable, potent, and selective inhibitor of IKK-2<br />

(IC 50 = 8 nM) with selectivity over IKK- , JNK, and p38 MAPK.<br />

N IKK-2 <strong>Inhibitor</strong> V 401482 [N-(3,5-Bis-trifluoromethylphenyl)-5-chloro-2-hydroxybenzamide;<br />

IMD-0354]<br />

A cell-permeable salicylamide compound that acts as an IKK-2<br />

inhibitor by selectively blocking IkBa phosphorylation<br />

(IC 50 ~250 nM) and thereby prevents the induction of NF-kB p65<br />

nuclear translocation.<br />

N IKK-2 <strong>Inhibitor</strong> VI 401483 [(5-Phenyl-2-ureido)thiophene-3-carboxamide]<br />

An ureido-thiophenecarboxamide compound that acts as a potent<br />

inhibitor of IKK-2 (IC 50 = 3 nM).<br />

Isohelenin, Inula sp. 416157 (Isoalantolactone)<br />

A cell-permeable sesquiterpene lactone with anti-inflammatory<br />

properties. Acts as a highly specific, potent, and irreversible inhibitor<br />

of NF-kB activation by preventing IkBa degradation. Does not<br />

affect the DNA binding activity of activated NF-kB or inhibit Fyn<br />

and Src kinase activities.<br />

NEMO-Binding Domain Binding<br />

Peptide, Cell-Permeable<br />

NEMO-Binding Domain Binding<br />

Peptide, Cell-Permeable, Negative<br />

Control<br />

480025 (DRQIKIWFQNRRMKWKKTALDWSWLQTE; NBD-Binding Peptide,<br />

Cell-Permeable)<br />

A cell-permeable Antennapedia-NBD (NEMO binding domain) (wild<br />

type) fusion peptide that exhibits anti-inflammatory activity in<br />

mouse model of acute inflammation. NBD is an amino-terminal<br />

a-helical region of the NEMO (NF-kB essential modifier; IKKg)<br />

associated with a carboxyl-terminal segment of IKKa and IKKb.<br />

Blocks the association of NEMO with the IKK complex and prevents<br />

NF-kB activation.<br />

480030 (DRQIKIWFQNRRMKWKK-TALDASALQTE; NBD-Binding Peptide,<br />

Cell-Permeable, Negative Control)<br />

A cell-permeable, Antennapedia-NBD mutated (Trp 739 → Ala and<br />

Trp 74 → Ala) fusion peptide analog of NEMO-Binding Domain Binding<br />

Peptide (Cat. No. 480025) that serves as a negative control.<br />

Reported to be defective in binding to NEMO.<br />

NF-kB Activation <strong>Inhibitor</strong> 481406 [6-Amino-4-(4-phenoxyphenylethylamino)quinazoline]<br />

A cell-permeable quinazoline compound that acts as a potent inhibitor<br />

of NF-kB transcriptional activation (IC 50 = nM in Jurkat cells) and<br />

LPS-induced TNF-a production (IC 50 = 7 nM in murine splenocytes).<br />

Does not exhibit cellular toxicity at concentrations required for<br />

inhibition of NF-kB transcriptional activation (IC 50 > 0 mM) or TNF-a<br />

production (IC 50 > 0 mM).<br />

N InSolution NF-kB Activation<br />

<strong>Inhibitor</strong><br />

481407 A 0 mM ( mg/28 ml) solution of NF-kB Activation <strong>Inhibitor</strong> (Cat.<br />

No. 48 406) in DMSO.<br />

mg $ 58<br />

mg $79<br />

mg $79<br />

500 mg $84<br />

5 mg $ 63<br />

mg $ 2<br />

mg<br />

500 mg<br />

500 mg<br />

mg<br />

mg<br />

$ 84<br />

$ 64<br />

$ 64<br />

$79<br />

$79<br />

Technical Support<br />

Phone 800 628 8470<br />

E-mail calbiochem@emdbiosciences.com<br />

55


Other <strong>Inhibitor</strong>s of Biological Interest<br />

NF-kB Activation <strong>Inhibitor</strong>s, continued<br />

Product Cat. No. Comments Size Price<br />

N NF-kB Activation <strong>Inhibitor</strong> II,<br />

JSH-23<br />

NF-kB SN50, Cell-Permeable<br />

<strong>Inhibitor</strong> Peptide<br />

NF-kB SN50M, Cell-Permeable<br />

Inactive Control Peptide<br />

481408 (4-Methyl-N 1 -(3-phenylpropyl)benzene-1,2-diamine)<br />

A cell-permeable diamino compound that selectively blocks<br />

nuclear translocation of NF-kB p65 and its transcription activity<br />

(IC 50 = 7. mM in a NF-kB reporter assay using RAW 264.7) without<br />

affecting IkB degradation. Shown to suppress DNA-binding of<br />

NF-kB and downregulate LPS-induced gene expression and<br />

apoptotic chromatin condensation.<br />

481480 (AAVALLPAVLLALLAPVQRKRQKLMP)<br />

Contains the nuclear localization sequence (NLS) of the transcription<br />

factor NF-kB p50 linked to the hydrophobic region (h-region) of the<br />

signal peptide of Kaposi fibroblast growth factor (K-FGF). The peptide<br />

N-terminal K-FGF h-region confers cell-permeability, while the NLS<br />

(360-369) inhibits translocation of the NF-kB active complex into<br />

the nucleus.<br />

481486 An inactive control for SN50 peptide (Cat. No. 48 480). Corresponds<br />

to the SN50 peptide sequence with substitutions of Lys 363 for Asn and<br />

Arg 364 for Gly in the NLS region.<br />

N Oridonin, R. rubescens 496915 A cell-permeable diterpenoid compound with anti NF-kB activity.<br />

Shown to block LPS-induced NF-kB activity in Jurkat and in RAW<br />

264.7 murine macrophages, and inhibit NF-kB transcriptional<br />

activity (IC 50 ~5 mg/ml in MT- cells) by disrupting NF-kB DNAbinding<br />

activity without interfering with its nuclear translocation.<br />

Parthenolide, Tanacetum<br />

parthenium<br />

512732 A sesquiterpene lactone with anti-inflammatory, antisecretory, and<br />

spasmolytic properties. Inhibits NF-kB and activation of MAP kinase.<br />

PPM- 8 529570 (2-Benzoylamino-1,4-naphthoquinone)<br />

A novel, cell-permeable, anti-inflammatory agent that inhibits the<br />

expression of inducible nitric oxide synthase (iNOS; IC 50 ~5 mM). Acts<br />

by blocking the activation of NF-kB in vitro and in vivo.<br />

Sulfasalazine 573500 {5-[4-(2-Pyridylsulfamoyl)phenylazo]salicylic Acid; SSZ}<br />

A cell-permeable, anti-inflammatory agent that acts as an inhibitor<br />

of glutathione S-transferase (IC 50 = 0 mM in H-69 cell line). Prevents<br />

NF-kB activation and induces apoptosis in T lymphocytes.<br />

TIRAP <strong>Inhibitor</strong> Peptide,<br />

Cell-Permeable<br />

TIRAP <strong>Inhibitor</strong> Peptide, Control,<br />

Cell-Permeable<br />

613570 [Ant-Tirap 138-151 ; Mal Peptide; MyD88-Adapter-Like Peptide; TIRAP<br />

Peptide; Toll-interleukin 1 Receptor (TIR) domain-containing Adapter<br />

Protein Peptide]<br />

A cell-permeable, synthetic peptide corresponding to mouse tollinterleukin<br />

receptor (TIR) domain-containing adapter protein<br />

38– 5 (TIRAP) fused to the Drosophila Antennapedia sequence.<br />

Specifically inhibits LPS-induced, but not CpG-induced, NF-kB<br />

activation, PKR phosphorylation, and JNK phosphorylation in RAW.kB<br />

cells at ~40 mM. Also reported to block IkBa degradation.<br />

613571 [Ant-Tirap 151-138 ; Mal Peptide; MyD88-Adapter Like Peptide; TIRAP<br />

Peptide, Control; Toll-interleukin 1 Receptor (TIR) domain-containing<br />

Adapter Protein Peptide]<br />

A cell-permeable, synthetic peptide containing mouse tollinterleukin<br />

receptor (TIR) domain-containing adapter protein 5 –<br />

38 reverse sequence (TIRAP) fused to the Drosophila Antennapedia<br />

sequence. Serves as a control for TIRAP <strong>Inhibitor</strong> Peptide (Cat. No.<br />

6 3570).<br />

5 mg $ 8<br />

500 mg $ 57<br />

500 mg $ 57<br />

5 mg $82<br />

50 mg $62<br />

0 mg $98<br />

00 mg $33<br />

mg $207<br />

mg $207<br />

56 Orders Phone 800 854 34 7<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Fax 800 776 0999<br />

Web www.emdbiosciences.com/calbiochem


Phosphodiesterase (PDE) <strong>Inhibitor</strong>s<br />

cAMP and cGMP, two important second messengers<br />

molecules are hydrolyzed by phosphodiesterases (PDEs)<br />

in the cell, leading to cessation of cAMP and cGMPdependent<br />

effects. PDEs comprise a large group of<br />

enzymes organized into 11 distinct families based on<br />

their biochemical and molecular properties. Many of<br />

these isozymes are differently expressed and regulated<br />

in different cells and exhibit distinct selectivity for<br />

cAMP and cGMP.<br />

PDEs contain three functional domains: a regulatory Nterminus,<br />

a central catalytic domain, and a regulatory Cterminus.<br />

All isozymes exhibit significant homology in<br />

their catalytic domain. The N- and C-terminal domains<br />

also display moderate homology within families and<br />

impart specific characteristics to different subtypes.<br />

The N-terminus is involved in allosteric regulation and<br />

membrane targeting. The C-terminus is believed to be<br />

involved in dimerization and possess docking sites for<br />

PDE-specific kinases.<br />

Due to their involvement in inflammation, asthma, and<br />

cardiovascular complications, PDEs are considered to<br />

be attractive targets for pharmacological intervention.<br />

A number of PDE inhibitors have been developed that<br />

target specific isoenzymes, thereby increasing tissue<br />

selectivity and minimizing any side effects.<br />

Phosphodiesterase <strong>Inhibitor</strong>s<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Other <strong>Inhibitor</strong>s of Biological Interest<br />

Product Cat. No. Comments Size Price<br />

Calmidazolium Chloride 208665 (Compound R 24571)<br />

A cell-permeable analog of sepazonium that is at least 50 times<br />

more potent than Trifluoperazine (Cat. No. 642 50) as an inhibitor of<br />

brain PDE I (IC 50 = 0 nM).<br />

Chlorpromazine, Hydrochloride 215921 {2-Chloro-10-[3´-(dimethylamino)propyl]phenothiazine, HCl}<br />

An inhibitor of PDE I (IC 50 = 7 mM). Acts as a peripheral vasodilator.<br />

Cilostamide 231085 [N-Cyclohexyl-N-methyl-4-(1,2-dihydro-2-oxo-6quinolyloxy)butyramide;<br />

OPC 3689]<br />

A cell-permeable, selective inhibitor of PDE III (IC 50 = 70 nM).<br />

Denbufylline 253500 [1,3-Di-n-butyl-7-(2´-oxopropyl)xanthine]<br />

A cell-permeable, xanthine derivative that acts as a selective<br />

inhibitor of phosphodiesterase IV (PDE IV; K i ~ mM).<br />

0 mg $93<br />

500 mg $57<br />

0 mg $ 5<br />

5 mg $ 8<br />

Dipyridamole 322328 A cell-permeable, selective inhibitor of PDE V (IC 50 = 900 nM). 00 mg $34<br />

EHNA, Hydrochloride 324630 [erythro-9-(2-Hydroxy-3-nonyl)adenine, HCl]<br />

A cell-permeable, potent inhibitor of PDE II (IC 50 = 800 nM). Does not<br />

inhibit other PDE isozymes (IC 50 > 00 mM).<br />

Etazolate, Hydrochloride 331500 {1-Ethyl-4-[(1-methylethylidene)hydrazino]-1H-pyrazolo<br />

[3,4-b]pyridine-5-carboxylic Acid Ethyl Ester, HCl; SQ20009}<br />

A selective inhibitor of PDE IV (IC 50 = 2 mM).<br />

Classification of Phosphodiesterases<br />

PDE Regulatory Mechanism Tissue Distribution<br />

I Ca 2+ /CaM-stimulated Heart, brain, lung, smooth<br />

muscle<br />

II cGMP-stimulated Adrenals, heart, lung, liver,<br />

platelets<br />

III cGMP-inhibited, Heart, lung, liver, platelets,<br />

adipose tissue<br />

IV cAMP-specific Kidney, brain, liver, lung, Sertoli<br />

cells<br />

V cGMP-specific Lung, platelets, smooth muscle<br />

VI Photoreceptor cGMPspecific<br />

VII cAMP-specific, highaffinity,rolipraminsensitive<br />

VIII cAMP-selective, IBMX-<br />

insensitive<br />

IX cGMP-selective, IBMX<br />

insensitive<br />

Photoreceptors<br />

Skeletal muscle, heart, kidney,<br />

brain, pancreas, T cells<br />

Testes, eye, liver, skeletal<br />

muscle, heart, kidney, ovary,<br />

brain, T cells<br />

Kidney, liver, lung, brain<br />

X cGMP-sensitive Testes, brain<br />

XI cGMP-sensitive, dual-<br />

specificity<br />

Skeletal muscle, prostrate,<br />

kidney, liver, pituitary, salivary<br />

glands, testes<br />

More online... www.calbiochem.com/inhibitors/PDE<br />

0 mg $55<br />

5 mg $75<br />

Technical Support<br />

Phone 800 628 8470<br />

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57


Other <strong>Inhibitor</strong>s of Biological Interest<br />

Phosphodiesterase <strong>Inhibitor</strong>s, continued<br />

Product Cat. No. Comments Size Price<br />

3-Isobutyl- -methylxanthine 410957 (IBMX)<br />

8-Methoxymethyl-3-isobutyl- -<br />

methylxanthine<br />

4-{[3´,4´-(Methylenedioxy)benzyl]<br />

amino}-6-methoxyquinazoline<br />

A cell-permeable, non-specific inhibitor of cAMP and cGMP<br />

phosphodiesterases (IC 50 = 2–50 mM).<br />

454202 (8-Methoxymethyl-IBMX)<br />

A cell-permeable, selective inhibitor of PDE I (IC 50 = 4 mM).<br />

58 Orders Phone 800 854 34 7<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Fax 800 776 0999<br />

Web www.emdbiosciences.com/calbiochem<br />

250 mg<br />

g<br />

$45<br />

$ 7<br />

0 mg $ 0<br />

475250 A potent and specific inhibitor of PDE V (IC 50 = 230 nM). mg $69<br />

Milrinone 475840 [1,6-Dihydro-2-methyl-6-oxo-(3,4´-bipyridine)-5-carbonitrile]<br />

A cell-permeable, selective inhibitor of PDE III (IC 50 = 300 nM).<br />

MY-5445 474925 [1-(3-Chlorophenylamino)-4-phenylphthalazine]<br />

A cell-permeable, selective inhibitor of PDE V (IC 50 = 600 nM).<br />

N Phosphodiesterase 4 <strong>Inhibitor</strong> 524717 [3,5-Dimethyl-1-(3-nitrophenyl)-1H-pyrazole-4-carboxylic acid ethyl<br />

ester]<br />

A high-affinity active site binding inhibitor of phosphodiesterases<br />

IVB and IVD (IC 50 = 33 and 2 nM, respectively).<br />

Phosphodiesterase V <strong>Inhibitor</strong> II 524714 (PDE V <strong>Inhibitor</strong> II)<br />

A cell-permeable, potent, and highly selective phosphodiesterase V<br />

inhibitor (IC 50 = 5 nM for bovine aorta PDE V; IC 50 > 0 mM for human<br />

recombinant PDE I & III, and for bovine aorta PDE II & IV).<br />

Ro-20- 724 557502 [4-(3-Butoxy-4-methoxybenzyl)-2-imidazolidinone]<br />

A cell-permeable, selective inhibitor of PDE IV (IC 50 = 2 mM).<br />

Rolipram 557330 {4-[3-(Cyclopentyloxy)-4-methoxyphenyl]-2-pyrrolidinone}<br />

A cell-permeable, selective and competitive inhibitor of PDE IV<br />

(IC 50 = 800 nM). Does not inhibit PDE I or PDE II, even at<br />

00 mM. Only a weak inhibitor of PDE III (IC 50 = 00 mM). A rolipraminsensitive<br />

PDE IV subtype is also known to exist.<br />

Trequinsin, Hydrochloride 382425 [9,10-Dimethoxy-2-mesitylimino-3-methyl-2,3,6,7-tetrahydro-4Hpyrimido-(6,1-a)-isoquinolin-4-one,<br />

HCl; HL 725]<br />

A cell-permeable and extremely potent inhibitor of PDE III<br />

(IC 50 = 300 pM) and platelet aggregation in vitro.<br />

0 mg $ 75<br />

0 mg $ 7<br />

0 mg $ 29<br />

5 mg $84<br />

00 mg $6<br />

5 mg $ 28<br />

0 mg $ 82<br />

Vinpocetine 677500 A selective inhibitor of PDE I (IC 50 = 20 mM). 20 mg $67<br />

W-5, Hydrochloride 681625 [N-(6-Aminohexyl)-1-naphthalenesulfonamide, HCl]<br />

A cell-permeable, calmodulin antagonist that inhibits PDE I<br />

(IC 50 = 240 mM).<br />

W-7, Hydrochloride 681629 [N-(6-Aminohexyl)-5-chloro-1-naphthalenesulfonamide, HCl]<br />

A calmodulin antagonist that inhibits PDE I (IC 50 = 28 mM). A cerebral<br />

vasodilator.<br />

W- 2, Hydrochloride 681635 [N-(4-Aminobutyl)-2-naphthalenesulfonamide, HCl]<br />

A calmodulin antagonist that inhibits PDE I (IC 50 = 260 mM).<br />

W- 3, Hydrochloride 681636 [N-(4-Aminobutyl)-5-chloro-2-naphthalenesulfonamide, HCl]<br />

A calmodulin antagonist that inhibits PDE I (IC 50 = 68 mM).<br />

Zaprinast 684500 {1,4-Dihydro-5-(2-propoxyphenyl)-7H-1,2,3-triazolo<br />

[4,5-d]pyrimidine-7-one; M&B22948}<br />

Phosphodiesterase <strong>Inhibitor</strong> Set I<br />

A cell-permeable, selective inhibitor of PDE V (IC 50 = 450 nM). Inhibits<br />

PDE IX at much higher concentrations (IC 50 = 35 mM).<br />

mg $77<br />

0 mg $77<br />

mg $77<br />

mg $77<br />

25 mg $49<br />

Provided as a set of 4 vials. Each set contains 0 mg of 8-Methoxymethyl-3-isobutyl- -methylxanthine (Cat. No. 454202), a Ca 2+ /CaM-dependent<br />

PDE (PDE I) inhibitor; mg of 4-{[3,4 -(Methylenedioxy)benzyl]amino}-6-methoxyquinazoline (Cat. No. 475250), a cGMP-specific PDE (PDE V)<br />

inhibitor; 5 mg of Rolipram (Cat. No. 557330), a cAMP-specific PDE (PDE IV) inhibitor; and 0 mg of Trequinsin, Hydrochloride (Cat. No. 382425), a<br />

cGMP-inhibited PDE (PDE III) inhibitor.<br />

Cat. No. 524718 1 set $347


Plasminogen Activator <strong>Inhibitor</strong>s<br />

Tissue plasminogen activator (tPA) and urokinase<br />

plasminogen activator (uPA) and their inhibitor,<br />

plasminogen activator inhibitor 1 (PAI-1) are<br />

involved in the regulation of tissue morphogenesis<br />

and differentiation. Plasminogen activator-mediated<br />

extracellular matrix degradation plays an important<br />

role in the development of tumors and tumor metastasis.<br />

Over-expressed tPA and uPA systems are reported in<br />

patients with aggressive metastasizing tumors. Hence,<br />

inhibition of plasminogen activation is an important<br />

pharmacological target for blocking metastasis and<br />

reducing primary tumor growth.<br />

tPA is a serine protease that converts plasminogen to<br />

plasmin and can trigger the degradation of extracellular<br />

matrix proteins. The tPA/plasmin proteolytic system has<br />

been implicated in both physiological and pathological<br />

processes. In the brain tPA promotes events associated<br />

with synaptic plasticity such as motor learning and<br />

long-term potentiation. Under non-inflammatory<br />

conditions it also contributes to excitotoxic neuronal<br />

Plasminogen Activator <strong>Inhibitor</strong>s<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Other <strong>Inhibitor</strong>s of Biological Interest<br />

death. Outside the nervous system tPA is mainly found<br />

in the blood, where it functions as a thrombolytic<br />

enzyme and prevents excess fibrin accumulation in<br />

vessels.<br />

PAI-1, a serine proteinase inhibitor, is a 50 kDa<br />

glycoprotein that acts as an important physiological<br />

inhibitor of tPA and uPA. It plays a crucial role in the<br />

regulation of vascular thrombosis, tumor invasion,<br />

neovascularization, and inflammation. Higher plasma<br />

levels of PAI-1 are correlated with an increased risk for<br />

cardiovascular diseases.<br />

References:<br />

Stabuc, B., et al. 2003. Oncology Reports 10, 635.<br />

Wang, Q., and Shaltiel, S. 2003. BMC Biochemistry 4, 5.<br />

Robert, C., et al. 999. Clin. Cancer Res. 5, 2094.<br />

Chintala, S.K. 996. Frontiers Biosci. 1, 324.<br />

Product Cat. No. Comments Size Price<br />

Amiloride, Hydrochloride 129876 A competitive inhibitor of uPA activity (K i = 7 mM). 00 mg $4<br />

