1 Case-control study of of BCG vaccination and leprosy. 2 Case ...
1 Case-control study of of BCG vaccination and leprosy. 2 Case ...
1 Case-control study of of BCG vaccination and leprosy. 2 Case ...
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<strong>Case</strong>-<strong>control</strong> <strong>study</strong> <strong>of</strong> renal cancer <strong>and</strong> trichorehtene 1<br />
1 <strong>Case</strong>-<strong>control</strong> <strong>study</strong> <strong>of</strong> <strong>of</strong> <strong>BCG</strong> <strong>vaccination</strong> <strong>and</strong> <strong>leprosy</strong>.<br />
New cases <strong>of</strong> <strong>leprosy</strong> were examined for presence or absence <strong>of</strong> the <strong>BCG</strong> scar. During the same<br />
period, a 100% survey <strong>of</strong> the population <strong>of</strong> this area, which included examination for <strong>BCG</strong> scar,<br />
had been carried out.<br />
The tabulated data refer only to subjects under 35, because <strong>vaccination</strong> was not widely available<br />
when older persons were children.<br />
A r<strong>and</strong>om smaple <strong>of</strong> 1000 <strong>control</strong>s was sampled, <strong>and</strong> their status is given in the last column:<br />
<strong>BCG</strong> scar Leprosy cases Population survey Sampled <strong>control</strong>s<br />
Present 101 46 028 554<br />
Absent 159 34 594 446<br />
1. Calculate the odd-ratio <strong>of</strong> <strong>leprosy</strong> between persons with <strong>and</strong> persons without <strong>BCG</strong>-scar.<br />
2. Open bcg-1.sas in the program editor <strong>and</strong> do the analysis using the total population as<br />
<strong>control</strong>s.<br />
3. Change the number <strong>of</strong> <strong>control</strong>s in the datalines comm<strong>and</strong> (highlighted in yellow) so they<br />
refer to the sampled dataset.<br />
How does the odds-ratio, <strong>and</strong> the log-odds-ratio <strong>and</strong> its st<strong>and</strong>ard error change<br />
2 <strong>Case</strong>-<strong>control</strong> <strong>study</strong> <strong>of</strong> <strong>of</strong> <strong>BCG</strong> <strong>vaccination</strong> <strong>and</strong> <strong>leprosy</strong>. (2)<br />
1. Open bcg-2.sas in the program editor <strong>and</strong> do an age-stratified analysis using the total<br />
population as <strong>control</strong>s, table 18.1, p. 175. Make sure you find the results from Clayton &<br />
Hills in exc. 18.3, p. 178.<br />
2. Change the number <strong>of</strong> <strong>control</strong>s in the datalines comm<strong>and</strong> (highlighted in yellow) so they<br />
refer to simulated dataset ( table 18.2, p. 179), <strong>and</strong> do the stratified analysis.<br />
How does the estimate <strong>of</strong> the OR <strong>and</strong> the confidence interval change<br />
3. Change the number <strong>of</strong> <strong>control</strong>s in the datalines comm<strong>and</strong> (highlighted in yellow) so they<br />
refer to matched dataset ( table 18.3, p. 179), <strong>and</strong> do the stratified analysis.<br />
How does the estimate <strong>of</strong> the OR <strong>and</strong> the confidence interval change<br />
3 <strong>Case</strong>-<strong>control</strong> <strong>study</strong> <strong>of</strong> renal cancer <strong>and</strong> trichorehtene<br />
Vamvakas et al.: Renal cell cancer correlated with occupational exposure to trichlorethe. J Cancer<br />
Res Clin Oncol, 1998, pp 374–382.<br />
The paper is available at the course homepage as http://www.pubhealth.ku.dk/~bxc/Epi.<br />
2007/Vamvakas.1998.pdf<br />
We will discuss the following points based on the papaer:<br />
1. What is the primary aim <strong>of</strong> the <strong>study</strong><br />
2. How were the cases sampled
2 Epidemiology, autumn 2011<br />
3. How were the <strong>control</strong>s sampled<br />
4. Are they comparable; i.e. what assumptions are needed<br />
5. What is the (actual) <strong>study</strong> base<br />
6. What <strong>study</strong> base is the intended (for generalization)<br />
7. Is the sampling scheme incidence density sampling<br />
8. Can the age-effect on the occurrence <strong>of</strong> renal cancer be estimated<br />
9. Is age a confounder<br />
10. What is the main result (in plain words)<br />
11. Key in the numbers in table 6 (p.380), <strong>and</strong> verify the analysis using SAS proc freq. In<br />
particular, how does the odds-ratio estimate given by Vamvakas et al. compare the the<br />
Mantael-Haenszel estimate based on the same data