Hwan Su Yoon - Bigelow Laboratory for Ocean Sciences
Hwan Su Yoon - Bigelow Laboratory for Ocean Sciences
Hwan Su Yoon - Bigelow Laboratory for Ocean Sciences
You also want an ePaper? Increase the reach of your titles
YUMPU automatically turns print PDFs into web optimized ePapers that Google loves.
<strong>Hwan</strong> <strong>Su</strong><strong>Yoon</strong> CV 1<br />
<strong>Hwan</strong> <strong>Su</strong> <strong>Yoon</strong><br />
Senior Research Scientist<br />
<strong>Bigelow</strong> <strong>Laboratory</strong> <strong>for</strong> <strong>Ocean</strong> <strong>Sciences</strong><br />
P.O. Box 475<br />
180 McKown Point Road<br />
West Boothbay Harbor, ME 04575, U.S.A.<br />
Tel: 207-633-9600; Fax: 207-633-9641<br />
E-mail: hsyoon@bigelow.org, hwansu@gmail.com<br />
Education:<br />
1994 – 1999 Ph.D. Botany, Chungnam National University, Korea.<br />
Molecular phylogenetic relationships of the Alariaceae and Laminariaceae<br />
(Phaeophyta).<br />
1992 – 1994 M.S. Biology, Chungnam National University, Korea.<br />
Morphology, hybridization and systematics of Ceramium kondoi<br />
(Ceramiaceae, Rhodophyta).<br />
1988 – 1992 B.S. Biology, Chungnam National University, Korea.<br />
Honor thesis, Morphology and karyotype of Convallaria majalis (Liliaceae)<br />
in Korea.<br />
Professional Positions and Academic Experiences:<br />
2007–present Senior Research Scientist: <strong>Bigelow</strong> <strong>Laboratory</strong> <strong>for</strong> <strong>Ocean</strong> <strong>Sciences</strong>.<br />
2004–2007 Senior Scientist: University of Iowa, Assembling the tree of eukaryotic<br />
microbial diversity, NSF.<br />
2001–2004 Post Doctoral Fellow: University of Iowa, Secondary symbiotic origin of<br />
algal plastids and the phylogeny of the Bangiophycidae (Rhodophyta), NSF.<br />
2000–2001 Post Doctoral Fellow: University of Iowa, The origin of algal plastids and<br />
Gracilaria plastid genomics (Rhodophyta), KOSEF.<br />
2000–2000 Lecturer: Chungnam National University, Experimental Plant Systematics.<br />
1995–1998 Teaching Assistant: Chungnam National University, Experimental Plant<br />
Systematics, Experimental Phycology, Introduction of Biology.<br />
Honors/Awards:<br />
2000 Korean Science and Engineering Foundation (KOSEF), Postdoctoral Fellow<br />
with Dr. Debashish Bhattacharya, University of Iowa, USA.<br />
1999 Korean Science and Engineering Foundation (KOSEF), Intern Researcher<br />
Fellow (= Postdoctoral Fellow) with Dr. <strong>Su</strong>ng Min Boo, Chungnam National<br />
University, Korea.