Plasminogen Activator <strong>Inhibitor</strong>- ,<br />

Human, Recombinant<br />

Plasminogen Activator <strong>Inhibitor</strong>- ,<br />

Mutant, Human, Recombinant<br />

Plasminogen Activator <strong>Inhibitor</strong>- ,<br />

Mutant, Mouse, Recombinant<br />

Plasminogen Activator <strong>Inhibitor</strong>- ,<br />

Rat, Recombinant<br />

More online... www.calbiochem.com/inhibitors/PA<br />

528205 (PAI-1)<br />

Primary inhibitor of both tPA and uPA. PAI- is synthesized by<br />

vascular epithelium and hepatocytes. Used as a marker for acute<br />

myocardial infarction and in the diagnosis of several thrombolytic<br />

disorders. Elevated levels are found in subjects with accelerated<br />

coronary artery disease. May serve as an independent and strong<br />

prognostic factor in breast cancer patients. Patients having elevated<br />

levels of PAI- in their primary tumors are more prone to relapse.<br />

528208 (PAI-1, Mutant)<br />

Highly purified preparation of an altered form of human PAI-<br />

containing four mutated amino acids. Mutant PAI- is virtually<br />

unable to go latent and is stable at elevated temperature and pH for<br />

extended periods of time (t ½ = 45 h at 37˚C, pH 7.4). Inhibits uPA<br />

(K i = 5. x 0 6 M - sec - ) and tPA (K i = 7.9 x 0 5 M - sec - ).<br />

528213 (PAI-1)<br />

This inhibitor contains a single minor conservative amino acid<br />

substitution Ile 9 →Leu 9 that gives the inhibitor increased half life<br />

(about 4-fold increase over the native recombinant form). Stable<br />

when stored at or below pH 6.6. Has good stability with t ½ = 8–9 h<br />

at 25˚C, pH 7.4.<br />

528214 (PAI-1)<br />

Inhibits human uPA (K i = 6.3 x 0 6 M - sec - ). Stable when stored at or<br />

below pH 6.6.<br />

50 mg $200<br />

50 mg $ 95<br />

50 mg $ 95<br />

50 mg $ 95<br />

Technical Support<br />

Phone 800 628 8470<br />

E-mail calbiochem@emdbiosciences.com<br />

59


Other <strong>Inhibitor</strong>s of Biological Interest<br />

Protein Methtyltransferase <strong>Inhibitor</strong>s<br />

Product Cat. No. Comments Size Price<br />

N Protein Arginine<br />

539209 (PRMT <strong>Inhibitor</strong>, AMI-1)<br />

5 mg $95<br />

N-Methyltransferase<br />

<strong>Inhibitor</strong>, AMI-<br />

A cell-permeable, potent, specific and non-AdoMet (S-adenosyl-L-methionine,<br />

SAM)-competitive inhibitor of protein arginine N-methyltransferases (PRMTs;<br />

IC = 8.8 mM for PRMT and 3.03 for yeast-RMT p) with minimal effect on lysine<br />

50<br />

methyltransferases.<br />

N Protein Synthesis 539690 3,4,5,6-Tetrabromofluorescein<br />

25 mg $ 42<br />

Initiation <strong>Inhibitor</strong>, NSC<br />

9889<br />

A cell-permeable, AdoMet (SAM) competitive inhibitor of protein arginine and<br />

lysine methyltransferases (IC = .4 mM and 780 nM for human and yeast<br />

50<br />

arginine methyl transferases, respectively).<br />

Protein Synthesis <strong>Inhibitor</strong>s<br />

Many inhibitors used to block protein synthesis are<br />

either antibiotics or toxins. Their mechanism of action<br />

includes the interruption of peptide-chain elongation,<br />

blocking the A site of ribosomes, and misreading<br />

Protein Synthesis <strong>Inhibitor</strong>s<br />

of the genetic code. Some of them may also prevent<br />

the attachment of oligosaccharide side chains to<br />

glycoproteins.<br />

Product Cat. No. Comments Size Price<br />

Anisomycin, Streptomyces<br />

griseolus<br />

Blasticidin S, Hydrochloride,<br />

Streptomyces griseochromogenes<br />

176880 [2-(p-Methoxybenzyl)-3,4-pyrrolidinediol-3-acetate]<br />

A reversible inhibitor of protein synthesis at the translation step. An<br />

activator of p38 and SAPK in mammalian cells.<br />

203350 Nucleoside antibiotic that specifically inhibits protein synthesis in<br />

both prokaryotes and eukaryotes.<br />

Chloramphenicol 220551 Inhibits protein synthesis by binding to the 50S ribosomal subunit<br />

and blocking the formation of the peptide bond by inhibiting peptidyl<br />

transferase activity. It is a potent inhibitor of mitochondrial protein<br />

synthesis in eukaryotic cells.<br />

Cycloheximide 239763 An antifungal antibiotic that inhibits protein synthesis in eukaryotes<br />

but not in prokaryotes. Interacts directly with the translocase<br />

enzyme, interfering with the translocation step. Inhibits cell-free<br />

protein synthesis in eukaryotes.<br />

InSolution Cycloheximide 239765 A 00 mg/ml DMSO solution (sterile-filtered) of cycloheximide<br />

(Cat. No. 239763) in DMSO.<br />

Cycloheximide, High Purity 239764 An antifungal antibiotic that inhibits protein synthesis in eukaryotes<br />

but not in prokaryotes. Interacts directly with the translocase<br />

enzyme, interfering with the translocation step. Inhibits cell-free<br />

protein synthesis in eukaryotes.<br />

Emetine, Dihydrochloride 324693 (6´,7´,10,11-Tetramethoxyemetan, 2HCl)<br />

An irreversible inhibitor of protein synthesis in eukaryotes. Blocks<br />

the movement of ribosomes along the mRNA.<br />

Erythromycin, Streptomyces<br />

erythreus<br />

329815 (Erythromycin A)<br />

Inhibits bacterial protein synthesis by binding to 70S ribosomes<br />

and stimulating the dissociation of peptidyl-tRNA from ribosomes.<br />

Inhibits elongation of the protein by peptidyltransferase that forms<br />

peptide bonds between the amino acids, by preventing the ribosome<br />

from translocating down the mRNA.<br />

G 4 8 Sulfate, Cell Culture Tested 345810 An aminoglycoside antibiotic related to gentamycin that irreversibly<br />

binds to ribosomes and inhibits protein synthesis in prokaryotic and<br />

eukaryotes.<br />

KU = kilounits or 000 units; MU = million units<br />

More online... www.calbiochem.com/inhibitors/PS<br />

0 mg $45<br />

25 mg $98<br />

60 Orders Phone 800 854 34 7<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Fax 800 776 0999<br />

Web www.emdbiosciences.com/calbiochem<br />

25 g<br />

00 g<br />

500 g<br />

g<br />

5 g<br />

00 mg<br />

g<br />

$39<br />

$ 4<br />

$499<br />

$57<br />

$ 68<br />

ml $59<br />

$34<br />

$ 22<br />

250 mg $53<br />

5 g<br />

25 g<br />

250 mg<br />

500 mg<br />

g<br />

5 g<br />

25 g<br />

$38<br />

$ 00<br />

$35<br />

$45<br />

$59<br />

$ 86<br />

$826


Protein Synthesis <strong>Inhibitor</strong>s, continued<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Other <strong>Inhibitor</strong>s of Biological Interest<br />

Product Cat. No. Comments Size Price<br />

G 4 8 Sulfate, Sterile-Filtered<br />

Aqueous Solution, Cell Culture<br />

Tested<br />

345812 An aminoglycoside antibiotic related to gentamycin that irreversibly<br />

binds to ribosomes and inhibits protein synthesis in prokaryotic and<br />

eukaryotes. Sterile-filtered solution of Cat. No. 3458 0 supplied at<br />

50 mg/ml.<br />

Hygromycin B, Streptomyces sp. 400051 An aminoglycoside antibiotic that blocks protein synthesis in<br />

prokaryotes and eukaryotes.<br />

Kanamycin Sulfate, Streptomyces<br />

kanamyceticus<br />

Kanamycin Sulfate, Streptomyces<br />

kanamyceticus, Cell Culture-Tested<br />

N Protein Synthesis Initiation<br />

<strong>Inhibitor</strong>, NSC 9889<br />

420311 (Kamycin)<br />

An inhibitor of protein biosynthesis that acts on the 70S ribosome,<br />

causing misreading of the genetic code.<br />

420411 An inhibitor of protein biosynthesis that acts on the 70S ribosome,<br />

causing misreading of the genetic code.<br />

539690 (3,4,5,6-Tetrabromofluorescein)<br />

A cell-permeable, AdoMet (SAM) competitive inhibitor of protein<br />

arginine and lysine methyltransferases (IC = .4 mM and 780 nM<br />

50<br />

for human and yeast arginine methyl transferases, respectively).<br />

Puromycin, Dihydrochloride 540222 [3´-(a-Amino-p-methoxyhydrocinnamamido)-3´-deoxy-N,Ndimethyladenosine,<br />

2HCl]<br />

An aminonucleoside antibiotic that acts as a prokaryotic and<br />

eukaryotic protein synthesis inhibitor. Resembles the aminoacyladenylyl<br />

terminus of aminoacyl-tRNA and competes for binding to<br />

the ”A site“ of the large ribosomal subunit.<br />

Puromycin, Dihydrochloride, Cell<br />

Culture-Tested<br />

Spectinomycin, Dihydrochloride,<br />

Pentahydrate, Streptomyces sp.<br />

Streptomycin Sulfate,<br />

Streptomyces sp.<br />

540411 An aminonucleoside antibiotic that acts as a prokaryotic and<br />

eukaryotic protein synthesis inhibitor. Resembles the aminoacyladenylyl<br />

terminus of aminoacyl-tRNA and competes for binding to<br />

the ”A site“ of the large ribosomal subunit.<br />

567570 Inhibits protein synthesis by binding to the 30S ribosomal subunit to<br />

prevent the formation of an initiation complex with messenger RNA.<br />

5711 Binds irreversibly to the 30S subunit of bacterial ribosomes and<br />

prevent the 50S ribosomal subunit from attaching to the translation<br />

initiation complex. Inhibits initiation, elongation, and termination<br />

of protein synthesis in prokaryotes and induces misreading of the<br />

genetic code.<br />

Tetracycline, Hydrochloride 58346 An antibiotic that inhibits bacterial protein synthesis by reversibly<br />

binding to the 30S ribosomal subunit, preventing binding of<br />

aminoacyl tRNA to the A-site and blocking translocation.<br />

Tetracycline, Hydrochloride, Cell<br />

Culture-Tested<br />

583411 An antibiotic that inhibits bacterial protein synthesis by reversibly<br />

binding to the 30S ribosomal subunit, preventing binding of<br />

aminoacyl tRNA to the A-site and blocking translocation.<br />

Thiostrepton 598226 Inhibits bacterial protein synthesis and ribosomal GTPase activity by<br />

binding non-covalently, but virtually irreversibly, to the 23S rRNA in<br />

the GTPase center of the 50S subunit. Thiostrepton binding directly<br />

prevents elongation factor G binding to the ribosome.<br />

Tobramycin, Free Base 614005 Binds irreversibly to the 30S subunit of bacterial ribosomes and<br />

prevents the 50S ribosomal subunit from attaching to the translation<br />

initiation complex.<br />

0 ml<br />

20 ml<br />

50 ml<br />

00 KU<br />

MU<br />

5 MU<br />

0 MU<br />

5 g<br />

25 g<br />

5 g<br />

25 g<br />

$50<br />

$90<br />

$ 6<br />

$39<br />

$ 22<br />

$478<br />

$849<br />

$50<br />

$ 95<br />

$60<br />

$225<br />

25 mg $ 42<br />

25 mg<br />

00 mg<br />

25 mg<br />

00 mg<br />

$39<br />

$ 37<br />

$48<br />

$ 57<br />

0 g $ 2<br />

00 g $47<br />

0 g<br />

25 g<br />

50 g<br />

0 g<br />

25 g<br />

50 g<br />

g<br />

0 g<br />

$29<br />

$39<br />

$72<br />

$39<br />

$57<br />

$ 0<br />

$76<br />

$504<br />

00 mg $49<br />

Technical Support<br />

Phone 800 628 8470<br />

E-mail calbiochem@emdbiosciences.com<br />

6


Other <strong>Inhibitor</strong>s of Biological Interest<br />

Sonic Hedgehog Signaling <strong>Inhibitor</strong>s<br />

Mammalian Hedgehog proteins include Sonic Hedgehog<br />

(Shh), Indian Hedgehog (Ihh), and Desert Hedgehog (Dhh).<br />

Shh is expressed mainly in the epithelia in the tooth, hair,<br />

whisker, gut, bladder, urethra, vas deferens, and lung, Dhh<br />

is found in Schwann and Sertoli cell precursors and Ihh is<br />

expressed in gut and cartilage. Hedgehog proteins undergo<br />

autocatalysis to generate a ~20 kDa N-terminal domain<br />

and a ~25 kDa C-terminal domain. This autoprocessing<br />

causes the covalent attachment of cholesterol onto the<br />

carboxy-terminus of the N-terminal domain. The Nterminal<br />

domain retains all signaling capabilities while the<br />

C-terminal domain is responsible for the intramolecular<br />

precursor processing. The cholesterol moiety is believed<br />

to be responsible for directing Hedgehog traffic in the<br />

secretory cell.<br />

Shh, a secreted morphogen, has been implicated in several<br />

embryonic developmental processes. It displays inductive,<br />

proliferative, neurotrophic, and neuroprotective properties.<br />

Shh often works in concert with the Wnt signaling protein<br />

in setting embryonic patterns. The Wnt pathway uses bcatenin<br />

to transduce its signals to the nucleus; however,<br />

the Shh pathway utilizes a 155 amino acid protein, Cubitus<br />

interruptus (Ci155) in Drosophila or Gli in mammals. In<br />

the absence of a Shh signal, Ci is targeted for proteolysis,<br />

which generates a truncated 75-amino acid residues form<br />

(Ci75) that acts as a transcriptional repressor. In vertebrates<br />

three Gli proteins (Gli1, Gli2, and Gli3) have been reported.<br />

Despite several homologous regions, including a DNAbinding<br />

domain with five C2-H2 zinc fingers and a Cterminal<br />

transcription activation domain, these proteins<br />

have distinct activities and are not considered to be<br />

functionally equivalent.<br />

Sonic Hedgehog Signaling <strong>Inhibitor</strong>s<br />

Shh signaling is known to occur through a receptor<br />

complex associating two membrane proteins, Patched (Ptc)<br />

and Smoothened (Smo). Ptc is a twelve-pass membrane<br />

protein that acts as a receptor and binds Hedgehog ligand;<br />

Smo is a seven-pass membrane protein that acts as a signal<br />

transducer. In the absence of a ligand, Ptc interacts with<br />

Smo and inhibits its activity. Shh binding to Ptc removes<br />

the inhibitory effect and allows Gli to enter the nucleus and<br />

act as a transcriptional activator. Shh signaling is required<br />

throughout embryonic development and is involved in the<br />

determination of cell fate and embryonic patterning during<br />

early vertebrate development. During the late stage of<br />

development, Shh is involved in the proper formation of a<br />

variety of tissues and organs. Shh also functions with other<br />

signaling molecules such as the fibroblast growth factors<br />

and bone morphogenetic protein to mediate developmental<br />

processes. Mutations in any of the components of the<br />

Shh pathway can lead to congenital defects and diseases,<br />

including cancer. Hence, the Shh pathway has become a<br />

potential target for drug development for the treatment of<br />

cancers and degenerative diseases.<br />

References:<br />

Lum, L., and Beachy, P.A. 2004. Science 304, 755.<br />

Wetmore, C. 2003. Curr. Opin. Genet. Dev. 13, 34.<br />

Pola, R., et al. 200 . Nat. Med. 7, 706.<br />

Chuong, C.M., et al. 2000. Cell. Mol. Life Sci.57, 692.<br />

McMahon, A.P. 2000. Cell 100, 85.<br />

Pepinsky, R.B., et al. 998. J. Biol. Chem. 273, 4037.<br />

Porter, J.A., et al. 996. Science 274, 255.<br />

More online... www.calbiochem.com/inhibitors/Shh<br />

Product Cat. No. Comments Size Price<br />

AY 9944 190080 A cell-permeable inhibitor of 7-dehydrocholesterol reductase<br />

(D7-sterol reductase). Also reported to induce a rapid and irreversible<br />

reduction in acidic-sphingomyelinase activity in fibroblasts.<br />

Cyclopamine, V. californicum 239803 A steroidal alkaloid and cholesterol mimic that disrupts cholesterol<br />

bio-synthesis and specifically antagonizes Shh signaling through<br />

direct interaction with Smo (smoothened).<br />

N Cyclopamine-KAAD 239804 [KAAD-Cyclopamine; 3-Keto-N-(aminoethyl-aminocaproyl-dihydro-<br />

cinnamoyl)cyclopamine]<br />

A potent, cell-permeable analog of Cyclopamine (Cat. No. 239803)<br />

that inhibits the Hedgehog signaling with similar or lower toxicity<br />

(IC 50 = 20 nM in Shh-LIGHT2 assay).<br />

Jervine 420210 [(3b, 23b)-17,23-Epoxy-3-hydroxyveratraman-11-one; 11-<br />

Ketocyclopamine]<br />

A cell-permeable inhibitor that induces cyclopia by blocking Shh<br />

signaling (IC 50 = 500 –700 nM in S 2 cells).<br />

5 mg $ 5<br />

mg $ 2<br />

00 mg $ 32<br />

mg $95<br />

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Sonic Hedgehog Signaling <strong>Inhibitor</strong>s, continued<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Other <strong>Inhibitor</strong>s of Biological Interest<br />

Product Cat. No. Comments Size Price<br />

SANT- 559303 A potent antagonist of the Shh signaling (IC 50 = 20 nM in the Shh-<br />

LIGHT2 assay and in Ptch -l- cells) that acts by binding directly<br />

to Smoothened (Smo; K d = .2 nM). Unlike cyclopamine (Cat. No.<br />

239803), SANT- equipotently inhibits the activities of both wildtype<br />

and oncogenic Smo (IC 50 = 30 nM in SmoA -LIGHT2 assay).<br />

Tomatidine, HCl 614350 A steroidal alkaloid that structurally resembles Cyclopamine (Cat. No.<br />

239803), but lacks the capacity to inhibit Shh signaling.<br />

U 8666A 662015 [3b-(2-Diethylaminoethoxy)androst-5-en-17-one, HCl]<br />

A cell-permeable, amphiphilic amino-steroid that alters intracellular<br />

membrane protein trafficking by impairing intracellular biosynthesis<br />

and transport of LDL-derived cholesterol, presumably via its<br />

inhibitory effect on 2,3-oxidosqualene-lanosterol cyclase activity.<br />

Also reported to inhibit the activity of D8-sterol isomerase.<br />

Stem Cell Proliferation <strong>Inhibitor</strong>s<br />

Product Cat. No. Comments Size Price<br />

Stem Cell Proliferation <strong>Inhibitor</strong> 569620 (Ac-SDKP; Goralatide; Seraspenide)<br />

A tetrapeptide that acts as a natural inhibitor of pluripotent<br />

hematopoietic stem cell proliferation. Protects bone marrow<br />

against chemotherapeutic agents, ionizing radiations, hyperthermy,<br />

or phototherapy-induced toxicity. Inhibits cardiac fibroblast<br />

proliferation, collagen synthesis, and activation of p42/p44 MAP<br />

kinases. Cleaved to an inactive form by angiotensin I-converting<br />

enzyme (ACE).<br />

Tautomerase <strong>Inhibitor</strong><br />

To view all Stem Cell-related antibodies, growth factors,<br />

and cell culture reagents, visit our Stem Cell Resource at<br />

www.calbiochem.com/stemcells<br />

5 mg $ 28<br />

Product Cat. No. Comments Size Price<br />

N MIF Antagonist, ISO- 475837 [(S,R)-3-(4-Hydroxyphenyl)-4,5-dihydro-5-isoxazole acetic acid,<br />

methyl ester; Macrophage Migration <strong>Inhibitor</strong>y Factor Antagonist, ISO-1]<br />

A cell-permeable isoxazoline compound that displays antiinflammatory<br />

properties. Inhibits MIF tautomerase activity by<br />

binding to its catalytic active site (IC 50 = 7 mM for D-dopachrome<br />

tautomerase) and suppresses the production of TNFa, PGE 2 , and<br />

COX-2 in human monocytes, and arachidonic acid in RAW 264.7<br />

macrophages. Shown to exhibit antidiabetogenic properties in<br />

immunoinflammatory diabetic mouse model.<br />

5 mg $ 09<br />

25 mg $47<br />

0 mg $90<br />

5 mg $82<br />

Technical Support<br />

Phone 800 628 8470<br />

E-mail calbiochem@emdbiosciences.com<br />

63


<strong>Inhibitor</strong>s: Some Technical Tips<br />

<strong>Inhibitor</strong>s: Some Technical Tips<br />

How much inhibitor should I use?<br />

The amount of inhibitor required depends on various factors, such as target accessibility, cell permeability, duration of incubation,<br />

type of cells used, and others. We recommend surveying the literature to determine the initial concentration. If published K i or IC 50<br />

values are known, use 5–10 times higher inhibitor amounts than these values to maximally inhibit enzyme activity. If K i or IC 50 values<br />

are unknown, then try a wide range of inhibitor concentrations and use Michaelis-Menten kinetics to determine the K i value. It is not<br />

unusual to see either no inhibition or even a reverse effect when high concentrations of inhibitors are used. Always run an appropriate<br />

control to eliminate non-specific effects of the solvent used to solubilize the inhibitor.<br />

What is the difference between EC 50 , ED 50 , K i , IC 50 , and K d , pIC 50 ?<br />

In pharmacology and biochemistry, the following terms are commonly used to determine the efficacy of a drug or inhibitor.<br />

Sometimes, confusion arises when researchers try to repeat experiments without considering the exact term used by the original<br />

investigators.<br />

EC 50 : Clinical efficacy of a drug (concentration required) to produce 50% of the maximum effect (may be inhibitory or<br />

stimulatory effect). This term is used usually with pharmaceuticals.<br />

ED 50 : Median effective dose (as opposed to concentration) at which 50% of individuals exhibit the specified quantal effect.<br />

IC 50 : Concentration required to produce 50% inhibition.<br />

K i : <strong>Inhibitor</strong> concentration at which 50% inhibition is observed (it is calculated using Michaelis-Menten kinetics).<br />

K d : An equilibrium constant for the dissociation of a complex of two or more biomolecules into its components; for<br />

example, pIC 50 dissociation of an inhibitor or substrate from an enzyme.<br />

pIC 50 : The negative logarithm to base 10 of the IC 50 .<br />

How much inhibitor or stimulator should be injected into an animal?<br />

There is no simple answer to this question. Optimize the dose empirically by performing a few preliminary experiments. First<br />

determine if the compound in question is cell-permeable. Also, survey the literature for any reported IC 50 , ED 50 , or EC 50 , values.<br />

Follow the sample calculation given below as a general guide:<br />

H-89, dihydrochloride, a cell-permeable protein kinase A inhibitor, has an IC 50 value of 48 nM. It has a molecular weight of 519.3.<br />

For H-89, 2HCl a 240-480 nM range of H-89 is sufficient to cause maximal inactivation of protein kinase A. To use it in vivo<br />

we have to make a few assumptions. If a rat weighs about 200 g and we assume that 70% of its body weight is water, the volume<br />

of distribution will be approximately 140 ml. In this case 240 nM = 240 nmoles/liter = 124.63 mg/liter. Because the volume of<br />

distribution is about 140 ml, 124.63 × 0.140 = 17.45 mg would be the required amount for injection into the rat. It is important<br />

to note that the drug distribution will vary depending on the mode of injection (intravenous, intramuscular, or intraperitoneal),<br />

bioavailability, half-life, rates of hepatic and renal clearance, binding to proteins, and tissue-specific distribution and accumulation.<br />

The specific tissue uptake may also be limited in whole organs or tissues as compared to isolated cell preparations. In<br />

whole animal studies, sometimes a loading dose is required to achieve the target concentration. This may then be followed by a<br />

sustained infusion to maintain the drug level in the blood. One must always exercise caution and not overdose the animal.<br />

