Three-sphere low-Reynolds-number swimmer near a wall

PHYSICAL REVIEW E 80, 026308 2009Three-sphere low-Reynolds-number swimmer near a wallRojman Zargar, 1 Ali Najafi, 2, * and MirFaez Miri1,†1 Institute for Advanced Studies in Basic Sciences (IASBS), P.O. Box 45195-1159, Zanjan 45195, Iran2 Department of Physics, Zanjan University, Zanjan 313, IranReceived 11 February 2009; published 19 August 2009We study the influence of a wall on the dynamics of a low-Reynolds-number three-sphere swimmer. A farswimmer whose arm makes an angle with the horizon experiences the wall presence as an angle-dependentquadrupole force proportional to a/L 2 L/z 2 cos , where a, L, and z are the radius of spheres, the arm length,and the swimmer distance to the wall, respectively. The wall-induced translational velocity of swimmer isperpendicular to the arms. A far swimmer prefers to orient its arms parallel to the plate. This state is stable.Remarkably, the parallel state is unstable when the swimmer is close to the wall. In this regime, the velocity ofswimmer decreases as z/L 2 . Numerical solution of the equations of motion for arbitrary initial z/L and reveals four different phases of locomotion.DOI: 10.1103/PhysRevE.80.026308I. INTRODUCTIONDesign and fabrication of artificial molecular machinesare the subject of growing experimental and theoretical investigations1,2. Such machines with their ability to transport,mix, and sort materials are involved in biophysical andmicrofluidic applications 3. Smart nanocarriers can deliverand trigger the release of active agents in the cellular environments4. In microfluidic devices with their crucial applicationsin drug discovery 5, nanopumps and nanomotorsare the basic elements 6.A simple design of a nanomachine favors its realizationwith the currently available technologies. In nature, biologicalmicroorganisms, such as bacteria, have fascinatingmechanisms to swim at very low Reynolds number 7.Thus, biologically inspired propellers are the basic proposalfor locomotion in fluids.In his pioneering work, Taylor 8 modeled the microorganismpropulsion by a train of two-dimensional sinusoidalwaves traveling across an inextensible sheet. Purcell in hisseminal work proposed the simplest swimmer with two internaldegrees of freedom 9. The propulsion velocity ofPurcell’s three-link swimmer is calculated recently 10.Stroke patterns of this swimmer are optimized to achievemaximum efficiency 11. There are also many works devotedto microswimmers based on nonreciprocal deformations12,13, phoretic effects, and chemical reactions 14and linked magnetic beads controlled by an external magneticfield 15.A simple swimmer, which is a different geometrical versionof Purcell’s system, is introduced in Ref. 16. Theswimmer consists of a central sphere that is connected to twoother spheres with straight rods 17. The system moves byvarying the length of arms in a periodic but time irreversiblemanner. The three-sphere swimmer has attracted much attentionsince it captures almost the whole characteristics of alow-Reynolds-number propeller, and it consists of sphericalobjects whose hydrodynamic interactions are extensively*najafi@znu.ac.ir† miri@iasbs.ac.irPACS numbers: 47.15.G, 87.19.ru, 45.40.Lnstudied. N-sphere swimmers that can change both the lengthof their arms and the angle between them 18, mutual hydrodynamicinteractions between two three-sphere swimmer19, the role of noise and coherence in the stroke cycle 20,a conformation kinetic model to drive the deformation cycle21, and a swimmer with one of the spheres having a largerradius 22 are thoroughly studied. Recently, Leoni et al.experimentally realized the three-sphere low-Reynoldsnumberswimmer 23.Swimming in a geometrically confined environment is asubject of growing interest 24–29. A plethora of fascinatingphenomena emerges due to hydrodynamic interactions of theswimmer with solid surfaces. Even for a single sphere, thediffusion parallel to the wall is always bigger than the perpendiculardiffusion 30, which has been verified experimentally31. Experiments also show that microorganisms,e.g., E. coli 32, bull spermatozoa 33, and human spermatozoa34 swimming in confined geometries are attracted bysurfaces. Apparently, understanding the migration of infectiousbacteria along medically implanted surfaces such ascatheters and prostheses 35, the movement