<strong>Hwan</strong> <strong>Su</strong><strong>Yoon</strong> CV 2<br />
Professional Activities:<br />
Member: Society <strong>for</strong> Molecular Biology and Evolution, Phycological Society of America,<br />
International Phycological Society, Korean Society of Phycology.<br />
Reviewer: Molecular Phylogenetics and Evolution, The Journal of Phycology, Phycologia,<br />
The Journal of Eukaryotic Microbiology, BMC Evolutionary Biology, Algae.<br />
Committee Member: Election committee of Phycological Society of America (2008-2010).<br />
Invited Speaker:<br />
2008 School of Marine <strong>Sciences</strong> Seminar Series, University of Maine, Orono,<br />
Maine, USA. <strong>Hwan</strong> <strong>Su</strong> <strong>Yoon</strong>. Plastid evolution and a recent plastid<br />
endosymbiosis in Paulinella chromatophora<br />
2007 Café Scientifique, Boothbay Harbor area public lecture. Boothbay Harbor,<br />
Maine, USA. <strong>Hwan</strong> <strong>Su</strong> <strong>Yoon</strong>. Evolution of plastids, the photosynthetic<br />
organelles<br />
2007 Workshop, Single cell alternatives to metagenomics in environmental<br />
microbiology, Boothbay Harbor, Maine, USA. <strong>Hwan</strong> <strong>Su</strong> <strong>Yoon</strong>. Evolution of<br />
microbial endosymbiosis.<br />
2007 19 th International Seaweed Symposium, Kobe, Japan. Ga Yeon Cho, <strong>Hwan</strong><br />
<strong>Su</strong> <strong>Yoon</strong>, Debashish Bhattacharya, Nina G. Klochkova, and <strong>Su</strong>ng Min Boo.<br />
Molecular systematics and evolution of kelp (Laminariales).<br />
2006 The International Conference on Marine Algae and Global Warming, The<br />
Korean Phycological Society, The National Assembly and Ministry of Marine<br />
Affaires of The Republic of Korea, Seoul, Korea. <strong>Hwan</strong> <strong>Su</strong> <strong>Yoon</strong> and<br />
Debashish Bhattacharya. Plastid evolution in chlorophyll c-containing algae.<br />
2005 The Society of Molecular Biology and Evolution 2005 Conference, Auckland,<br />
New Zealand. <strong>Hwan</strong> <strong>Su</strong> <strong>Yoon</strong>, Jeremiah D. Hackett, and Debashish<br />
Bhattacharya. Eukaryotic plastid endosymbiosis.<br />
Publications<br />
Journal Articles: (Times Cited - more than 50 in Google Scholar at 05/05/2008)<br />
1. <strong>Hwan</strong> <strong>Su</strong> <strong>Yoon</strong>*, Jessica Grant*, Yonas I. Tekle, Min Wu, Benjamin C. Chaon, Jeffrey<br />
C. Cole, John M. Logsdon Jr., David J. Patterson, Debashish Bhattacharya, & Laura A.<br />
Katz. 2008. Broadly Sampled Multigene Trees of Eukaryotes. BMC Evolutionary<br />
Biology 8:14. (*equal contribution by authors).<br />
2. Jeremiah D. Hackett*, <strong>Hwan</strong> <strong>Su</strong> <strong>Yoon</strong>*, Shenglan Li, Adrian Reyes-Prieto, <strong>Su</strong>sanne E.<br />
Rümmele, and Debashish Bhattacharya. 2007. Phylogenomic analysis supports the<br />
association of “Rhizaria” with chromalveolates and the monophyly of cryptophytes and<br />
haptophytes. Molecular Biology and Evolution 24:1702-1713 (*equal contribution by<br />
authors).<br />
3. <strong>Hwan</strong> <strong>Su</strong> <strong>Yoon</strong>, Claudia Ciniglia, Min Wu , Josep Comeron, Gabriele Pinto, Antonino<br />
Pollio, and Debashish Bhattacharya. 2006. Establishment endolithic populations of<br />
extremophilic Cyanidiales (Rhodophyta). BMC Evolutionary Biology 6:78.
