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Columns and Supplies for HPLC

Columns and Supplies for HPLC

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60<br />

Basic <strong>HPLC</strong> troubleshooting<br />

Symptom Possible Cause Solution(s)<br />

Baseline disturbance Positive/negative–Difference in Use mobile phase <strong>for</strong> sample solvent<br />

at void time refractive index of injection solvent<br />

Detector leaks Catastrophic–Failed detector seal Replace seals/gaskets<br />

Drifting baseline Positive direction–Contaminant<br />

buildup/elution<br />

Flush column, cleanup sample, use pure solvents<br />

Negative direction (gradient)–<br />

Absorbance of ”A“ mobile phase solvent<br />

Use non-absorbing or <strong>HPLC</strong>-grade solvent<br />

Positive direction (gradient)–<br />

Absorbance of mobile phase ”B“<br />

Use higher UV wavelength<br />

Positive direction (gradient)–<br />

Absorbance of ”B“ mobile phase solvent<br />

Use non-absorbing or <strong>HPLC</strong>-grade solvents<br />

R<strong>and</strong>om–Temperature changes Insulate column <strong>and</strong> tubing<br />

R<strong>and</strong>om–Temperature changes Thermostat column <strong>and</strong> tubing<br />

Wavy or undulating–Temperature<br />

changes in room<br />

Monitor room temperature <strong>and</strong> control<br />

Ghost peaks Peaks from previous injection Flush column at end of run with strong solvent<br />

Contamination Flush column to remove contaminants<br />

Unknown interferences in samples Sample cleanup or pre-fractionation<br />

lon pair–Upset equilibrium Prepare sample in actual mobile phase to minimize<br />

disturbance<br />

Peptide mapping–Oxidation of TFA Prepare fresh daily; use anti-oxidant<br />

Reversed phase–Contaminated water Check suitability of water by running different<br />

amounts through reversed phase column <strong>and</strong><br />

measure peak height with elution; use <strong>HPLC</strong> grade<br />

Spikes–Bubbles in solvent De-gas solvents<br />

High column Column blockage with irrev. adsorbed Better sample cleanup; use guard column<br />

backpressure sample<br />

Too high mobile phase viscosity Use lower viscosity solvents or higher temperature<br />

Particle size too small Use larger dp packing<br />

Plugged inlet frit Replace end fitting<br />

Plugged inlet frit Reverse solvent flow<br />

Leak Subtle; white powder at fitting–<br />

Loose fitting<br />

Tighten fitting, cut tubing, or replace ferrule<br />

Leak, injection valve Catastrophic–Worn valve rotor Replace rotor in valve<br />

Leak, column or other<br />

fittings<br />

Catastrophic–Loose fittings Tighten or replace fitting<br />

Leak, pump Catastrophic–Pump seal failure Replace pump seal

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