Beta vulgaris - Save Our Seeds
Beta vulgaris - Save Our Seeds
Beta vulgaris - Save Our Seeds
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Received 6 March 2003<br />
FirstCite®<br />
Accepted 19 March 2003<br />
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e-publishing<br />
Published online<br />
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50 Evidence for gene flow via seed dispersal from crop<br />
51 to wild relatives in <strong>Beta</strong> <strong>vulgaris</strong> (Chenopodiaceae):<br />
52 consequences for the release of genetically modified<br />
53 crop species with weedy lineages<br />
54 J.-F. Arnaud * , F. Viard†, M. Delescluse and J. Cuguen<br />
55 UMR CNRS 8016, Laboratoire de Génétique et Evolution des Populations Végétales, Bâtiment SN2, Université de Lille 1,<br />
56 59655 Villeneuve d’Ascq cedex, France<br />
57 Gene flow and introgression from cultivated to wild plant populations have important evolutionary and<br />
58 ecological consequences and require detailed investigations for risk assessments of transgene escape into<br />
59 natural ecosystems. Sugar beets (<strong>Beta</strong> <strong>vulgaris</strong> ssp. <strong>vulgaris</strong>) are of particular concern because: (i) they are<br />
60 cross-compatible with their wild relatives (the sea beet, B. <strong>vulgaris</strong> ssp. maritima); (ii) crop-to-wild gene<br />
61 flow is likely to occur via weedy lineages resulting from hybridization events and locally infesting fields.<br />
62 Using a chloroplastic marker and a set of nuclear microsatellite loci, the occurrence of crop-to-wild gene<br />
63 flow was investigated in the French sugar beet production area within a ‘contact-zone’ in between coastal<br />
64 wild populations and sugar beet fields. The results did not reveal large pollen dispersal from weed to wild<br />
65 beets. However, several pieces of evidence clearly show an escape of weedy lineages from fields via seed<br />
66 flow. Since most studies involving the assessment of transgene escape from crops to wild outcrossing<br />
67 relatives generally focused only on pollen dispersal, this last result was unexpected: it points out the key<br />
68 role of a long-lived seed bank and highlights support for transgene escape via man-mediated long-distance<br />
69 dispersal events.<br />
70 Keywords: <strong>Beta</strong> <strong>vulgaris</strong>; contact zone; cpDNA; crop–wild hybrids; GMO; microsatellites;<br />
71 risk assessment; weed beets1<br />
72<br />
73<br />
74 1. INTRODUCTION<br />
75 Over the last decade, the development of transgenic plants<br />
76 has heightened concerns about the potential negative<br />
77 effects of the wide-scale commercial release of genetically<br />
78 engineered crops (Darmency 1994; Raybould & Gray<br />
79 1994; Gray & Raybould 1998; Hails 2000). Among the<br />
80 commonly listed risks associated with environmental<br />
81 release of genetically engineered cultivars is the hybridiz-<br />
82 ation of transgenic plants with wild relatives, and the sub-<br />
83 sequent introgression of transgenic traits into the gene<br />
84 pool of wild plant populations in natural ecosystems<br />
85 (Ellstrand et al. 1999). Furthermore, the risk of a trans-<br />
86 genic crop escaping cultivation is likely to be higher in<br />
87 crops where non-transgenic varieties have weedy tend-<br />
88 encies (Raybould & Gray 1994; Bartsch et al. 1999). Even<br />
89 if gene flow between wild and cultivated relatives results<br />
90 in a transgene escape, its spread will obviously depend on<br />
91 the relative fitness enhancement attributable to the nature<br />
92 of the engineered trait, as well as on other factors such as<br />
93 hybrid fertility, particularly during seedling establishment<br />
94 (Van Raamsdonk & Schouten 1997; Bartsch et al. 1999;<br />
95 Hails 2000).<br />
96 With regard to crop/wild gene flow and its potential<br />
97 consequences, the <strong>Beta</strong> <strong>vulgaris</strong> complex is of particular<br />
98 interest as crop, wild and weedy forms can be found in<br />
99 parapatry or sympatry in Europe with overlapping flower-<br />
1<br />
*<br />
28 Author for correspondence (jean-francois.arnaud@univ-lille1.fr).<br />