What type of solvent is best suited for dissolving an inhibitor?<br />

In biological experiments water is the most preferred solvent. However, several organic compounds are either not soluble in<br />

water or they degrade rapidly in the presence of moisture. If DMSO is a recommended solvent, use a fresh stock bottle of DMSO<br />

that is deemed free of any moisture. Any contaminating moisture may accelerate the degradation of compound in<br />

question or may render it insoluble.<br />

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Why can’t I make serial dilutions of my DMSO stock solution directly in my buffer?<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

<strong>Inhibitor</strong>s: Some Technical Tips<br />

In some cases this may not be a problem. However, in most cases the organic material will precipitate out of the solution when<br />

added directly to an aqueous medium. It is best to make the initial serial dilutions only in DMSO and then add the final diluted<br />

sample to your buffer or the cell culture medium. Also, the compound may be soluble in aqueous medium only at its working<br />

concentration.<br />

Which protein kinase inhibitor is best suited for my experiment?<br />

If the mechanism involved in phosphorylation is unknown, a broad range inhibitor, such as Staurosporine, should be used<br />

first to determine if indeed a protein kinase is involved. <strong>Second</strong>ly, a more specific inhibitor of PKA (e.g., H-89, Cat. No. 371963, or<br />

8-Br-cAMP, Rp isomer, Cat. No. 116816), PKC (e.g., Bisindolylmaleimide, Cat. No. 203290), or PKG (e.g., KT5823, Cat. No. 420321;<br />

or PKG inhibitor, Cat. No. 370654) should be used to eliminate the possibility of more than one kinase. To elucidate the exact<br />

mechanism involved, isozyme specific inhibitors, such as for PKC isozymes, can be used.<br />

How can I determine if a caspase inhibitor is reversible or irreversible?<br />

The C-terminal group determines the reversibility or the irreversibility of any caspase inhibitor. In general, caspase inhibitors<br />

with an aldehyde (CHO) group are reversible. The CMK, FMK, and FAOM groups are more reactive and form covalent bonds with<br />

the enzyme, creating an irreversible linkage. FMK is slightly less reactive than CMK and therefore is considered more specific<br />

for the enzyme site being inhibited.<br />

What determines the specificity of a particular caspase inhibitor?<br />

The peptide recognition sequence determines the specificity of the inhibitor for a particular caspase. Sometimes the aspartic acid<br />

residue is esterified to increase cell permeability of the peptide. VAD is a general caspase inhibitor. Earlier it was considered to be<br />

specific for caspase-1 (ICE), however, now it is considered to inhibit even caspase-3 and caspase-4. Addition of a tyrosine residue<br />

(Y) to the sequence (YVAD) makes the inhibitor more specific for caspase-1. The sequence DEVD recognizes caspase-3 and also<br />

caspases-6, -7, -8, and -10.<br />

What are the advantages of using FMK-based caspase inhibitors and how do they differ from<br />

CHO-based inhibitors?<br />

The FMK-based caspase inhibitors covalently modify the thiol group of the enzyme making them irreversible inhibitors.<br />

Generally, at the amine end of the inhibitor we have a benzyloxycarbonyl (Z), biotin, or aceytl (Ac) group. These groups also<br />

increase hydrophobicity of the molecule, which makes them more cell-permeable. Compared to the inhibitors with an Ac or a<br />

biotin group, those inhibitors with a Z-group are even more cell-permeable. <strong>Inhibitor</strong>s with a biotin group can serve as a<br />

detection tool and are useful in tagging the enzyme-inhibitor site.<br />

The CHO-based inhibitors are reversible due to the fact that the thiol group of the enzyme forms an adduct to the carbonyl group<br />

of the aldehyde that is reversible. As a general rule CHO-based inhibitors are hydrated and hence are slow binding. The extent of<br />

their reversibility depends on the pH, metal ion concentration, and other conditions. When the aldehyde group is attached to the<br />

aspartic acid (D-CHO), the product exists as a pseudo acid aldehyde in equilibrium. This makes it somewhat cell-permeable.<br />

What criteria should I use when selecting a protease inhibitor?<br />

When processing cells or tissues assume that active proteases are present in the medium or are being secreted. Hence,<br />

it is important to include protease inhibitors even in the early steps of sample preparation. For best results add protease inhibitors<br />

to the medium just prior to use. Use of inhibitors in buffers stored over a period of time is not recommended. Different cells and<br />

tissue types exhibit different protease profiles. Serine proteases are widely distributed in all cells, bacterial cells contain higher<br />

levels of serine and metalloproteases; animal tissue extracts are rich in serine-, cysteine-, and metalloproteases, and plant<br />

extracts contain higher quantities of serine and cysteine proteases. Additionally, it is important to avoid EDTA when preparing<br />

extracts for IMAC (e.g., His•Tag® purification). If you are not sure of the type of proteases present in the sample, it is best to use<br />

or customize your own cocktails.<br />

Looking for more information?<br />

Keep up to date at our <strong>Inhibitor</strong> Resource<br />

www.calbiochem.com/inhibitors<br />

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65


Index<br />

Alphabetical Index<br />

400W .................................................................................... 0<br />

400W, Immobilized .......................................................... 0<br />

A<br />

A3, Hydrochloride ..............................................9, 29, 33, 43<br />

A77 726 .................................................................................46<br />

AACOCF 3 ..................................................................................93<br />

7-AAG ................................................................................. 49<br />

Ab 40 Fibrillogenesis <strong>Inhibitor</strong> .............................................96<br />

Ab 42 Fibrillogenesis <strong>Inhibitor</strong> I ...........................................96<br />

Ab 42 Fibrillogenesis <strong>Inhibitor</strong> II .........................................96<br />

Ab 42 Fibrillogenesis <strong>Inhibitor</strong> III ........................................96<br />

Ab 42 Fibrillogenesis <strong>Inhibitor</strong> IV ........................................96<br />

ACA ...........................................................................................93<br />

Acetyl- -keto-b-Boswellic Acid,<br />

Boswellia serrata ......................................................82, 9<br />

N-Acetyl-S-farnesyl-L-cysteine ..................................... 44<br />

N-Acetyl-S-geranylgeranyl-L-cysteine (AGGC) ........ 44<br />

Acetyl-Pepstatin ................................................................. 25<br />

Actinomycin D, 7-Amino-...................................................72<br />

Actinomycin D, Streptomyces sp. .....................................72<br />

AdaAhX 3 L 3 VS ........................................................................ 37<br />

AdaLys(bio)AhX 3 L 3 VS ......................................................... 37<br />

Adenosine ............................................................................. 4<br />

Adenosine 3´,5´-cyclic Monophosphorothioate,<br />

2´-O-Monobutyryl-, Rp-Isomer, Sodium Salt .........34<br />

Adenosine 3´,5´-cyclic Monophosphorothioate,<br />

8-Bromo-, Rp-Isomer, Sodium Salt ...........................33<br />

Adenosine 3´,5´-cyclic Monophosphorothioate,<br />

8-Bromo-2´-monobutyryl-, Rp-Isomer,<br />

Sodium Salt ......................................................................33<br />

Adenosine 3´,5´-cyclic Monophosphorothioate,<br />

8-Chloro-, Rp-Isomer, Sodium Salt ...........................33<br />

Adenosine 3´,5´-cyclic Monophosphorothioate,<br />

Rp-Isomer, Triethylammonium Salt ...........................33<br />

Adenylyl Cyclase Toxins <strong>Inhibitor</strong> .................................. 39<br />

Adenylyl Cyclase Type V <strong>Inhibitor</strong>, NKY80................... 39<br />

ADP-HPD, Dihydrate, Ammonium Salt ............................79<br />

AEBSF, Hydrochloride ........................................................ 25<br />

AEBSF, Immobilized ........................................................... 25<br />

AG 9 ..........................................................................................46<br />

AG 7 ........................................................................................46<br />

AG 8 ........................................................................................46<br />

AG 30 ........................................................................................46<br />

AG 43 ........................................................................................46<br />

AG 82 ........................................................................................46<br />

AG 99 ........................................................................................46<br />

AG 2 ......................................................................................46<br />

AG 26 .....................................................................................25<br />

AG 83 .....................................................................................46<br />

AG 2 3 .....................................................................................46<br />

AG 490 .....................................................................................46<br />

AG 490, m-CF 3 .......................................................................46<br />

AG 494 .....................................................................................47<br />

AG 527 .....................................................................................47<br />

AG 537, Bis-Tyrphostin ........................................................47<br />

AG 538 .....................................................................................47<br />

I-OMe-AG 538 .......................................................................47<br />

AG 555 .....................................................................................47<br />

AG 556 .....................................................................................47<br />

AG 592 .....................................................................................47<br />

AG 825 .....................................................................................47<br />

AG 835 .....................................................................................47<br />

AG 879 .....................................................................................47<br />

AG 957 .....................................................................................47<br />

AG 957, Adamantyl Ester ....................................................47<br />

AG 024 ...................................................................................47<br />

AG 295 ...................................................................................47<br />

AG 296 ...................................................................................48<br />

AG 387 ............................................................................48, 82<br />

AG 433 ...................................................................................48<br />

AG 478 ...................................................................................48<br />

InSolution AG 478 ...........................................................48<br />

AGL 2043 .................................................................................48<br />

AGL 2263 .................................................................................48<br />

Akt <strong>Inhibitor</strong> .............................................................................4<br />

Akt <strong>Inhibitor</strong> II ..........................................................................4<br />

Akt <strong>Inhibitor</strong> III ........................................................................4<br />

Akt <strong>Inhibitor</strong> IV ........................................................................4<br />

InSolution Akt <strong>Inhibitor</strong> IV ................................................4<br />

Akt <strong>Inhibitor</strong> V, Triciribine.....................................................4<br />

Akt <strong>Inhibitor</strong> VI, Akt-in ..........................................................4<br />

Akt <strong>Inhibitor</strong> VII, TAT-Akt-in ................................................4<br />

Akt <strong>Inhibitor</strong> VIII, Isozyme-Selective, Akti- /2 ...............4<br />

InSolution Akt <strong>Inhibitor</strong> VIII, Isozyme-Selective,<br />

Akti- /2 ...............................................................................4<br />

Akt <strong>Inhibitor</strong> IX, API-59CJ-OMe .........................................4<br />

Akt <strong>Inhibitor</strong> X ..........................................................................5<br />

ALLM ............................................................................. 5, 25<br />

ALLN ................................................................... 5, 25, 37<br />

InSolution ALLN ...................................................... 5, 25<br />

Aloisine A.......................................................................... 5, 9<br />

Aloisine, RP 06 ............................................................... 5, 9<br />

Alsterpaullone ................................................................. 5, 9<br />

Alsterpaullone, 2-Cyanoethyl .................................... 5, 9<br />

a-Amanitin, Amanita sp. ....................................................72<br />

Methyl a-Amanitin Oleate .................................................72<br />

Amastatin, Streptomyces sp. ........................................... 25<br />

Amiloride, Hydrochloride ........................................ 4 , 59<br />

3-Aminobenzamide ..............................................................79<br />

e-Amino-n-caproic Acid .................................................. 25<br />

Aminogenistein ......................................................................48<br />

Aminoguanidine, Hemisulfate ......................................... 0<br />

-Amino-2-hydroxyguanidine,<br />

p-Toluenesulfonate ...................................................... 0<br />

5-Aminoisoquinolinone, Hydrochloride ..........................79<br />

4-Amino- ,8-naphthalimide .............................................79<br />

Aminopeptidase N <strong>Inhibitor</strong> ............................................ 26<br />

Aminopurvalanol A ............................................................... 5<br />

AMO 6 8 ...............................................................................95<br />

AMPK <strong>Inhibitor</strong>, Compound C ..............................................5<br />

InSolution AMPK <strong>Inhibitor</strong>, Compound C ...............5, 84<br />

Anacardic Acid .......................................................................73<br />

Angiogenesis <strong>Inhibitor</strong> .........................................................48<br />

Angiotensin II, Human ...................................................... 39<br />

Anisomycin, Streptomyces griseolus ............................. 60<br />

Anthrax Lethal Factor, Recombinant,<br />

Bacillus anthracis............................................................25<br />

Anthrax Lethal Factor Protease <strong>Inhibitor</strong>,<br />

In-2-LF ............................................................................. 3<br />

Anthrax Lethal Factor Protease <strong>Inhibitor</strong> III ................ 3<br />

a -Antichymotrypsin, Human Plasma.......................... 26<br />

Antipain, Dihydrochloride ................................................ 26<br />

Antipain, Hydrochloride ................................................... 26<br />

a 2 -Antiplasmin, Human Plasma .................................... 26<br />

Antithrombin III, Human Plasma ................................... 26<br />

a -Antitrypsin, Human Plasma ............................. 8, 26<br />

Aphidicolin ..............................................................................72<br />

Apicidin, Fusarium sp. ..........................................................73<br />

Apoptosis <strong>Inhibitor</strong> ...............................................................67<br />

Apoptosis <strong>Inhibitor</strong> II, NS3694 ..........................................67<br />

Aprotinin, Bovine, Recombinant, Nicotiana sp.<br />

Animal-Free ................................................................... 26<br />

Aprotinin, Bovine Lung, Crystalline ............................... 26<br />

Aprotinin, Bovine Lung, Solution ................................... 26<br />

Arachidonylserotonin ....................................................88, 9<br />

H-Arg-Gly-Asp-OH ...............................................................70<br />

H-Arg-Gly-Asp-Ser-OH .......................................................70<br />

Aristolochic Acid ...................................................................93<br />

Aromatase <strong>Inhibitor</strong> I ........................................................ 4<br />

ATBI, Synthetic .................................................................... 26<br />

Atractyloside, Dipotassium Salt,<br />

Atractylis gummifera .................................................. 5<br />

Atrial Natriuretic Factor -28, Rat ............................... 4<br />

Aurintricarboxylic Acid .................................................77, 82<br />

Australine, Hydrochloride,<br />

Castanospermum australe......................................... 47<br />

Autocamtide-2 Related <strong>Inhibitor</strong>y Peptide ......................7<br />

Autocamtide-2 Related <strong>Inhibitor</strong>y Peptide II ..................7<br />

Autocamtide-2 Related <strong>Inhibitor</strong>y Peptide II,<br />

Cell-permeable ..................................................................7<br />

Autocamtide-2 Related <strong>Inhibitor</strong>y Peptide,<br />

Myristoylated .....................................................................7<br />

AY 9944................................................................................. 62<br />

5-Aza-2´-Deoxycytidine .....................................................7<br />

-Azakenpaullone ................................................................. 9<br />

3´-Azido-3´-deoxythymidine .............................................80<br />

InSolution AZT, Triphosphate,Tetralithium Salt .........80<br />

B<br />

Bafilomycin A , Streptomyces griseus ................ 0 , 42<br />

Baicalein ..................................................................................9<br />

Bax Channel Blocker ............................................................67<br />

Bax-Inhibiting Peptide, Negative Control ......................67<br />

Bax-Inhibiting Peptide, V5 .................................................67<br />

BAY -7082 ................................................................. 70, 54<br />

InSolution BAY -7082 ................................................ 54<br />

BAY -7085 ................................................................. 70, 54<br />

Bcr-abl <strong>Inhibitor</strong> ....................................................................48<br />

BEC, Hydrochloride ............................................................ 04<br />

Benzamidine, Hydrochloride ........................................... 26<br />

Benzyl-2-acetamido-2-deoxy-a-<br />

D-galactopyranoside ................................................... 47<br />

BER Pathway <strong>Inhibitor</strong> (DNA Base Excision Repair<br />

Pathway <strong>Inhibitor</strong>) ..........................................................77<br />

Bestatin ................................................................................. 26<br />

Bestatin Methyl Ester ....................................................... 26<br />

BHQ ........................................................................................ 42<br />

Bisindolylmaleimide I ...........................................................37<br />

InSolution Bisindolylmaleimide I ...................................37<br />

Bisindolylmaleimide I, Hydrochloride ..............................37<br />

Bisindolylmaleimide II..........................................................37<br />

Bisindolylmaleimide III, Hydrochloride ...........................37<br />

Bisindolylmaleimide IV ........................................................37<br />

Bisindolylmaleimide V..........................................................37<br />

Bisindolylmaleimide <strong>Inhibitor</strong> Set ....................................42<br />

Blasticidin S, Hydrochloride, Streptomyces<br />

griseochromogenes ..................................................... 60<br />

(—)-Blebbistatin .................................................................. 42<br />

(+)-Blebbistatin .................................................................. 42<br />

(±)-Blebbistatin .................................................................. 42<br />

InSolution Blebbistatin, Racemic ................................ 42<br />

Bohemine................................................................................. 5<br />

Bongkrekic Acid, Triammonium Salt ............................. 5<br />

BPDQ .........................................................................................48<br />

BPIQ-I .......................................................................................48<br />

BPIQ-II ......................................................................................48<br />

bpV(bipy) ..................................................................................59<br />

bpV(HOpic) ..............................................................................59<br />

bpV(phen) ................................................................................59<br />

bpV(pic) ....................................................................................59<br />

Bromocriptine Mesylate .................................................... 0<br />

BTS .......................................................................................... 42<br />

Bufalin ................................................................................... 42<br />

2,3-Butanedione 2-Monoxime ....................................... 42<br />

Butein .......................................................................................48<br />

N-(n-Butyl)deoxygalactonojirimycin ............................ 47<br />

N-Butyldeoxynojirimycin, Hydrochloride .................... 47<br />

C<br />

CA-074 .................................................................................. 27<br />

CA-074 Me ........................................................................... 27<br />

Caffeic Acid.......................................................... 9 , 05, 8<br />

Calcineurin Autoinhibitory Peptide ..................................59<br />

Calcineurin Autoinhibitory Peptide,<br />

Cell-permeable ................................................................59<br />

Calmidazolium Chloride .......................................... 42, 57<br />

Calmodulin Binding Domain ................................................7<br />

[Ala 286 ]-Ca 2+ /Calmodulin Kinase II<br />

<strong>Inhibitor</strong> 28 -30 .............................................................7<br />

Ca 2+ /Calmodulin Kinase II <strong>Inhibitor</strong> 28 -309 .................7<br />

Calmodulin Kinase IINtide ....................................................7<br />

Calmodulin Kinase IINtide, Myristoylated .......................7<br />

Calpain Activity Assay Kit, Fluorogenic ........................ 6<br />

Calpain <strong>Inhibitor</strong> III ............................................................ 5<br />

Calpain <strong>Inhibitor</strong> IV ............................................................ 5<br />

Calpain <strong>Inhibitor</strong> V .............................................................. 5<br />

Calpain <strong>Inhibitor</strong> VI ............................................................ 5<br />

Calpain <strong>Inhibitor</strong> X .............................................................. 5<br />

Calpain <strong>Inhibitor</strong> XI ............................................................ 5<br />

Calpain <strong>Inhibitor</strong> XII ........................................................... 5<br />

Calpain <strong>Inhibitor</strong> Set .......................................................... 6<br />

Calpain Substrate II, Fluorogenic ................................... 6<br />

Calpain Substrate III, Fluorogenic .................................. 6<br />

Calpain- Substrate, Fluorogenic ................................... 6<br />

Calpain- Substrate II, Fluorogenic ............................... 6<br />

Calpastatin Peptide............................................................. 5<br />

Calpastatin Peptide, Negative Control .......................... 5<br />

Calpastatin, Human Erythrocytes ................................... 5<br />

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Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

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Calpastatin, Human, Recombinant, Domain I ... 5, 27<br />

Calpeptin ..................................................................... 5, 27<br />

Calphostin C, Cladosporium cladosporioides ................37<br />

Calyculin A, Discodermia calyx .........................................59<br />

Camptothecin, 0-Hydroxy-,<br />

Camptotheca acuminata ..............................................82<br />

Camptothecin, Camptotheca acuminata........................82<br />

Cantharidic Acid ....................................................................59<br />

Cantharidin .............................................................................59<br />

CAPE ....................................................................................... 54<br />

(E)-Capsaicin ....................................................................... 54<br />

Captopril ............................................................................... 4<br />

Carbonyl Cyanide m-Chlorophenylhydrazone ........... 5<br />

Carboxyatractyloside, Atractylis gummifera .............. 5<br />

Carboxypeptidase <strong>Inhibitor</strong>, Potato ............................... 27<br />

Cardiotoxin, Naja nigricollis ...............................................37<br />

Casein Kinase I <strong>Inhibitor</strong>, D4476 ........................................9<br />

InSolution Casein Kinase I <strong>Inhibitor</strong>, D4476..........9, 84<br />

Casein Kinase II <strong>Inhibitor</strong> I ...................................................9<br />

InSolution Casein Kinase II <strong>Inhibitor</strong> I ...........................9<br />

Casein Kinase II <strong>Inhibitor</strong> II, DMAT ....................................9<br />

InSolution Casein Kinase II <strong>Inhibitor</strong>, DMAT..........9, 84<br />

Caspase <strong>Inhibitor</strong> I ................................................................64<br />

InSolution Caspase <strong>Inhibitor</strong> I ........................................64<br />

Caspase <strong>Inhibitor</strong> I, Biotin Conjugate..............................64<br />

Caspase <strong>Inhibitor</strong> II ...............................................................64<br />

InSolution Casein Kinase II <strong>Inhibitor</strong> I ...........................9<br />

Caspase <strong>Inhibitor</strong> II, Cell-Permeable ................................64<br />

Caspase <strong>Inhibitor</strong> III .............................................................64<br />

Caspase <strong>Inhibitor</strong> IV .............................................................64<br />

Caspase <strong>Inhibitor</strong> VI .............................................................64<br />

InSolution Caspase <strong>Inhibitor</strong> VI......................................64<br />

Caspase <strong>Inhibitor</strong> VIII ...........................................................64<br />

Caspase <strong>Inhibitor</strong> X ...............................................................64<br />

Caspase <strong>Inhibitor</strong> Set I.........................................................66<br />

Caspase <strong>Inhibitor</strong> Set II .......................................................66<br />

Caspase <strong>Inhibitor</strong> Set III ......................................................66<br />

Caspase <strong>Inhibitor</strong> Set IV ......................................................66<br />

Caspase <strong>Inhibitor</strong>, Negative Control ................................64<br />

Caspase- <strong>Inhibitor</strong> I............................................................64<br />

Caspase- <strong>Inhibitor</strong> II ..........................................................64<br />

Caspase- <strong>Inhibitor</strong> II, Cell-Permeable ...........................64<br />

Caspase- <strong>Inhibitor</strong> II, Biotin Conjugate ........................64<br />

Caspase- <strong>Inhibitor</strong> IV .........................................................64<br />

Caspase- <strong>Inhibitor</strong> V ..........................................................64<br />

Caspase- <strong>Inhibitor</strong> VI .........................................................64<br />

Caspase-2 <strong>Inhibitor</strong> I............................................................64<br />

Caspase-2 <strong>Inhibitor</strong> II ..........................................................64<br />

Caspase-3 <strong>Inhibitor</strong> I............................................................64<br />

Caspase-3 <strong>Inhibitor</strong> I, Biotin Conjugate .........................64<br />