<strong>Hwan</strong> <strong>Su</strong><strong>Yoon</strong> CV 3<br />
4. <strong>Hwan</strong> <strong>Su</strong> <strong>Yoon</strong>, Adrian Reyes-Prieto, Michael Melkonian, and Debashsh Bhattacharya.<br />
2006. Minimal plastid genome evolution in the Paulinella endosymbiont. Current<br />
Biology 16:R670-R672. (also see commentary article in same issue).<br />
5. <strong>Hwan</strong> <strong>Su</strong> <strong>Yoon</strong>, Jeremiah D. Hackett and Debashish Bhattacharya. 2006. A genomic<br />
and phylogenetic perspective on endosymbiosis and algal origin. Journal of Applied<br />
Phycology. 18: 475-481.<br />
6. <strong>Hwan</strong> <strong>Su</strong> <strong>Yoon</strong>, Kirsten M. Müller, Robert G. Sheath, Franklyn D. Ott, and Debashish<br />
Bhattacharya. 2006. Defining the major lineages of red algae (Rhodophyta). Journal of<br />
Phycology 42: 482-492.<br />
7. Adrian Reyes-Prieto, <strong>Hwan</strong> <strong>Su</strong> <strong>Yoon</strong> and Debashish Bhattacharya. 2006.<br />
Phylogenomics and its Growing Impact on Algal Phylogeny and Evolution. Algae 21: 1-<br />
10.<br />
8. Jeremiah D. Hackett, Todd E. Scheetz, <strong>Hwan</strong> <strong>Su</strong> <strong>Yoon</strong>, Marcelo B. Soares, Maria F.<br />
Bonaldo, Thomas L. Casavant and Debashish Bhattacharya. 2005. Insights into a<br />
dinoflagellate genome through expressed sequence tag analysis. BMC Genomics 6: 80.<br />
9. <strong>Hwan</strong> <strong>Su</strong> <strong>Yoon</strong>, Jeremiah D. Hackett, Kristy B. Lidie, Frances M. Van Dolah, Tetyana<br />
Nosenko, and Debashish Bhattacharya. 2005. Tertiary endosymbiosis driven genome<br />
evolution in dinoflagellate algae. Molecular Biology and Evolution 22: 1299-1308.<br />
10. Claudia Ciniglia*, <strong>Hwan</strong> <strong>Su</strong> <strong>Yoon</strong>*, Antonino Pollio, Gabrielle Pinto, Debashish<br />
Bhattacharya. 2004. Hidden biodiversity of the extremophilic Cyanidiales red algae.<br />
Molecular Ecology 13: 1827-1838 (*equal contribution by authors).<br />
11. <strong>Hwan</strong> <strong>Su</strong> <strong>Yoon</strong>, Jeremiah D. Hackett, Claudia Ciniglia, Gabrielle Pinto, Debashish<br />
Bhattacharya. 2004. A timeline <strong>for</strong> the origin of photosynthetic eukaryotes. Molecular<br />
Biology and Evolution 21: 809-818. Times Cited: 132.<br />
12. Jeremiah D. Hackett, <strong>Hwan</strong> <strong>Su</strong> <strong>Yoon</strong>, Bento M. Soares, Maria F. Bonaldo, Thomas L.<br />
Casavant, Todd L. Sheetz, Tetyana Nozenko, Debashish Bhattacharya. 2004. Migration<br />
of the plastid genome to the nucleus in a peridinin Dinoflagellate. Current Biology 14:<br />
213-218. Times Cited: 69.<br />
13. Debashish Bhattacharya, <strong>Hwan</strong> <strong>Su</strong> <strong>Yoon</strong>, and Jeremiah D. Hackett. 2004.<br />
Photosynthetic eukaryotes unite: Endosymbiosis connects the Dots. BioEssays 26.1: 50-<br />
60. Times Cited: 93.<br />
14. Tae Oh Cho, Ga Yeon Cho, <strong>Hwan</strong> <strong>Su</strong> <strong>Yoon</strong>, <strong>Su</strong>ng Min Boo, and Wook Jae Lee. 2003.<br />
New records of Myelophycus cavus (Scytosiphonaceae, Phaeophyceae) in Korea and the<br />
taxonomic position of the genus on the basis of a plastid DNA phylogeny. Nova<br />
Hedwigia 76: 381-397.<br />
15. Gabriele Pinto, Patrizia Albertano, Claudia Ciniglia, Salvatore Cozzolino, Antonino<br />
Pollio, <strong>Hwan</strong> <strong>Su</strong> <strong>Yoon</strong>, Debashish Bhattacharya. 2003. Comparative approaches to the<br />
taxonomy of the genus Galdieria Merola (Cyanidiales, Rhodophyta). Cryptogamie<br />
Algologie 24: 13-32.<br />
16. Kyung <strong>Su</strong>k Seo, Tae Oh Cho, Ji <strong>Su</strong>n Park, Eun Chan Yang, <strong>Hwan</strong> <strong>Su</strong> <strong>Yoon</strong>, and <strong>Su</strong>ng<br />
Min Boo. 2003. Morphology, basiphyte range, and plastid DNA phylogeny of<br />
Campylaephora borealis stat. nov. (Ceramiaceae, Rhodophyta). Taxon 52: 9-19.
