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Curriculum Vitae in formato europeo - Università degli Studi di ...

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CURRICULUM VITAEPERSONAL INFORMATIONNameAddressGiordani IlariaVia Volturno 1322063 Cantù (Co)Mobile phone number (+ 39) 333.8725026Phone number (+ 39) 031.712957E-mailIlaria.giordani@<strong>di</strong>sco.unimib.itNationality ItalianPlace and date of birth Cantù (Co), 14.10.1981EDUCATION AND TRAINING• Date (from – to) October 2006 – November 2009• Name and type of organisation UNIVERSITY OF MILANO – BICOCCA, Milan, Italyprovid<strong>in</strong>g education and tra<strong>in</strong><strong>in</strong>g Department of Informatics, Systems and communication (DISCO)• Level <strong>in</strong> national or <strong>in</strong>ternationalclassification• Research <strong>in</strong>terestsPhd <strong>in</strong> computer scienceThe focus of my reseach is: Mach<strong>in</strong>e learn<strong>in</strong>g algorithms, with particolar attention on evolutionary programm<strong>in</strong>gtechniques, like genetic programm<strong>in</strong>g, applied on bio<strong>in</strong>formatic and biology doma<strong>in</strong>. Collaboration with physicians of two cl<strong>in</strong>ical <strong>in</strong>stitutes of Milan for recostruct<strong>in</strong>g a data basewith cl<strong>in</strong>ical, therapeutical and genomic data of patients under Oral Anticoagulation Therapy(OAT). Study and implementation of a relational cluster<strong>in</strong>g framework applied to <strong>di</strong>fferent life scienceproblems.Dur<strong>in</strong>g my phd stu<strong>di</strong>es I attended these courses: Summer school Secevita, a summer course on evolutionalry computation andevolutionary life. “Wireless Sensor Networks” at Università Milano-bicocca, DISCO (Department ofInformatics, Systems and Comunication). “Tecniche Evolutive Avanzate” at Università Milano-bicocca, DISCO (Department ofInformatics, Systems and Comunication) Soft Comput<strong>in</strong>g: Theory, Tecniques and Applications at Politecnico <strong>di</strong> Milano,Dipartimento <strong>di</strong> Elettronica e comunicazione Bayesian Filter<strong>in</strong>g at Università Milano-bicocca,DISCO (Department of Informatics,Systems and Comunication). Bayesian Networks at Università Milano-bicocca, DISCO (Department of Informatics,Systems and Comunication).• Date (from – to) December 2003 - April 2006• Name and type of organisationprovid<strong>in</strong>g education and tra<strong>in</strong><strong>in</strong>gUNIVERSITÀ DEGLI STUDI DI MILANO BICOCCADepartment of Informatics, Systems and Comunication (DISCO)Pag<strong>in</strong>a 1 - <strong>Curriculum</strong> vitae <strong>di</strong>Ilaria Giordani


• Pr<strong>in</strong>cipal subjects/occupationalskills covered• Level <strong>in</strong> national or <strong>in</strong>ternationalclassification• Thesis titleSupply cha<strong>in</strong> management , E.R.P. systems, decision models for e-commerce, creation andmanta<strong>in</strong>ance of web documents, control of software quality, Reverse Eng<strong>in</strong>eer<strong>in</strong>g, computerlanguagesMaster degree <strong>in</strong> computer science (110/110)“Analisi strutturale per la classificazione <strong>di</strong> pag<strong>in</strong>e web” (Structural analysis for web pagesclassification)• Date (from – to) September 2000 – December 2003• Name and type of organisation UNIVERSITY OF MILANO – BICOCCA, Milan, Italyprovid<strong>in</strong>g education and tra<strong>in</strong><strong>in</strong>g Department of Informatics, Systems and communication (DISCO)• Pr<strong>in</strong>cipal subjects/occupational Software Eng<strong>in</strong>eer<strong>in</strong>g, Data Bases, Images elaborationskills covered• Level <strong>in</strong> national or <strong>in</strong>ternational Bachelor degree <strong>in</strong> computer science (91/110)classification• Thesis title “Analisi delle coppie def<strong>in</strong>izione-uso nel software object-oriented ”.