Caspase-3 <strong>Inhibitor</strong> I, Cell-Permeable ............................64<br />

InSolution Caspase-3 <strong>Inhibitor</strong> I, Cell-Permeable ....64<br />

Caspase-3 <strong>Inhibitor</strong> II ..........................................................64<br />

InSolution Caspase-3 <strong>Inhibitor</strong> II ..................................64<br />

Caspase-3 <strong>Inhibitor</strong> II, Biotin Conjugate ........................64<br />

Caspase-3 <strong>Inhibitor</strong> III .........................................................64<br />

Caspase-3 <strong>Inhibitor</strong> IV .........................................................64<br />

Caspase-3 <strong>Inhibitor</strong> V ..........................................................64<br />

Caspase-3 <strong>Inhibitor</strong> VII ........................................................65<br />

Caspase-3/7 <strong>Inhibitor</strong> I ........................................................65<br />

Caspase-3/7 <strong>Inhibitor</strong> II ......................................................65<br />

Caspase-4 <strong>Inhibitor</strong> I............................................................65<br />

Caspase-4 <strong>Inhibitor</strong> I, Cell-Permeable ............................65<br />

Caspase-5 <strong>Inhibitor</strong> I............................................................65<br />

Caspase-6 <strong>Inhibitor</strong> I............................................................65<br />

Caspase-6 <strong>Inhibitor</strong> II, Cell-Permeable ...........................65<br />

Caspase-8 <strong>Inhibitor</strong> I, Cell-Permeable .....................65, 66<br />

Caspase-8 <strong>Inhibitor</strong> II ...................................................65, 66<br />

InSolution Caspase-8 <strong>Inhibitor</strong> II ...........................65, 66<br />

Caspase-9 <strong>Inhibitor</strong> I............................................................65<br />

InSolution Caspase-9 <strong>Inhibitor</strong> I ....................................65<br />

Caspase-9 <strong>Inhibitor</strong> II, Cell-Permeable ...........................65<br />

Caspase-9 <strong>Inhibitor</strong> III .........................................................65<br />

Caspase- 3 <strong>Inhibitor</strong> I .........................................................65<br />

Caspase- 3 <strong>Inhibitor</strong> II ........................................................65<br />

Castanospermine, Castanospermum australe ............ 47<br />

Cathepsin B <strong>Inhibitor</strong> I ..................................................... 27<br />

Cathepsin B <strong>Inhibitor</strong> II .................................................... 27<br />

Cathepsin G <strong>Inhibitor</strong> I ..................................................... 27<br />

Cathepsin <strong>Inhibitor</strong> I ......................................................... 27<br />

Cathepsin <strong>Inhibitor</strong> II ........................................................ 27<br />

Cathepsin <strong>Inhibitor</strong> III ....................................................... 27<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Cathepsin K <strong>Inhibitor</strong> I...................................................... 27<br />

Cathepsin K <strong>Inhibitor</strong> II .................................................... 27<br />

Cathepsin K <strong>Inhibitor</strong> III ................................................... 27<br />

Cathepsin L <strong>Inhibitor</strong> I ...................................................... 27<br />

Cathepsin L <strong>Inhibitor</strong> II ..................................................... 27<br />

Cathepsin L <strong>Inhibitor</strong> III.................................................... 27<br />

Cathepsin L <strong>Inhibitor</strong> IV.................................................... 28<br />

Cathepsin L <strong>Inhibitor</strong> V ..................................................... 28<br />

Cathepsin L <strong>Inhibitor</strong> VI.................................................... 28<br />

Cathepsin S <strong>Inhibitor</strong> ........................................................ 28<br />

Cathepsin/Subtilisin <strong>Inhibitor</strong> ......................................... 28<br />

CDC25 Phosphatase <strong>Inhibitor</strong>, BN82002 ........................59<br />

CDC25 Phosphatase <strong>Inhibitor</strong>, NSC 663284 ..................59<br />

Cdc2-Like Kinase <strong>Inhibitor</strong>, TG003 ................................... 5<br />

Cdk <strong>Inhibitor</strong>, p35.................................................................. 5<br />

Cdk <strong>Inhibitor</strong> ........................................................................ 5<br />

Cdk <strong>Inhibitor</strong> III ................................................................... 5<br />

Cdk <strong>Inhibitor</strong>, CGP745 4A ................................................ 5<br />

Cdk /2 <strong>Inhibitor</strong> II, NU6 02 ............................................... 5<br />

Cdk /2 <strong>Inhibitor</strong> III ........................................................ 6, 9<br />

Cdk /5 <strong>Inhibitor</strong> ............................................................. 6, 20<br />

Cdk2 <strong>Inhibitor</strong> I ...................................................................... 6<br />

Cdk2 <strong>Inhibitor</strong> II..................................................................... 6<br />

Cdk2 <strong>Inhibitor</strong> III ................................................................... 6<br />

Cdk2 <strong>Inhibitor</strong> IV, NU6 40 ................................................. 6<br />

Cdk2/5 <strong>Inhibitor</strong> .................................................................... 6<br />

Cdk2/Cyclin <strong>Inhibitor</strong>y Peptide I ....................................... 6<br />

Cdk2/Cyclin <strong>Inhibitor</strong>y Peptide II ...................................... 6<br />

Cdk4 <strong>Inhibitor</strong> ........................................................................ 6<br />

Cdk4 <strong>Inhibitor</strong> II, NSC 625987 .......................................... 6<br />

Cell Sheet Migration <strong>Inhibitor</strong> ..........................................70<br />

Cell Sheet Migration <strong>Inhibitor</strong>, Negative Control ........70<br />

Cerulenin, Cephalosporium caerulens ......................88, 89<br />

cFMS Receptor Tyrosine Kinase <strong>Inhibitor</strong> .......................48<br />

CGP-37 57 ........................................................................... 5<br />

Chelerythrine Chloride .........................................................38<br />

Chk2 <strong>Inhibitor</strong> ........................................................................ 2<br />

Chk2 <strong>Inhibitor</strong> II .................................................................... 2<br />

Chloramphenicol ................................................................ 60<br />

Chlorhexidine, Dihydrochloride ...................................... 20<br />

Chlorpromazine, Hydrochloride ..................... 95, 0, 57<br />

Chymostatin ........................................................................ 28<br />

Chymotrypsin <strong>Inhibitor</strong> I, Potato ................................... 28<br />

Cilostamide .......................................................................... 57<br />

CL-387,785 .............................................................................48<br />

CL-82 98 .............................................................................. 20<br />

Clioquinol ................................................................................96<br />

c-Met <strong>Inhibitor</strong> (Met Kinase <strong>Inhibitor</strong>) ...........................53<br />

CoEnzyme A, Trilithium Salt ...............................................85<br />

Collagenase <strong>Inhibitor</strong> I ...................................................... 7<br />

Collagenase Substrate II ................................................... 7<br />

Collagenase Substrate III, Fluorogenic .......................... 7<br />

Compound 52 ......................................................................... 6<br />

Compound 56 .........................................................................48<br />

Conduritol B Epoxide ........................................................ 47<br />

COX- <strong>Inhibitor</strong>, FR 22047 ................................................86<br />

COX-2 <strong>Inhibitor</strong> I ...................................................................86<br />

COX-2 <strong>Inhibitor</strong> II..................................................................86<br />

cPLA2a <strong>Inhibitor</strong> ...................................................................94<br />

CrmA, Recombinant.......................................................65, 66<br />

Cucurbitacin I, Cucumis sativus L. ....................................49<br />

Curcumin, Curcuma longa L. ................................49, 86, 9<br />

2-Cyanoethylalsterpaullone ........................................ 5, 9<br />

4-Cyano-3-methylisoquinoline .........................................34<br />

Cyclin-Dependent Protein Kinase <strong>Inhibitor</strong> Set............ 7<br />

Cycloheximide ..................................................................... 60<br />

InSolution Cycloheximide ............................................. 60<br />

Cycloheximide, High Purity ............................................. 60<br />

Cyclooxygenase <strong>Inhibitor</strong> Set ............................................88<br />

Cyclopamine, V. californicum ......................................... 62<br />

Cyclopamine-KAAD ........................................................... 62<br />

Cyclopiazonic Acid, Penicillium cyclopium ................ 42<br />

Cyclosporin A, Tolypocladium inflatum ...........................59<br />

Cyclo(Arg-Gly-Asp-D-Phe-Val) .........................................70<br />

Cypermethrin ..........................................................................59<br />

Cystatin, Egg White ........................................................... 28<br />

D<br />

D609 Prodrug .........................................................................93<br />

D609, Potassium Salt ...........................................................93<br />

Daidzein ..............................................................................9, 49<br />

Index<br />

Damnacanthal ........................................................................49<br />

,5-Dansyl-Glu-Gly-Arg Chloromethyl Ketone,<br />

Dihydrochloride ............................................................ 28<br />

Daphnetin .........................................................................34, 49<br />

DARPP-32, Phospho-, Rat, Recombinant, E. coli ..........59<br />

DARPP-32, Rat, Recombinant, E. coli ..............................59<br />

Daunorubicin, Hydrochloride .............................................82<br />

Debromohymenialdisine, Stylotella aurantium ............ 2<br />

(-)-Deguelin, Mundulea sericea .................................5, 5<br />

Deltamethrin ..........................................................................59<br />

Denbufylline......................................................................... 57<br />

2-Deoxy-D-galactose........................................................ 47<br />

3´-Deoxy-2´,3´-didehydrothymidine ...............................80<br />

Deoxyfuconojirimycin, Hydrochloride .......................... 47<br />

Deoxygalactonojirimycin, Hydrochloride..................... 47<br />

-Deoxymannojirimycin, Hydrochloride ...................... 48<br />

5´-Deoxy-5´-methylthioadenosine ........................49, 44<br />

-Deoxynojirimycin, Hydrochloride .............................. 48<br />

Dephostatin ............................................................................59<br />

3,4-Dephostatin.....................................................................59<br />

3,4-Dephostatin, Ethyl- .......................................................59<br />

Dequalinium Chloride ..........................................................38<br />

Dexamethasone ................................................................... 0<br />

3,4-Dichloroisocoumarin ..........................................95, 28<br />

5,6-Dichloro- -b-D-ribofuranosylbenzimidazole .........9<br />

Diclofenac Sodium .........................................................86, 96<br />

Diclofenac, 4'-Hydroxy- ......................................................86<br />

Dicoumarol ..............................................................................22<br />

2',5'-Dideoxyadenosine .................................................... 39<br />

Diethyl Pyrocarbonate .........................................................77<br />

DL-a-Difluoromethylornithine, Hydrochloride .......... 04<br />

Diisopropylfluorophosphate .....................................98, 28<br />

7-DMAG ............................................................................. 49<br />

N G ,N G -Dimethyl-L-arginine, Dihydrochloride .............. 0<br />

N G ,N G´ -Dimethyl-L-arginine, Dihydrochloride ............. 0<br />

Eg5 <strong>Inhibitor</strong> III, Dimethylenastron ............................... 42<br />

,4-Dimethylendothall ........................................................60<br />

Dipeptidylpeptidase II <strong>Inhibitor</strong> ..................................... 28<br />

Dipeptidylpeptidase IV <strong>Inhibitor</strong> I .................................. 28<br />

Dipeptidylpeptidase IV <strong>Inhibitor</strong> II ................................ 28<br />

Diphenyleneiodonium Chloride ....................................... 0<br />

Dipyridamole ....................................................................... 57<br />

7-DMAG ............................................................................. 49<br />

DMBI .........................................................................................49<br />

DNA Base Excision Repair Pathway <strong>Inhibitor</strong> ...............77<br />

DNA Methyltransferase <strong>Inhibitor</strong> .....................................7<br />

DNA-PK <strong>Inhibitor</strong> .................................................................. 8<br />

DNA-PK <strong>Inhibitor</strong> II............................................................... 8<br />

DNA-PK <strong>Inhibitor</strong> III ............................................................. 8<br />

DNA-PK <strong>Inhibitor</strong> IV ............................................................. 8<br />

DNA-PK <strong>Inhibitor</strong> V............................................................... 8<br />

DNase g <strong>Inhibitor</strong>, 6-DTAF...................................................77<br />

Doxorubicin, Hydrochloride ................................................83<br />

DPC ....................................................................................... 42<br />

DPQ ...........................................................................................79<br />

Drosophila Antennapedia Homeo-Domain (43-58) ....43<br />

DuP-697 ...................................................................................86<br />

E<br />

E-64 Protease <strong>Inhibitor</strong> .................................................... 28<br />

E-64, Immobilized .............................................................. 28<br />

EB-47 ........................................................................................79<br />

Ebselen .....................................................................................86<br />

Ecotin, E. coli ....................................................................... 29<br />

EDTA, Disodium Salt, Dihydrate, Molecular<br />

Biology Grade ................................................................ 29<br />

EDTA, Tetrasodium Salt ..................................................... 29<br />

Eg5 <strong>Inhibitor</strong> II .................................................................... 42<br />

Eg5 <strong>Inhibitor</strong> III, Dimethylenastron ............................... 42<br />

EGFR/ErbB-2 <strong>Inhibitor</strong> .........................................................49<br />

EGTA ....................................................................................... 29<br />

EGTA, Molecular Biology Grade ..................................... 29<br />

EHNA, Hydrochloride......................................................... 57<br />

Eicosapentaenoic Acid .........................................................92<br />

eIF-2a <strong>Inhibitor</strong>, Salubrinal................................................60<br />

Elastase <strong>Inhibitor</strong> I .................................................... 8, 29<br />

Elastase <strong>Inhibitor</strong> II ................................................... 8, 29<br />

Elastase <strong>Inhibitor</strong> III ................................................. 8, 29<br />

Elastase <strong>Inhibitor</strong> IV ........................................................... 8<br />

Elastatinal ............................................................................ 29<br />

Ellagic Acid, Dihydrate ......................................9, 34, 38, 83<br />

Technical Support<br />

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67


Index<br />

Ellipticine .................................................................................83<br />

Ellipticine, 9-Hydroxy-, Hydrochloride ...........................80<br />

Emetine, Dihydrochloride ................................................. 60<br />

Emodin .....................................................................................49<br />

Endothall .................................................................................60<br />

(–)-Epigallocatechin Gallate .......................................7 , 80<br />

Epirubicin Hydrochloride.....................................................83<br />

Epoxomicin, Synthetic ...................................................... 37<br />

InSolution Epoxomicin, Synthetic .............................. 39<br />

Erbstatin Analog ....................................................................49<br />

ERK Activation <strong>Inhibitor</strong> Peptide I, Cell-Permeable.....25<br />

ERK Activation <strong>Inhibitor</strong> Peptide II, Cell-Permeable ...25<br />

ERK <strong>Inhibitor</strong> ..........................................................................25<br />

Erythromycin, Streptomyces erythreus ........................ 60<br />

EST ................................................................................. 6, 29<br />

ET- 8-OCH 3 ......................................................................3 , 93<br />

Etazolate, Hydrochloride .................................................. 57<br />

N-Ethylmaleimide .............................................................. 42<br />

2-Ethyl-2-thiopseudourea, Hydrobromide .................. 0<br />

Etoposide .................................................................................83<br />

Etoposide Phosphate ............................................................83<br />

ETYA ...................................................................................86, 92<br />

Evodiamine, Evodia rutaecarpa ...................................... 54<br />

F<br />

F 6 .......................................................................................... 5<br />

FAAH <strong>Inhibitor</strong> I .....................................................................88<br />

FAAH <strong>Inhibitor</strong> II....................................................................88<br />

Fas/FasL Antagonist, Kp7-6................................................67<br />

Fascaplysin, Synthetic .......................................................... 6<br />

Fatty Acid Synthase <strong>Inhibitor</strong>, C75...................................88<br />

Fenvalerate..............................................................................60<br />

Flurbiprofen .....................................................................86, 96<br />

Fluvastatin, Sodium Salt .....................................................89<br />

FMS c Receptor Tyrosine Kinase <strong>Inhibitor</strong> (cFMS<br />

Receptor Tyrosine Kinase <strong>Inhibitor</strong>) ...........................48<br />

Folimycin, Streptomyces sp. ........................................... 42<br />

Fostriecin, Sodium Salt,<br />

Streptomyces pulveraceous .........................................60<br />

FPT <strong>Inhibitor</strong> I ...................................................................... 44<br />

FPT <strong>Inhibitor</strong> II ..................................................................... 45<br />

FPT <strong>Inhibitor</strong> III ................................................................... 45<br />

FR- ..........................................................................................70<br />

FTase <strong>Inhibitor</strong> I .................................................................. 45<br />

FTase <strong>Inhibitor</strong> II ................................................................. 45<br />

FTase <strong>Inhibitor</strong> III................................................................ 45<br />

FTI-276 .................................................................................. 45<br />

FTI-277 .................................................................................. 45<br />

FTI-2 48 ................................................................................ 45<br />

FTI-2628 ............................................................................... 45<br />

Fumonisin B , Fusarium moniliforme ...............................95<br />

Furin <strong>Inhibitor</strong> I .................................................................... 8<br />

Furin <strong>Inhibitor</strong> II .................................................................. 8<br />

FUT- 75 ................................................................................ 29<br />

G<br />

G 4 8 Sulfate, Cell Culture Tested ................................ 60<br />

G 4 8 Sulfate, Sterile-Filtered Aqueous Solution,<br />

Cell Culture Tested ...................................................... 6<br />

Galanthamine, Hydrobromide ...........................................98<br />

InnoZyme Gelatinase Activity Assay Kit,<br />

Fluorogenic .................................................................... 22<br />

Geldanamycin, Streptomyces hygroscopicus ......49, 49<br />

Genistein ................................................................... 49, 83, 96<br />

Genistin ....................................................................................49<br />

Gentamycin Sulfate ..............................................................95<br />

GGACK ................................................................................... 29<br />

GGTI-286 .............................................................................. 45<br />

GGTI-287 .............................................................................. 46<br />

GGTI-297 .............................................................................. 46<br />

GGTI-298 .............................................................................. 46<br />

GGTI-2 33 ............................................................................ 46<br />

GGTI-2 47 ............................................................................ 46<br />

Gliotoxin, Gladiocladiumfimbriatum ................... 46, 54<br />

H-Gly-Arg-Ala-Asp-Ser-Pro-OH ......................................70<br />

H-Gly-Arg-Gly-Asp-Ser-OH ...............................................70<br />

H-Gly-Arg-Gly-Asp-Ser-Pro-OH ......................................70<br />

H-Gly-Arg-Gly-Asp-Thr-Pro-OH .......................................70<br />

b-Glycerophosphate, Disodium Salt, Pentahydrate ....60<br />

GM 489 ............................................................................... 20<br />

GM 600 ............................................................................... 20<br />

InSolution GM600 ........................................................ 20<br />

GM 600 , Negative Control ............................................ 20<br />

GNF-2 (Bcr-abl <strong>Inhibitor</strong>) ...................................................48<br />

Gö 6976 ...................................................................................38<br />

InSolution Gö 6976 ...........................................................38<br />

Gö 6983 ...................................................................................38<br />

Gö 7874, Hydrochloride ...............................................29, 38<br />

Granzyme B <strong>Inhibitor</strong> I .................................................65, 66<br />

Granzyme B <strong>Inhibitor</strong> II ................................................65, 66<br />

Granzyme B <strong>Inhibitor</strong> IV ...............................................65, 66<br />

Group III Caspase <strong>Inhibitor</strong> I ..............................................65<br />

GSK-3b <strong>Inhibitor</strong> I ................................................................20<br />

GSK-3b <strong>Inhibitor</strong> II ...............................................................20<br />

GSK-3b <strong>Inhibitor</strong> III ..............................................................20<br />

GSK-3b <strong>Inhibitor</strong> VI ..............................................................20<br />

GSK-3b <strong>Inhibitor</strong> VII .............................................................20<br />

GSK-3b <strong>Inhibitor</strong> VIII ...........................................................20<br />

InSolution GSK-3b <strong>Inhibitor</strong> VIII ............................20, 84<br />

GSK-3b <strong>Inhibitor</strong> XI ..............................................................20<br />

GSK-3b <strong>Inhibitor</strong> XII, TWS 9 ...........................................20<br />

GSK-3b Peptide <strong>Inhibitor</strong> ....................................................2<br />

GSK-3b Peptide <strong>Inhibitor</strong>, Cell-permeable.....................2<br />

GSK-3 <strong>Inhibitor</strong> IX.......................................................... 6, 20<br />

InSolution GSK-3 <strong>Inhibitor</strong> IX .................................. 6, 20<br />

GSK-3 <strong>Inhibitor</strong> X ..................................................................20<br />

GSK-3 <strong>Inhibitor</strong> XIII ..............................................................20<br />

GSK-3 <strong>Inhibitor</strong> XIV, Control, MeBIO ..............................20<br />

GTP- 4564 ..............................................................................49<br />

2-Guanidinoethylmercaptosuccinic Acid .................... 29<br />

Guanosine 3´,5´-cyclic Monophosphorothioate,<br />

8-(4-Choloro-phenylthio)-, Rp-Isomer,<br />

Triethylammonium Salt .................................................43<br />

Guanosine 3´,5´-cyclic Monophosphorothioate,<br />

8-Bromo-, Rp-Isomer, Sodium Salt ...........................43<br />

Guanosine 3´,5´-cyclic Monophosphorothioate,<br />

b-Phenyl- , N2-etheno-8-bromo-, Rp-Isomer,<br />

Sodium Salt ......................................................................43<br />

Guanosine 3´,5´-cyclic Monophosphorothioate,<br />

Rp-Isomer, Triethylammonium Salt ...........................43<br />

H<br />

H-7, Dihydrochloride ............................................. 34, 38, 44<br />

Iso-H-7, Dihydrochloride ....................................................38<br />

H-8, Dihydrochloride ............................................................34<br />

H-9, Dihydrochloride .....................................................34, 44<br />

H-9, Immobilized...................................................................44<br />

H-89, Dihydrochloride ............................................... 7, 9, 34<br />

InSolution H-89, Dihydrochloride ............................9, 34<br />

HA 004, Dihydrochloride.......................................7, 34, 44<br />

HA 077, Dihydrochloride .................................... 34, 44, 56<br />

Haloperidol ............................................................................ 0<br />

HBDDE ......................................................................................38<br />

Hdm2 E3 Ligase <strong>Inhibitor</strong> ................................................ 37<br />

HDSF ...................................................................................... 29<br />

Heat Shock Protein <strong>Inhibitor</strong> I ........................................ 49<br />

Heat Shock Protein <strong>Inhibitor</strong> II ...................................... 49<br />

Helenalin, A. chamissonis ssp. foliosa ........................... 54<br />

Herbimycin A, Streptomyces sp. ........................................49<br />

Hexokinase II VDAC Binding Domain Peptide,<br />

Cell-Permeable ............................................................. 5<br />

Hinokitiol .................................................................................92<br />

Hispidin ....................................................................................38<br />

Histone Deacetylase Activity Assay Kit,<br />

Colorimetric ......................................................................75<br />

Histone Deacetylase Activity Assay Kit,<br />

Fluorometric .....................................................................75<br />

