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Best practices for chemical data curation and QSAR model ...

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<strong>QSAR</strong> vs. Docking: Application of <strong>QSAR</strong><br />

Approaches to the Analysis of Binding Decoys<br />

Decoys are frequently<br />

indistinguishable from binders<br />

using typical SB scoring<br />

functions.*<br />

Characteristic AmpC Lig<strong>and</strong>s <strong>and</strong> Decoys <strong>and</strong> Their Ranks by Different Scoring<br />

Functions. Blue = DOCK, magenta = ScreenScore, yellow = FlexX, cyan = PLP, purple<br />

= PMF, <strong>and</strong> red = SMoG (SMoG ranks are based on a ranking, which does not include<br />

halogenated compounds).<br />

*J. Med. Chem. 2005, 48, 3714-3728

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