29 † Present address: UMR 7127, EGPM, Station Biologique, Place<br />
30 Georges-Teissier, BP 74, 29682 Roscoff cedex, France.<br />
1<br />
2 Proc. R. Soc. Lond. B 03PB0216.1 © 2003 The Royal Society<br />
3 DOI 10.1098/rspb.2003.2407<br />
6<br />
ing periods, are wind-pollinated and all appear to be interfertile<br />
(Bartsch et al. 1999; Saeglitz et al. 2000). In<br />
northern France, the sugar beet (<strong>Beta</strong> <strong>vulgaris</strong> ssp.<br />
<strong>vulgaris</strong>) is an extensively cultivated plant. Numerous<br />
fields can be found close to the coastline where the common<br />
wild form (B. <strong>vulgaris</strong> ssp. maritima) also occurs.<br />
Conspecific weed beets, which germinate from the seed<br />
bank, are also present within the sugar beet fields. Previous<br />
studies demonstrated that these weeds result, primarily,<br />
from hybridization events between cultivated and<br />
wild inland beets within seed production areas for sugar<br />
beet (Boudry et al. 1993; Bartsch et al. 1999; Van Dijk &<br />
Desplanque 1999). Various concepts coexist as to which<br />
plants are weeds (Baker 1974). In the present study, the<br />
term ‘weed’ is used to define: (i) the in-row and out-row<br />
bolters found within crops and resulting from hybridization<br />
events; and (ii) beets encountered within man-disturbed<br />
habitats in the close vicinity of the agrosystem,<br />
such as roadsides, recently built slopes, etc. (Baker 1974;<br />
Hornsey & Arnold 1979; Desplanque et al. 2002). Sugar<br />
beets are biennial, in contrast to weed beets which<br />
inherited the possibility of first-year flowering from wild<br />
forms and bolt late in the growing season without the<br />
requirement of vernalization (dominant B allele; see Boudry<br />
et al. 1993). Sugar beet seed grown for commercial<br />
purposes in northern France contains a fraction of hybrid<br />
seeds and the resulting crop–wild F 1 hybrid plants are<br />
annuals, bolting, flowering and setting large amounts of<br />
seeds. These contaminant hybrids have given rise to<br />
weedy lineages; their crucial character ‘earliness of flowering’<br />
preadapts them for invasive success in cultivated beet<br />
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131 fields (Van Dijk & Desplanque 1999). Therefore, these<br />
132 characteristics place beets in a high-risk category in terms<br />
133 of the likelihood of transgene escape, since herbicide-<br />
134 resistant transgenic sugar beet lines already exist (Boudry<br />
135 et al. 1993; Van Raamsdonk & Schouten 1997;<br />
136 Desplanque et al. 2002; Viard et al. 2002).<br />
137 However, at the current time, there is no evidence for<br />
138 gene exchange between weedy lineages and wild coastal<br />
139 relatives in sugar beet production areas. Hybridizations<br />
140 are not necessarily confined to narrow zones of close para-<br />
141 patry, and long-distance pollen dispersal up to hundreds<br />
142 of metres away from the cultivated source could be sus-<br />
143 pected in this outcrossing species (Lavigne et al. 2002). In<br />
144 this context, we attempted to evaluate the genetic features<br />
145 of nearby populations located within the French area of<br />
146 sugar beet production (northern France) by analysing: (i)<br />
147 a typical wild coastal population; (ii) a neighbouring weed<br />
148 population situated within a sugar beet field; and (iii) an<br />
149 intermediate population located between the two latter.<br />
150 Such a linear sampling scheme reflects the geography of<br />
151 a potential contact zone and provides a unique opport-<br />
152 unity to evaluate gene exchange from sugar beet crops to<br />
153 coastal wild sea beet populations, and the distance at<br />
154 which pollen and seed dispersal occurs. In this study, the<br />
155 likelihood of weed seed migration was traced back using<br />
156 a maternally inherited chloroplastic marker diagnostic of<br />
157 cultivated lines (Ran & Michaelis 1995). Possible introgr-<br />
158 ession via pollen and/or seed flow was also investigated<br />
159 using nuclear microsatellite markers (Mörchen et al. 1996;<br />
160 Viard et al. 2002).<br />
161 2. MATERIAL AND METHODS<br />
