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ABI - TLDA user bulletin

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Applied Biosystems TaqMan ® Low Density Array<br />

Field Name<br />

Description<br />

Category<br />

Category ID<br />

Group<br />

Group ID<br />

Gene Symbol<br />

Gene Name<br />

Chromosome<br />

Species<br />

Target Exons<br />

NCBI Gene Reference<br />

Medline Reference<br />

Celera ID<br />

Cytogenic Band<br />

Category of the protein based on the PANTHER<br />

Protein Classification System, Level 1<br />

Unique 10-digit ID of the category<br />

Group of the protein based on the PANTHER Protein<br />

Classification System, Level 2<br />

Unique 10-digit ID of the group<br />

LocusLink symbol for the associated gene<br />

LocusLink gene name<br />

Chromosome on which the gene or SNP is found<br />

Organism for which the assay was designed<br />

The two exons (identified by public accession numbers)<br />

spanned by the probe<br />

NCBI transcript ID detected by the assay<br />

PubMed references for the gene<br />

Unique assay ID in the Celera Discovery System (CDS)<br />

Chromosomal band location of gene. If not available,<br />

the chromosome number is listed instead<br />

Viewing Contents of an AIF<br />

To view the contents of an assay information file in Microsoft Excel as a<br />

spreadsheet:<br />

1. 1. Place the TaqMan Array Information CD in the CD drive (typically D: or E:).<br />

2. 2. Launch Microsoft Excel.<br />

3. 3. Open the AIF.<br />

a. From the File menu, select Open.<br />

b. Navigate to the drive that contains the TaqMan Array Information CD.<br />

c. Select the AIF_prodNum.txt file and click Open.<br />

Microsoft Excel displays the contents of the file in a spreadsheet.<br />

20<br />

DRAFT<br />

User Bulletin<br />

February 3, 2006 11:10 am, 4371129.fm

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