Histone Deacetylase HD2, Maize ......................................75<br />

Histone Deacetylase <strong>Inhibitor</strong> I .........................................73<br />

Histone Deacetylase <strong>Inhibitor</strong> II........................................74<br />

Histone Deacetylase <strong>Inhibitor</strong> III ......................................74<br />

N Histone Deacetylase, Human,<br />

Recombinant, S. frugiperda..........................................75<br />

Histone Deacetylase, Rat Liver ..........................................75<br />

HIV Protease <strong>Inhibitor</strong> ...................................................... 29<br />

HNMPA-(AM) 3 ........................................................................49<br />

Hsp25 Kinase <strong>Inhibitor</strong> ..............................................25, 49<br />

Hsp27 ELISA Kit .................................................................. 49<br />

HSV Replication <strong>Inhibitor</strong>, BP5 ..........................................72<br />

Humanin, Human, Synthetic ..............................................67<br />

(–)-Huperzine A, Huperzia serrata ...................................98<br />

(±)-Huperzine A .....................................................................98<br />

N G -Hydroxy-L-arginine, Monoacetate Salt ................ 04<br />

N w -Hydroxy-nor-L-arginine, Diacetate Salt ............... 04<br />

a-Hydroxyfarnesylphosphonic Acid ............................. 46<br />

Hydroxyfasudil .......................................................................56<br />

4-Hydroxynonenal ............................................................. 42<br />

Hygromycin B, Streptomyces sp. .................................... 6<br />

Hymenialdisine, Stylissa damicornis .................. 6, 2 , 26<br />

Hypericin........................................................................... 0, 38<br />

Hypocrellin B, Hypocrella bambusae ........................... 43<br />

Hypoestoxide, Hypoestes rosea ...................................... 54<br />

I<br />

IkB Kinase Inactive Control Peptide,<br />

Cell-Permeable ............................................................. 54<br />

IkB Kinase <strong>Inhibitor</strong> Peptide, Cell-Permeable ............ 54<br />

(±)-Ibuprofen ..........................................................................87<br />

IC26 ........................................................................................ 0<br />

ICG .............................................................................................2<br />

IGF- R <strong>Inhibitor</strong>, PPP ...........................................................49<br />

IKK <strong>Inhibitor</strong> II, Wedelolactone ...................................... 54<br />

IKK <strong>Inhibitor</strong> III, BMS-34554 ........................................ 55<br />

IKK-2 <strong>Inhibitor</strong> IV ............................................................... 55<br />

IKK-2 <strong>Inhibitor</strong> V ................................................................ 55<br />

IKK-2 <strong>Inhibitor</strong> VI ............................................................... 55<br />

IKK-2 <strong>Inhibitor</strong>, SC-5 4 .................................................... 55<br />

InSolution IKK-2 <strong>Inhibitor</strong>, SC-5 4 ............................ 55<br />

L-N 5 -( -Iminoethyl)ornithine, Dihydrochloride .......... 0<br />

Indirubin Derivative E804 ................................................... 7<br />

Indirubin-3´-monoxime ............................................... 7, 2<br />

Indirubin-3´-monoxime, 5-Iodo- .............................. 7, 2<br />

Indirubin-3´-monoxime-5-sulphonic Acid ............. 7, 2<br />

Indomethacin .........................................................................87<br />

Indomethacin Amide, N-Octyl- .........................................87<br />

Indomethacin Ester, 4-Methoxyphenyl- .........................87<br />

Indomethacin Ester, n-Heptyl- ..........................................87<br />

InnoZyme Gelatinase Activity Assay Kit,<br />

Fluorogenic .................................................................... 22<br />

InnoZyme TACE Activity Kit ......................................... 03<br />

InSolution AG 478 ...........................................................48<br />

InSolution Akt <strong>Inhibitor</strong> IV ................................................4<br />

InSolution Akt <strong>Inhibitor</strong> VIII, Isozyme-Selective,<br />

Akti- /2 ...............................................................................4<br />

InSolution ALLN ...................................................... 5, 25<br />

InSolution AMPK <strong>Inhibitor</strong>, Compound C ...............5, 84<br />

InSolution AZT, Triphosphate,Tetralithium Salt .........80<br />

InSolution BAY -7082 ................................................ 54<br />

InSolution Bisindolylmaleimide I ...................................37<br />

InSolution Blebbistatin, Racemic ................................ 42<br />

InSolution Casein Kinase II <strong>Inhibitor</strong>, DMAT..........9, 84<br />

InSolution Casein Kinase II <strong>Inhibitor</strong> I ...........................9<br />

InSolution Casein Kinase I <strong>Inhibitor</strong>, D4476..........9, 84<br />

InSolution Caspase-3 <strong>Inhibitor</strong> I, Cell-Permeable ....64<br />

InSolution Caspase-3 <strong>Inhibitor</strong> II ..................................64<br />

InSolution Caspase-8 <strong>Inhibitor</strong> II ...........................65, 66<br />

InSolution Caspase-9 <strong>Inhibitor</strong> I ....................................65<br />

InSolution Caspase <strong>Inhibitor</strong> I ........................................64<br />

InSolution Caspase <strong>Inhibitor</strong> VI......................................64<br />

InSolution Cycloheximide ............................................. 60<br />

InSolution Epoxomicin, Synthetic .............................. 37<br />

InSolution GM600 ........................................................ 20<br />

InSolution Gö 6976 ...........................................................38<br />

InSolution GSK-3 <strong>Inhibitor</strong> IX .................................. 6, 20<br />

InSolution GSK-3b <strong>Inhibitor</strong> VIII ............................20, 84<br />

InSolution H-89, Dihydrochloride ............................9, 34<br />

InSolution IKK-2 <strong>Inhibitor</strong>, SC-5 4 ............................ 55<br />

InSolution JAK <strong>Inhibitor</strong> I .........................................50, 84<br />

InSolution JNK <strong>Inhibitor</strong> II ...............................................22<br />

InSolution K-252a,<br />

Nocardiopsis sp. ................................... 7, 29, 34, 38, 44<br />

InSolution KN-93 .................................................................7<br />

InSolution KT5720 .............................................................34<br />

InSolution Leptomycin A, Streptomyces sp. ...............76<br />

InSolution Leptomycin B, Streptomyces sp. ...............76<br />

InSolution LY 294002 .......................................................3<br />

InSolution MANT-GppNHp ........................................... 40<br />

InSolution MANT-GTPgS ............................................... 40<br />

InSolution MG- 32 ........................................................ 37<br />

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InSolution Microcystin-LR,<br />

Microcystis aeruginosa.................................................60<br />

InSolution ML 3 63 ...........................................................26<br />

InSolution NF-kB Activation <strong>Inhibitor</strong>...................... 55<br />

InSolution Okadaic Acid,<br />

Prorocentrum concavum ...............................................60<br />

InSolution Olomoucine ..................................................... 7<br />

InSolution OM99-2 ......................................................... 0<br />

InSolution p38 MAP Kinase <strong>Inhibitor</strong> III ...............26, 84<br />

InSolution PD 53035 ......................................................5<br />

InSolution PD 58780 ......................................................84<br />

InSolution PP2 ....................................................................5<br />

InSolution Proteasome <strong>Inhibitor</strong> I .............................. 38<br />

InSolution Q-VD-OPh, Non-O-methylated .................65<br />

InSolution Raf Kinase <strong>Inhibitor</strong> I .................................55<br />

InSolution Rapamycin .......................................................84<br />

InSolution Ratjadone A, Synthetic ................................77<br />

InSolution Rho Kinase <strong>Inhibitor</strong> ..............................56, 84<br />

InSolution Ro-3 -8220 ....................................................40<br />

InSolution Roscovitine ...................................................... 7<br />

InSolution SB 202 90 .......................................................26<br />

InSolution SB 203580 .......................................................27<br />

InSolution g-Secretase <strong>Inhibitor</strong> IX ............................. 02<br />

InSolution g-Secretase <strong>Inhibitor</strong> X .............................. 02<br />

InSolution g-Secretase <strong>Inhibitor</strong> XIX ......................... 03<br />

InSolution g-Secretase <strong>Inhibitor</strong> XVII ......................... 02<br />

InSolution Sinefungin .......................................................7<br />

InSolution Sirtinol ..............................................................74<br />

InSolution Staurosporine, Streptomyces sp................35<br />

InSolution SU6656.............................................................52<br />

InSolution TAPI- ............................................................. 7<br />

InSolution Tautomycetin, S. griseochromogenes ......62<br />

InSolution Trichostatin A, Streptomyces sp................74<br />

InSolution VEGF Receptor 2 Kinase <strong>Inhibitor</strong> III......53, 84<br />

InSolution Y-27632 ...........................................................57<br />

a-Iodoacetamide ............................................................... 29<br />

5-Iodo-6-amino- ,2-benzopyrone ..................................79<br />

5-Iodotubercidin ...................................................................26<br />

I-OMe-AG 538 .......................................................................47<br />

IP3K <strong>Inhibitor</strong> .........................................................................23<br />

3-Isobutyl- -methylxanthine ......................................... 58<br />

Isogranulatimide ................................................................... 2<br />

Isohelenin, Inula sp. .......................................................... 55<br />

,5-Isoquinolinediol .............................................................79<br />

Isotetrandrine .........................................................................93<br />

ITSA .........................................................................................74<br />

J<br />

JAK <strong>Inhibitor</strong> I ........................................................................50<br />

InSolution JAK <strong>Inhibitor</strong> I .........................................50, 84<br />

JAK2 <strong>Inhibitor</strong> II .....................................................................50<br />

JAK3 <strong>Inhibitor</strong> I ......................................................................50<br />

JAK3 <strong>Inhibitor</strong> II .....................................................................50<br />

JAK3 <strong>Inhibitor</strong> III ...................................................................50<br />

JAK3 <strong>Inhibitor</strong> IV ...................................................................50<br />

JAK3 <strong>Inhibitor</strong> V .....................................................................50<br />

JAK3 <strong>Inhibitor</strong> VI ...................................................................50<br />

JAK3 <strong>Inhibitor</strong>, Negative Control ......................................50<br />

Jervine ................................................................................... 62<br />

JNK <strong>Inhibitor</strong> I, (L)-Form, Cell-Permeable ......................22<br />

JNK <strong>Inhibitor</strong> I, (L)-Form, Cell-Permeable,<br />

Negative Control .............................................................22<br />

JNK <strong>Inhibitor</strong> II .......................................................................22<br />

InSolution JNK <strong>Inhibitor</strong> II ...............................................22<br />

JNK <strong>Inhibitor</strong> II, Negative Control ....................................22<br />

JNK <strong>Inhibitor</strong> III, Cell-Permeable ......................................22<br />

JNK <strong>Inhibitor</strong> III, Cell-Permeable, Negative Control ....23<br />

JNK <strong>Inhibitor</strong> V .......................................................................23<br />

K<br />

K-252a, Nocardiopsis sp. ......................... 7, 29, 34, 38, 44<br />

InSolution K-252a,<br />

Nocardiopsis sp. ................................... 7, 29, 34, 38, 44<br />

K-252b, Nocardiopsis sp. .............................. 29, 34, 38, 44<br />

K-252c ......................................................................................38<br />

Kaempferol ..............................................................................87<br />

Kanamycin Sulfate, Streptomyces kanamyceticus ... 6<br />

Kanamycin Sulfate, Streptomyces kanamyceticus,<br />

Cell Culture-Tested ...................................................... 6<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Kenpaullone ..................................................................... 7, 2<br />

Ketoconazole ..........................................................................92<br />

(Z-LL) 2 Ketone...................................................................... 29<br />

Kifunensine, Kitasatosporia kifunense ......................... 48<br />

Kininogen, High Molecular Weight,<br />

Single Chain, Human Plasma ................................... 30<br />

Kininogen, High Molecular Weight,<br />

Two Chain, Human Plasma........................................ 30<br />

Kininogen, Low Molecular Weight,<br />

Human Plasma .............................................................. 30<br />

KN-62 .........................................................................................7<br />

KN-92 .........................................................................................7<br />

KN-93 .........................................................................................7<br />

InSolution KN-93 .................................................................7<br />

KN-93, Water-Soluble ...........................................................7<br />

KT5720 .....................................................................................34<br />

InSolution KT5720 .............................................................34<br />

KT5823 .....................................................................................44<br />

L<br />

L-744,832 ............................................................................. 46<br />

Lactacystin, Synthetic ....................................................... 37<br />

clasto-Lactacystin-b-lactone ........................................ 37<br />

Lavendustin A .........................................................................50<br />

Lavendustin B .........................................................................50<br />

Lavendustin C ....................................................................8, 50<br />

Lck <strong>Inhibitor</strong> ............................................................................50<br />

InSolution Leptomycin A, Streptomyces sp. ...............78<br />

InSolution Leptomycin B, Streptomyces sp. ...............78<br />

Leuhistin ............................................................................... 30<br />

Leupeptin, Hemisulfate .................................................... 30<br />

LFM-A ...................................................................................50<br />

LFM-A 2 ..................................................................................50<br />

LFM-A 3 ..................................................................................50<br />

Lipase <strong>Inhibitor</strong>, THL .............................................................90<br />

Lipase <strong>Inhibitor</strong>, URB602, Monoacylglycerol<br />

(Monoacylglycerol Lipase <strong>Inhibitor</strong>, URB602) .........90<br />

Lovastatin ................................................................................89<br />

Lovastatin, Sodium Salt.......................................................89<br />

Luteolin ................................................................................. 05<br />

LY 83583 ............................................................................... 06<br />

LY 294002 ...............................................................................3<br />

InSolution LY 294002 .......................................................3<br />

LY 3035 ................................................................................3<br />

M<br />

a 2 -Macroglobulin, Human Plasma................................ 30<br />

Mannostatin A, Hydrochloride ....................................... 48<br />

InSolution MANT-GppNHp ........................................... 40<br />

InSolution MANT-GTPgS ............................................... 40<br />

Manumycin A, Streptomyces parvulus ..................95, 46<br />

MAP Kinase Cascade <strong>Inhibitor</strong> Set ...................................28<br />

MAP Kinase <strong>Inhibitor</strong> Set I .................................................28<br />

MAP Kinase <strong>Inhibitor</strong> Set II ................................................28<br />

Mastoparan .......................................................................... 43<br />

MDL- 2,330A, Hydrochloride ......................................... 40<br />

MEG, Hydrochloride............................................................ 0<br />

MEK <strong>Inhibitor</strong> I .......................................................................26<br />

MEK <strong>Inhibitor</strong> II .....................................................................26<br />

MEK <strong>Inhibitor</strong> Set ..................................................................28<br />

MEK /2 <strong>Inhibitor</strong> ...................................................................26<br />

Melatonin .............................................................................. 0<br />

Melittin ..........................................................................38, 40<br />

Meloxicam ...............................................................................87<br />

Merbarone ...............................................................................83<br />

DL-2-Mercaptomethyl-3-<br />

guanidinoethylthiopropanoic Acid ......................... 30<br />

Met Kinase <strong>Inhibitor</strong> ............................................................50<br />

8-Methoxymethyl-3-isobutyl- -methylxanthine .... 58<br />

Methyl Arachidonyl Fluorophosphonate ........................93<br />

Methylene Blue ................................................................... 06<br />

4-{[3´,4´-(Methylenedioxy)benzyl]amino}<br />

-6-methoxyquinazoline ............................................. 58<br />

S-Methylisothiourea, Sulfate .......................................... 0<br />

S-Methyl-L-thiocitrulline, Dihydrochloride ................. 0<br />

a-Methylomuralide ........................................................... 37<br />

Mevastatin ..............................................................................89<br />

Mevastatin, Sodium Salt .....................................................89<br />

MG- 5 ................................................................................ 37<br />

Index<br />

MG- 32 ....................................................................... 0 , 37<br />

InSolution MG- 32 ........................................................ 39<br />

Microcystin-LF, Microcystis aeruginosa .........................60<br />

Microcystin-LR, Microcystis aeruginosa .........................60<br />

InSolution Microcystin-LR,<br />

Microcystis aeruginosa.................................................60<br />

Microcystin-LW, Microcystis aeruginosa ........................60<br />

Microcystin-RR, Microcystis aeruginosa ........................60<br />

MIF Antagonist, ISO- ...................................................... 63<br />

Milrinone .............................................................................. 58<br />

Mitochondrial Permeability Transition<br />

Pore Reagents Set ........................................................ 52<br />

MJ33 .........................................................................................94<br />

MK-886 ....................................................................................92<br />

MK2a <strong>Inhibitor</strong> .......................................................................26<br />

InSolution ML 3 63 ...........................................................26<br />

ML-7, Hydrochloride ............................................................29<br />

ML-9, Hydrochloride ............................................................29<br />

MMP <strong>Inhibitor</strong> I .................................................................. 20<br />

MMP <strong>Inhibitor</strong> II ................................................................. 20<br />

MMP <strong>Inhibitor</strong> III ................................................................ 20<br />

MMP <strong>Inhibitor</strong> IV ................................................................ 20<br />

MMP- ELISA Kit .............................................................. 22<br />

MMP-2 ELISA Kit .............................................................. 22<br />

MMP-2 <strong>Inhibitor</strong> I .............................................................. 20<br />

MMP-2 <strong>Inhibitor</strong> II ............................................................ 20<br />

MMP-2/MMP-3 <strong>Inhibitor</strong> I .............................................. 2<br />

MMP-2/MMP-3 <strong>Inhibitor</strong> II ............................................ 2<br />

MMP-2/MMP-9 <strong>Inhibitor</strong> I .............................................. 2<br />

MMP-2/MMP-9 <strong>Inhibitor</strong> II ............................................ 2<br />

MMP-2/MMP-9 <strong>Inhibitor</strong> III ........................................... 2<br />

MMP-2/MMP-9 <strong>Inhibitor</strong> IV ........................................... 2<br />

MMP-2/MMP-9 <strong>Inhibitor</strong> V ............................................ 2<br />

MMP-3 ELISA Kit ............................................................... 22<br />

MMP-3 <strong>Inhibitor</strong> I .............................................................. 2<br />

MMP-3 <strong>Inhibitor</strong> II ............................................................ 2<br />

MMP-3 <strong>Inhibitor</strong> III ........................................................... 2<br />

MMP-3 <strong>Inhibitor</strong> IV ........................................................... 2<br />

MMP-3 <strong>Inhibitor</strong> V ............................................................ 2<br />

MMP-3 <strong>Inhibitor</strong> VI ........................................................... 2<br />

MMP-3 <strong>Inhibitor</strong> VII .......................................................... 2<br />

MMP-3 <strong>Inhibitor</strong> VIII ......................................................... 2<br />

MMP-8 <strong>Inhibitor</strong> I .............................................................. 2<br />

MMP-8 <strong>Inhibitor</strong> I, Negative Control ........................... 2<br />

MMP-9 ELISA Kit .............................................................. 22<br />

MMP-9 <strong>Inhibitor</strong> I .............................................................. 22<br />

MMP-9/MMP- 3 <strong>Inhibitor</strong> I ........................................... 22<br />

MMP-9/MMP- 3 <strong>Inhibitor</strong> II .......................................... 22<br />

Active MMP- 3 ELISA Kit ................................................ 22<br />

MMP- 3 <strong>Inhibitor</strong> .............................................................. 22<br />

Monoacylglycerol Lipase <strong>Inhibitor</strong>, URB602 ..................90<br />

N G -Monoethyl-L-arginine, Monoacetate Salt ............ 0<br />

N G -Monomethyl-D-arginine, Monoacetate Salt ........ 0<br />

N G -Monomethyl-L-arginine, Monoacetate Salt .........<br />

mpV(pic) ...................................................................................60<br />

MY-5445 ............................................................................... 58<br />

Mycalolide B, Mycale sp. ................................................. 43<br />

Myosin Light Chain Kinase <strong>Inhibitor</strong> Peptide 8 ..........29<br />

N<br />

Naltrindole, Hydrochloride ...................................................5<br />

a-Naphthyl Acid Phosphate, Monosodium Salt ..........60<br />

NC- 300-B .......................................................................... 43<br />

NDGA, Larrea divaricata ......................................................92<br />

Necrosis <strong>Inhibitor</strong>, IM-54 ....................................................68<br />

Necrostatin- .........................................................................68<br />

Necrostatin- , Inactive Control ........................................68<br />

NEMO-Binding Domain Binding Peptide,<br />

Cell-Permeable ............................................................. 55<br />

NEMO-Binding Domain Binding Peptide,<br />

Cell-Permeable, Negative Control ........................... 55<br />

Neomycin Sulfate ..................................................................94<br />

Neomycin Sulfate, g-Irradiated,<br />

Tissue Culture Grade ......................................................94<br />

NFAT Activation <strong>Inhibitor</strong> III ..............................................60<br />

NF-kB Activation <strong>Inhibitor</strong>.............................................. 55<br />

InSolution NF-kB Activation <strong>Inhibitor</strong>...................... 55<br />

NF-kB SN50, Cell-Permeable <strong>Inhibitor</strong> Peptide ........ 56<br />

NF-kB SN50M, Cell-Permeable Inactive<br />

Control Peptide ............................................................. 56<br />

Technical Support<br />

Phone 800 628 8470<br />

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69


Index<br />

NF-kB Activation <strong>Inhibitor</strong> II, JSH-23 ......................... 56<br />

NGIC-I ......................................................................................39<br />

Niflumic Acid ...................................................................87, 97<br />

L-NIL, Dihydrochloride .......................................................<br />

NIPP- , His•Tag ® , Bovine Thymus,<br />

Recombinant, E. coli .......................................................60<br />

Nitric Oxide Assay Kit, Colorimetric .............................. 2<br />

Nitric Oxide Assay Kit, Fluorometric .............................. 2<br />

Nitric Oxide Synthase Assay Kit ...................................... 2<br />

Nitric Oxide Synthase Assay Kit, Colorimetric ............ 2<br />

Nitric Oxide Synthase, Inducible, <strong>Inhibitor</strong> Set .......... 2<br />

p-Nitroblue Tetrazolium Chloride...................................<br />

7-Nitroindazole ...................................................................<br />

7-Nitroindazole, 3-Bromo-, Sodium Salt .....................<br />

7-Nitroindazole, Sodium Salt ..........................................<br />

N G -Nitro-L-arginine ...........................................................<br />

N G -Nitro-L-arginine Methyl Ester, Hydrochloride .....<br />

5-Nitro-2-(3-phenylpropyl-amino)benzoic Acid .........87<br />

NLVS ....................................................................................... 37<br />

nNOS <strong>Inhibitor</strong> I...................................................................<br />

NOS <strong>Inhibitor</strong> Set ................................................................ 2<br />

Novobiocin, Sodium Salt .....................................................72<br />

NP-LLL-VS ............................................................................ 37<br />

NPPB ..................................................................................23, 26<br />

NS-398 .....................................................................................87<br />

NS 2028 ................................................................................ 06<br />

N-SMase <strong>Inhibitor</strong>, GW4869 .............................................93<br />

NU 025 ....................................................................................79<br />

O<br />

ODQ ........................................................................................ 06<br />

