Community Ecology analysis using R: basic intro

Rarefaction(script http://www.jennajacobs.org/R/rarefaction.html)>source("http://www.jennajacobs.org/R/rarefaction.txt") #source thefunction from the website>rarefaction(ABUND_OTU_counts, subsample=1000, plot=TRUE,color=TRUE, error=FALSE, legend=TRUE, symbol) # needs OTUtable with counts and subsample sizePooled samplesThis can take a whileto run.Mean OTU Richness0 2000 60000 500 1500 25000 1,000,000 2,000,000 3,000,000 4,000,000 5,000,000Individual samples0 100,000 200,000 300,000 400,000 500,000Reads (iTags)