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Lecture-Protecting Groups for Organic Synthesis

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<strong>Protecting</strong> <strong>Groups</strong> <strong>for</strong><br />

<strong>Organic</strong> <strong>Synthesis</strong><br />

Sanghee Kim<br />

School of Pharmacy,<br />

Seoul National University<br />

<strong>Protecting</strong> <strong>Groups</strong> <strong>for</strong> <strong>Organic</strong> <strong>Synthesis</strong><br />

General References:<br />

– Kocienski, P. J. <strong>Protecting</strong> <strong>Groups</strong>, 3rd ed.; Georg<br />

Thieme Verlag: New York, 2005.<br />

– Greene, T. W.; Wuts, P. G. M. Protective <strong>Groups</strong> In<br />

<strong>Organic</strong> <strong>Synthesis</strong>, 3rd ed.; John Wiley & Sons: New<br />

York, 1991.<br />

1


<strong>Protecting</strong> <strong>Groups</strong> <strong>for</strong> <strong>Organic</strong> <strong>Synthesis</strong><br />

Contents:<br />

• Protection of<br />

1. Hydroxyl groups<br />

2. Ketones and aldehydes<br />

3. Amines<br />

4. Carboxylic Acids<br />

5. Alkynes<br />

<strong>Protecting</strong> <strong>Groups</strong> <strong>for</strong> <strong>Organic</strong> <strong>Synthesis</strong><br />