• Date (from – to) 1995 – 2000• Name and type of organisation Scientific High School Enrico Fermi – via Giovanni XXIII Cantù (CO)provid<strong>in</strong>g education and tra<strong>in</strong><strong>in</strong>g•Level <strong>in</strong> national or <strong>in</strong>ternational Upper Secondary School DiplomaclassificationWORK EXPERIENCE• Dates November 2007 – April 2008• Name and address of employer Consorzio Milano Ricerche (CMR)Via Cozzi 53, Milano• Type of bus<strong>in</strong>ess or sector A non-profit organisation (Consortium) established <strong>in</strong> 1986 to promote and manage researchand <strong>in</strong>novation through cooperative projects l<strong>in</strong>k<strong>in</strong>g universities, research centres, <strong>in</strong>dustrialcompanies and small and me<strong>di</strong>um-sized enterprises (SMEs).• Occupation or position held Collaboration <strong>in</strong> a research project• Ma<strong>in</strong> activities and responsibilities Design and implementation of a LIMS System (Laboratory Information Management System) : asofttware system used by laboratory to handle all the <strong>di</strong>fferent activities of a pharmaceuticalresearch center.• Dates October 2006 – October 2007• Name and address of employer Delos s.r.l - Sp<strong>in</strong>off of university Milano Bicoccavia Cozzi 5320125 Milano• Type of bus<strong>in</strong>ess or sector Bio<strong>in</strong>formatic research center• Occupation or position held Collaboration• Ma<strong>in</strong> activities and responsibilities software port<strong>in</strong>g (bio<strong>in</strong>formatic applications) from fortran 77/90 to C++ design and implementation of genetic programm<strong>in</strong>g algorithms with application on drugdesign application of <strong>di</strong>fferent mach<strong>in</strong>e learn<strong>in</strong>g techniques• Dates April 2006 – November 2006• Name and address of employer UNIVERSITY OF MILANO – BICOCCA, Milan, ItalyDepartment of Informatics, Systems and communication (DISCO)Pag<strong>in</strong>a 2 - <strong>Curriculum</strong> vitae <strong>di</strong>Ilaria Giordani


• Occupation or position held• Ma<strong>in</strong> activities and responsibilitiesCollaboration at research laboratory MIND (Models <strong>in</strong> decision mak<strong>in</strong>g) of DISCODesign and implementation of a web pages’ images and multime<strong>di</strong>al component search eng<strong>in</strong>e.IThe frame work, implemented <strong>in</strong> Java, has the follow<strong>in</strong>g pr<strong>in</strong>cipal functions: document spider<strong>in</strong>g (LAN or Internet) images and multime<strong>di</strong>a component <strong>in</strong>dex<strong>in</strong>g search<strong>in</strong>g of images and multime<strong>di</strong>a components and their <strong>in</strong>fromation• Dates September 2005 – April 2006• Name and address of employer Consorzio Milano Ricerche (CMR)Via Cozzi 53, Milano• Occupation or position held Stage• Ma<strong>in</strong> activities and responsibilities Dur<strong>in</strong>g the stage activity thesis work has been done.The tesi activity has been focalized on the analysis of web page structure and <strong>in</strong>formation. Inparticolar, <strong>di</strong>fferent k<strong>in</strong>d of <strong>in</strong>formation belong<strong>in</strong>g to the textual analysis of web pages has beencomb<strong>in</strong>ed us<strong>in</strong>g a visual layout analysis algorithm. Major attention has been focalized on thestudy of web pages’ images and on the text <strong>in</strong>herent to them.TEACHING ACTIVITY2009-20102008-20092007- 2008- Assistant to the cours of “Numerical methods for bio<strong>in</strong>formatics”, at BiotechnologyDepartment of University of Milano Bicocca- Assistant to the cours of “F<strong>in</strong>ancial systems analysis”, at Department of Informatics,Systems and Communication of University of Milano-Bicocca.- Tutor (FSE project) for the labouratory of Algorithms and Operation Research atDepartment of Informatics, Systems and Communication of University of Milano-Bicocca.- Tutor (e-learn<strong>in</strong>g ) for the labouratory of Algorithms and Operation Research atDepartment of Informatics, Systems and Communication of University of Milano-Bicocca.