Okadaic Acid, Ammonium Salt ..........................................60<br />

Okadaic Acid, Potassium Salt ............................................6<br />

Okadaic Acid, Prorocentrum concavum ..........................60<br />

InSolution Okadaic Acid,<br />

Prorocentrum concavum ...............................................60<br />

Okadaic Acid, Sodium Salt .................................................6<br />

Oligomycin .................................................................. 43, 5<br />

Olomoucine ............................................................................. 7<br />

InSolution Olomoucine ..................................................... 7<br />

Olomoucine II ......................................................................... 7<br />

Olomoucine, Iso- ................................................................... 7<br />

Olomoucine, N 9 -Isopropyl- ................................................. 7<br />

InSolution OM99-2 ......................................................... 0<br />

Omeprazole .......................................................................... 43<br />

Omi/HtrA2 Protease <strong>Inhibitor</strong>, Ucf- 0 ..........................67<br />

Oridonin, R. rubescens ...................................................... 56<br />

Ouabain, Octahydrate ....................................................... 43<br />

Oxamflatin ..............................................................................74<br />

Oxindole I ................................................................................5<br />

P<br />

p38 MAP Kinase <strong>Inhibitor</strong> ...................................................26<br />

p38 MAP Kinase <strong>Inhibitor</strong> III ..............................................26<br />

InSolution p38 MAP Kinase <strong>Inhibitor</strong> III ...............26, 84<br />

p-APMSF, Hydrochloride .................................................. 26<br />

PACOCF 3 ...................................................................................94<br />

PARP Cleavage Detection Kit .............................................79<br />

PARP <strong>Inhibitor</strong> Set ................................................................79<br />

Parthenolide, Tanacetum parthenium .......................... 56<br />

,3-PBITU, Dihydrobromide ..............................................<br />

PD 98059 .................................................................................26<br />

PD 45305 ............................................................................ 6<br />

PD 50606 ............................................................................ 6<br />

PD 5 746 ............................................................................. 6<br />

PD 53035 ..............................................................................5<br />

InSolution PD 53035 ......................................................5<br />

PD 56273 ..............................................................................5<br />

PD 58780 ..............................................................................5<br />

InSolution PD 58780 ......................................................84<br />

PD 68393 ..............................................................................5<br />

PD 693 6 ...............................................................................26<br />

PD 74265 ..............................................................................5<br />

PDGF Receptor Tyrosine Kinase <strong>Inhibitor</strong> I ....................5<br />

PDGF Receptor Tyrosine Kinase <strong>Inhibitor</strong> II ...................5<br />

PDGF Receptor Tyrosine Kinase <strong>Inhibitor</strong> III ..................5<br />

DL-threo-PDMP, Hydrochloride...................................... 48<br />

a -PDX, Human, Recombinant, E. coli ......................... 30<br />

Pentoxifylline ..........................................................................70<br />

Pepstatin A Methyl Ester .................................................. 0<br />

Pepstatin A, Synthetic....................................................... 30<br />

Pfmrk <strong>Inhibitor</strong>, WR 2 6 74 .............................................. 7<br />

Phenylarsine Oxide ...............................................................6<br />

Phenylmethylsulfonyl Fluoride ...................................... 30<br />

Phloretin ..................................................................................39<br />

PHM-L LIPOSORB Absorbent ..........................................90<br />

Phorbol- 2, 3-dibutyrate ............................................... 43<br />

Phosphatase <strong>Inhibitor</strong> Cocktail Set I ...............................62<br />

Phosphatase <strong>Inhibitor</strong> Cocktail Set II ..............................62<br />

Phosphatase <strong>Inhibitor</strong> Cocktail Set III .............................62<br />

Phosphatase <strong>Inhibitor</strong> Cocktail Set IV .............................62<br />

5-Phosphatase <strong>Inhibitor</strong> .....................................................6<br />

Phosphodiesterase 4 <strong>Inhibitor</strong> ........................................ 58<br />

Phosphodiesterase <strong>Inhibitor</strong> Set I .................................. 58<br />

Phosphodiesterase V <strong>Inhibitor</strong> II .................................... 58<br />

Phosphoramidon, Disodium Salt .................................... 30<br />

Phosphotyrosine Phosphatase <strong>Inhibitor</strong> Set<br />

(Vanadium) .......................................................................62<br />

PI 3-Kg <strong>Inhibitor</strong> ....................................................................3<br />

PI 3-Kg <strong>Inhibitor</strong> II ................................................................32<br />

Piceatannol ....................................................... 29, 34, 39, 5<br />

Pifithrin-a ...............................................................................67<br />

Pifithrin-a, Cyclic-................................................................67<br />

PIPER .........................................................................................80<br />

PJ34 ...........................................................................................79<br />

PKC b <strong>Inhibitor</strong> .........................................................................39<br />

PKC bII /EGFR <strong>Inhibitor</strong> ............................................................39<br />

PKC i , GST-Fusion Protein, Active, Human,<br />

Recombinant, S. frugiperda..........................................42<br />

PKC m , GST-Fusion Protein, Active, Human,<br />

Recombinant, S. frugiperda..........................................42<br />

PKC n , GST-Fusion Protein, Active, Human,<br />

Recombinant, S. frugiperda..........................................42<br />

Plasminogen Activator <strong>Inhibitor</strong>- , Human,<br />

Recombinant ................................................................. 59<br />

Plasminogen Activator <strong>Inhibitor</strong>- , Mutant,<br />

Human, Recombinant ................................................. 59<br />

Plasminogen Activator <strong>Inhibitor</strong>- , Mutant,<br />

Mouse, Recombinant .................................................. 59<br />

Plasminogen Activator <strong>Inhibitor</strong>- , Rat,<br />

Recombinant ................................................................. 59<br />

Polymyxin B Sulfate .............................................................39<br />

PP Analog ..............................................................................5<br />

PP Analog II, NM-PP ................................................8, 5<br />

PP2 ............................................................................................5<br />

InSolution PP2 ....................................................................5<br />

PP3 ............................................................................................5<br />

PPACK II, Trifluoroacetate Salt ....................................... 30<br />

PPACK, Dihydrochloride .................................................... 30<br />

PPACK Dihydrochloride, Biotinylated ........................... 30<br />

PPM- 8 ......................................................................... , 56<br />

Pravastatin, Sodium Salt .....................................................89<br />

Prolyl Endopeptidase <strong>Inhibitor</strong> II ................................... 3<br />

N G -Propyl-L-arginine .........................................................<br />

Protease Arrest Reagent ................................................ 34<br />

Protease <strong>Inhibitor</strong> Cocktail Set I .................................... 32<br />

Protease <strong>Inhibitor</strong> Cocktail Set I, Animal-Free .......... 35<br />

Protease <strong>Inhibitor</strong> Cocktail Set II ................................... 32<br />

Protease <strong>Inhibitor</strong> Cocktail Set III ................................. 32<br />

Protease <strong>Inhibitor</strong> Cocktail Set III, Animal-Free ........ 35<br />

Protease <strong>Inhibitor</strong> Cocktail Set IV ................................. 33<br />

Protease <strong>Inhibitor</strong> Cocktail Set V, Animal-Free ......... 35<br />

Protease <strong>Inhibitor</strong> Cocktail Set V, EDTA-Free ............. 33<br />

Protease <strong>Inhibitor</strong> Cocktail Set VI ................................. 33<br />

Protease <strong>Inhibitor</strong> Cocktail Set VII ................................ 34<br />

Protease <strong>Inhibitor</strong> Cocktail Set VIII ............................... 34<br />

Protease <strong>Inhibitor</strong> III, Anthrax Lethal Factor<br />

(Anthrax Lethal Factor Protease <strong>Inhibitor</strong> III) ....... 3<br />

Protease <strong>Inhibitor</strong> Set ....................................................... 34<br />

Proteasome <strong>Inhibitor</strong> I ..................................................... 37<br />

InSolution Proteasome <strong>Inhibitor</strong> I .............................. 38<br />

Proteasome <strong>Inhibitor</strong> II ..................................................... 38<br />

Proteasome <strong>Inhibitor</strong> III ................................................... 38<br />

Proteasome <strong>Inhibitor</strong> IV ................................................... 38<br />

Proteasome <strong>Inhibitor</strong> VII, Antiprotealide ..................... 38<br />

Proteasome <strong>Inhibitor</strong> Set I ............................................... 38<br />

Proteasome <strong>Inhibitor</strong> Set II ............................................. 38<br />

Protein Arginine N-Methyltransferase<br />

<strong>Inhibitor</strong>, AMI- ................................................... 46, 60<br />

Protein Kinase A <strong>Inhibitor</strong> 5-24 ........................................35<br />

Protein Kinase A <strong>Inhibitor</strong> 6-22 Amide...........................35<br />

Protein Kinase A <strong>Inhibitor</strong> 4-22 Amide,<br />

Cell-Permeable, Myristoylated ....................................35<br />

Protein Kinase C <strong>Inhibitor</strong> 20-28,<br />

Cell-Permeable, Myristoylated ....................................39<br />

Protein Kinase C <strong>Inhibitor</strong> Peptide 9-3 ......................39<br />

Protein Kinase C <strong>Inhibitor</strong> Peptide 9-36 ......................39<br />

Protein Kinase C <strong>Inhibitor</strong> Set ...........................................42<br />

Protein Kinase C <strong>Inhibitor</strong>, EGF-R Fragment<br />

65 -658, Myristoylated ................................................39<br />

Protein Kinase C , His•Tag®, Human,<br />

a<br />

Recombinant, S. frugiperda..........................................42<br />

Protein Kinase C , His•Tag®, Human,<br />

bII<br />

Recombinant ....................................................................42<br />

Protein Kinase C , His•Tag®, Human,<br />

d<br />

Recombinant, S. frugiperda..........................................42<br />

Protein Kinase C Translocation <strong>Inhibitor</strong> Peptide .......40<br />

e<br />

Protein Kinase C Translocation <strong>Inhibitor</strong> Peptide,<br />

e<br />

Negative Control .............................................................40<br />

Protein Kinase C Pseudosubstrate <strong>Inhibitor</strong> .................39<br />

z<br />

Protein Kinase C Pseudosubstrate <strong>Inhibitor</strong>,<br />

z<br />

Myristoylated ...................................................................39<br />

Protein Kinase C , His•Tag®, Human,<br />

x<br />

Recombinant, S. frugiperda..........................................42<br />

Protein Kinase C Pseudosubstrate <strong>Inhibitor</strong>,<br />

h<br />

Myristoylated ...................................................................39<br />

Protein Kinase C Pseudosubstrate <strong>Inhibitor</strong> .................39<br />

θ<br />

Protein Kinase C Pseudosubstrate <strong>Inhibitor</strong>,<br />

θ<br />

Myristoylated ...................................................................39<br />

Protein Kinase C , His•Tag®,<br />

θ<br />

Human, Recombinant, S. frugiperda .........................42<br />

Protein Kinase G Ia <strong>Inhibitor</strong>, Cell-Permeable ..............44<br />

Protein Kinase G <strong>Inhibitor</strong> ..................................................44<br />

Protein Kinase <strong>Inhibitor</strong>, DMAP .........................................23<br />

Protein Phosphatase 2A <strong>Inhibitor</strong> I PP2A ,<br />

Human Kidney, Recombinant, E. coli .........................6<br />

Protein Phosphatase 2A <strong>Inhibitor</strong> I 2<br />

70 Orders Phone 800 854 34 7<br />

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Fax 800 776 0999<br />

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PP2A ,<br />

Human, Recombinant, E. coli .......................................6<br />

Protein Phosphatase <strong>Inhibitor</strong> 2, Human,<br />

Recombinant, E. coli .......................................................6<br />

Protein Phosphatase <strong>Inhibitor</strong> 2, Rabbit Muscle,<br />

Recombinant, E. coli .......................................................6<br />

Protein Phosphatase <strong>Inhibitor</strong> Set II ................................62<br />

Protein Synthesis Initiation <strong>Inhibitor</strong>,<br />

NSC 9889 .......................................................... 60, 6<br />

Protein Tyrosine Phosphatase CD45 <strong>Inhibitor</strong>...............6<br />

Protein Tyrosine Phosphatase <strong>Inhibitor</strong> I ........................6<br />

Protein Tyrosine Phosphatase <strong>Inhibitor</strong> II ......................6<br />

Protein Tyrosine Phosphatase <strong>Inhibitor</strong> III .....................6<br />

Protein Tyrosine Phosphatase <strong>Inhibitor</strong> IV .....................6<br />

P-Selectin Antagonist ..........................................................70<br />

Pterostilbene, Pterocarpus marsupium ...........................87<br />

PTP B <strong>Inhibitor</strong> ......................................................................6<br />

Puromycin, Dihydrochloride ............................................ 6<br />

Puromycin, Dihydrochloride, Cell Culture-Tested ..... 6<br />

Purvalanol A ........................................................................... 7<br />

-Pyrrolidinecarbodithioic Acid, Ammonium Salt .....<br />

Q<br />

Quercetin, Dihydrate .....................................................32, 94<br />

Quinacrine, Dihydrochloride .......................................94, 98<br />

InSolution Q-VD-OPh, Non-O-methylated .................65<br />

R<br />

Radicicol, Diheterospora chlamydosporia ...............52, 87<br />

Raf Kinase <strong>Inhibitor</strong> I .........................................................55<br />

InSolution Raf Kinase <strong>Inhibitor</strong> I .................................55<br />

InSolution Rapamycin .......................................................84<br />

InSolution Ratjadone A, Synthetic ................................77<br />

Resveratrol .......................................................................87, 97<br />

RG- 3022 ................................................................................52<br />

Rho-Kinase <strong>Inhibitor</strong> ............................................................56<br />

InSolution Rho Kinase <strong>Inhibitor</strong> ..............................56, 84<br />

Rho-Kinase <strong>Inhibitor</strong> II ........................................................56<br />

Rho-Kinase <strong>Inhibitor</strong> III, Rockout .....................................56<br />

Rho Kinase <strong>Inhibitor</strong> IV ........................................................56<br />

Ribonuclease <strong>Inhibitor</strong>, Human,<br />

Recombinant, E. coli .......................................................77<br />

Ribonuclease <strong>Inhibitor</strong>, Human Placenta .......................77<br />

Rifampicin ...............................................................................72<br />

RK-682, Streptomyces sp. ...................................................6


RNA Polymerase III <strong>Inhibitor</strong> ..............................................72<br />

Ro 06-9920 ..................................................................92, 38<br />

Ro 06-9920, Control ........................................................ 38<br />

Ro-20- 724 ......................................................................... 58<br />

Ro-3 -7549 ............................................................................40<br />

Ro 3 -7549, Immobilized ...................................................40<br />

Ro-3 -8220 .....................................................................2 , 40<br />

InSolution Ro-3 -8220 ....................................................40<br />

Ro-3 -8425 ............................................................................40<br />

Ro-32-0432 ............................................................................40<br />

Rolipram ............................................................................... 58<br />

Roscovitine .............................................................................. 7<br />

InSolution Roscovitine ...................................................... 7<br />

Roscovitine, (S)-Isomer ....................................................... 7<br />

Rotenone .............................................................................. 5<br />

Rottlerin ...................................................................................40<br />

Ru360 .................................................................................... 52<br />

S<br />

Safingol ....................................................................................40<br />

Sangivamycin .........................................................................40<br />

SANT- .................................................................................. 63<br />

SB 202 90 ...............................................................................26<br />

InSolution SB 202 90 .......................................................26<br />

SB 202 90, Immobilized .....................................................26<br />

SB 202474 ...............................................................................27<br />

SB 202474, Dihydrochloride ..............................................27<br />

SB 203580 ...............................................................................27<br />

InSolution SB 203580 .......................................................27<br />

SB 203580, Iodo- ..................................................................27<br />

SB 203580, Sulfone ..............................................................27<br />

SB 2 8078 ............................................................................... 2<br />

SB 220025 ...............................................................................27<br />

SB 239063 ...............................................................................27<br />

SBHA .........................................................................................74<br />

SC-560 .....................................................................................87<br />

SC-68376 ................................................................................27<br />

Scriptaid ...................................................................................74<br />

Scytonemin, Lyngbya sp. .............................................. 2, 4<br />

b-Secretase <strong>Inhibitor</strong> II ..................................................... 0<br />

b-Secretase <strong>Inhibitor</strong> III .................................................... 0<br />

b-Secretase <strong>Inhibitor</strong> IV .................................................... 0<br />

g-Secretase <strong>Inhibitor</strong> I ....................................................... 0<br />

g-Secretase <strong>Inhibitor</strong> II ...................................................... 0<br />

g-Secretase <strong>Inhibitor</strong> III..................................................... 0<br />

g-Secretase <strong>Inhibitor</strong> IV..................................................... 0<br />

g-Secretase <strong>Inhibitor</strong> V ...................................................... 0<br />

g-Secretase <strong>Inhibitor</strong> VI..................................................... 0<br />

g-Secretase <strong>Inhibitor</strong> VII ................................................... 02<br />

g-Secretase <strong>Inhibitor</strong> IX..................................................... 02<br />

InSolution g-Secretase <strong>Inhibitor</strong> IX ............................. 02<br />

InSolution g-Secretase <strong>Inhibitor</strong> X .............................. 02<br />

g-Secretase <strong>Inhibitor</strong> XI..................................................... 02<br />

g-Secretase <strong>Inhibitor</strong> XII ................................................... 02<br />

g-Secretase <strong>Inhibitor</strong> XIII .................................................. 02<br />

g-Secretase <strong>Inhibitor</strong> XIV .................................................. 02<br />

g-Secretase <strong>Inhibitor</strong> XVI .................................................. 02<br />

InSolution g-Secretase <strong>Inhibitor</strong> XVII ......................... 02<br />

InSolution g-Secretase <strong>Inhibitor</strong> XIX ......................... 03<br />

g-Secretase <strong>Inhibitor</strong> XX .................................................. 03<br />

g-Secretase <strong>Inhibitor</strong> XXI ................................................. 03<br />

g 40 -Secretase <strong>Inhibitor</strong> I ................................................... 03<br />

g 40 -Secretase <strong>Inhibitor</strong> II .................................................. 03<br />

Serine Protease <strong>Inhibitor</strong> Cocktail Set I ....................... 34<br />

Serine/Threonine Kinase <strong>Inhibitor</strong> Set .............................42<br />

SFK ....................................................................................... 52<br />

Simvastatin .............................................................................89<br />

Simvastatin, Sodium Salt ....................................................89<br />

InSolution Sinefungin .......................................................7<br />

Sirtinol ......................................................................................74<br />

InSolution Sirtinol ..............................................................74<br />

SKF-525A, Hydrochloride..................................................<br />

SKF-86002 ............................................................... 27, 87, 92<br />

Sodium Orthovanadate........................................................6<br />

Sodium Salicylate..................................................................87<br />

Sodium Stibogluconate .......................................................62<br />

Spectinomycin, Dihydrochloride, Pentahydrate,<br />

Streptomyces sp. .......................................................... 6<br />

Spermine, Tetrahydrochloride ............................................94<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Sphingosine Kinase <strong>Inhibitor</strong> .............................................57<br />

D-erythro-Sphingosine, Dihydro- ..............................4 , 94<br />

D-erythro-Sphingosine, N,N-Dimethyl- ..................4 , 57<br />

D-erythro-Sphingosine, Free Base, Bovine Brain .........40<br />

D-erythro-Sphingosine, Free Base, High Purity ............40<br />

sPLA 2 -IIA <strong>Inhibitor</strong> I ..............................................................94<br />

Spleen Tyrosine Kinase <strong>Inhibitor</strong> (Syk <strong>Inhibitor</strong>) ..........52<br />

Spleen Tyrosine Kinase <strong>Inhibitor</strong> II (Syk <strong>Inhibitor</strong> II) ...52<br />

Splitomicin ..............................................................................74<br />

SQ 22536 .............................................................................. 40<br />

Src Family Protein Tyrosine Kinase <strong>Inhibitor</strong> Set .........54<br />

Src Kinase <strong>Inhibitor</strong> I ............................................................52<br />

Src Kinase <strong>Inhibitor</strong> II ..........................................................52<br />

ST638 .................................................................................52, 94<br />

Staurosporine, Streptomyces sp. ................. 29, 35, 4 , 44<br />

InSolution Staurosporine, Streptomyces sp................35<br />

Stem Cell Proliferation <strong>Inhibitor</strong> .................................... 63<br />

STO-609 ................................................................................ 5, 8<br />

Streptomycin Sulfate, Streptomyces sp. ...................... 6<br />

SU 498.....................................................................................52<br />

SU4984.....................................................................................52<br />

SU5402 .....................................................................................52<br />

SU56 4 .....................................................................................52<br />

SU6656.....................................................................................52<br />

InSolution SU6656.............................................................52<br />

SU95 6 ..................................................................................... 7<br />

SU 652 ...................................................................................52<br />

Sulfasalazine .............................................................. 05, 56<br />

Sulindac ...................................................................................88<br />

Sulindac Sulfide .....................................................................88<br />

Sulindac Sulfone ...................................................................88<br />

Suramin, Sodium Salt .........................................62, 83, 43<br />

Swainsonine, Swainsona canescens ............................. 48<br />

Syk <strong>Inhibitor</strong> ...........................................................................52<br />

Syk <strong>Inhibitor</strong> II........................................................................52<br />

T<br />

InnoZyme TACE Activity Kit ......................................... 03<br />

Tamoxifen Citrate..................................................................4<br />

Tamoxifen, 4-Hydroxy-, (Z)- ..............................................4<br />

TAPI-0 ..................................................................................... 7<br />

TAPI- ..................................................................................... 7<br />

InSolution TAPI- ............................................................. 7<br />

TAPI-2 .................................................................................... 4<br />

Tautomycin, Streptomyces spiroverticillatus .................62<br />

InSolution Tautomycetin, S. griseochromogenes ......62<br />

Telomerase <strong>Inhibitor</strong> III, Negative Control,<br />

Sodium Salt ......................................................................8<br />

Telomerase <strong>Inhibitor</strong> III, Sodium Salt ..............................8<br />

Telomerase <strong>Inhibitor</strong> VI, Sodium Salt ..............................8<br />

Telomerase <strong>Inhibitor</strong> IX........................................................8<br />

TER 4687 ................................................................................4<br />

(-)-Terreic Acid, Synthetic ..................................................53<br />

Tetracycline, Hydrochloride ............................................. 6<br />

Tetracycline, Hydrochloride, Cell Culture-Tested ...... 6<br />

Tetrahydrolipstatin (Lipase <strong>Inhibitor</strong>, THL) .....................90<br />

TGF-b RI Kinase <strong>Inhibitor</strong> ............................................53, 57<br />

TGF-b RI Kinase <strong>Inhibitor</strong> II .........................................53, 57<br />

Thapsigargin ........................................................................ 43<br />

2´-Thioadenosine ..................................................................53<br />

L-Thiocitrulline, Dihydrochloride ....................................<br />

DL-Thiorphan .............................................................. 22, 4<br />

Thiostrepton ......................................................................... 6<br />

TIMP- ELISA Kit ............................................................... 24<br />

