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LIST OF PUBLICATIONS<br />

--------------------------------------------------------------------------------------------------------------------------------------------<br />

2012<br />

# Yazmid Reyes-Dominguez, Stefan Boedi, Michael Sulyok, Gerlinde Wiesenberger, Norbert Stoppacher Rudolf<br />

Krska and Joseph Strauss (2012). Heterochromatin influences the secondary metabolite profile in the plant<br />

pathogen Fusarium graminearum. Fungal Genet. Biol. 49: 39-47.<br />

---------------------------------------------------------------------------------------------------------------------------------------<br />

2010-2011<br />

# Hans-Wilhelm Nützmann, Yazmid Reyes-Dominguez, Volker Schroeckh, Kirstin Scherlach, Christian<br />

Hertweck, Joseph Strauss and Axel A. Brakhage (2011). Bacteria induced natural product formation in the fungus<br />

Aspergillus nidulans requires Saga/Ada mediated histone acetylation. Proc.Natl.Acad.Sci, 108: 14282-14287<br />

# Markus Gorfer, Marzena Blumhoff, Sylvia Klaubauf, Alexander Urban, Erich Inselsbacher, Dragana Bandian,<br />

Birgit Mitter, Angela Sessitsch, Wolfgang Wanek, Joseph Strauss (2011). Community profiling and gene<br />

expression of fungal assimilatory nitrate reductases in agricultural soil ISME-J. 5: 1771-1783.<br />

doi: 10.1038/ismej.2011.53. Epub 2011 May 12<br />

# Susanna De Maria, Anna R. Rivelli, Melanie Kuffner, Angela Sessitsch, Walter W. Wenzel, Markus Gorfer,<br />

Joseph Strauss, Markus Puschenreiter (2011). Interactions between accumulation of trace elements and<br />

macronutrients in Salix caprea after inoculation with rhizosphere microorganisms. Chemosphere May<br />

doi:10.1016/j.chemosphere.2011.05.002<br />

# Katrin Glaser, Evelyn Hackl, Erich Inselsbacher, Joseph Strauss,Wolfgang Wanek, Sophie Zechmeister-<br />

Boltenstern and Angela Sessitsch (2010). Dynamics ofammonia-oxidizing communities in barley-planted bulk<br />

soiland rhizospherefollowing nitrateandammoniumfertilizer amendment. FEMS Microbial Ecology 74: 575-591<br />

(published online Aug. 2010. DOI:10.1111/j.1574-6941.2010.00970.x)<br />

# Erich Inselsbacher, Wolfgang Wanek, Katrin Ripka, Evelyn Hackl, Angela Sessitsch, Joseph Strauss, Sophie<br />

Zechmeister-Boltenstern (2010). Greenhouse gas fluxes respond to different N fertilizer types due to altered<br />

plant-soil-microbe interactions. (Plant and Soil, Oct. DOI 10.1007/s11104-010-0597-6)<br />

# Christina Kaiser, Lucia Fuchslueger, Marianne Koranda, Markus Gorfer, Claus F.Stange, Barbara Kitzler,<br />

Frank Rasche, Joseph Strauss, Angela Sessitsch, Sophie Zechmeister-Boltenstern, and Andreas Richter (2011)<br />

Plants control the seasonal dynamic of microbial nitrogen cycling in a beech forest soil by belowground carbon<br />

allocation. Ecology 92: 1036-1051<br />

# Thorsten Schinko, Harald Berger, Wanseon Lee, Andreas Gallmetzer, Katharina Pirker, Robert Pachlinger,<br />

Ingrid Buchner, Thomas Reichenauer, Ulrich Güldner and Joseph Strauss (2010) The Aspergillus nidulans<br />

nitrate transcriptome reveals connections to nitric oxide metabolism. Mol.Mircobiol. 78: 720-738.<br />

# Klaubauf, S., Inselsbacher, E., Zechmeister-Boltenstern, S., Wanek, W., Gottsberger, R., Strauss, J., and<br />

Gorfer, M. 2010. Molecular diversity of fungal communities in agricultural and grassland soils from Lower<br />

Austria. Fungal Diversity 44: 65-75<br />

# Joseph Strauss and Yazmid Reyes-Dominguez (2011). Regulation of secondary metabolism by chromatin<br />

structure and epigenetic codes (review article). Fungal Genet. Biol. 48: 62-68 (online July 2010<br />

doi:10.1016/j.fgb.2010.07.009;<br />

# Katharina M. Keiblinger, Edward K. Hall, Ute Szukics, Ieda Hämmerle, Günther Ellersdorfer, Wolfgang<br />

Wanek, Katja Sterflinger, Sandra Böck, Joseph Strauss, Andreas Richter and Sophie Zechmeister-Boltenstern.


