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Clinical Cancer Research<br />

Research Article<br />

BRAF Inhibition Is Associated with Enhanced Melanoma Antigen<br />

Expression and a More Favorable Tumor Microenvironment in<br />

Patients with Metastatic Melanoma<br />

Jennifer A. Wargo<br />

Dennie T. Frederick, Adriano Piris, Alexandria P. Cogdill, Zachary A. Cooper, Cecilia Lezcano, Cristina R. Ferrone,<br />

Devarati Mitra, Andrea Boni, Lindsay P. Newton, Chengwen Liu, Weiyi Peng, Ryan J. Sullivan, Donald P. Lawrence,<br />

F. Stephen Hodi, Willem W. Overwijk, Gregory Lizée, George F. Murphy, Patrick Hwu, Keith T. Flaherty, David E. Fisher, and Jennifer A. Wargo<br />

Abstract<br />

Purpose: To evaluate the effects <strong>of</strong> BRAF inhibition on the tumor<br />

microenvironment in patients with metastatic melanoma.<br />

Experimental Design: Thirty-five biopsies were collected<br />

from 16 patients with metastatic melanoma pretreatment (day<br />

0) and at 10 to 14 days after initiation <strong>of</strong> treatment with either<br />

BRAF inhibitor alone (vemurafenib) or BRAF + MEK inhibition<br />

(dabrafenib + trametinib) and were also taken at time <strong>of</strong><br />

progression. Biopsies were analyzed for melanoma antigens,<br />

T-cell markers, and immunomodulatory cytokines.<br />

Results: Treatment with either BRAF inhibitor alone or BRAF + MEK<br />

inhibitor was associated with an increased expression <strong>of</strong> melanoma<br />

antigens and an increase in CD8+ T-cell infiltrate. This was also<br />

associated with a decrease in immunosuppressive cytokines<br />

[interleukin (IL)-6 and IL-8] and an increase in markers <strong>of</strong> T-cell<br />

cytotoxicity. Interestingly, expression <strong>of</strong> exhaustion markers TIM-3<br />

and PD1 and the immunosuppressive ligand PDL1 was increased<br />

on treatment. A decrease in melanoma antigen expression and CD8<br />

T-cell infiltrate was noted at time <strong>of</strong> progression on BRAF inhibitor<br />

alone and was reversed with combined BRAF and MEK inhibition.<br />

Conclusions: Together, these data suggest that treatment<br />

with BRAF inhibition enhances melanoma antigen expression<br />

and facilitates T-cell cytotoxicity and a more favorable tumor<br />

microenvironment, providing support for potential synergy<br />

<strong>of</strong> BRAF-targeted therapy and immunotherapy. Interestingly,<br />

markers <strong>of</strong> T-cell exhaustion and the immunosuppressive ligand<br />

PDL1 are also increased with BRAF inhibition, further implying<br />

that immune checkpoint blockade may be critical in augmenting<br />

responses to BRAF-targeted therapy in patients with melanoma.<br />

Clin Cancer Res; 19(5); 1225–31. ©2013 <strong>AACR</strong>.<br />

Clin Cancer Res March 1, 2013 19:5 1225–31; Published OnlineFirst<br />

January 10, 2013; doi:10.1158/1078-0432.CCR-12-1630<br />

Research Article<br />

Analysis <strong>of</strong> Tumor Specimens at the Time <strong>of</strong> Acquired Resistance to<br />

EGFR-TKI Therapy in 155 Patients with EGFR-Mutant Lung Cancers<br />

Helena A. Yu, Maria E. Arcila, Natasha Rekhtman, Camelia S. Sima, Maureen F. Zakowski, William Pao, Mark G. Kris,<br />

Vincent A. Miller, Marc Ladanyi, and Gregory J. Riely<br />

Gregory J. Riely<br />

Abstract<br />

Purpose: All patients with EGF receptor (EGFR)–mutant lung<br />

cancers eventually develop acquired resistance to EGFR tyrosine<br />

kinase inhibitors (TKI). Smaller series have identified various<br />

mechanisms <strong>of</strong> resistance, but systematic evaluation <strong>of</strong> a large<br />

number <strong>of</strong> patients to definitively establish the frequency <strong>of</strong><br />

various mechanisms has not been conducted.<br />

Experimental Design: Patients with lung adenocarcinomas<br />

and acquired resistance to erlotinib or gefitinib enrolled onto a<br />

prospective biopsy protocol and underwent a rebiopsy after the<br />

development <strong>of</strong> acquired resistance. Histology was reviewed.<br />

Samples underwent genotyping for mutations in EGFR, AKT1, BRAF,<br />

ERBB2, KRAS, MEK1, NRAS and PIK3CA, and FISH for MET and HER2.<br />

Results: Adequate tumor samples for molecular analysis were obtained<br />

in 155 patients. Ninety-eight had second-site EGFR T790M mutations<br />

[63%; 95% confidence interval (CI), 55%–70%] and four had small cell<br />

transformation (3%, 95% CI, 0%–6%). MET amplification was seen in 4<br />

<strong>of</strong> 75 (5%; 95% CI, 1%–13%). HER2 amplification was seen in 3 <strong>of</strong> 24 (13%;<br />

95% CI, 3%–32%). We did not detect any acquired mutations in PIK3CA,<br />

AKT1, BRAF, ERBB2, KRAS, MEK1, or NRAS (0 <strong>of</strong> 88, 0%; 95% CI, 0%–4%).<br />

Overlap among mechanisms <strong>of</strong> acquired resistance was seen in 4%.<br />

Conclusions: This is the largest series reporting mechanisms <strong>of</strong><br />

acquired resistance to EGFR-TKI therapy. We identified EGFR T790M<br />

as the most common mechanism <strong>of</strong> acquired resistance, whereas<br />

MET amplification, HER2 amplification, and small cell histologic<br />

transformation occur less frequently. More comprehensive methods<br />

to characterize molecular alterations in this setting are needed to<br />

improve our understanding <strong>of</strong> acquired resistance to EGFR-TKIs.<br />

Clin Cancer Res; 19(8); 2240–7. ©2013 <strong>AACR</strong>.<br />

Clin Cancer Res April 15, 2013 19:8 2240–7; Published OnlineFirst<br />

March 7, 2013; doi:10.1158/1078-0432.CCR-12-2246<br />

The <strong>Best</strong> <strong>of</strong> the <strong>AACR</strong> <strong>Journals</strong> 17

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