<strong>Hwan</strong> <strong>Su</strong><strong>Yoon</strong> CV 4<br />
17. Jeremiah D. Hackett, Lucie Maranda, <strong>Hwan</strong> <strong>Su</strong> <strong>Yoon</strong> and Debashish Bhattacharya.<br />
2003. Phylogenetic evidence <strong>for</strong> the cryptophyte origin of the plastid of Dinophysis<br />
(Dinophysiales, Dinophyceae). Journal of Phycology 39: 440-448.<br />
18. <strong>Hwan</strong> <strong>Su</strong> <strong>Yoon</strong>, Jeremiah Hackett, Gabriele Pinto, and Debashish Bhattacharya. 2002.<br />
The single, ancient origin of Chromist plastids. Proceedings of the National Academy of<br />
<strong>Sciences</strong> of the United States of America 99(24): 15507-15512. (cover photo). Times<br />
Cited: 134.<br />
19. <strong>Hwan</strong> <strong>Su</strong> <strong>Yoon</strong>, Jeremiah D. Hackett, and Debashish Bhattacharya. 2002. A single<br />
origin of the peridinin-, and fucoxanthin-containing plastids in dinoflagellates through<br />
tertiary endosymbiosis. Proceedings of the National Academy of <strong>Sciences</strong> of the United<br />
States of America 99(18): 11724-11729. (also see commentary article in same issue).<br />
Times Cited: 85.<br />
20. <strong>Hwan</strong> <strong>Su</strong> <strong>Yoon</strong>, Ju Yeon Lee, <strong>Su</strong>ng Min Boo, and Debashish Bhattacharya. 2001.<br />
Phylogeny of Alariaceae, Laminariaceae and Lessoniaceae (Phaeophyta) based on<br />
plastid-encoded RuBisCo spacer and nuclear-encoded ITS sequence comparisons.<br />
Molecular Phylogenetics and Evolution 21(2): 231-243.<br />
21. Ga Youn Cho, <strong>Hwan</strong> <strong>Su</strong> <strong>Yoon</strong>, Han-Gu Choi, <strong>Su</strong>ng Min Boo, Kazuhiro Kogame. 2001.<br />
Phylogeny of the family Scytosiphonaceae (Phaeophyta) from Korea based on<br />
sequences of plastid-encoded RuBisCo spacer region. Algae 16(2): 145-150.<br />
22. <strong>Su</strong>ng Min Boo and <strong>Hwan</strong> <strong>Su</strong> <strong>Yoon</strong>. 2000. Molecular relationships of giant kelp<br />
(Phaeophyceae). Algae 15: 13-16.<br />
23. <strong>Hwan</strong> <strong>Su</strong> <strong>Yoon</strong> and <strong>Su</strong>ng Min Boo. 1999. Phylogeny of Alariaceae (Phaeophyta) with<br />
special reference to Undaria based on sequences of the RuBisCo spacer region.<br />
Hydrobiologia 398/399: 47-55.<br />
24. Yun Kyung Lee, <strong>Hwan</strong> <strong>Su</strong> <strong>Yoon</strong>, Taizo Motomura, Yung Jin Kim and <strong>Su</strong>ng Min Boo.<br />
1999. Phylogenetic relationships between Pelvetia and Pelvetiopsis (Fucaceae,<br />
Phaeophyta) inferred from sequences of the RuBisCo spacer region. European Journal<br />
of Phycology 34: 205-211.<br />
25. <strong>Su</strong>ng Min Boo, Wook Jae Lee, <strong>Hwan</strong> <strong>Su</strong> <strong>Yoon</strong>, Atsushi Kato and Hiroshi Kawai. 1999.<br />