162 (a) Sampling<br />
163 To investigate fine-scale crop–wild gene flow, three locations<br />
164 were sampled: (i) a natural coastal population of wild beets<br />
165 (named COAST); (ii) a weed population (named FIELD)<br />
166 located within a sugar beet field situated 1.5 km apart; and (iii)<br />
167 a contact zone with a possible mixture of wild and weedy beets,<br />
168 located along the river of Wimereux (named RIVER) (figure 1).<br />
169 The present studied area is characterized by the high incidence<br />
170 of sugar beet farming for more than 100 years and is typical of<br />
171 what can be found in northern France where sugar beet crops<br />
172 border the coast. From an intensive field survey, this study site<br />
173 was chosen as representative of a case of close contact between<br />
174 coastal sea beet populations (together with individuals sampled<br />
175 in the river embankments) and sugar beet fields found in close<br />
176 proximity.<br />
177 The COAST population is a typical sea beet population found<br />
178 along the seashore, with individuals located at the upper level<br />
179 of the high tide. The FIELD population is characteristic of the<br />
180 infestation of sugar beet fields by weed beets. Only weed plants<br />
181 bolting outside the sowing lines (‘out-row weeds’ following the<br />
182 terminology of Viard et al. (2002)) were sampled. Weedy forms<br />
183 found outside the rows of cultivation, were derived from crosses<br />
184 of either physiological bolters or in-row weeds found in the<br />
185 vicinity (Desplanque et al. 2002; Viard et al. 2002). The RIVER<br />
186 population represents a situation analogous to an estuarial zone,<br />
187 as there is an inland tide stream that can explain the colonization<br />
188 of the river embankments. Although cultivated and wild forms<br />
189 are often difficult to distinguish, the RIVER population was<br />
190 chosen to test for possible introgression because several individ-<br />
1<br />
2 Proc. R. Soc. Lond. B<br />
3<br />
ual beets displayed conspicuous morphological characters specific<br />
to cultivated lines.<br />
Approximately 20% of the individuals belonging to the<br />
COAST and FIELD populations were randomly sampled in<br />
order to achieve the best representation of the whole population.<br />
The sampling of the RIVER population was exhaustive (i.e. all<br />
individuals were collected). Altogether, 154 individuals were<br />
collected (see figure 1) and fresh leaves were desiccated using<br />
silica gels (Prolabo Inc.) prior to DNA extraction.<br />
(b) Genetic data collection<br />
Extraction and purification of total DNA was performed using<br />
a DNeasy 96 Plant Kit following the standard protocol for isolation<br />
of DNA from plant leaf tissue outlined in the DNeasy 96<br />
Plant protocol handbook (Qiagen Inc.).<br />
The maternal cultivated origin was assessed by means of a<br />
diagnostic chloroplastic PCR–RFLP marker. Weed beets carry<br />
the Owen cytoplasmic male sterility (CMS) (Boudry et al.<br />
1993), a trait maternally inherited and characterized by the<br />
inability of the plant to produce functional pollen. This CMS is<br />
typical of sugar beet cultivars because of its worldwide use in<br />
breeding. The Owen CMS cytoplasm is associated with one<br />
additional polymorphic HindIII site on chloroplast DNA (Ran &<br />
Michaelis 1995). Primers used, PCR conditions, and DNA<br />
digestion were applied as described by Ran & Michaelis (1995).<br />
HindIII-digested cpDNA products were separated using 0.8%<br />
agarose gel electrophoresis and visualized after ethidium bromide<br />
staining under UV light.<br />
Individuals were genotyped at six microsatellite loci (CT4,<br />
GTT1, GCC1, GAA1, BVM3 and CAA1) according to protocols<br />
previously described in Mörchen et al. (1996) and Viard et<br />
al. (2002). One additional unpublished microsatellite locus<br />
(CA2) was used with CCTTGCTAGTTGCTGCTGTG and<br />
GCATATGTACAAGAGAGCCGTTT as 5-3 primer<br />
sequences. CA2 is an imperfect and interrupted locus composed<br />
of TG repeats, allelic sizes range between 225 and 229 bp, and<br />
PCR conditions are identical to those described in Viard et al.<br />
