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XIII European Conference on the Spectroscopy of ... - ecsbm 2009

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Palermo, August 28 – September 2, <strong>2009</strong> 13 th ECSBM −−−− Book <strong>of</strong> Abstracts<br />

Protein dynamics and functi<strong>on</strong>ality: <strong>the</strong> role <strong>of</strong><br />

hydrati<strong>on</strong> shell waters<br />

JOEL M. FRIEDMAN<br />

Dept <strong>of</strong> Physiology and Biophysics, Albert Einstein College <strong>of</strong> Medicine,<br />

Br<strong>on</strong>x, New York USA 10461<br />

It has become fully apparent that protein functi<strong>on</strong>ality requires that <strong>the</strong> protein be dynamically<br />

active and that solvent moti<strong>on</strong>s are needed for activati<strong>on</strong> <strong>of</strong> functi<strong>on</strong>ally important protein<br />

dynamics. In attempting to study <strong>the</strong> interplay between dynamics and functi<strong>on</strong>ality <strong>on</strong>e is<br />

c<strong>on</strong>fr<strong>on</strong>ted with <strong>the</strong> complicati<strong>on</strong> that <strong>the</strong>re is myriad <strong>of</strong> different types <strong>of</strong> dynamics displayed by<br />

proteins. How to organize <strong>the</strong>se dynamics into a meaningful and workable scheme is a challenge.<br />

One promising approach is based <strong>on</strong> Frauenfelder and coworkers solvent slaving c<strong>on</strong>cept which<br />

defines a hierarchy <strong>of</strong> protein dynamics based <strong>on</strong> which category <strong>of</strong> solvent moti<strong>on</strong> c<strong>on</strong>trols <strong>the</strong><br />

enthalpic barrier associated with specific c<strong>on</strong>formati<strong>on</strong>al fluctuati<strong>on</strong>s and relaxati<strong>on</strong>s. This c<strong>on</strong>cept<br />

dictates that an overall approach to <strong>the</strong> study <strong>of</strong> <strong>the</strong> dynamical basis for protein functi<strong>on</strong>ality<br />

include four elements: functi<strong>on</strong>, protein dynamics, solvent moti<strong>on</strong>s and <strong>the</strong>ir interdependence. The<br />

presentati<strong>on</strong> will describe how we have used sol-gel and glass matrices in combinati<strong>on</strong> with an<br />

extensi<strong>on</strong> <strong>of</strong> <strong>the</strong> solvent slaving c<strong>on</strong>cept in <strong>the</strong> form our proposed Protein Dynamic State Model to<br />

link functi<strong>on</strong>ality, c<strong>on</strong>formati<strong>on</strong>al dynamics and solvent properties. Additi<strong>on</strong>ally we will present<br />

advances in <strong>the</strong> use <strong>of</strong> several spectroscopic tools including vibr<strong>on</strong>ic side band spectroscopy to<br />

probe <strong>the</strong> resp<strong>on</strong>se <strong>of</strong> hydrati<strong>on</strong> shell waters to added osmolytes and <strong>the</strong> correlated impact <strong>on</strong><br />

protein properties. A general picture based <strong>on</strong> <strong>the</strong>se studies will be presented that links hydrati<strong>on</strong><br />

shell water properties, dynamics and functi<strong>on</strong>ality.<br />

5

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