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Proceedings - Interdisciplinary Center for Nanotoxicity

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76<br />

Table 2. Calculated scale factors <strong>for</strong> C4N2H4<br />

Conference on Current Trends in Computational Chemistry 2009<br />

HF/6‐31G*( α=9.90·10 ‐3 )<br />

N1 C2 C3 C4 C5 H6 H7 H8 H9 H10<br />

N1 0.9116 0.0101 0.0101 0.0015 0.0015 0.0124 0.0053 0.0053 0.0063 0.0063<br />

C2 0.0101 0.9037 0.0044 0.0107 0.0122 0.0015 0.0121 0.0042 0.0053 0.0061<br />

C3 0.0101 0.0044 0.9037 0.0122 0.0107 0.0015 0.0042 0.0121 0.0061 0.0053<br />

C4 0.0015 0.0107 0.0122 0.9037 0.0044 0.0101 0.0053 0.0061 0.0121 0.0042<br />

C5 0.0015 0.0122 0.0107 0.0044 0.9037 0.0101 0.0061 0.0053 0.0042 0.0121<br />

N6 0.0124 0.0015 0.0015 0.0101 0.0101 0.9116 0.0063 0.0063 0.0053 0.0053<br />

H7 0.0053 0.0121 0.0042 0.0053 0.0061 0.0063 0.9177 0.0040 0.0021 0.0073<br />

H8 0.0053 0.0042 0.0121 0.0061 0.0053 0.0063 0.0040 0.9177 0.0073 0.0021<br />

C9 0.0063 0.0053 0.0061 0.0121 0.0042 0.0053 0.0021 0.0073 0.9177 0.0040<br />

H10 0.0063 0.0061 0.0053 0.0042 0.0121 0.0053 0.0073 0.0021 0.0040 0.9177<br />

B3LYP/6‐31G* (α=5.21·10 ‐2 )<br />

N1 C2 C3 C4 C5 N6 H7 H8 H9 H10<br />

N1 0.9774 0.0015 0.0015 0.0006 0.0006 0.0013 0.0018 0.0018 0.0022 0.0022<br />

C2 0.0015 0.9748 0.0007 0.0013 0.0014 0.0006 0.0039 0.0023 0.0028 0.0016<br />

C3 0.0015 0.0007 0.9748 0.0014 0.0013 0.0006 0.0023 0.0039 0.0016 0.0028<br />

C4 0.0006 0.0013 0.0014 0.9748 0.0007 0.0015 0.0028 0.0016 0.0039 0.0023<br />

C5 0.0006 0.0014 0.0013 0.0007 0.9748 0.0015 0.0016 0.0028 0.0023 0.0039<br />

N6 0.0013 0.0006 0.0006 0.0015 0.0015 0.9774 0.0022 0.0022 0.0018 0.0018<br />

H7 0.0018 0.0039 0.0023 0.0028 0.0016 0.0022 0.9678 0.0030 0.0022 0.0034<br />

H8 0.0018 0.0023 0.0039 0.0016 0.0028 0.0022 0.0030 0.9678 0.0034 0.0022<br />

C9 0.0022 0.0028 0.0016 0.0039 0.0023 0.0018 0.0022 0.0034 0.9678 0.0025<br />

H10 0.0022 0.0016 0.0028 0.0023 0.0039 0.0018 0.0034 0.0022 0.0030 0.9678<br />

Results show good correspondence between experimental and fitted frequencies and<br />

closeness of the results of frequency correction with Cartesian scaling factors to the quality of<br />

their correction by scaling <strong>for</strong>ce matrices in internal coordinates. Quite predictably, scale<br />

factors <strong>for</strong> B3LYP simulations are much closer to unit matrices, and frequency fitting is<br />

considerably better. It shows that the model of correcting theoretical vibrational frequencies by<br />

means of scaling Cartesian <strong>for</strong>ce matrices is quite reasonable. Note that diagonal scale factors<br />

<strong>for</strong> similar atoms in benzene and pyrazine molecules are close <strong>for</strong> each theoretical level. The<br />

same is true <strong>for</strong> the pairs of bonded atoms (C, H); this shows good possibilities of transferring<br />

scale factors <strong>for</strong> the atoms in similar environment. It is also possible to apply the procedure <strong>for</strong><br />

each symmetry block individually, yielding somewhat better frequency fitting, similar to what is<br />

often done <strong>for</strong> the standard scaling approach. Small values of certain scale factors indicate the<br />

possibility of stipulating them as fixed zero elements in minimization procedure.<br />

Acknowledgements: This work was partly supported by RFFI grant No 08‐03‐00415‐а.<br />

References<br />

1. Tikhonov A N, Leonov A S, Yagola A G, Nonlinear Ill‐posed Problems. (Chapman&Hall,<br />

London), 1998<br />

2. Yagola A G, Kochikov I V, Kuramshina G M, Pentin Yu A, Inverse Problems of<br />

Vibrational Spectroscopy. (VSP, Zeist, The Netherlands), 1999.<br />

3. Kochikov I V, Kuramshina G M, Stepanova A V, Int J Quant Chem, 109 (2009) 28.<br />

4. Frisch M J. et. al. GAUSSIAN03, Revision C.02, (Gaussian Inc., Walling<strong>for</strong>d CT), 2004.<br />

5. Goodman L, Ozkabak A G, Thakur S N, J Phys Chem, 95 (1991) 9044.<br />

6. Breda S, et.al, J Mol Struct, 786 (2006) 193.)

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