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ACES II User manual version 2.7.0 (PDF) - Quantum Theory Project

ACES II User manual version 2.7.0 (PDF) - Quantum Theory Project

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6.7 FCMINT, FCM, FCMSCR, and FCMFINALFCMINT contains the full internal coordinate force constant matrix. The other files, FCM,FCMSCR, and FCMFINAL, correspond to the symmetrized, mass-weighted, and analytical forceconstant matrices, respectively. The example in Section 9.2.6 (page 88) shows how FCMINTcan be used to initialize the Hessian matrix in a geometry search.6.8 frequencyThis file is a simple ASC<strong>II</strong> free-format file that specifies the frequency or frequencies atwhich dynamic polarizabilities are computed.6.9 ISOMASSVibrational frequencies can be calculated with standard atomic masses or user-suppliedmasses—usually of isotopes. If a file named ISOMASS is found, then the vibrational frequencylogic in joda replaces the atomic masses with those found in the file. The content is freeformat ASC<strong>II</strong>, and the order of the masses must match the non-dummy centers in ZMAT.6.10 System files6.10.1 JOBARC, JAINDXThe JOBARC file stores records (named arrays) for the <strong>ACES</strong> <strong>II</strong> program system. Theaccompanying file JAINDX stores metadata about the records.6.10.2 MOINTS, GAMLAM, MOABCD, DERINT, DERGAMThese files store lists of double-precision arrays used by all of the post-SCF memberexecutables. They will be VERY large for big molecules and basis sets.6.10.3 MOL, <strong>II</strong><strong>II</strong>, <strong>II</strong>JJ, IJIJ, IJKLThe MOL file is created by xjoda and stores the molecular system and basis set informationused by xvmol and any AME that uses GAMESS integrals. The <strong>II</strong><strong>II</strong> file stores the oneelectronintegrals and all totally symmetric two-electron integrals in the AO basis. Thisfile will be very large for big basis sets. The other three files, <strong>II</strong>JJ, IJIJ, and IJKL storetwo-electron AO integrals that are not totally symmetric.23

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