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Factors affecting nitric oxide and nitrous oxide emissions from ...

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NH 4 +<br />

Ammonium<br />

Mono-oxygenase<br />

NH 2OH<br />

NO<br />

Hydroxylamine<br />

oxidoreductase<br />

(HNO)<br />

H 2O<br />

N 2O<br />

NO 2 -<br />

Figure 2.1 The microbial production of NO <strong>and</strong> N2O during nitrification<br />

Nitrification, by way of its products, is coupled to denitrification which is the stepwise<br />

reduction of NO3 - to dinitrogen (N2) (Fig. 2.2). Nitrate is reduced by nitrate reductase to NO2 -<br />

which is then reduced to NO <strong>and</strong> then to N2O by nitrite reductase <strong>and</strong> <strong>nitric</strong> <strong>oxide</strong> reductase<br />

respectively. Unlike nitrification NO <strong>and</strong> N2O are obligate intermediaries in the denitrification<br />

sequence. Denitrification is completed when N2O is reduced by <strong>nitrous</strong> <strong>oxide</strong> reductase to N2.<br />

Denitrifiers are predominantly heterotrophic facultative anaerobes. The proportion of N2O<br />

released during denitrification varies (Wrage et al., 2001): the proportion increases as soils<br />

become more acidic since <strong>nitrous</strong> <strong>oxide</strong> reductase is inhibited by acidic pH (Knowles, 1982);<br />

the ratio of N2O: N2 produced increases as the soil NO3 - concentration increases since NO3 - is<br />

preferred as an electron donor to N2O (Schlegel, 1992); as oxygen concentrations in the soil<br />

increase the fraction of N2O produced may also increase since N2O reductase is inhibited by<br />

lower concentrations of oxygen than the other reducing enzymes involved in denitrification<br />

(Knowles, 1982).<br />

NO 3 -<br />

Nitrate<br />

reductase<br />

NO 2 -<br />

Nitrite<br />

reductase<br />

Nitric <strong>oxide</strong><br />

reductase<br />

Nitrous<br />

<strong>oxide</strong><br />

reductase<br />

NO N2O N2 Figure 2.2 The microbial production of NO <strong>and</strong> N2O during denitrification<br />

Coupled nitrification-denitrification is not a separate process but merely implies that the<br />

products of nitrification (NO2 - <strong>and</strong> NO3 - ) can be used by denitrifies. It occurs because suitable<br />

niches for nitrification <strong>and</strong> denitrification can co-exist in close proximity <strong>and</strong> NO2 - , NO3 - or<br />

both can diffuse <strong>from</strong> nitrifying sites to denitrification sites in the soil. This process should<br />

not be confused with nitrifier-denitrification which is considered a nitrification pathway<br />

(Wrage et al., 2001). Nitrifier denitrification is performed by ammonia oxidisers which<br />

convert NH3 to NO2 - which is then reduced to N2O <strong>and</strong> N2 (Wrage et al., 2001) (Fig. 2.3). It is<br />

a process likely to occur as oxygen starts to become limiting <strong>and</strong> where carbon levels are low<br />

(Wrage et al., 2001). While nitrifier denitrification has been demonstrated in the laboratory<br />

NO 3 -<br />

(Poth & Focht, 1985), <strong>and</strong> there are valid reasons as to why it may occur in situ e.g. to<br />

conserve oxygen <strong>and</strong> to remove toxic NO2 - , its prevalence in situ is not well quantified.<br />

6

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