TIMP- , Human Neutrophil Granulocyte .................... 23<br />

TIMP- , Recombinant, Bovine ........................................ 23<br />

TIMP- , Recombinant, Human ....................................... 23<br />

TIMP-2 ELISA Kit ................................................................ 24<br />

TIMP-2, Human Rheumatoid Synovial Fibroblast ..... 23<br />

TIMP-2, Human, Recombinant ....................................... 23<br />

TIMP-2, Mouse, Recombinant ........................................ 23<br />

TIMP-3, Human, Recombinant ....................................... 23<br />

TIMP-3, Mouse Recombinant ......................................... 24<br />

TIMP-4, Human Fibroblast .............................................. 24<br />

TIQ-A .........................................................................................79<br />

TIRAP <strong>Inhibitor</strong> Peptide, Cell-Permeable ..................... 56<br />

TIRAP <strong>Inhibitor</strong> Peptide, Control, Cell-Permeable ..... 56<br />

TLCK, Hydrochloride .......................................................... 3<br />

TMPyP4 ....................................................................................8<br />

Index<br />

Tobramycin, Free Base ...................................................... 6<br />

TOFA ..........................................................................................85<br />

Tomatidine, HCl .................................................................. 63<br />

Topotecan, Hydrochloride ...................................................83<br />

N a -Tosyl-Phe Chloromethyl Ketone .................................95<br />

TPCK ...................................................................................... 3<br />

Trequinsin, Hydrochloride ................................................ 58<br />

Trichostatin A, Streptomyces sp. .......................................74<br />

InSolution Trichostatin A, Streptomyces sp................76<br />

TRIM ........................................................................................<br />

Tripeptidylpeptidase II <strong>Inhibitor</strong> ..................................... 3<br />

TrkA <strong>Inhibitor</strong> ..........................................................................53<br />

Trypsin <strong>Inhibitor</strong>, Corn....................................................... 3<br />

Trypsin <strong>Inhibitor</strong>, Soybean ............................................... 3<br />

Trypsin <strong>Inhibitor</strong>, Soybean, High Activity .................... 3<br />

Tunicamycin, Streptomyces lysosuperficus ................. 48<br />

TX- 23 .............................................................................35, 53<br />

TX- 9 8 .....................................................................................8<br />

Tyrene CR4 ..............................................................................53<br />

Tyropeptin A, Synthetic .................................................... 38<br />

Tyrosine Kinase <strong>Inhibitor</strong> Set II .........................................54<br />

Tyrosine-Specific Protein Kinase <strong>Inhibitor</strong> .....................53<br />

U<br />

U0 24 .......................................................................................27<br />

U0 25 .......................................................................................27<br />

U0 26 .......................................................................................27<br />

U 8666A ............................................................................... 63<br />

U-73 22 ...................................................................................94<br />

U-73343 ..................................................................................94<br />

Ubiquitin Aldehyde ............................................................ 38<br />

UCH-L <strong>Inhibitor</strong> ................................................................ 38<br />

UCH-L3 <strong>Inhibitor</strong> ................................................................ 38<br />

V<br />

Valinomycin, Streptomyces fulvissimus ....................... 52<br />

D-Val-Phe-Lys Chloromethyl Ketone,<br />

Dihydrochloride ............................................................ 3<br />

Valproic Acid, Sodium Salt .................................................74<br />

VEGF Receptor 2 Kinase <strong>Inhibitor</strong> I ..................................53<br />

VEGF Receptor 2 Kinase <strong>Inhibitor</strong> II .................................53<br />

VEGF Receptor 2 Kinase <strong>Inhibitor</strong> III ...............................53<br />

InSolution VEGF Receptor 2 Kinase <strong>Inhibitor</strong> III......53, 84<br />

VEGF Receptor 2 Kinase <strong>Inhibitor</strong> IV ...............................54<br />

VEGF Receptor 2 Kinase <strong>Inhibitor</strong> V, ZM32388 ..........54<br />

VEGF Receptor 3 Kinase <strong>Inhibitor</strong>, MAZ5 .....................54<br />

VEGF Receptor Tyrosine Kinase <strong>Inhibitor</strong> .......................53<br />

VEGF Receptor Tyrosine Kinase <strong>Inhibitor</strong> II.............53, 54<br />

Vinpocetine .......................................................................... 58<br />

Vitamin E Succinate .............................................................4<br />

W<br />

W-5, Hydrochloride ....................................................30, 58<br />

W-7, Hydrochloride ....................................................30, 58<br />

W- 2, Hydrochloride ..................................................30, 58<br />

W- 3, Hydrochloride ..................................................30, 58<br />

WHI-P 80, Hydrochloride................................................... 7<br />

Wortmannin ............................................................................32<br />

X<br />

XG076 .................................................................................... 22<br />

XIAP, Human, Recombinant, E. coli ..................................65<br />

Y<br />

Y-27632 ...................................................................................57<br />

InSolution Y-27632 ...........................................................57<br />

Z<br />

Zaprinast ............................................................................... 58<br />

Zebularine ...............................................................................7<br />

Zinc (II) Protoporphyrin IX ................................................ 07<br />

(Z-LL) 2 Ketone...................................................................... 29<br />

ZM 336372 ......................................................................27, 55<br />

