CTRC-AACR <strong>San</strong> <strong>Antonio</strong> <strong>Breast</strong> <strong>Cancer</strong> <strong>Symposium</strong> P2-06-07 Exome sequencing identifies somatic mutations in basal-like breast cancer before and after neoadjuvant chemotherapy Jiang Y-Z, Yu K-D, Shao Z-M. Shanghai <strong>Cancer</strong> Center, Shanghai, Shanghai, China. Tumor Cell and Molecular Biology: Genetics - Germline Changes P2-07-01 BRCA1 regulates RHAMM function in breast cancer Fleisch MC, Yang Y, Mei Q, Sadat F, Brandi L, Iwaniuk KM, Honisch E, Maxwell CA, Niederacher D. Heinrich Heine University, Duesseldorf, Germany; University of British Columbia, Vancouver, BC, Canada. P6-07-31 Assessing germline Homologous Recombination pathway deficiency in BRCA1 mutation carriers using Single Cell Network Profiling Rosen DB, Leung LY, Louie B, Evensen E, Fields SZ, Cesano A, Shapira I, Hawtin RE. Nodality Inc, South <strong>San</strong> Francisco, CA; Monter <strong>Cancer</strong> Center, North Shore Long Island Jewish Medical School, Lake Success, NY. Tumor Cell and Molecular Biology: Genetics - Somatic Changes P2-08-01 PIK3CA mutations associate with decreased Ki67 in early stage breast cancer (BC) and better outcomes in patients even among those with low Ki67 tumors Datko FM, Patil S, Kalinsky K, Asher M, Wen YH, Hedvat C, Moynahan ME. Memorial Sloan-Kettering <strong>Cancer</strong> Center; Columbia University Medical Center. P2-08-02 The large scale structure of the HER-2/neu amplicon in breast cancer Pauletti G, Anderson L, Rong H-M, Yu J, Slamon DJ. David Geffen School of Medicine, University of California, Los Angeles, CA. P2-08-03 Phosphatidylinositol-3-kinase mutations are common in lobular neoplasia Troxell ML, Ang D, Warrick A, Beadling C, Corless CL. Oregon Health & Science University, Portland, OR. P2-08-04 HER2 gene status change after taxane based chemotherapy: be aware of mis-interpretation of polyploidization! Impact for patient management Valent A, Penault-Llorca F, Cayre A, Kroemer G. Institut Gustave Roussy, Villejuif, France; Centre Jean Perrin, Clermont-Ferrand, France. Tumor Cell and Molecular Biology: Epigenetics P2-09-01 Reactivation of epigenetically silenced retinoic acid receptorbeta for therapy of breast cancer- from molecular mechanism to potential clinical applications Ordentlich P, Nguyen N, Jin K, Sadik H, Han L, Sukumar S. Syndax Pharmaceuticals; Sidney Kimmel <strong>Cancer</strong> Center, Johns Hopkins University School of Medicine. P2-09-02 Epigenetic Regulation of histone variants - a role in hormone therapy resistant breast cancer? Nayak SR, Oesterreich S, Pathiraja T. Magee Women’s Research Institute, University of Pittsburgh Medical Center, Pittsburgh, PA; Lester & Sue Smith <strong>Breast</strong> Center, Baylor College of Medicine, Houston, TX. P2-09-03 Identifying a landscape of DNA methylation-driven genes in breast cancer using MethylMix Gevaert O, Plevritis S. Stanford University. P2-09-04 DNA methylation landscapes in ER-negative breast cancer Worsham MJ, Chen KM, Chitale D, Divine G. Henry Ford Health System, Detroit, MI. P2-09-05 Screening of significantly hypermethylated genes in breast cancer using MIRA-based microarray and identifying their expression levels Lian Z-q, Wang Q, Li W-p, Zhang A-q, Wu L. <strong>Breast</strong> Disease Center, Guangdong Women and Children Hospital of Guangzhou Medical College. P2-09-06 The structure design and biological activities of inhibitory peptides, which block the interactions among polycomb repressive complex 2 LI KK, Luo L, Kong X, Li L, Luo C. Rui Jin Hospital Affiliated with the Shanghai JiaoTong University School of Medicine, Shanghai, China; Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai, China. Prognostic and Predictive