(2002) except for the annealing temperature (55 °C). Electrophoresis<br />
and genotyping were performed on a LI-COR automated<br />
DNA sequencer model 4200s (LI-COR Inc., NB, USA).<br />
(c) Statistical treatments<br />
Allele frequencies, departures from Hardy–Weinberg equilibrium,<br />
linkage disequilibrium, allelic richness following the<br />
rarefaction procedure of El Mousadik & Petit (1996), gene<br />
diversity, and unbiased intrapopulation fixation index (Fis, a<br />
measure of departures from panmixia within populations) were<br />
calculated for each population using Fstat (Goudet 1995). Global<br />
differentiation among populations (Fst) was quantified following<br />
Weir & Cockerham (1984) and tested for significant<br />
departure from zero by randomly permuting multilocus genotypes<br />
among samples.<br />
The high number of alleles segregating at hypervariable<br />
microsatellite markers is likely to achieve a differentiation of all<br />
individuals that are uniquely defined, even with a small number<br />
of loci (e.g. Beaumont et al. 2001). To depict fine-scaled introgression<br />
from crop to wild relatives, and to test individual admixture<br />
proportions and the correspondence of genetic clusters with<br />
geographically labelled groups, we applied a model-based clustering<br />
algorithm introduced by Pritchard et al. (2000). Using the<br />
software Structure (Pritchard et al. 2000), this Bayesian<br />
method enables identification of clusters of genetically similar<br />
individuals from multilocus genotypes without prior knowledge<br />
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2<br />
3580<br />
581<br />
sugar beet production area<br />
100 m<br />
500 m<br />
1500 m<br />
FIELD<br />
FIELD<br />
n = 40<br />
the Channel<br />
COAST<br />
RIVER<br />
n = 38 n = 76<br />
river of Wimereux<br />
River 31<br />
river of Wimereux<br />
bridge<br />
River 62<br />
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584 Figure 1. Map of the sampled area. The three B. <strong>vulgaris</strong> populations are located within (COAST and RIVER) and in the<br />
585 vicinity (FIELD) of Wimereux city (northern France, 50°46 N; 1°37 W). n: sample size. The spatial distribution of the<br />
586 individuals sampled within the RIVER population is also given. Individuals characterized by the Owen cytoplasmic male<br />
587 sterility are indicated with a grey triangle, whereas individuals carrying a non-Owen cytoplasmic type are represented by a<br />
588 white circle. Scale bar, 50 m.<br />
252 of their population affiliation. In this approach, it is assumed<br />
253 that there are K populations contributing to the gene pool of<br />
254 the sampled populations. Individuals can have membership in<br />
255 multiple clusters, with membership coefficients summing to 1<br />
256 across clusters. Each run consisted of a burn-in period of<br />
257 200 000 steps followed by 106 MCMC (Monte Carlo Markov<br />
258 Chain) replicates, with the number K of specified clusters being<br />
259 from one to six and assuming that allele frequencies are uncorre-<br />
260 lated. Repeated runs of Structure produced identical results to<br />
261 those shown.<br />
262 3. RESULTS<br />
263 Chloroplastic DNA markers allowed us to distinguish<br />
264 the cytoplasm associated with Owen’s male sterility (found<br />
265 in cultivated sugar beets and their weedy relatives resulting<br />
266 from a crossing with a maternal cultivated plant) from<br />
267 other cytoplasms. All individuals from FIELD and<br />
268 COAST populations were characterized by the OwenCms<br />
269 and non-OwenCms haplotypes, respectively. This demon-<br />
270 strates that extensive seed dispersal does not occur from<br />
271 the fields into the coastal population of the area under<br />
272 study. However, the RIVER population was clearly par-<br />
273 titioned into two groups according to the cytoplasm<br />
1<br />
2 Proc. R. Soc. Lond. B<br />
3<br />
(figure 1). Twenty-five individuals out of 76, spatially<br />
clustered in the upstream part of the RIVER population,<br />
exhibited the OwenCms haplotype, indicating that one of<br />
their maternal ancestors was a cultivated individual.<br />
