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1 Case-control study of of BCG vaccination and leprosy. 2 Case ...

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<strong>Case</strong>-<strong>control</strong> <strong>study</strong> <strong>of</strong> renal cancer <strong>and</strong> trichorehtene 1<br />

1 <strong>Case</strong>-<strong>control</strong> <strong>study</strong> <strong>of</strong> <strong>of</strong> <strong>BCG</strong> <strong>vaccination</strong> <strong>and</strong> <strong>leprosy</strong>.<br />

New cases <strong>of</strong> <strong>leprosy</strong> were examined for presence or absence <strong>of</strong> the <strong>BCG</strong> scar. During the same<br />

period, a 100% survey <strong>of</strong> the population <strong>of</strong> this area, which included examination for <strong>BCG</strong> scar,<br />

had been carried out.<br />

The tabulated data refer only to subjects under 35, because <strong>vaccination</strong> was not widely available<br />

when older persons were children.<br />

A r<strong>and</strong>om smaple <strong>of</strong> 1000 <strong>control</strong>s was sampled, <strong>and</strong> their status is given in the last column:<br />

<strong>BCG</strong> scar Leprosy cases Population survey Sampled <strong>control</strong>s<br />

Present 101 46 028 554<br />

Absent 159 34 594 446<br />

1. Calculate the odd-ratio <strong>of</strong> <strong>leprosy</strong> between persons with <strong>and</strong> persons without <strong>BCG</strong>-scar.<br />

2. Open bcg-1.sas in the program editor <strong>and</strong> do the analysis using the total population as<br />

<strong>control</strong>s.<br />

3. Change the number <strong>of</strong> <strong>control</strong>s in the datalines comm<strong>and</strong> (highlighted in yellow) so they<br />

refer to the sampled dataset.<br />

How does the odds-ratio, <strong>and</strong> the log-odds-ratio <strong>and</strong> its st<strong>and</strong>ard error change<br />

2 <strong>Case</strong>-<strong>control</strong> <strong>study</strong> <strong>of</strong> <strong>of</strong> <strong>BCG</strong> <strong>vaccination</strong> <strong>and</strong> <strong>leprosy</strong>. (2)<br />

1. Open bcg-2.sas in the program editor <strong>and</strong> do an age-stratified analysis using the total<br />

population as <strong>control</strong>s, table 18.1, p. 175. Make sure you find the results from Clayton &<br />

Hills in exc. 18.3, p. 178.<br />

2. Change the number <strong>of</strong> <strong>control</strong>s in the datalines comm<strong>and</strong> (highlighted in yellow) so they<br />

refer to simulated dataset ( table 18.2, p. 179), <strong>and</strong> do the stratified analysis.<br />

How does the estimate <strong>of</strong> the OR <strong>and</strong> the confidence interval change<br />

3. Change the number <strong>of</strong> <strong>control</strong>s in the datalines comm<strong>and</strong> (highlighted in yellow) so they<br />

refer to matched dataset ( table 18.3, p. 179), <strong>and</strong> do the stratified analysis.<br />

How does the estimate <strong>of</strong> the OR <strong>and</strong> the confidence interval change<br />

3 <strong>Case</strong>-<strong>control</strong> <strong>study</strong> <strong>of</strong> renal cancer <strong>and</strong> trichorehtene<br />

Vamvakas et al.: Renal cell cancer correlated with occupational exposure to trichlorethe. J Cancer<br />

Res Clin Oncol, 1998, pp 374–382.<br />

The paper is available at the course homepage as http://www.pubhealth.ku.dk/~bxc/Epi.<br />

2007/Vamvakas.1998.pdf<br />

We will discuss the following points based on the papaer:<br />

1. What is the primary aim <strong>of</strong> the <strong>study</strong><br />

2. How were the cases sampled


2 Epidemiology, autumn 2011<br />

3. How were the <strong>control</strong>s sampled<br />

4. Are they comparable; i.e. what assumptions are needed<br />

5. What is the (actual) <strong>study</strong> base<br />

6. What <strong>study</strong> base is the intended (for generalization)<br />

7. Is the sampling scheme incidence density sampling<br />

8. Can the age-effect on the occurrence <strong>of</strong> renal cancer be estimated<br />

9. Is age a confounder<br />

10. What is the main result (in plain words)<br />

11. Key in the numbers in table 6 (p.380), <strong>and</strong> verify the analysis using SAS proc freq. In<br />

particular, how does the odds-ratio estimate given by Vamvakas et al. compare the the<br />

Mantael-Haenszel estimate based on the same data

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