Factors: Prognostic Factors - Clinical P2-10-01 PAM50 gene signature is prognostic for breast cancer patients treated with adjuvant anthracycline and taxane based chemotherapy Liu MC, Pitcher BN, Mardis ER, Davies SR, Snider JE, Vickery T, Reed JP, DeSchryver K, Singh B, Friedman PN, Gradishar WJ, Perez EA, Martino S, Citron ML, Norton L, Winer EP, Hudis CA, Perou CM, Ellis MJ, Barry WT. Georgetown University Lombardi Comprehensive <strong>Cancer</strong> Center, Washington, DC; Duke University Medical Center, Durham, NC; Washington University, St. Louis, MO; Washington University School of Medicine, St. Louis, MO; New York University Medical Center, New York, NY; University of Chicago, IL; Robert H. Lurie Comprehensive <strong>Cancer</strong> Center, Northwestern University Feinberg School of Medicine, Chicago, IL; Mayo Clinic, Jacksonville, FL; The Angeles Clinic and Research Institute, <strong>San</strong>ta Monica, CA; Hofstra North Shore-LIJ School of Medicine, ProHEALTH Care Associates, Lake Success, NY; Memorial Sloan-Kettering <strong>Cancer</strong> Center, New York, NY; Dana Farber <strong>Cancer</strong> Institute, Harvard Medical School, Boston, MA; Lineberger Comprehensive <strong>Cancer</strong> Center, University of North Carolina at Chapel Hill, NC; Siteman <strong>Cancer</strong> Center, Washington University School of Medicine, St. Louis, MO. P2-10-02 Clinical validation of the PAM50 risk of recurrence (ROR) score for predicting residual risk of distant-recurrence (DR) after endocrine therapy in postmenopausal women with ER+ early breast cancer (EBC): An ABCSG study Gnant M, Filipits M, Mlineritsch B, Dubsky P, Jakesz R, Kwasny W, Fitzal F, Rudas M, Knauer M, Singer C, Greil R, Ferree S, Storhoff J, Cowens JW, Schaper C, Liu S, Nielsen T, On behalf of the ABCSG. Medical University of Vienna, Austria; Medizinische Universität Salzburg, Austria; A.ö. KH Wr. Neustadt, Wr. Neustadt, Austria; Hospital of the Sisters of Mercy, Linz, Austria; Nanostring Technologies, Seattle, WA; Vancouver Hospital, Vancouver, BC, Canada; MyRAQA Inc, Redwood Shores, CA; Vancouver Coastal Health, Vancouver, BC, Canada. P2-10-03 A cross-platform comparison of genomic signatures and OncotypeDx score to discover potential prognostic/predictive genes and pathways Kuderer NM, Barry WT, Geradts J, Ginsburg GS, Lyman GH, Datto M, Liotcheva V, Isner P, Veldman T, Agarwal P, Hwang S, Ready N, Marcom PK. Duke University Medical Center, Durham, NC. P2-10-04 The Mammostrat Test Is an Effective Tool To Stratify Patient Samples Previously Characterized as Intermediate by the Oncotype Dx Test Bloom KJ, Kyshtoobayeva A, Hilaire L, Gutekunst K. Clarient Diagnostic Services, Aliso Viejo, CA. P2-10-05 Continuous association of a 200-gene prognostic risk score with probability of neoadjuvant chemotherapy response and translation from fresh frozen to FFPE tissue for clinical use van Laar R, DiPaola J, Carbaugh H, Murphy T, DiRamio A, Flinchum R, Brown N, Albino T. Signal Genetics, New York, NY. P2-10-06 Multicenter I-SPY 1 TRIAL (CALGB 150007/150012): <strong>Breast</strong> cancer stem cells are associated with intrinsic chemoresistance and worse survival Landis MD, Yau C, Neumeister V, Rimm DL, I-SPY 1 TRIAL Investigators, Esserman L, Chang JC. The Methodist Hospital, Houston, TX; University of California, <strong>San</strong> Francisco, CA; Yale University School of Medicine, New Haven, CT. <strong>Cancer</strong> Res; 72(24 Suppl.) December 15, 2012 24s <strong>Cancer</strong> Research