Therefore, in the further nuclear microsatellite analyses<br />
the RIVER population was partitioned into two subpopulations<br />
according to OwenCms and non-OwenCms lineages.<br />
No linkage disequilibrium occurred for microsatellite<br />
loci, except for pair CT4/CAA1 within the FIELD population<br />
( p 0.05, after Bonferroni adjustment). Multiple<br />
probability tests across all population samples yielded no<br />
significant p-adjusted values, showing the independence of<br />
each locus. Summary statistics about the genetic diversity<br />
within the four populations are given in table 1. Allele frequencies<br />
are available upon request. Allelic richness<br />
(Arich.) ranged from 2 to 16.95 across loci and populations,<br />
and amounts of gene diversity (He) were relatively<br />
high whatever the lineages considered (table 1). In contrast<br />
to OwenCms lineages (FIELD and OwenCms<br />
RIVER populations), no significant departures from<br />
Hardy–Weinberg equilibrium were detected for wild beet<br />
populations (COAST and non-OwenCms RIVER), as<br />
suggested by Fis values closed to zero (table 1). The<br />
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619 Table 1. Genetic diversity within the FIELD, COAST and RIVER populations.<br />
620 (The RIVER population was divided into two subpopulations according to the individual chloroplastic haplotypes (OwenCms<br />
621 versus non-OwenCms). A rich. : allelic richness estimated following the rarefaction method developed by El Mousadik & Petit<br />
622 (1996); He: expected heterozygosity (gene diversity); Fis: intrapopulation fixation index and its associated significance ( ∗ p<br />
623 624 0.05, ∗∗ p 0.01, ∗∗∗ p 0.001 after Bonferroni correction).)<br />
629 634<br />
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648 652<br />
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669 672<br />
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703 717<br />
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FIELD (n = 40) RIVER (n = 76) COAST (n = 38)<br />
OwenCms (n = 25) non-OwenCms (n = 51)<br />
locus A rich. He Fis A rich. He Fis A rich. He Fis A rich. He Fis<br />
CT4 6.62 0.82 0.33 ∗∗∗ 6.00 0.79 0.24 ∗ 5.34 0.60 0.07 8.49 0.62 0.05<br />
GTT1 3.00 0.66 0.28 ∗ 3.00 0.40 0.11 3.46 0.41 0.04 3.54 0.40 0.06<br />
GCC1 2.00 0.49 0.75 ∗∗∗ 2.00 0.37 0.07 2.00 0.49 0.04 2.00 0.50 0.00<br />
GAA1 2.62 0.33 0.09 2.00 0.39 0.085 2.97 0.38 0.13 3.00 0.45 0.04<br />
BVM3 9.52 0.67 0.52 ∗∗∗ 10.00 0.76 0.63 ∗∗∗ 15.39 0.91 0.20 ∗∗∗ 16.95 0.93 0.04<br />
CAA1 7.36 0.72 0.24 ∗ 9.00 0.74 0.46 ∗∗∗ 12.73 0.83 0.17 ∗∗ 12.21 0.85 0.08<br />
CA2 3.00 0.62 0.36 ∗ 4.00 0.59 0.46 ∗∗ 2.98 0.45 0.097 2.99 0.52 0.24<br />
mean 4.87 0.62 0.37 ∗∗∗ 5.14 0.57 0.33 ∗∗∗ 6.41 0.58 0.04 7.02 0.61 0.01<br />
873<br />
874 Table 2. Pairwise estimates of genetic differentiation (below diagonal) and their associate significance (above diagonal).<br />
875 876 ( ∗∗ p 0.01, n.s.: not significant, after Bonferroni correction.)<br />
882 888<br />
894<br />
900<br />
902 904<br />
906<br />
913<br />
920 927<br />
934<br />
941<br />
948<br />
955<br />
962<br />
969<br />
RIVER<br />
FIELD OwenCms non-OwenCms COAST<br />
FIELD —<br />
∗∗ ∗∗ ∗∗<br />
RIVER OwenCms 0.0536 —<br />
∗∗ ∗∗<br />
non-OwenCms 0.1726 0.2259 — n.s.<br />
COAST 0.1702 0.2257 0.0021 —<br />
298 observed heterozygote deficiencies in weeds (OwenCms<br />
299 lineages) could not be attributed to a particular locus, so<br />
300 that both selective effects and potential presence of null<br />
301 alleles can be neglected. Using permutation procedures<br />
302 implemented in Fstat, neither Arich., nor He showed sig-<br />
303 nificant differences between non-OwenCms and<br />
304 OwenCms lineages. Fis values were, however, significantly<br />
305 higher for OwenCms lineages ( p 0.001 after 10 000<br />
306 permutations).<br />
307 Although there were strong frequency oppositions, we<br />
308 did not find any diagnostic microsatellite alleles to dis-<br />
309 tinguish between cultivated–weed lineages and wild forms<br />
310 of B. <strong>vulgaris</strong> (data not shown). However, even at this<br />
311 microgeographical scale, noticeable significant genetic dif-<br />
