What is a domain?

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Domain prediction - Theoretical approach Soybean Lipoxygenase-1 MFSAGHKIKGTVVLMPKNELEVNPDGSAVDNLNAFLGRSVSLQLISATKADAHGKGKVGKDTFLEGINT SLPTLGAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNTKLYKS VRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEKLARPVLGG SSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLK STPIEFHSFQDVHDLYEGGIKLPRDVISTIIPLPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFARE MIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITADSLDLDGYTMDEALGSRRLFMLDYHDIFMPYVRQI NQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSC YHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGIIETTFLPSKYS VEMSSAVYKNWVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAAIKTWVQEYVPLYYA RDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCLIIIWIASALHAAVNFGQYPYGG LIMNRPTASRRLLPEKGTPEYEEMINNHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTS DSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI
Pfam - Protein families database Bateman A, Coin L et. al. The Pfam protein families database. Nucleic Acids Res. 2004 Jan 1;32 (Database <strong>is</strong>sue):D138-41. http://www.sanger.ac.uk/software/pfam/
Page 1 and 2: Protein Engineering 15hp Protein St
Page 3 and 4: What is a domain An evolutionary co
Page 5 and 6: Alpha & Beta Domains 5
Page 7 and 8: Alpha domains Myohemerythrin (2mhr)
Page 9 and 10: Beta domains Immunoglobulin Light c
Page 11 and 12: Beta domains Transthyretin One subu
Page 13 and 14: Alpha/Beta, Alpha+Beta & Cross-Link
Page 15 and 16: Alpha/Beta domains Triosephosphate
Page 17 and 18: Alpha+Beta domains TATA-binding pro
Page 19 and 20: Cross-linked domains Human Zinc-fin
Page 21 and 22: Protein Interaction Domains Human C
Page 23 and 24: Protein Interaction Domains Yeast S
Page 25 and 26: The Universe of Protein Structures
Page 27 and 28: Domain superfamilies Multi-domain p
Page 29 and 30: Mycobacterium tuberculosis IdeR Iro
Page 31 and 32: Soybean Lipoxygenase-1
Page 33 and 34: Saccharomyces cerevisiae FAS Fatty
Page 35: Why predict domains Sequence alignm
Page 39 and 40: Armadillo - Domain Linker Predictio
Page 41 and 42: FoldIndex - Finds unfolded regions
Page 43 and 44: Limited proteolysis Proteolysis SDS
Page 45 and 46: CoFi-blot Erase-a-base process
Page 47: Textbook Petsko & Ringe Protein Str

What is a domain?

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