December 4–8, 2012 Program Schedule P2-10-07 P2-10-08 P2-10-09 P2-10-10 P2-10-11 P2-10-12 Stem cell marker aldehyde dehydrogenase 1 in stromal cells strongly correlates with prognosis in breast cancer Sjöström M, Hartman L, Holmdahl J, Grabau D, Malmström P, Fernö M, Niméus-Malmström E. Lund University, Lund, Sweden. Prospective comparison of Recurrence Score and different definitions of luminal subtypes by central pathology assessment of single markers in early breast cancer: results from the phase III WSG-planB Trial Gluz O, Kreipe HH, Kates RE, Christgen M, Liedtke C, Shak S, Clemens M, Salem M, Liedtke B, Aktas B, Markmann S, Uleer C, Augustin D, Thomssen C, Nitz U, Harbeck N. West German Study Group, Moenchengladbach, NRW, Germany; Ev. Bethesda Hospital, Moenchengladbach, NRW, Germany; Medizinische Hochschule Hannover, Niedersachsen, Germany; University of Muenster, Muenster, Germany; Genomic Health, Inc., Germany; Clinics Mutterhaus, Trier, Germany; University of Cologne, Germany; Ev. Hospital, Bergisch Gladbach, Germany; University of Essen, Germany; Clinics Südstadt, Rostock, Germany; Gemeinschaftspraxis Hildesheim, Hildesheim, Germany; Clinics Deggendorf, Deggendorf, Germany; University of Halle, Germany; University of Munich, Munich, Bavaria, Germany. The incidence of false negative of HER2/Neu status in primary breast cancer in the era of standardized testing: a Canadian prospective study Hanna W, Barnes PJ, Chang MC, Gilks B, Magliocco A, Rees H, Robertson S, SenGupta SK, Nofech-Mozes S. Sunnybrook Health Sciences Centre; Capital Health District Authority; Mount Sinai Hospital; Vancouver General Hospital; Tom Baker <strong>Cancer</strong> Centre; Saskatoon City Hospital; Ottawa General Hospital; Kingston General Hospital. Clinical implications of molecular heterogeneity in highly proliferative, ER-positive, HER2-negative breast cancer Bianchini G, Pusztai L, Kelly CM, Iwamoto T, Callari M, Symmans WF, Gianni L. Ospedale <strong>San</strong> Raffaele, Milan, Italy; MD Anderson <strong>Cancer</strong> Center, Houston, TX; Mater Misericordiae University Hospital, Dublin, Ireland; Okayama University Hospital, Okayama, Japan; Fondazione IRCCS Istituto Nazionale dei Tumori, Milan, Italy. Prognostic performance of the EndoPredict score in nodepositive chemotherapy-treated ER+/HER2- breast cancer patients: results from the GEICAM/9906 trial Martin M, Brase JC, Ruiz-Borrego M, Krappmann K, Munarriz B, Fisch K, Ruiz A, Weber KE, Crespo C, Petry C, Rodriguez CA, Kronenwett R, Calvo L, Alba E, Carrasco E, Casas M, Caballero R, Rodriguez-Lescure A. Hospital General Universitario Gregorio Marañon, Madrid, Spain; Sividon Diagnostics GmbH, Cologne, Germany; Hospital Universitario Virgen del Rocio, Sevilla, Spain; Hospital Universitario La Fe, Valencia, Spain; Instituto Valenciano de Oncologia, Valencia, Spain; Hospital Universitario Ramon y Cajal, Madrid, Spain; Hospital Clinico Universitario de Salamanca, Salamanca, Spain; Complejo Hospitalario Universitario A Coruña, Coruña, Spain; Hospital Universitario Virgen de la Victoria, Malaga, Spain; GEICAM (Spanish <strong>Breast</strong> <strong>Cancer</strong> Research Group), Madrid, Spain; Hospital General Universitario de Elche, Alicante, Spain. How well predict the 2011 St Gallen early breast cancer surrogate phenotypes metastatic survival? Vanderstichele A, Brouckaert O, Tuyls S, Amant F, Leunen K, Smeets A, Berteloot P, Van Limbergen E, Weltens C, Peeters S, Moerman P, Floris G, Paridaens R, Wildiers H, Vergote I, Christiaens M-R, Van Calster B, Neven P. University Hospitals, Leuven, Belgium. CD4 positive tumor-infiltrating lymphocytes are associated with improved prognosis in node-negative breast cancer Schmidt M, van de <strong>San</strong>dt L, Boehm D, Sicking I, Battista M, Lebrecht A, Solbach C, Koelbl H, Gehrmann M, Rahnenführer J, Hengstler JG. University Hospital, Mainz, Germany; Technical University, Dortmund, Germany; Bayer, Leverkusen, Germany; Leibniz Research Centre for Working Environment and