Analysis of sequence data in the cancer genome project

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Mutation Surveyor • Disadvantages Sensitivity homozygous variants heterozygous insdels Intensity information lost ( Overloaded) Inflexible
Mutation Surveyor • Disadvantages Sensitivity homozygous variants heterozygous insdels
Page 1 and 2: Analysis of sequence data in the ca
Page 3 and 4: Use the human genome sequence and h
Page 5 and 6: 518 Genes 10,000 STS’s CGP Set of
Page 7 and 8: •High-throughput mutation detecti
Page 9 and 10: Mutation detection of small intrage
Page 11 and 12: PCR protocol __55bp__ __55bp__ •A
Page 13 and 14: PCR protocol __55bp__ __55bp__ ____
Page 15 and 16: BLAT •Phred basecalls AB1/SCF fil
Page 17 and 18: Advantages BLAT •Simultaneous ana
Page 19 and 20: Mutation Surveyor
Page 23: Mutation Surveyor • Advantages Qu
Page 31 and 32: Del 3bp
Page 33 and 34: Del 3bp
Page 35 and 36: Auto-CSA (Excel) Automated-comparat
Page 37 and 38: CSA
Page 39 and 40: oncoCSA (Pearl/JAVA) •Use Genesca
Page 41: Analysis workflow Lab Reruns Files
Page 51 and 52: CSA development oncoCSA SUMMARY •

Analysis of sequence data in the cancer genome project

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