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7


Index<br />

Numerical Index<br />

60 ......................................... 4<br />

38 ........................................ 25<br />

7 2 ...........................................95<br />

480 ..........................................94<br />

4995 ....................................... 43<br />

529 ...........................................39<br />

5677...........................................94<br />

57 ......................................... 6<br />

30967 .............................. 98, 28<br />

34 03 ..................................... 29<br />

34 5 ...................................... 42<br />

35675 ........................................60<br />

52332 ..................................... 30<br />

58346 ...................................... 6<br />

65035 ...................................... 3<br />

00050 ................................... 0<br />

0005 .................................... 0<br />

00068 .................................. 49<br />

00069 .................................. 49<br />

00 09 ......................................93<br />

00 22 ...................9, 29, 33, 43<br />

00 28 ......................................46<br />

0 500 ................................... 25<br />

0 50 ................................... 25<br />

04550 .....................................93<br />

08975 ................................... 30<br />

0 0 .................................... 44<br />

0 5 .................................... 44<br />

0 23 ...............................82, 9<br />

0 75.................................... 25<br />

4666 ......................................72<br />

4802 .................................... 37<br />

4803 .................................... 37<br />

6805 ......................................35<br />

68 3 ......................................33<br />

68 4 ......................................33<br />

68 6 ......................................33<br />

68 9 ......................................33<br />

6825 ......................................34<br />

6845 ................................... 39<br />

6850 ................................... 39<br />

84 5 .......................................79<br />

2 760 ......................................46<br />

2 76 ......................................47<br />

2 762 ......................................47<br />

2 765 ......................................47<br />

2 767 ......................................47<br />

2 790 ......................................48<br />

2 850 ......................................48<br />

24005 ........................................ 4<br />

24008 ........................................ 4<br />

24009........................................ 4<br />

240 ........................................ 4<br />

240 2 ........................................ 4<br />

240 3 ........................................ 4<br />

240 4 ........................................ 4<br />

240 5 ........................................ 4<br />

240 7 ........................................ 4<br />

240 8 ........................................ 4<br />

240 9 ........................................ 4<br />

24020 ........................................ 5<br />

26850 ................................... 30<br />

26870 ............................... 5, 9<br />

2687 ............................... 5, 9<br />

28 25 ............................... 5, 9<br />

28 35 ............................... 5, 9<br />

2974 ......................................72<br />

29875 ................................... 25<br />

29876 .......................... 4 , 59<br />

29935 ......................................72<br />

54500 ................................... 0<br />

55 00 ......................................48<br />

55200 .................................... 0<br />

64300 .....................................79<br />

64585 .....................................79<br />

64602 ................................... 26<br />

64640 ..................................... 5<br />

65350......................................79<br />

69756 .................................... 26<br />

7 260 ........................................ 5<br />

7 26 .................................5, 84<br />

7 58 ......................................96<br />

7 586 ......................................96<br />

7 587 ......................................96<br />

7 588 ......................................96<br />

7 589 ......................................96<br />

72050 ......................................73<br />

75580 ......................................48<br />

76880 ................................... 60<br />

76900 ......................................25<br />

7690 .................................... 3<br />

769 0 .................................... 3<br />

78 96 .................................... 26<br />

78220 .................................... 26<br />

7822 .................................... 26<br />

78223 .................................... 26<br />

7825 .......................... 8, 26<br />

78273 ......................................72<br />

78276 ......................................73<br />

7828 .................................... 26<br />

78488 ......................................67<br />

78494 ......................................67<br />

8 350 ...............................88, 9<br />

820 5 ......................................70<br />

82300......................................93<br />

82540 ................................... 4<br />

89250 .................................... 26<br />

89300.................................... 5<br />

89400 ..............................77, 82<br />

89422 .................................... 47<br />

89480 ....................................... 7<br />

89482 ....................................... 7<br />

89484 ....................................... 7<br />

89485 ....................................... 7<br />

89825 ......................................7<br />

90080 .................................. 62<br />

9 500 ...................................... 9<br />

94348 .....................................80<br />

94950 .....................................80<br />

96000 ......................... 0 , 42<br />

96322 ......................................9<br />

96805 .....................................67<br />

968 0 ......................................67<br />

968 ......................................67<br />

96870 ............................ 70, 54<br />

9687 ................................... 54<br />

96872 ............................ 70, 54<br />

9722 ......................................48<br />

97900 ................................... 04<br />

9900 .................................... 26<br />

200 00.................................... 47<br />

200484 ................................... 26<br />

200485 ................................... 26<br />

203290 .....................................37<br />

20329 ......................................37<br />

203292 .....................................37<br />

203293 .....................................37<br />

203294 .....................................37<br />

203297......................................37<br />

203303 .....................................37<br />

203305 .....................................42<br />

203350 .................................. 60<br />

203389 .................................. 42<br />

203390 .................................. 42<br />

20339 ................................... 42<br />

203392 .................................. 42<br />

203600 ..................................... 5<br />

20367 .................................... 5<br />

203694 .....................................59<br />

203695 .....................................59<br />

203696 .....................................48<br />

203697 .....................................48<br />

20370 ......................................59<br />

203704 .....................................48<br />

203705......................................59<br />

203850 ................................... 0<br />

203895 .................................. 42<br />

203900 .................................. 42<br />

2039 2 ....................................<br />

203984 .................................. 42<br />

203987 .....................................48<br />

203994 ................................... 47<br />

203996 ................................... 47<br />

205530 ................................... 27<br />

20553 .................................... 27<br />

205546 .................. 9 , 05, 8<br />

207000 .....................................59<br />

20700 ......................................59<br />

208665 ......................... 42, 57<br />

2087 0 ........................................ 7<br />

2087 ........................................ 7<br />

2087 9 ................. 5, 25, 37<br />

20872 .......................... 5, 25<br />

208722.................................... 5<br />

208724 .................................... 5<br />

208725......................................37<br />

208726.................................... 5<br />

20873 .................................... 6<br />

208733 ................................... 6<br />

208734 ....................................... 7<br />

208742 .................................... 5<br />

208743 .................................... 5<br />

208744 .................................... 5<br />

208745 .................................... 5<br />

208748 .................................... 6<br />

208750 ......................... 5, 25<br />

20877 .................................... 6<br />

208772.................................... 6<br />

20885 ......................................59<br />

208900 ......................... 5, 27<br />

20890 ................................... 5<br />

208902 ................................... 5<br />

208904 ................................... 5<br />

208920 ....................................... 7<br />

20892 ........................................ 7<br />

208925 .....................................82<br />

2 0 50 ......................................59<br />

2 0 55 ......................................59<br />

2 200 ................................... 54<br />

2 274 .................................... 54<br />

2 875 .................................... 4<br />

2 59 .................................... 5<br />

2 592 ................... 95, 0, 57<br />

2 6200 .................................... 5<br />

2 7359 .................................... 27<br />

2 7504 ......................................37<br />

2 769 ......................................59<br />

2 7692 ......................................59<br />

2 7695 ...................................... 5<br />

2 7696 ...................................... 5<br />

2 7697 ...................................... 5<br />

2 77 3 ...................................... 5<br />

2 77 4 ............................... 6, 9<br />

2 7720 ............................... 6, 20<br />

2 8696 ........................................ 9<br />

2 8697 ........................................ 9<br />

2 8699 ........................................ 9<br />

2 8705 .................................9, 84<br />

2 8706 .................................9, 84<br />

2 8708 ........................................ 9<br />

2 8723 ......................................64<br />

2 8728 ......................................65<br />

2 8729 ......................................64<br />

2 8735 ......................................64<br />

2 8742 ......................................64<br />

2 8744 ......................................64<br />

2 8745 ......................................64<br />

2 8746 ......................................64<br />

2 8747 ......................................64<br />

2 8750 ......................................64<br />

2 8753 ......................................65<br />

2 8755 ......................................65<br />

2 8757 ......................................65<br />

2 8759 .............................. 65, 66<br />

2 876 ......................................65<br />

2 8766 ......................................65<br />

2 8767 ......................................65<br />

2 8772 ......................................66<br />

2 8773 .............................. 65, 66<br />

2 8775 .................................... 47<br />

2 8776 ......................................65<br />

2 8784 ......................................64<br />

2 8806 ......................................66<br />

2 88 4 ......................................64<br />

2 8825 ......................................66<br />

2 8826 ......................................65<br />

2 8830 ......................................64<br />

2 8832 ......................................65<br />

2 8840 .............................. 65, 66<br />

2 884 ......................................65<br />

2 9002 ......................................64<br />

2 9005 ......................................65<br />

2 9007 ......................................64<br />

2 9009......................................65<br />

2 90 ......................................64<br />

2 90 2 ......................................65<br />

2 9372 .................................... 27<br />

2 9377 .................................... 27<br />

2 9379 .................................... 27<br />

2 938 .................................... 27<br />

2 9385 .................................... 27<br />

2 9393 ................................... 28<br />

2 94 5 .................................... 27<br />

2 94 7 .................................... 27<br />

2 94 9 .................................... 27<br />

2 9420 ................................... 28<br />

2 942 .................................... 27<br />

2 9426 .................................... 27<br />

2 9427 .................................... 27<br />

2 9428 ...................................... 7<br />

2 9433 ................................... 28<br />

2 9435 ................................... 28<br />

2 9442 ...................................... 6<br />

2 9445 ...................................... 6<br />

2 9448...................................... 6<br />

2 9457 ...................................... 5<br />

2 9469 ......................................70<br />

2 9470 ......................................70<br />

2 9476 ...................................... 6<br />

2 9477 ...................................... 6<br />

2 9479 ...................................... 5<br />

2 9495 ................................... 28<br />

2 9557 .............................. 88, 89<br />

220005 ................................... 5<br />

220285 .....................................38<br />

220485 ..................................... 2<br />

220486 ..................................... 2<br />

22055 ................................... 60<br />

220557 .................................. 20<br />

230790 .................................. 28<br />

230906 .................................. 28<br />

23 085 ................................... 57<br />

233 00 ......................................48<br />

233 05 ................................... 20<br />

233 65 ......................................96<br />

234 0 ......................................85<br />

234 40 .................................... 7<br />

234 47 .................................... 7<br />

234 64 .................................... 7<br />

234450 ................................8, 50<br />

234490 .....................................5<br />

23449 .....................................5<br />

234503 ..................................... 6<br />

234505 .....................................48<br />

234599 ................................... 47<br />

235420......................................64<br />

23542 ......................................64<br />

235422......................................64<br />

235423......................................64<br />

235427 ......................................64<br />

235429......................................66<br />

236005 .....................................86<br />

2360 ......................................86<br />

2360 2 ......................................86<br />

238590 .....................................49<br />

23880 ...................................... 6<br />

238802 ..................................... 6<br />

238803 ..................................... 6<br />

238804 ..................................... 6<br />

238900 .....................................34<br />

239763 ................................... 60<br />

239764 ................................... 60<br />

239765 ................................... 60<br />

239783......................................88<br />

239802 ...................... 49, 86, 9<br />

239803 .................................. 62<br />

239804 .................................. 62<br />

239805 .................................. 42<br />

239835 .....................................59<br />

239900 .....................................59<br />

24089 ................................... 28<br />

25 400 ......................................93<br />

25 40 ......................................93<br />

25 600 .................................9, 49<br />

25 650 ......................................49<br />

25 700 ................................... 28<br />

25 755 ......................................59<br />

25 756 ......................................59<br />

25 800 ......................................82<br />

2520 0 ...................................... 2<br />

252740 ...............................5, 5<br />

253300 .....................................59<br />

253500 .................................. 57<br />

257920 ......................................80<br />

25954 .................................... 47<br />

259544 ................................... 47<br />

259580 ................................... 47<br />

260575 ................................... 48<br />

260585 ...........................49, 44<br />

260684 .................................. 48<br />

260905 .....................................77<br />

260920 .....................................7<br />

260960 ..................................... 8<br />

26096 ..................................... 8<br />

260962 ..................................... 8<br />

260963 ..................................... 8<br />

260964 ..................................... 8<br />

2620 5 ......................................77<br />

263200 .....................................59<br />

263202 .....................................59<br />

263203 .....................................59<br />

263225......................................38<br />

264 55 ......................................64<br />

264 56 ......................................64<br />

265005 ................................... 0<br />

268295 ..............................34, 49<br />

286888 .................................. 42<br />

2878 5 ............................ 95, 28<br />

287840 ............................. 86, 96<br />

287845......................................86<br />

28789 ........................................ 9<br />

287895 ......................................43<br />

287897 ......................................22<br />

288 04 ................................... 39<br />

288500 .................................. 04<br />

2987 ......................................77<br />

300230 ..............................4 , 94<br />

300260 ................................... 0<br />

300265 .................................. 42<br />

300270 .....................................79<br />

3 0500 ...............................4 , 57<br />

3 203 .................................... 0<br />

3 204 .................................... 0<br />

3 250 ......................................60<br />

3 7200 ......................................49<br />

3 7500 ......................................86<br />

3 762 ................................... 28<br />

3 7638 ................................... 28<br />

322328 ................................... 57<br />

324380 ......................................83<br />

324473 ......................................79<br />

324483 .....................................86<br />

324503................................... 29<br />

32462 ................................... 42<br />

324622................................... 42<br />

324625 ................................... 29<br />

324626 ................................... 29<br />

324630 .................................. 57<br />

324673 ......................................49<br />

324680 .....................................80<br />

324683 ..................9, 34, 38, 83<br />

324688 .....................................83<br />

32469 ................................... 29<br />

324692.......................... 8, 29<br />

324693................................... 60<br />

324694 .....................................49<br />

324744 .......................... 8, 29<br />

324745 .......................... 8, 29<br />

324759 .................................... 8<br />

324760 ......................................60<br />

324800 ................................... 37<br />

32480 .................................... 37<br />

72 Orders Phone 800 854 34 7<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

Fax 800 776 0999<br />

Web www.emdbiosciences.com/calbiochem


324875 ......................................92<br />

324880 ..............................7 , 80<br />

324890 .................................. 28<br />

32489 ................................... 28<br />

324895......................................60<br />

324905......................................83<br />

324930 ......................................49<br />

328000 .....................................25<br />

328005 .....................................25<br />

328006 .....................................25<br />

3298 5 ................................... 60<br />

330005 ......................... 6, 29<br />

330200 .................................. 29<br />

33 500 ................................... 57<br />

34 80 .................................... 0<br />

34 205 ......................................83<br />

34 206 ......................................83<br />

34 207 ...............................3 , 93<br />

34 2 .................................... 54<br />

34 246 .................................... 5<br />

34 248 ......................................88<br />

34 249 ......................................88<br />

34 25 ...................................... 6<br />

34 29 ......................................67<br />

34 325 ......................................88<br />

34 380 ......................................60<br />

342000 ........................... 64, 27<br />

344036 .....................................48<br />

344079 ............................. 86, 96<br />

344085 .................................. 42<br />

344095 .....................................89<br />

344 50 ................................... 44<br />

344 52 ................................... 45<br />

344 54 ................................... 45<br />

344280 .....................................60<br />

3445 0 ................................... 45<br />

3445 2 ................................... 45<br />

3445 4 ................................... 45<br />

344550 .................................. 45<br />

344555 .................................. 45<br />

344557 .................................. 45<br />

344559 .................................. 45<br />

344850 .....................................95<br />

344930 ................................... 8<br />

34493 ................................... 8<br />

344960 .................................. 29<br />

345670 .....................................98<br />

345805 ........................... 49, 49<br />

3458 0 ................................... 60<br />

3458 2 .................................... 6<br />

3458 4 ......................................95<br />

345834 ...................... 49, 83, 96<br />

345836 .....................................49<br />

345878 .................................. 45<br />

345880 .................................. 46<br />

345882 .................................. 46<br />

345883 .................................. 46<br />

345884 .................................. 46<br />

345885 .................................. 46<br />

347436 ................................... 29<br />

349254 .....................................87<br />

36 540 ......................................20<br />

36 54 ......................................20<br />

36 542 ......................................20<br />

36 545 ......................................2<br />

36 546 ......................................2<br />

36 547 ......................................20<br />

36 548 ......................................20<br />

36 549 ......................................20<br />

36 550 ...................................... 6<br />

36 550 ......................................20<br />

36 55 ......................................20<br />

36 552 ............................... 6, 20<br />

36 553 ......................................20<br />

36 554 ......................................20<br />

36 555 ......................................20<br />

36 556 ......................................20<br />

36 557 ...............................20, 84<br />

364200 .................................. 20<br />

364205 .................................. 20<br />

364206 .................................. 20<br />

3642 0 ................................... 20<br />

365250 .....................................38<br />

Calbiochem • <strong>Inhibitor</strong> SourceBook<br />

36525 ......................................38<br />

365252...............................29, 38<br />

365253 .....................................38<br />

368050 ............................. 65, 66<br />

368055 ............................. 65, 66<br />

368056 ............................. 65, 66<br />

368620 .....................................65<br />

369334 .................................. 29<br />

370654 .....................................44<br />

370655 .....................................44<br />

370666 .....................................43<br />

370674 ......................................43<br />

370677 ......................................43<br />

370679 ......................................43<br />

37 7 5 .......................... 46, 54<br />

37 806 ......................................49<br />

37 955 ....................... 34, 38, 44<br />

37 956 ......................................38<br />

37 957 ............................... 2, 2<br />

37 958 ......................................34<br />

37 96 .............................. 34, 44<br />

37 962 .................................9, 34<br />

37 963 .............................7, 9, 34<br />

37 964 .......................... 7, 34, 44<br />

37 966 ......................................44<br />

37 970 ....................... 34, 44, 56<br />

37 980 .................................... 0<br />

372770 ......................................38<br />

373225 .................................... 37<br />

373250 ................................... 29<br />

373260 ................................... 49<br />

373265 ................................... 49<br />

374000 .................................. 54<br />

375670 ......................................49<br />

3768 6 .................................... 5<br />

377230 ......................................92<br />

377980......................................38<br />

382 35 ................................... 29<br />

382 47 ......................................73<br />

382 48 ......................................74<br />

382 49 ......................................74<br />

382 65 ......................................75<br />

382 66 ......................................75<br />

382 67 ......................................75<br />

382 68 ......................................75<br />

382 69 ......................................75<br />

382425 ................................... 58<br />

385880 ........................... 25, 49<br />

385883 .....................................72<br />

385885 .....................................98<br />

385886 .....................................98<br />

390238 .....................................82<br />

39060 .................................. 46<br />

390602 .....................................56<br />

393204 .................................. 42<br />

397 00 ......................................49<br />

399250 .................................. 04<br />

399275 ................................... 04<br />

4000 0 .....................................64<br />

4000 ......................................64<br />

4000 2 .....................................64<br />

4000 5 .....................................64<br />

4000 9 .....................................64<br />

400022 .....................................64<br />

40005 ................................... 6<br />

400076 .............................. 0, 38<br />

400079 .................................. 43<br />

400085 ....................... 6, 2 , 26<br />

400090 ..................................... 0<br />

400 40 .....................................67<br />

400600 ................................... 0<br />

40 003 .....................................87<br />

40 006 .................................. 54<br />

40 474 ................................... 54<br />

40 477 ................................... 54<br />

40 478 ................................... 54<br />

40 479 ................................... 55<br />

40 480................................... 55<br />

40 48 ................................... 55<br />

40 482................................... 55<br />

40 483................................... 55<br />

40 485................................... 55<br />

40208 ..................................... 7<br />

402085 .............................. 7, 2<br />

402086 .............................. 7, 2<br />

402088 .............................. 7, 2<br />

405268 .....................................87<br />

405269 .....................................87<br />

405270 .....................................87<br />

40527 ......................................87<br />

406 70 ......................................23<br />

407247 ......................................49<br />

4077 0 ................................... 29<br />

407850 .....................................79<br />

407900 .....................................26<br />

4 0957 ................................... 58<br />

4 6 57 ................................... 55<br />

4 6200 ................................... 28<br />

4 9650 ......................................93<br />

4 9800 ......................................79<br />

4 9840 ......................................74<br />

420097 ............................. 50, 84<br />

420099 .....................................50<br />

420 0 ......................................50<br />

420 04 ......................................50<br />

420 06 ......................................50<br />

420 2 ......................................50<br />

420 6 ......................................22<br />

420 8 ......................................22<br />

420 9 ......................................22<br />

420 2 ......................................50<br />

420 22 ......................................50<br />

420 23 ......................................22<br />

420 26 ......................................50<br />

420 28 ......................................22<br />

420 29 ......................................23<br />

420 30 ......................................22<br />

420 3 ......................................23<br />

420 32 ......................................50<br />

4202 0 ................................... 62<br />

420297 ............. 7, 29, 34, 38, 44<br />

420298............. 7, 29, 34, 38, 44<br />

420305 .....................................38<br />

4203 .................................... 6<br />

4203 9 ................29, 34, 38, 44<br />

420320......................................34<br />

42032 ......................................44<br />

420323......................................34<br />

420345 .....................................87<br />

4204 .................................... 6<br />

420600 .....................................92<br />

42 050 ................................... 29<br />

422000 .............................. 7, 2<br />

422500 .................................. 48<br />

422685................................... 30<br />

422686................................... 30<br />

422688................................... 30<br />

422706 ........................................ 7<br />

422708 ........................................ 7<br />

422709 ........................................ 7<br />

4227 ........................................ 7<br />

4227 2 ........................................ 7<br />

422720 ................................... 46<br />

426 00 .................................... 37<br />

426 02 .................................... 37<br />

426 04 .................................... 37<br />

428 50 ......................................50<br />

428 60 ......................................50<br />

428205 ......................................50<br />

43 050 ......................................76<br />

43 05 ......................................76<br />

432077................................... 30<br />

43474 ...............................86, 92<br />

435300 .....................................50<br />

43530 .....................................50<br />

435302 .....................................50<br />

43770 ......................................90<br />

438 85 ......................................89<br />

438 86 ......................................89<br />

440025 .................................. 05<br />

440202 .....................................3<br />

440203 .....................................3<br />

440204 .....................................3<br />

440205 .................................. 06<br />

44 25 ................................... 30<br />

444042 .................................. 48<br />

444 68 ................................... 40<br />

444 69 ................................... 40<br />

444 70 ............................95, 46<br />

444 80 ......................................28<br />

444 85 ......................................28<br />

444 90 ......................................28<br />

444200 .................................. 40<br />

4442 8 .................................... 2<br />

444225 ................................... 2<br />

444237 ................................... 2<br />

444238 ................................... 2<br />

444239 ................................... 2<br />

444240 ................................... 2<br />

44424 .................................... 2<br />

444242.................................... 2<br />

444243 ................................... 2<br />

444244 .................................. 20<br />

444247 ................................... 20<br />

444249 ................................... 2<br />

444250 .................................. 20<br />

44425 .................................... 2<br />

444252 .................................. 22<br />

444253 .................................. 22<br />

444260 ................................... 2<br />

444264 .................................. 20<br />

444265 ................................... 2<br />

44427 ................................... 20<br />

444274 .................................... 2<br />

444278 .................................. 22<br />

444280 ................................... 2<br />

44428 ................................... 2<br />

444283 .................................. 22<br />

444285 ................................... 2<br />

444286 .................................. 20<br />

444300 ................................... 0<br />

444600 ................................... 0<br />

444605 ...........................38, 40<br />

444800 .....................................87<br />

444898 .................................. 43<br />

444937 .....................................26<br />

444938 .....................................26<br />

444939 .....................................26<br />

445800 .....................................83<br />

445825 .................................. 30<br />

448 0 ......................................50<br />

4537 0 ......................................28<br />

454202 .................................. 58<br />

454559 .....................................72<br />

454565 .....................................93<br />

457250 .................................. 06<br />

4596 6 ......................................60<br />

4596 8 ......................................6<br />

459620 .....................................6<br />

466220 ................................... 0<br />

472804.................................... 0<br />

474700 ......................................89<br />

474705 ......................................89<br />

474780 .................................... 37<br />

474790 .......................... 0 , 37<br />

47479 .................................... 37<br />

474925 ................................... 58<br />

475250 ................................... 58<br />

475740 ......................................90<br />

475800......................................26<br />

4758 4 ......................................60<br />

4758 5 ......................................60<br />

4758 6 ......................................60<br />

4758 8 ......................................60<br />

47582 ......................................60<br />

475837 ................................... 63<br />

475840 .................................. 58<br />

475863 ......................................26<br />

475865 ......................................94<br />

475876 ................................... 52<br />

475880 ......................................29<br />

475882 ......................................29<br />

475883 .................................... 0<br />

475886 ....................................<br />

475889 ......................................92<br />

475892 .................................... 0<br />

475950 ......................................60<br />

475975 ................................... 43<br />

47598 ......................................29<br />

Index<br />

476475 ......................................39<br />

476480 .....................................39<br />

476485......................................35<br />

476493......................................23<br />

476880 ........................................ 5<br />

479775 ......................................60<br />

4799 5 ................................... 43<br />

479975 ......................................92<br />

480025 .................................. 55<br />

480030 .................................. 55<br />

480060 .....................................68<br />

480065 .....................................68<br />

480066 .....................................68<br />

480 00 .....................................94<br />

480403 .....................................60<br />

48 406................................... 55<br />

48 407 ................................... 55<br />

48 408................................... 56<br />

48 480 ................................... 56<br />

48 486 ................................... 56<br />

48 500......................................39<br />

48 987 ...............................87, 97<br />

482 00 ....................................<br />

482240 ................................... 37<br />

48225 ......................................60<br />

482650 ................................... 2<br />

482655 ................................... 2<br />

482700 ................................... 2<br />

482702 ................................... 2<br />

482760 ................................... 2<br />

483 20 ....................................<br />

483 25 ....................................<br />

483400 ...................................<br />

484 00 ....................... 23, 26, 87<br />

484235 ...................................<br />

484500 ...................................<br />

490070 ...................................<br />

490075 ................................... 2<br />

49 207 ......................................72<br />

492025 ................................... 37<br />

492030 .................................. 06<br />

493800 .....................................79<br />

495320 .................................. 06<br />

495455 ......................... 43, 5<br />

495604 .....................................60<br />

495609 .....................................60<br />

495620 ..................................... 7<br />

49562 ...................................... 7<br />

495622 ..................................... 7<br />

495623 ..................................... 7<br />

495624...................................... 7<br />

496000 .................................. 0<br />

496 00................................... 43<br />

496 50 ......................................67<br />

4969 5 ................................... 56<br />

499600 .....................................5<br />

499700 .....................................74<br />

506 2 ......................................26<br />

506 26 ......................................26<br />

506 32 ......................................67<br />

506 34 ......................................67<br />

506 48...............................26, 84<br />

506274 ......................................94<br />

5 2729 ......................................79<br />

5 2732 ................................... 56<br />

5 2774 ....................................<br />

5 3000 ......................................26<br />

5 302 .................................... 6<br />

5 3022 .................................... 6<br />

5 3024 .................................... 6<br />

5 3030 ......................................26<br />

5 3032 ......................................5<br />

5 3033 ......................................5<br />

5 3035 ......................................5<br />

5 3036 ......................................84<br />

5 3040 ......................................5<br />

5 3 00 ................................... 48<br />

5 6354 ......................................70<br />

5 648 ................................... 30<br />

5 6485 ................................... 0<br />

5202 9 ................................... 30<br />

520222 .................................. 30<br />

520224 ................................... 30<br />

Technical Support<br />

Phone 800 628 8470<br />

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73


Index<br />

52 000 ......................................6<br />

52 230 ......................................5<br />

52 23 ......................................5<br />

52 232 ......................................5<br />

5233 0 ......................................87<br />

52437 ......................................90<br />

524390................................... 43<br />

524403 .....................................89<br />

524488 .....................................39<br />

524620......................................6<br />

524624 ......................................62<br />

524625......................................62<br />

524627 ......................................62<br />

524628......................................62<br />

5247 4 ................................... 58<br />

5247 7 ................................... 58<br />

5247 8 ................................... 58<br />

525 43 ......................................94<br />

525 45 ......................................94<br />

525276 ................................... 30<br />

525325......................................62<br />

527948 ................29, 34, 39, 5<br />

528 06 ......................................3<br />

528 08 ......................................32<br />

528 20 ......................................80<br />

528 40 ...................................... 7<br />

528 50 ......................................79<br />

528205 .................................. 59<br />

528208 .................................. 59<br />

5282 3 ................................... 59<br />

5282 4 ................................... 59<br />

528820 .....................................79<br />

529570 ........................... , 56<br />

529573......................................5<br />

529574 ......................................5<br />

529576 ......................................5<br />

529579......................................5<br />

52958 ................................. 8, 5<br />

535 40 ................................... 35<br />

535 4 ................................... 35<br />

535 42 ................................... 35<br />

5370 0 ................................... 30<br />

5370 .................................... 3<br />

537200 ...................................<br />

539 24 ................................... 34<br />

539 28 ................................... 34<br />

539 29 ................................... 34<br />

539 3 ................................... 32<br />

539 32 ................................... 32<br />

539 33 ................................... 33<br />

539 34 ................................... 32<br />

539 36 ................................... 33<br />

539 37 ................................... 33<br />

539 38 ................................... 34<br />

539 60 .................................... 37<br />

539 6 ................................... 38<br />

539 62 ................................... 38<br />

539 63 ................................... 38<br />

539 64 ................................... 38<br />

539 65 ................................... 38<br />

539 75 ................................... 38<br />

539 79 ................................... 38<br />

539209 ......................... 46, 60<br />

5395 6 ......................................6<br />

539522 .....................................40<br />

539542 .....................................40<br />

539552 .....................................6<br />

539560 .....................................39<br />

539572......................................42<br />

539573 .....................................42<br />

539604 .....................................39<br />

5396 0 ......................................39<br />

539620 .....................................6<br />

539624......................................39<br />

539630 .....................................62<br />

539634 .....................................39<br />

539636 .....................................39<br />

539638 .....................................6<br />

53965 ......................................42<br />

539652 .....................................39<br />

539654 .....................................39<br />

539658 .....................................42<br />

539677 .....................................42<br />

539678 .....................................42<br />

539679 .....................................42<br />

539684 .....................................35<br />

539685 .....................................42<br />

539686 .....................................42<br />

539687 .....................................42<br />

539690 ......................... 60, 6<br />

53974 ......................................6<br />

540200 .....................................6<br />

540205 .....................................6<br />

5402 0......................................6<br />

5402 ......................................6<br />

5402 5 ......................................6<br />

540222 ................................... 6<br />

5404 .................................... 6<br />

540500 ..................................... 7<br />

548000 ...................................<br />

55 476 ......................................65<br />

55 600 ...............................32, 94<br />

55 850 ...............................94, 98<br />

553003 .....................................55<br />

553008 .....................................55<br />

5532 ......................................84<br />

553400 ..............................52, 87<br />

553590 .....................................77<br />

554325 ..............................87, 97<br />

554725 ......................................52<br />

555550 .....................................56<br />

55555 ......................................56<br />

555552 ............................. 56, 84<br />

555553 .....................................56<br />

555554 .....................................56<br />

55688 .....................................77<br />

556883 .....................................77<br />

557303 .....................................72<br />

557322......................................6<br />

557330 .................................. 58<br />

557360 ..................................... 7<br />

557362...................................... 7<br />

557364 ..................................... 7<br />

557368 ................................... 5<br />

557370 ......................................40<br />

557403......................................72<br />

557440 .................................. 52<br />

557502 .................................. 58<br />

557508 .....................................40<br />

557509 .....................................40<br />

5575 4 ......................................40<br />

557520 ...............................2 , 40<br />

55752 ......................................40<br />

557525 ......................................40<br />

557550 ........................... 92, 38<br />

55755 ................................... 38<br />

559300 .....................................40<br />

559303 .................................. 63<br />

559307 .....................................40<br />

559387 .....................................27<br />

559388 .....................................26<br />

559389 .....................................27<br />

559396 .....................................27<br />

559397 .....................................26<br />

559398 .....................................27<br />

559399 .....................................27<br />

559400 .....................................27<br />

559402 ..................................... 2<br />

559403 .....................................26<br />

559404 .....................................27<br />

559407 .....................................27<br />

5594 8 ......................................74<br />

56 308 ......................................70<br />

565000 .................................. 34<br />

5656 0 ......................................87<br />

565625 .....................................27<br />

5657 5 ............................... 2, 4<br />

565730 .....................................74<br />

565749 ................................... 0<br />

565750 .................................. 0<br />

565755................................... 0<br />

565760 .................................. 0<br />

56576 ................................... 0<br />

565762................................... 0<br />

565763 .................................. 0<br />

565765................................... 03<br />

565766................................... 03<br />

565768 .................................. 02<br />

565770................................... 02<br />

56577 ................................... 02<br />

565772................................... 02<br />

565773 .................................. 02<br />

565774 ................................... 02<br />

565775 ................................... 02<br />

565777 .................................. 02<br />

565778................................... 02<br />

565780 .................................. 0<br />

565784 .................................. 02<br />

565787................................... 03<br />

565788 .................................. 0<br />

565789 .................................. 03<br />

565790 .................................. 03<br />

565833 .................................. 52<br />

566320 .....................................74<br />

56632 ......................................74<br />

567020 .....................................89<br />

56702 ......................................89<br />

56705 ......................................7<br />

567300 ...................................<br />

567305 ....................... 27, 87, 92<br />

567540 .....................................6<br />

567565 .....................................62<br />

567570 .................................... 6<br />

567630 .....................................87<br />

5677 5 ......................................95<br />

567725......................................40<br />

567726......................................40<br />

56773 ......................................57<br />

567750 .....................................74<br />

567790 ..............................52, 94<br />

567805 .....................................52<br />

567806 .....................................52<br />

5678 6 ......................................54<br />

568500 .................................. 40<br />

569396 .....................................35<br />

569397 ................29, 35, 4 , 44<br />

569620 .................................. 63<br />

570250....................................5, 8<br />

572625 ......................................52<br />

572630......................................52<br />

572632......................................52<br />

572635......................................52<br />

572636......................................52<br />

572650 ..................................... 7<br />

572660 .....................................52<br />

572888......................................52<br />

573500 ......................... 05, 56<br />

574 00 ......................................88<br />

574 02 ......................................88<br />

574 05 ......................................88<br />

574625 .....................62, 83, 43<br />

5747 .......................................52<br />

5747 2 ......................................52<br />

574775 ................................... 48<br />

579000 .....................................4<br />

579002 .....................................4<br />

579050 ................................... 7<br />

57905 .................................... 7<br />

579052 ................................... 4<br />

579053 ................................... 7<br />

580550 .....................................62<br />

58055 ......................................62<br />

58 004......................................8<br />

58 006......................................8<br />

58 007 ......................................8<br />

58 0 ......................................8<br />

58 800 ......................................4<br />

58 8 0 ......................................53<br />

5834 .................................... 6<br />

586005 .................................. 43<br />

589400 .....................................53<br />

5894 ....................................<br />

598226 ................................... 6<br />

5985 0 .......................... 22, 4<br />

6 2080 ................................... 23<br />

6 2084 ................................... 23<br />

6 2 00 ......................................79<br />

6 3450 ......................................85<br />

6 3560 ......................................8<br />

6 3570 ................................... 56<br />

6 357 ................................... 56<br />

6 4005.................................... 6<br />

6 4350 ................................... 63<br />

6 4800......................................83<br />

6 6370 .................................... 26<br />

6 637 .................................... 26<br />

6 6382 .................................... 3<br />

6 6387 ............................ 95, 3<br />

6 6399 .................................... 26<br />

6 645 ...............................53, 57<br />

6 6452 ...............................53, 57<br />

627608 .....................................64<br />

627609 .....................................64<br />

6276 0 ......................................64<br />

627624 .................................... 3<br />

643500 ...................................<br />

645905 ................................... 3<br />

647925 ......................................74<br />

647926 ......................................74<br />

648450 .....................................53<br />

650345 ................................... 3<br />

650357 ................................... 3<br />

654380 .................................. 48<br />

655200 ............................. 35, 53<br />

655203 ....................................... 8<br />

655230 .....................................53<br />

657008 .................................. 38<br />

6570 5 ......................................53<br />

65702 ......................................54<br />

658390 .....................................46<br />

658395 .....................................46<br />

658400 .....................................46<br />

65840 .....................................46<br />

658402 .....................................47<br />

658403 .....................................47<br />

658404 .....................................47<br />

658405 .....................................46<br />

658406 .....................................47<br />

658407 .....................................47<br />

658408 .....................................46<br />

658409 .....................................47<br />

6584 0 ......................................46<br />

6584 5 ......................................47<br />

6584 7 ......................................47<br />

6584 8 ......................................47<br />

658425 .....................................46<br />

658430 .....................................46<br />

658440 .....................................46<br />

658450 .....................................46<br />

658452 .....................................25<br />

658460 .....................................47<br />

658520 ............................. 48, 82<br />

658548 .....................................48<br />

658550 .....................................47<br />

65855 ......................................48<br />

658552 .....................................48<br />

658553 .....................................48<br />

662005 .....................................27<br />

662006 .....................................27<br />

662008 .....................................27<br />

6620 5 ................................... 63<br />

662035 .....................................94<br />

66204 ......................................94<br />

662056 .................................. 38<br />

662086 .................................. 38<br />

662089 .................................. 38<br />

676377 ................................... 52<br />

676380 .....................................74<br />

676475 ......................................53<br />

676480 .....................................53<br />

67648 .............................. 53, 54<br />

676485 .....................................53<br />

676487 .....................................53<br />

676489 .....................................54<br />

676492 .....................................54<br />

676497......................................54<br />

676498 ............................. 53, 84<br />

677500 .................................. 58<br />

679 30 ......................................4<br />

68 500 ...................................... 7<br />

68 625 ............................ 30, 58<br />

68 629 ......................................30<br />

68 629 ................................... 58<br />

68 635 ............................ 30, 58<br />

68 636 ............................ 30, 58<br />

68 675 ......................................32<br />

682300 .................................. 22<br />

684500 .................................. 58<br />

688000 .....................................57<br />

68800 .....................................57<br />

69 400......................................7<br />

69 550 ................................... 07<br />

692000 ..............................27, 55<br />

09587 ...................................39<br />

03-34-0002 ............................70<br />

03-34-0027 ............................70<br />

03-34-0029 ............................70<br />

03-34-0035 ............................70<br />

03-34-005 ................ 5, 27<br />

03-34-0052 ............................70<br />

03-34-0055 ............................70<br />

05-23-0 0 .......................... 39<br />

05-23-030 .......................... 4<br />

05-23- 70 .............................70<br />

05-23-4904 ............................39<br />

CBA003.................................. 22<br />

CBA042 .................................. 03<br />

PF0 9 ...................................... 23<br />

PF020 ..................................... 23<br />

PF02 ..................................... 23<br />

PF095 ..................................... 23<br />

PF096 ...................................... 24<br />

PF097 ...................................... 24<br />

PF098 ..................................... 23<br />

PF 22 ................................. 65, 66<br />

PF 37 .........................................65<br />

QIA40 ...................................... 24<br />

QIA54 ...................................... 24<br />

QIA55 ..................................... 22<br />

QIA56 ..................................... 22<br />

QIA63 ..................................... 22<br />

QIA73 ..................................... 22<br />

QIA 9 .................................... 49<br />

QIA 20 .................................... 6<br />

QIA 30 ................................... 22<br />

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purposes only, pursuant<br />

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Sold under license from<br />

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Adenosine 3´,5´-cyclic<br />

Monophosphorothioate, 8-Bromo-2´monobutyryl-,<br />

Rp-Isomer, Sodium Salt<br />

Adenosine 3´,5´-cyclic<br />

Monophosphorothioate, 8-Bromo-,<br />

Rp-Isomer, Sodium Salt<br />

Adenosine 3´,5´-cyclic<br />

Monophosphorothioate, 8-Chloro-,<br />

Rp-Isomer, Sodium Salt<br />

Adenosine 3´,5´-cyclic<br />

Monophosphorothioate, 2´-O-<br />

Monobutyryl-, Rp-Isomer, Sodium Salt<br />

Guanosine 3´,5´-cyclic<br />

Monophosphorothioate, Rp-Isomer,<br />

Triethylammonium Salt<br />

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Monophosphorothioate, 8-Bromo-,<br />

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68 3<br />

68 6<br />

68 9<br />

6825<br />

370666<br />

370674<br />

N-SMase <strong>Inhibitor</strong>, GW4869 5677 5<br />

Chk2 <strong>Inhibitor</strong> 220485<br />

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Cdk <strong>Inhibitor</strong>, CGP745 4A 2 7696<br />

JAK3 <strong>Inhibitor</strong> IV<br />

JAK3 <strong>Inhibitor</strong> V<br />

ZM 336372<br />

TIMP- , Recombinant, Human<br />

TIMP- , Recombinant, Bovine<br />

TIMP- ELISA Kit<br />

MMP- ELISA Kit<br />

TAPI-0<br />

TAPI-<br />

TAPI-2<br />

420 2<br />

420 22<br />

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PF0 9<br />

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QIA54<br />

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