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Best practices for chemical data curation and QSAR model ...

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COMBINATORIAL <strong>QSAR</strong><br />

SAR Dataset<br />

Dragon descriptors<br />

Chirality descriptors<br />

Molconn Z<br />

descriptors<br />

COMFA descriptors<br />

Volsurf descriptors<br />

Comma descriptors<br />

Compound representation<br />

<strong>QSAR</strong> <strong>model</strong>ing<br />

C-Qics<br />

g<br />

Selection of best <strong>model</strong>s<br />

KNN<br />

SVM<br />

DECISION TREE<br />

BINARY <strong>QSAR</strong>,…<br />

MOE descriptors<br />

Model validation<br />

using Y-R<strong>and</strong>omization<br />

<strong>and</strong> external test sets<br />

Lima, P., Golbraikh, A., Oloff, S., Xiao, Y., Tropsha, A. Combinatorial <strong>QSAR</strong> Modeling of P-Glycoprotein<br />

Substrates. J. Chem. Info. Model., 2006 46, 1245-1254.<br />

Kovatcheva, A., Golbraikh, A., Oloff, S., Xiao, Y., Zheng, W., Wolschann, P., Buchbauer, G., Tropsha, A.<br />

Combinatorial <strong>QSAR</strong> of Ambergris Fragrance Compounds. J Chem. Inf. Comput. Sci. 2004, 44, 582-95

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