312 ferentiation ( p 0.01) occurred between all pairwise<br />
313 population comparisons, with the clear exception of the<br />
314 COAST population and non-OwenCms individuals of the<br />
315 RIVER population (table 2). Such a lack of differentiation<br />
316 strongly suggests that all non-OwenCms individuals<br />
317 belong to the same breeding group. By assuming unin-<br />
318 formative priors on all the K inferred clusters, the Baye-<br />
319 sian clustering approach strongly strengthened this<br />
320 hypothesis. Genetic admixture analysis clearly indicated<br />
321 that the posterior probability for the proper number of<br />
322 clusters was maximum for K = 3 populations<br />
323 (LnP = 2794.7). By incorporating prior population<br />
324 information to assist the clustering, figure 2 revealed three<br />
325 clusters that: (i) discriminated well COAST/non-<br />
326 OwenCms RIVER beets (i.e. wild lineages) and<br />
1<br />
2 Proc. R. Soc. Lond. B<br />
3<br />
cluster 1<br />
River 31<br />
FIELD<br />
RIVER OwenCms<br />
RIVER non-OwenCms<br />
COAST<br />
River 62<br />
cluster 2 cluster 3<br />
Figure 2. Diagram of three inferred clusters of individuals<br />
assuming K = 3 populations using Structure (Pritchard et<br />
al. 2000). Each point shows the mean ancestry for an<br />
individual in the sample. The values of the three coefficients<br />
in the ancestry vector q(i) are given by the distances to each<br />
of the three sides of the equilateral triangle. After the<br />
clustering was performed, the points were labelled according<br />
to sampling location and cytoplasmic type, i.e. COAST<br />
(dark blue), FIELD (red), RIVER OwenCms (pink) and<br />
RIVER non-OwenCms (light blue).<br />
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River 31<br />
60<br />
40<br />
20<br />
River 62<br />
0 0.1<br />
0.2 0.3 0.4 0.5<br />
q<br />
0.6 0.7 0.8 0.9 1<br />
608<br />
609<br />
weeds<br />
610 Figure 3. Distribution of the mean individual admixture coefficients q estimated using Structure (Pritchard et al. 2000)<br />
611 without prior population information. In this analysis, K (the number of population contributing to the gene pool of all<br />
612 sampled individuals) is assumed to be 2. Individuals were ranked from lowest to highest q-values and ranks were plotted<br />
613 against q. Aq-value of 1 denotes a wild individual, whereas 0 denotes weedy individuals. Also displayed are lines giving the<br />
614 95% posterior probability intervals of q for each individual. The cytoplasmic status of individuals is represented by a grey<br />
615 diamond for a OwenCms cytoplasm and a white diamond for a non-OwenCms cytoplasm.<br />
wilds<br />
327 FIELD/OwenCms RIVER beets (i.e. weedy lineages); and<br />
328 (ii) clustered almost all wild individuals into the same<br />
329 cluster (i.e. cluster 1). Among the 89 individuals carrying<br />
330 the non-OwenCms haplotype, 80 fell into cluster 1, while<br />
331 no OwenCms individuals were assigned into this cluster.<br />
332 Instead, OwenCms individuals split into clusters 2 and 3<br />
333 in accordance with their spatial location, with, nonethe-<br />
334 less, some intermediate individuals (figure 2). Does the<br />
335 nuclear polymorphism mirror the cytoplasmic partitioning<br />
336 of individuals? By assuming K = 2 (LnP = 2837.5), we<br />
337 then reported the means for the individual admixture pro-<br />
338 portion qi and their 95% probability intervals in figure 3,<br />
339 as in Beaumont et al. (2001). It can be seen that there is<br />
340 strong evidence for two distinct groups. These two clusters<br />
341 were perfectly in accordance with the cytoplasmic classi-<br />
342 fication, with only six non-OwenCms (wild) individuals<br />
343 present in an intermediate position (0.2 q 0.8) with<br />
344 very wide probability limits for q-values. However, within<br />
345 the ‘wild part’ of the RIVER population (see figure 1),<br />
346 individuals ‘River 31’ and ‘River 62’ have a large pro-<br />
347 portion (0.912 and 0.976, respectively) of their nuclear<br />
348 genome that comes from the weedy lineage although they<br />
349 carry a non-OwenCms cytoplasm. Once again, no<br />
350 OwenCms individuals were assigned into the bulk of wild<br />