<strong>Protecting</strong> groups ?<br />

– Protect functional groups which may be incompatible with a set<br />

of reaction conditions<br />

– 2 step process : introduction & removal must be efficient<br />

– Selectivity<br />

• selective protection<br />

• selective deprotection<br />

When one protective group is stable to conditions that cleave<br />

another and the converse is also true, these groups are often said<br />

to be to bear an orthogonal relationship.<br />

2


Acetals<br />

Hydroxyl <strong>Protecting</strong> <strong>Groups</strong><br />

Acetals<br />

Hydroxyl <strong>Protecting</strong> <strong>Groups</strong><br />

3


Acetals<br />

Hydroxyl <strong>Protecting</strong> <strong>Groups</strong><br />

Acetals<br />

Hydroxyl <strong>Protecting</strong> <strong>Groups</strong><br />

4


Acetals<br />

Hydroxyl <strong>Protecting</strong> <strong>Groups</strong><br />

Acetals<br />

Hydroxyl <strong>Protecting</strong> <strong>Groups</strong><br />

5


Ethers<br />

Hydroxyl <strong>Protecting</strong> <strong>Groups</strong><br />

Ethers<br />

Hydroxyl <strong>Protecting</strong> <strong>Groups</strong><br />

6


Ethers<br />

Hydroxyl <strong>Protecting</strong> <strong>Groups</strong><br />

Ethers<br />

Hydroxyl <strong>Protecting</strong> <strong>Groups</strong><br />

7


Ethers<br />

Hydroxyl <strong>Protecting</strong> <strong>Groups</strong><br />

Silyl Ethers<br />

Hydroxyl <strong>Protecting</strong> <strong>Groups</strong><br />

8


Silyl Ethers<br />

Hydroxyl <strong>Protecting</strong> <strong>Groups</strong><br />

Silyl Ethers<br />

Hydroxyl <strong>Protecting</strong> <strong>Groups</strong><br />

9


Silyl Ethers<br />

Hydroxyl <strong>Protecting</strong> <strong>Groups</strong><br />

Silyl groups are typically deprotected with a source of<br />

fluoride ion.<br />

The Si–F bond strength is about 30 kcal/mol stronger than<br />

the Si–O bond.<br />

Hydroxyl <strong>Protecting</strong> <strong>Groups</strong><br />

Silyl Ethers<br />

10


Silyl Ethers<br />

Hydroxyl <strong>Protecting</strong> <strong>Groups</strong><br />

Silyl Ethers<br />

Hydroxyl <strong>Protecting</strong> <strong>Groups</strong><br />

11


Esters<br />

& Carbonates<br />

Hydroxyl <strong>Protecting</strong> <strong>Groups</strong><br />

Hydroxyl <strong>Protecting</strong> <strong>Groups</strong><br />

Esters & Carbonates<br />

12


Esters<br />

Hydroxyl <strong>Protecting</strong> <strong>Groups</strong><br />

In general, the susceptibility of esters to base catalyzed<br />

hydrolysis increases with the acidity of the product acid.<br />

Esters<br />

Hydroxyl <strong>Protecting</strong> <strong>Groups</strong><br />

13


Esters<br />

Hydroxyl <strong>Protecting</strong> <strong>Groups</strong><br />

Esters<br />

Hydroxyl <strong>Protecting</strong> <strong>Groups</strong><br />

14


Carbonates<br />

Hydroxyl <strong>Protecting</strong> <strong>Groups</strong><br />

Carbonates<br />

Hydroxyl <strong>Protecting</strong> <strong>Groups</strong><br />

15


Carbonates<br />

Hydroxyl <strong>Protecting</strong> <strong>Groups</strong><br />

Hydroxyl <strong>Protecting</strong> <strong>Groups</strong><br />

Phenolic protective groups<br />

16


1,2 and 1,3-diols<br />

Hydroxyl <strong>Protecting</strong> <strong>Groups</strong><br />

1,2 and 1,3-diols<br />

Hydroxyl <strong>Protecting</strong> <strong>Groups</strong><br />

17


1,2 and 1,3-diols<br />

Hydroxyl <strong>Protecting</strong> <strong>Groups</strong><br />

1,2 and 1,3-diols<br />

Hydroxyl <strong>Protecting</strong> <strong>Groups</strong><br />

Selective protection of polyols:<br />

18


1,2 and 1,3-diols<br />

Hydroxyl <strong>Protecting</strong> <strong>Groups</strong><br />

Selective protection of polyols:<br />

1,2 and 1,3-diols<br />

Hydroxyl <strong>Protecting</strong> <strong>Groups</strong><br />

Selective protection of polyols:<br />

19


1,2 and 1,3-diols<br />

Hydroxyl <strong>Protecting</strong> <strong>Groups</strong><br />

1,2 and 1,3-diols<br />

Hydroxyl <strong>Protecting</strong> <strong>Groups</strong><br />

20


1,2 and 1,3-diols<br />

Hydroxyl <strong>Protecting</strong> <strong>Groups</strong><br />

1,2 and 1,3-diols<br />

Hydroxyl <strong>Protecting</strong> <strong>Groups</strong><br />

21


1,2 and 1,3-diols<br />

Hydroxyl <strong>Protecting</strong> <strong>Groups</strong><br />

1,2 and 1,3-diols<br />

Hydroxyl <strong>Protecting</strong> <strong>Groups</strong><br />

22


Carbonyl <strong>Protecting</strong> <strong>Groups</strong><br />

Carbonyl <strong>Protecting</strong> <strong>Groups</strong><br />

23


Carbonyl <strong>Protecting</strong> <strong>Groups</strong><br />

Carbonyl <strong>Protecting</strong> <strong>Groups</strong><br />

24


Carbonyl <strong>Protecting</strong> <strong>Groups</strong><br />

Carbonyl <strong>Protecting</strong> <strong>Groups</strong><br />

25


Carbonyl <strong>Protecting</strong> <strong>Groups</strong><br />

Carbonyl <strong>Protecting</strong> <strong>Groups</strong><br />

A variety of methods has been developed <strong>for</strong> the cleavage of S,S''-<br />

dialkyl acetals, largely due to the fact that these functional groups are<br />

often difficult to remove.<br />

26


Carbonyl <strong>Protecting</strong> <strong>Groups</strong><br />

Esters <strong>for</strong> acid<br />

Carbonyl <strong>Protecting</strong> <strong>Groups</strong><br />

27


Esters <strong>for</strong> acid<br />

Carbonyl <strong>Protecting</strong> <strong>Groups</strong><br />

Esters <strong>for</strong> acid<br />

Carbonyl <strong>Protecting</strong> <strong>Groups</strong><br />

28


Esters <strong>for</strong> acid<br />

Carbonyl <strong>Protecting</strong> <strong>Groups</strong><br />

Esters <strong>for</strong> acid<br />

Carbonyl <strong>Protecting</strong> <strong>Groups</strong><br />

29


Amine <strong>Protecting</strong> <strong>Groups</strong><br />

General <strong>Protecting</strong> <strong>Groups</strong><br />

Amine <strong>Protecting</strong> <strong>Groups</strong><br />

General preparation<br />

Bases that are typically employed are tertiary amines or aqueous hydroxide.<br />

30


Carbamates<br />

Amine <strong>Protecting</strong> <strong>Groups</strong><br />

Carbamates<br />

Amine <strong>Protecting</strong> <strong>Groups</strong><br />

31


Carbamates<br />

Amine <strong>Protecting</strong> <strong>Groups</strong><br />

Carbamates<br />

Amine <strong>Protecting</strong> <strong>Groups</strong><br />

32


Amides<br />

Amine <strong>Protecting</strong> <strong>Groups</strong><br />

Sulfonamides<br />

Amine <strong>Protecting</strong> <strong>Groups</strong><br />

33


Sulfonamides<br />

Amine <strong>Protecting</strong> <strong>Groups</strong><br />

Alkyne <strong>Protecting</strong> <strong>Groups</strong><br />

• Typical silyl groups include TMS, TES, TBS, TIPS, and TBDMS.<br />

• Many silyl acetylenes are commercially available, and are useful acetylene<br />

equivalents.<br />

34


Alkyne <strong>Protecting</strong> <strong>Groups</strong><br />

Silyl chorides are suitable <strong>for</strong> smaller silyl groups, but the preparation of more<br />

hindered silyl acetylenes may require the use of the more reactive silyl triflate.<br />

Alkyne <strong>Protecting</strong> <strong>Groups</strong><br />

35


Alkyne <strong>Protecting</strong> <strong>Groups</strong><br />

Unpublished result of S. Kim<br />

36

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