of bacteriathrough the pores of saturated soil 36, the migration ofbacteria through small-diameter capillary tubes 37 are important.In the realm of microfluidics, walls are expected tohave a profound effect on the motion of fluids and propellers.Inspired by the above-mentioned systems and in view ofdesigning a drug carrier moving in small-diameter capillaries,we study the mutual interaction between the three-spherelow-Reynolds-number swimmer and a rigid wall. The advantageof focusing on this model propeller is that hydrodynamicinteractions between a sphere and a wall and betweentwo spheres are known. Our study paves the way for understandinghydrodynamic interactions between a propeller andwalls of a channel of rectangular cross section. Our resultscan be examined by a simple extension of the recent experimentof Leoni et al.The rest of the paper is organized as follows. In Sec. II weintroduce the three-sphere swimmer near a wall. Section IIIis devoted to the formulation of the problem. The results oftwo different cases, where swimmer is far from and close tothe wall, are presented in Sec. IV. Concluding remarks aregiven in Sec. V.1539-3755/2009/802/0263087026308-1©2009 The American Physical Society

ZARGAR, NAJAFI, AND MIRIg^n ^th2a3II. MODEL: A THREE-SPHERE SWIMMERNEAR A WALLTo quantify the relative importance of the inertial andfrictional effects, Reynolds has introduced a dimensionlessnumber. The Reynolds number R in terms of typical lengthscale l, typical velocity v, fluid density , and fluid viscosity, which are characteristics of the flow, is R=vl/. For anartificial propeller swimming in water, l1–10 m, v1–10 m/s, 1000 kg/m 3 , and 10 −3 Pa s; thus,R10 −6 –10 −4 is quite low.Propulsive motion in the highly viscous conditions, wherethe viscous effects dominate over the inertia effects, is not atrivial task 9. Under these conditions, any swimmingmechanism should involve a nonreciprocal cyclic motion.The nonreciprocal motion breaks the time-reversal symmetryand is of prime importance in swimming.Figure 1 shows a schematic view of a simple three-sphereswimmer moving in a fluid medium bounded by a wall. Theswimmer consists of three spheres linked by two arms ofnegligible diameter. The length of arms denoted by ht andgt varies in a nonreciprocal manner to have a net displacement.We use the internal deformation space h,g to draw asimple picture of the possible swimming mechanisms. Anyclosed path in this space involves a sequence of body deformations,which propels the system. In particular, a simpleelliptic path in this space is a periodic variation in the armlengths, with a constant phase difference between the deformationsof two arms.x i and ẋ i are the position vector and velocity of the ithsphere i=1,2,3, respectively, that characterize the spaceconfiguration and dynamical behavior of the three-spheresystem. Because of the symmetry considerations and with noloss of generality, we analyze the motion of swimmer in atwo-dimensional space x,z see Fig. 1. In the following,we first set up low-Reynolds-number hydrodynamic descriptionof the system and then solve the equations of motion.III. HYDRODYNAMIC INTERACTIONS BETWEENTHE SWIMMER AND WALLStokes equation describes the fluid motion at zero Reynoldsnumber. Denoting the fluid velocity field by ur, theh(t)θg(t)1 2FIG. 1. Color online Schematic view of a three-sphere swimmernear a wall. The unit vector tˆ shows the arm direction. Top left:an admissible nonreciprocal motion in the h,g space.zzxpressure by pr, and the force density acting on the fluid byfr, the Stokes equation reads as − 2 ur+pr=fr30. The conservation of mass for the incompressible fluidcan be expressed as ·ur=0. The velocity field is alsosubject to a no-slip boundary condition on rigid surfaces.One of the elementary solutions to the Stokes equation isthe velocity field of a point force fr=br−r 0 embeddedin the infinite space and this solution is called Stokeslet orOseen-Burgers tensor. The velocity field of the Stokeslet canbe written as ur=Gr−r 0 ·b, where the free space Green’sfunction of the Stokes equation reads asG F r − r 0 = 18 x+ x x x 3 , 1here x=r−r 0 and ,=1,2,3.In 1971, Blake obtained the velocity field due to a pointforce in the vicinity of a stationary plane boundary 38.Since the no-slip condition should be satisfied on the plane,the influence of the boundary on the flow is deep. Assumingthat the wall is located at z=0 and the point force resides inr 0 , the following form for the Green’s function can be writtenasG B r − r 0 = 18 xPHYSICAL REVIEW E 80, 026308 2009+2z 0 2 1−2 z + x x x 3 − R + R R R 3R 3 − 3R R R 5 −2z 0 1−2 z R zR 3 − R R 3 z + R R 3 z − 3R R R zR 5 . 