351 sea beets (figure 3).<br />
1<br />
2 Proc. R. Soc. Lond. B<br />
3<br />
4. DISCUSSION<br />
An increasing number of studies have documented gene<br />
exchanges from crops into their wild or weedy relatives,<br />
which can result in the long-term establishment of cultivar<br />
alleles in wild populations (Darmency 1994; Ellstrand et<br />
al. 1999). Lavigne et al. (2002) predicted the existence of<br />
substantial pollen-mediated gene flow from cultivated to<br />
wild beets, even in the case where wild beets are supposedly<br />
destroyed within 1000 m outside the fields. None the<br />
less, the use of nuclear microsatellite markers allowed us<br />
to depict a clear genetic cleavage between wild individuals<br />
and their weedy relatives. In addition to highlighting such<br />
a genetic distinctiveness, admixture analysis also suggested<br />
clustering in accordance with the maternal origin and very<br />
rare introgression events with only, at best, two individuals<br />
(1.29%) resulting from wild–weed hybridization events.<br />
Based on these results, this study surprisingly demonstrates<br />
that introgression via pollen dispersal into B. <strong>vulgaris</strong><br />
ssp. maritima populations occupying their natural<br />
habitat may not be the most likely route for transgene<br />
spread from agriculture (but see Gray & Raybould 1998).<br />
In fact, the occurrence of such gene exchanges may be<br />
limited because weedy beet populations usually suffer<br />
from a rapid turnover owing to farming practices (crop<br />
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363<br />
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365<br />
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1 03PB0216.6 J.-F. Arnaud and others Weed–wild interactions in <strong>Beta</strong> <strong>vulgaris</strong><br />
2<br />
3<br />
376 rotation) and have a limited flowering overlap with wild<br />
377 sea beets. The episodes of close parapatry between culti-<br />
378 vated beets and coastal populations are therefore neither<br />
379 continuous in time nor in space so that gene flow from<br />
380 the ‘weedy pollen pool’ may be spatially and temporally<br />
381 restricted. Weed plant species are indeed often distributed<br />
382 in ephemeral patches (Baker 1974; Hodkinson & Thomp-<br />
383 son 1997; McCauley 1997) and the location of the 25<br />
384 weed beets collected along the ‘Wimereux’ river matched<br />
385 well with recent dyke-building work and soil transport. In<br />
386 fact, 2 years after the first sampling, this population of<br />
387 weed beets was extinct, because of man-made disturb-<br />
388 ances (building and cleaning, personal observation2).<br />
389 In contrast to pollen dispersal, seeds remain in the vicin-<br />
390 ity of the seed source for the most part, and the long-<br />
391 distance component of seed dispersal distribution is often<br />
392 difficult to document (Levin 1981; Howe & Smallwood<br />
393 1982; Cain et al. 2000; and references therein). Many<br />
394 studies have reported that pollen dispersal is often the<br />
395 major contributor to gene flow in populations of wind-<br />
396 pollinated outcrossing plant species and that striking spa-<br />
397 tial genetic structuring is mainly the result of restricted<br />
398 seed dispersal (e.g. Hamrick & Nason 1996; McCauley<br />
399 1997; Latta et al. 1998; Laporte et al. 2001). None the<br />
400 less, we should bear in mind that dispersal occurs spatially<br />
401 by seed and pollen movement, but also occurs in time via<br />
402 the seed bank (Hodkinson & Thompson 1997; Raybould<br />
403 1999). In the present study, several lines of evidence show<br />
404 that seed migration can occur from fields to wild popu-<br />
405 lations, through weedy lineages via human activities such<br />
406 as soil transport. Individuals resulting from the emergence<br />
407 of a weed seed bank (generally found within sugar beet<br />
408 fields) were found only a few metres apart from typical<br />
409 sea beet individuals. Since most studies involving the<br />
410 assessment of transgene escape from crops to wild rela-<br />
411 tives generally focus only on pollen dispersal (reviewed in<br />