Human Factors (IfADo), Dortmund, Germany. P2-10-14 P2-10-15 P2-10-16 P2-10-17 P2-10-18 P2-10-19 Triple Negative <strong>Breast</strong> <strong>Cancer</strong>: prognosis of triple-negative breast cancers and non-triple-negative breast cancers in a large registry of certified breast units Kern P, Rezai M. <strong>Breast</strong> Unit Düsseldorf Louis Hospital, Düsseldorf, Northrhine-Westfalia, Germany. Evaluation of Prognostic and Predictive Performance of <strong>Breast</strong> <strong>Cancer</strong> Index and Its Components in Hormonal Receptor- Positive <strong>Breast</strong> <strong>Cancer</strong> Patients: A TransATAC Study Sgroi DC, Sestak I, Zhang Y, Erlander MG, Schnabel CA, Goss PE, Cuzick J, Dowsett M. Massachusetts General Hospital and Harvard Medical School, Boston, MA; Queen Mary University, London, United Kingdom; bioTheranostics Inc, <strong>San</strong> Diego, CA; Royal Marsden Hospital, London, United Kingdom. Quantitative HER3 protein expression and PIK3CA mutation status in matched samples from primary and metastatic breast cancer tissues and correlation with time to recurrence Sperinde J, Lara J, Michaelson R, Sun X, Conte P, Guarneri V, Barbieri E, Ali S, Leitzel K, Weidler J, Lie Y, Cook J, Haddad M, Paquet A, Winslow J, Howitt J, Hurley L, Eisenberg M, Petropoulos C, Huang W, Lipton A. Monogram Biosciences/Integrated Oncology/LabCorp, South <strong>San</strong> Francisco, CA; Saint Barnabas Medical Center, Livingston, NJ; University of Modena, Modena, Italy; Penn State/Hershey Medical Center, Hershey, PA; Lebanon VA Medical Center, Lebanon, PA; Laboratory Corporation of America, Research Triangle Park, NC. SET index predicts response to endocrine therapy rather than prognosis independently of other genomic signatures in a blinded validation study Karn T, Hatzis C, Symmans F, Pusztai L, Ruckhäberle E, Schmidt M, Müller V, Hanker L, Heinrich T, Holtrich U, Kaufmann M, Rody A. Goethe-University; Nuvera Biosciences; The University of Texas MD Anderson <strong>Cancer</strong> Center; Gutenberg-University Mainz; University Hospital Hamburg-Eppendorf; Saarland-University, Homburg. Cell Cycle Profiling – risk score (C2P-RS) based on the specific activity of CDK1 and CDK2 predicts relapse in node-negative, hormone receptor-positive breast cancer treated with endocrine therapy Kim SJ, Masuda N, Tsukamoto F, Inaji H, Akiyama F, Sonoo H, Kurebayashi J, Yoshidome K, Tsujimoto M, Takei H, Masuda S, Nakamura S, Noguchi S. Graduate School of Medicine, Osaka University, Suita, Osaka, Japan; National Hospital Organization Osaka National Hospital, Osaka, Japan; Osaka Koseinenkin Hospital, Osaka, Japan; Osaka Medical Center for <strong>Cancer</strong> & Cardiovascular Diseases, Osaka, Japan; The <strong>Cancer</strong> Institute of Japan Foundation for <strong>Cancer</strong> Research, Tokyo, Japan; Kawasaki Medical School, Kurashiki, Okayama, Japan; Osaka Police Hospital, Osaka, Japan; Saitama <strong>Cancer</strong> Center, Kita-Adachi, Saitama, Japan; Nihon University School of Medicine, Tokyo, Japan; Showa University School of Medicine, Tokyo, Japan. Are the mitotic factors Mitotic Activity Index (MAI) and Phosphohistone 3 (PPH3) stronger prognostic proliferation factors than Ki67 in node-negative breast cancer? Klintman M, Strand C, Gudlaugsson E, Janssen E, Skaland I, Malmström P, Baak J, Fernö M. Clinical Sciences, Lund University and Skåne University Hospital, Lund, Sweden; Stavanger University Hospital, Stavanger, Norway; Stavanger University Hospital and the Gade Institute, University of Bergen, Stavanger, Norway. P2-10-13 www.aacrjournals.org 25s <strong>Cancer</strong> Res; 72(24 Suppl.) December 15, 2012
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December 4-8, 2012 Author Index von