- Assistant to the cours of “Numerical methods for bio<strong>in</strong>formatics”, at BiotechnologyDepartment of University of Milano Bicocca- Tutor (FSE project) for the labouratory of Algorithms and Operation Research atDepartment of Informatics, Systems and Communication of University of Milano-Bicocca.- Tutor (e-learn<strong>in</strong>g ) for the labouratory of Algorithms and Operation Research atDepartment of Informatics, Systems and Communication of University of Milano-Bicocca.- Assistant to the cours of “Numerical methods for bio<strong>in</strong>formatics”, at BiotechnologyDepartment of University of Milano BicoccaSCIENTIFICPUBBLICATIONSPag<strong>in</strong>a 3 - <strong>Curriculum</strong> vitae <strong>di</strong>Ilaria Giordani


2010F. Archetti, I.Giordani, L. Vanneschi, “Genetic Programm<strong>in</strong>g for QSAR Investigation of Dock<strong>in</strong>gEnergy”, Applied Soft Comput<strong>in</strong>g, Vol. 10, No. 1, pp. 170-182, issn: 1568-4946, Jan 2010.F. Archetti, I.Giordani, L. Vanneschi, “Genetic Programm<strong>in</strong>g for Anticancer TherapeuticResponse Pre<strong>di</strong>ction us<strong>in</strong>g the NCI-60 Dataset”, Computers & Operations Research, Vol.37,No.8, pp.1395-1405, August 2010.D. Toscani, F. Bargna, L. Quarenghi, F. Archetti, I. Giordani, A software system for data<strong>in</strong>tegration and decision support for evaluation of air pollution health impact, to appear <strong>in</strong> theproceed<strong>in</strong>gs of the ICEIS conference, 8-12 June, Madeira, Pourtugal.2009G. Ogliari , I. Giordani, A. Mihalich, D. Castal<strong>di</strong>, A. Di blasio, A. Dub<strong>in</strong>i, E. Mess<strong>in</strong>a, F. Archetti,D. Mari, Nuova classificazione cl<strong>in</strong>ica e Farmacogenetica per pre<strong>di</strong>re la d<strong>in</strong>amica dell'<strong>in</strong>rnell'anziano <strong>in</strong> tao. Giornale <strong>di</strong> gerontologia, vol. lvii; p. 495-496, issn: 0017-0305, <strong>di</strong>cembre2009E. Fers<strong>in</strong>i, I.Giordani, E.Mess<strong>in</strong>a, F. Archetti, "Relational Cluster<strong>in</strong>g and Bayesian Networks forL<strong>in</strong>k<strong>in</strong>g Gene Expression Profiles and Drug Activity Patterns", International Workshop ofApplications of Mach<strong>in</strong>e Learn<strong>in</strong>g <strong>in</strong> Bio<strong>in</strong>formatics (satellite workshop of IEEE InternationalConference on Bio<strong>in</strong>formatics and Biome<strong>di</strong>c<strong>in</strong>e- BIBM-), novembre 2009F. Archetti, I. Giordani, E. Mess<strong>in</strong>a, G. Ogliari, D. Mari, "A comparison of data m<strong>in</strong><strong>in</strong>gapproaches <strong>in</strong> the categorization of oral anticoagulant patients", International Workshop ofApplications of Mach<strong>in</strong>e Learn<strong>in</strong>g <strong>in</strong> Bio<strong>in</strong>formatics (satellite workshop of IEEE InternationalConference on Bio<strong>in</strong>formatics and Biome<strong>di</strong>c<strong>in</strong>e- BIBM-), novembre 2009F. Archetti, I. Giordani, D. Mari, E. Mess<strong>in</strong>a, G. Ogliari, A” Markov based classification andtreatment of the anticoagulant patient”, AIRO 2009, Annual Conference of the Italian OperationsResearch Society, September, 2009F.Archetti, I.Giordani, G.Mauri, E.Mess<strong>in</strong>a. “A new cluster<strong>in</strong>g approach for learn<strong>in</strong>gtranscriptional regulatory modules”, Proceed<strong>in</strong>gs of BITS09, Sixth Annual Meet<strong>in</strong>g Bio<strong>in</strong>formaticItalian Society, March 18-20 2009 Genova, pp:76-77L. Vanneschi , F. Archetti, M. Castelli, I. Giordani, "Classification of Oncologic Data with GeneticProgramm<strong>in</strong>g," Journal of Artificial Evolution and Applications, vol. 2009, Article ID 848532, 13pages, 2009. doi:10.1155/2009/848532.F.Archetti, E.Fers<strong>in</strong>i, I. Giordani, C. Manfredotti, E. Mess<strong>in</strong>a, D. Toscani, In Emerg<strong>in</strong>g Para<strong>di</strong>gms<strong>in</strong> Informatics, Systems and Communication, Carlo Bat<strong>in</strong>i, Raimondo Schett<strong>in</strong>i e<strong>di</strong>tors,Dipartimento <strong>di</strong> Informatica Sistemistica e Comunicazione, Università <strong>di</strong> Milano Bicocca, 1giugno 20092008 F. Archetti, I. Giordani, D. Mari, E. Mess<strong>in</strong>a, G. Ogliari, Monitor<strong>in</strong>g the long term anticoagulantpatient: a system me<strong>di</strong>c<strong>in</strong>e approach, SysBioHealth Symposium, Bologna, 20082007F. Archetti, E. Fers<strong>in</strong>i, I.Giordani, G.Mauri, E.Mess<strong>in</strong>a, “Relational cluster<strong>in</strong>g <strong>in</strong> the <strong>in</strong>ference ofgenetic regulatory networks”, M<strong>in</strong>i EURO Conference on Computational Biology, Bio<strong>in</strong>formaticsand Me<strong>di</strong>c<strong>in</strong>e, September 2008F. Archetti, M. Castelli, I. Giordani, L. Vanneschi. “Classification of colon tumor tissues us<strong>in</strong>ggenetic programm<strong>in</strong>g”. Proceed<strong>in</strong>gs of the Annual Italian Workshop on Artificial Life andEvolutionary Computation (WIVACE 2008)"Pag<strong>in</strong>a 4 - <strong>Curriculum</strong> vitae <strong>di</strong>Ilaria Giordani


I. Giordani, L. Vanneschi, E. Fers<strong>in</strong>i. “Modell<strong>in</strong>g the Relationship between the Microarray Data ofthe NCI-60 Anticancer Dataset with Therapeutic Responses by Genetic Programm<strong>in</strong>g”.SysBioHealth Symposium (ISBN: 978-88-903154-0-4), 2007, « Young Investigator award»F. Archetti, P. Fantucci, I. Giordani, L. Vanneschi. “Dock<strong>in</strong>g Energy Assessment by Multi-CriteriaGenetic Programm<strong>in</strong>g”. AIRO 2007, XXXVIII Annual Conference of the Italian OperationsResearch Society, September, 2007Technical ReportE. Fers<strong>in</strong>i, I. Giordani, E. Mess<strong>in</strong>a, F. Archetti. “Web Page Classification us<strong>in</strong>g Semantic Image-Blocks”. Dipartimento <strong>di</strong> Informatica Sistemistica e Comunicazione, Università <strong>di</strong> Milano Bicocca,Research Report n.2, September 2007.AwardsYoung Investigator Award. SysBioHealth Symposium 2007, “Modell<strong>in</strong>g the Relationship betweenthe Microarray Data of the NCI-60 Anticancer Dataset with Therapeutic Responses by GeneticProgramm<strong>in</strong>g”.SKILLSMADRELINGUAOTHER LANGUGES• Lecture• Writ<strong>in</strong>g• Oral ExpressionITALIANEnglishGoodGoodGoodCAPACITÀ E COMPETENZETECNICHE Data M<strong>in</strong><strong>in</strong>g Techniques: theoretical and applied knowledge of data m<strong>in</strong><strong>in</strong>gtechniques for classification, cluster<strong>in</strong>g and probabilistic graphical models. Software development: experience <strong>in</strong> J2SE programm<strong>in</strong>g (Eclipse, Hibernate, Spr<strong>in</strong>g,Ant, Lucene, JDBC), knowledge of C, C++ Web applications development: Apache Tomcat. Relational databases: Oracle 10g and Microsoft Access Software eng<strong>in</strong>eer<strong>in</strong>g: good knowledge of user requirements collection, softwarearchitectures design, software development cycle and UML design Operat<strong>in</strong>g systems: wide experience on all the Microsoft Systems Office automation: very good knowledge of Microsoft Office suite. Specialized softwares: usage of scientific software for statistics, data m<strong>in</strong><strong>in</strong>g andsimulation (Matlab, Weka, SPSS)ORGANIZATIONAL SKILLSHOBBIESDRIVING LICENCEI’ m able to organize work <strong>in</strong>dependently, sett<strong>in</strong>g priorities and tak<strong>in</strong>g responsibility. I haveacquired this capability through the various professional experiences listed above <strong>in</strong> which it wasoften asked me to <strong>in</strong>dependently manage the various activities, accord<strong>in</strong>g to the deadl<strong>in</strong>es andgoals.Swim, underwater, sail<strong>in</strong>gItalian driv<strong>in</strong>g licence BSail<strong>in</strong>g driv<strong>in</strong>g licencePag<strong>in</strong>a 5 - <strong>Curriculum</strong> vitae <strong>di</strong>Ilaria GiordaniIn reference to the law 675/96 concern<strong>in</strong>g the process<strong>in</strong>g of personal data, I authorize theuse of my personal data for the purposes of selection and communication.

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