Protein structure and dynamics

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Protein structure and dynamics

Protein structure and dynamics

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Key concepts<br />

• <strong>Protein</strong>s have well defined 3D <strong>structure</strong><br />

• Structural hierarchy: from primary to tertiary<br />

•<br />

• <strong>Protein</strong>s are not static

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Key concepts • <strong>Protein</strong>s have well defined 3D <strong>structure</strong> • Structural hierarchy: from primary to tertiary • • <strong>Protein</strong>s are not static

A protein consists of a sequence of amino acids bound by peptide bonds

Page 1: Protein structure and dynamics Arte
Page 5 and 6: Definition of dihedral angles Range
Page 7 and 8: The peptide plane
Page 9 and 10: Side chains enjoy additional degree
Page 11 and 12: A closer look at Alpha-helix Helica
Page 13 and 14: Supersecondary structures Schematic
Page 15 and 16: Contact Maps Describe Protein Topol
Page 17: The Protein Data Bank (PDB) • Ele
Page 20 and 21: Large Structural Changes Example:
Page 22 and 23: Large Structural Changes: Allostery
Page 24 and 25: Important mode in HIV-1 RT p66 thum