Molecular phylogeny of Laminariales (Phaeophytceae) inferred from small subunit<br />
ribosomal DNA sequences. Phycological Research 47(2): 109-114.<br />
26. <strong>Hwan</strong> <strong>Su</strong> <strong>Yoon</strong>, Byeong Mee Min, Jae Wook Bang and <strong>Su</strong>ng Min Boo. 1999.<br />
Morphology and karyotype of Convallaria majalis (Liliaceae) in Korea. Korean Journal<br />
of Environmental Biology 17 (3): 371-378.<br />
27. Wook Jae Lee, <strong>Hwan</strong> <strong>Su</strong> <strong>Yoon</strong> and <strong>Su</strong>ng Min Boo. 1998. Phylogenetic relationships of<br />
Pelvetia and Pelvetiopsis (Phaeophyceae) based on small subunit ribosomal DNA<br />
sequences. Journal of Plant Biology 41(2): 103-109.<br />
28. Wook Jae Lee, <strong>Hwan</strong> <strong>Su</strong> <strong>Yoon</strong> and <strong>Su</strong>ng Min Boo. 1997. Marine algal community of<br />
Gyoungkiman Islets on the West Sea of Korea. Algae 12(2): 139-144.<br />
29. Kim, <strong>Su</strong>n Ran, <strong>Hwan</strong> <strong>Su</strong> <strong>Yoon</strong>, <strong>Su</strong>ng Min Boo and Sang Gi Paik. 1997. Morphological<br />
and random amplified polymorphic DNA features in populations of Ceramium kondoi<br />
(Rhodophyta). Journal of Plant Biology 40(1): 27-32.
<strong>Hwan</strong> <strong>Su</strong><strong>Yoon</strong> CV 5<br />
30. <strong>Su</strong>ng Min Boo and <strong>Hwan</strong> <strong>Su</strong> <strong>Yoon</strong>. 1993. Systematic studies of Ceramium kondoi<br />
(Ceramiaceae, Rhodophyta) in the field and in culture. Algae 8(2): 179-189.<br />
Book chapter:<br />
1. Jeremiah D. Hackett, <strong>Hwan</strong> <strong>Su</strong> <strong>Yoon</strong>, Nicholas J. Butterfield, Michael J. Sanderson,<br />
and Debashish Bhattacharya. 2007. Plastid endosymbiosis: sources and timing of the<br />
major events. In: Evolution of Primary Producers in the Sea, (Eds.) P. Falkowski and A.<br />
Knoll. Elsevier Academic Press. 109-133.<br />
2. Reyes-Prieto, A., H.S. <strong>Yoon</strong>, and D. Bhattacharya. Provisionally accepted. Marine<br />
protist (algal) genomics and evolution. In: Encyclopedia of Life <strong>Sciences</strong>. John Wiley &<br />
Sons, Ltd.<br />
3. <strong>Hwan</strong> <strong>Su</strong> <strong>Yoon</strong>, Giuseppe C. Zuccarello, and Debashish Bhattacharya. Provisionally<br />
accepted. Evolutionary history and taxonomy of red algae. In: Thermo-Acidophilic and<br />
Mesophilic Red algae in genomic age, (Eds.) J. Seckbach, D. J. Chapman and A. Weber.<br />
Kluwer Academic Publisher.<br />
Public interests:<br />
<strong>Hwan</strong> <strong>Su</strong> <strong>Yoon</strong>, Adrian Reyes-Prieto, Michael Melkonian, and Debashsh Bhattacharya.<br />
2006. Minimal plastid genome evolution in the Paulinella endosymbiont. Current<br />
Biology 16:R670-R672.<br />