2Here x=r−r 0 , z 0 =ẑ·r 0 , R=r−r i i0 , and r 0 represents the imagepoint of r 0 with respect to the wall.Let us assume that a collection of N spherical objects aremoving inside the fluid. We denote by f i the hydrodynamicforce acting on the ith sphere moving with velocity v i . Theforce and velocities of spheres obey the equationsNv i = M ij · f j ,3j=1where the mobility tensors M ij express the response of theith sphere to the force acting on the jth sphere. We can useFaxén’s theorem for spherical objects with radius a to expressthe mobility tensor in terms of the Green’s function ofStokes equation 30,39,M ij =1+ a26 r21+ a2i 6 r2G rji ,r j . 4If we assume that the radius a is smaller than the distancebetween spheres then M ij =G r i ,r j up to the second orderin a. It follows immediately that the Green’s functionG B r i ,r j introduced by Blake is the first approximation forthe mobility tensor of spheres moving in a fluid bounded bya wall.Another point to mention is the self-mobility of a spheremoving near a wall. Assuming that the distance z betweensphere and wall is greater than the sphere radius a, the componentsof self-mobility tensor are 30,39026308-2

ZARGAR, NAJAFI, AND MIRIOur work can be extended in many directions. Our resultscan be examined by a simple extension of the recent experimentof Leoni et al. 23. Swimming in a complex geometry,e.g., a microchannel of rectangular or circular cross section isof immediate interest. Inspired by the colonies of swimmingbacteria near biological membranes, we are investigatingmany propellers adjacent to a wall.APPENDIX: HYDRODYNAMIC MOBILITY TENSORSThe hydrodynamic mobility tensors appearing in Eq. 6areM xx ij = 11 R 38 1 r − 1 R + x i − x j 2 1 r 3 − 1 R 3 +2z j2− 3x i − x j 2R 5 −2z j z i + z j R 3− 3x i − x j 2 z i + z j R 5 ,M xz ij =8 1 x i − x j z i − z j r 3 − x i − x j z i + z j R 3+6z j2 x i − x j z i + z j R 5+2z j x i − x j R 3 − 3x i − x j z i + z j 2R 5 ,M zx ij =8 1 x i − x j z i − z j r 3 − x i − x j z i + z j R 3M zz ij = 1−6z j2 x i − x j z i + z j R 5+2z j x i − x j R 3 + 3x i − x j z i + z j 2R 5 ,r 3 − z i + z j 2R 3 −2z2 1 jR 38 1 r − 1 R + z i − z j 2 +2z j z i + z j − 3z i + z j 2R 5R 3 − 3z i + z j 3R 5 ,where r 2 =x i −x j 2 +z i −z j 2 and R 2 =x i −x j 2 +z i +z j 2 .We definePHYSICAL REVIEW E 80, 026308 2009S 1 = M 12 + M 21 − M 11 − M 22 ,S 2 = M 13 + M 21 − M 11 − M 23 ,S 3 = M 12 + M 31 − M 11 − M 32 ,S 4 = M 13 + M 31 − M 11 − M 33 .Now the matrix elements appearing in Eq. 11 can be introducedasa 11 = − cos S 1 xx − sin S 1 zx ,a 12 = − cos S 1 xz − sin S 1 zz ,a 13 = − cos S 2 xx − sin S 2 zx ,a 14 = − cos S 2 xz − sin S 2 zz ,a 21 = cos S 3 xx + sin S 3 zx ,a 22 = cos S 3 xz + sin S 3 zz ,a 23 = cos S 4 xx + sin S 4 zx ,a 24 = cos S 4 xz + sin S 4 zz ,a 31 = cos hS 1 zx + gS 3 zx − sin hS 1 xx + gS 3 xx ,a 32 = cos hS 1 zz + gS 3 zz − sin hS 1 xz + gS 3 xz ,a 33 = cos hS 2 zx + gS 4 zx − sin hS 2 xx + gS 4 xx ,a 34 = cos hS 2 zz + gS 4 zz − sin hS 2 xz + gS 4 xz ,a 41 = g sin ,a 42 =−g cos ,a 43 =−h sin ,a 44 = h cos .1 E. R. Kay, D. A. Leigh, and F. Zerbetto, Angew. Chem., Int.Ed. 46,722007; K. Kinbara and T. Aida, Chem. Rev. Washington,D.C. 105, 1377 2005.2 J. P. Sauvage and V. Amendola, Molecular Machines and MotorsSpringer-Verlag, Berlin, 2001.3 V. Balzani et al., Angew. Chem., Int. Ed. 39, 3348 2000.4 S. H. Kim, J. H. Jeong, S. H. Lee, S. W. Kim, and T. G. Park,J. Controlled Release 129, 107 2008.5 P. S. Dittrich and A. Manz, Nat. Rev. Drug Discovery 5, 2102006.6 H. Bruus, Theoretical Microfluidics Oxford University Press,Oxford, 2008.7 H. C. Berg, E. coli in Motion Springer, New York, 2004.8 G. Taylor, Proc. R. Soc. London, Ser. A 209, 447 1951.9 E. M. Purcell, Am. J. Phys. 45, 31977.10 L. E. Becker, S. A. Koehler, and H. A. Stone, J. Fluid Mech.490, 152003.11 D. Tam and A. E. Hosoi, Phys. Rev. Lett. 98, 068105 2007.12 J. E. Avron, O. Gat, and O. Kenneth, Phys. Rev. Lett. 93,186001 2004; J. E. Avron, O. Kenneth, and D. H. Oaknin,026308-6

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