412 Lavigne et al. 2002) this last result was unexpected. It is<br />
413 interesting with regard to the processes associated with<br />
414 transgene escape in B. <strong>vulgaris</strong> (Gray & Raybould 1998),<br />
415 as well as other key aspects of the biology of plants, such as<br />
416 invasiveness or the evolution of metapopulation dynamics<br />
417 (Cain et al. 2000). Because beets have a long-lived seed<br />
418 bank and can shed thousands of seeds, this means that<br />
419 weeds are likely to reappear each spring despite stochastic<br />
420 disturbances (Desplanque et al. 2002). Together with<br />
421 stochastic founder effects, occasional long-distance seed<br />
422 dispersal, without regard to the extent of geographical sep-<br />
423 aration, also means that gene flow would not necessarily<br />
424 decline regularly as an exponential function of distance<br />
425 from the genetically engineered crop (Raybould & Gray<br />
426 1994; Van Raamsdonk & Schouten 1997).<br />
427 Evaluation of the relative contribution of pollen and<br />
428 seed movement using maternally (chloroplastic DNA) or<br />
429 biparentally (microsatellites) inherited markers is also<br />
430 especially interesting in weedy plant species (McCauley<br />
431 1997). In human-dispersed species, such as weedy forms<br />
432 of B. <strong>vulgaris</strong>, many colonization events may result from<br />
433 long-distance dispersal of a relatively few seeds into<br />
434 ephemeral vacant habitats, a situation in which extinction–<br />
435 recolonization models of genetic differentiation would be<br />
436 more adequate than classical models of gene flow<br />
437 (Hamrick & Nason 1996; McCauley 1997). Indeed, weed<br />
438 beets are adapted to man-disturbed habitats (e.g. very<br />
1<br />
2 Proc. R. Soc. Lond. B<br />
3<br />
high seed output in favourable environmental<br />
circumstances) and may display life histories equivalent to<br />
the demography assumed in the so-called metapopulation<br />
model (Hamrick & Nason 1996; Hanski 1999). Therefore,<br />
seed movement should be relatively common in the<br />
sugar beet production areas and may involve multiple<br />
colonization events through either the seed bank and/or<br />
human-mediated long-range dispersal. As (i) the weed<br />
population located along the river embankments is clearly<br />
differentiated from the neighbouring FIELD population;<br />
and (ii) substantial departures from Hardy–Weinberg<br />
equilibrium are found within both weed populations (<br />
Fis 0; see table 1), these findings highlight the occurrence<br />
of stochastic colonization events involving a mixture<br />
of genetically distinct individuals coming from several<br />
sources (Wahlund effect). Accordingly, an additional<br />
subclustering analysis using Structure showed that<br />
weedy individuals sampled within the sugar beet crop split<br />
into seven distinct clusters with the highest probability<br />
(results not shown). Hence, the evolution of B. <strong>vulgaris</strong><br />
weediness is likely to result from multiple exports of genetically<br />
differentiated crop–wild hybrids from the seed production<br />
areas, followed by secondary hybridization events<br />
(see also Viard et al. 2002).<br />
In conclusion, although pollen usually represents a significant<br />
vector for the spread of genetically modified traits,<br />
the present results suggest: (i) that seed flow may have<br />
a deeper and longer impact in connecting wild and crop<br />
relatives within the complex <strong>Beta</strong>; and (ii) point out the<br />
key role of a long-lived seed bank, a factor often neglected.<br />
The authors thank Jacqueline Bernard for technical advice and<br />
support. They are grateful to Henk Van Dijk and two anonymous<br />
referees for critical reading and helpful comments on<br />
earlier versions of the manuscript. This work was funded by a<br />
grant from the Bureau des Ressources Génétiques, the ACI<br />
Impact des OGM from the French Ministry of Research, the<br />
Contrat de Plan Etat/Région Nord-Pas-de-Calais. M.D. was<br />
supported by an INRA/Région Nord-Pas-de-Calais fellowship.<br />
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