• Commentary on this paper: Curr Biol. 2006 Sep 5;16(17):R670-2<br />
• Scientific American.com (Sep. 5, 2006):<br />
http://www.sciam.com/directory.cfm?chanID=sa006&dirID=6<br />
• TerraDaily.com (Sep. 6, 2006):<br />
http://www.terradaily.com/reports/Embosymbiont_Offers_Clues_To_How_Pl<br />
ants_Came_To_Be_999.html<br />
• ScienceDaily.com (Sep. 16, 2006):<br />
http://www.sciencedaily.com/releases/2006/09/060915205033.htm<br />
• BRIC (Biological Research In<strong>for</strong>mation Center) interview (Sep. 21, 2006):<br />
http://bric.postech.ac.kr/trend/interview/0609/0609_5031.html (in Korean)<br />
• Sciencewriter.org, My Top 10 Science Stories of 2006, # 3:<br />
http://sciencewriter.org/2006top10_03/<br />
• NeoFronteras.com (Sep. 15, 2006) - Spanish: http://neofronteras.com/?p=670<br />
• Osel.cz Objective Source E-Learning (Sep. 19. 2006) - the Czech Republic:<br />
http://www.osel.cz/index.php?obsah=6&akce=showall&clanek=2120&id_c=<br />
80805<br />
• Faz.net (Nov. 15, 2006) - Germany:<br />
http://www.faz.net/s/Rub80665A3C1FA14FB9967DBF46652868E9/Doc~EF<br />
5035DF5D8054D60B054EFDA4D9C50B3~ATpl~Ecommon~Scontent.html<br />
• Ghente.org (Sep. 11, 2006):<br />
http://www.ghente.org/clippings/clipping.php?Chave=2288<br />
• Aprender.unb.br (Dec. 1, 2006) - Brazil:<br />
http://aprender.unb.br/mod/<strong>for</strong>um/discuss.php?d=21946
<strong>Hwan</strong> <strong>Su</strong><strong>Yoon</strong> CV 6<br />
• Molecularlab.it (Sep. 11, 2006) – Italy:<br />
http://www.molecularlab.it/news/view.asp?n=4351<br />
• krasnova.info – Russia: http://www.krasnova.info/razdel159.html<br />
<strong>Hwan</strong> <strong>Su</strong> <strong>Yoon</strong>, Kirsten M. Müller, Robert G. Sheath, Franklyn D. Ott, and Debashish<br />
Bhattacharya. 2006. Defining the major lineages of red algae (Rhodophyta). Journal<br />
of Phycology 42: 482-492.<br />
• Wikipedia, Red algal classification system:<br />
http://en.wikipedia.org/wiki/Rhodophyta<br />
<strong>Hwan</strong> <strong>Su</strong> <strong>Yoon</strong>, Jeremiah Hackett, Gabriele Pinto, and Debashish Bhattacharya. 2002. The<br />
single, ancient origin of Chromist plastids. Proceedings of the National Academy of<br />
<strong>Sciences</strong> of the United States of America 99(24): 15507-15512.<br />
• Cover photo of this issue: http://www.pnas.org/content/vol99/issue24/cover.shtml<br />
<strong>Hwan</strong> <strong>Su</strong> <strong>Yoon</strong>, Jeremiah D. Hackett, and Debashish Bhattacharya. 2002. A single origin of<br />
the peridinin-, and fucoxanthin-containing plastids in dinoflagellates through tertiary<br />
endosymbiosis. Proceedings of the National Academy of <strong>Sciences</strong> of the United<br />
States of America 99(18): 11724-11729.<br />
• Commentary on this paper: http://www.pnas.org/cgi/content/extract/99/18/11558
Change language