(2010) The Effect of Resource Quantity and Resource Stoichiometry on Microbial Carbon Use Efficiency.<br />

FEMS Microbial Ecology 73: 430-440<br />

# Yazmid Reyes-Dominguez, JinWoo Bok, Harald Berger, Keats Shwab, Andreas Gallmetzer, Claudio<br />

Scazzocchio, Nancy Keller and Joseph Strauss (2010). Heterochromatic marks are associated with the<br />

repression of secondary metabolism clusters in Aspergillus nidulans. Mol. Microbiol. 76: 1376-1386<br />

# Igor Y. Morozov, Meriel G. Jones, Dave G. Spiller, Daniel J. Rigden, Christoph Dattenböck, Rene Novotny,<br />

Joseph Strauss and Mark X. Caddick (2010) Distinct roles for Caf1, Ccr4, Edc3 and CutA in the coordination of<br />

transcript deadenylation, decapping and P-body formation in Aspergillus nidulans. Mol. Microbiol. 76: 503-516<br />

# Kuffner, M., De Maria, S., Puschenreiter, M., Fallmann, K., Wieshammer, G., Gorfer, M., Strauss, J., Rivelli,<br />

A.R., and Sessitsch, A. (2010). Culturable bacteria from Zn and Cd-accumulating Salix caprea with differential<br />

effects on plant growth and heavy metal availability. J. Appl. Microbiol.. 108:1471-1484)<br />

# Erich Inselsbacher, Nina Hinko-Najera Umana, Florian C. Stange, Markus Gorfer, Elisabeth Schüller, Katrin<br />

Ripka, Sophie Zechmeister-Boltenstern, Rebecca Hood-Novotny, Joseph Strauss, and Wolfgang Wanek (2010).<br />

Short-term competition between crop plants and soil microbes for inorganic N fertilizer. Soil Biol. & Biochem.<br />

42: 360-372<br />

2009 - 2006<br />

IF 2009-2006: 64,2<br />

# M. Gorfer, H. Persak, H, Berger, S. Brynda, D. Bandian, and J. Strauss (2009). Identification of heavy metal<br />

regulated genes from the root associated ascomycete Cadophora finlandica using a genomic microarray.<br />

Mycological Research 113: 1377-1388<br />

# Jin Woo Bok, , Yi-Ming Chiang, Edyta Szewczyk, Yazmid Reyes-Dominguez, Ashley D. Davidson, James F.<br />

Sanchez, Hsien-Chun Lo, Kenji Watanabe, Joseph Strauss, Berl R. Oakley, Clay C. C. Wang, and Nancy P.<br />

Keller (2009). Chromatin-level regulation of cryptic biosynthetic gene clusters in Aspergillus nidulans. Nature<br />

Chem. Biol. 5: 462-464<br />

# Frederico Marianetti Soriani, Marcia Regina Kress, Paula Fagundes de Gouvêa, Iran Malavazi, Marcela<br />

Savoldi, Andreas Gallmetzer, Joseph Strauss, Maria Helena de Souza Goldman and Gustavo Henrique Goldman<br />

(2009). Functional characterization of the Aspergillus nidulans methionine sulfoxide reductases (msrA and<br />

msrB). Fungal Genetics and Biology 46:410-417<br />

# Inselsbacher E, Ripka K, Klaubauf S, Fedosoyenko D, Hackl E, Gorfer M, Hood-Novotny R, Von Wirén N,<br />

Sessitsch A, Zechmeister-Boltenstern S, Wanek W and Strauss J (2009). A cost-effective high-throughput<br />

microcosm system for studying nitrogen dynamics at the plant-microbe-soil interface. Plant and Soil 317: 293-<br />

307<br />

# Asjad Basheer, Harald Berger, Yazmid Reyes-Dominguez and Joseph Strauss (2009). A library-based method<br />

to rapidly analyze chromatin accessibility at multiple genomic regions. Nucleic Acid Research 37:e42<br />

# Alexander Urban, Markus Puschenreiter, Joseph Strauss and Markus Gorfer (2008). Diversity and structure<br />

of ectomycorrhizal and co-associated fungal communities in a serpentine soil. Mycorrhiza 18: 339-345<br />

# Harald Berger, Asjad Basheer, Sandra Böck, Thomas Dalik, Friedrich Altmann, and Joseph Strauss (2008).<br />

Dissecting individual steps of nitrogen transcription factor cooperation in the Aspergillus nidulans nitrate cluster.<br />

Mol. Microbiol 69: 1385 -1398<br />

# Reyes-Dominguez, Y., Narendja, F., Berger, H., Gallmetzer, A., Fernandez, R., Garcia, I., Scazzocchio, C. and<br />

Strauss, J. (2008) Nucleosome positioning and histone H3 acetylation are independent processes in the<br />

Aspergillus nidulans prnD-prnB bidirectional promoter. Euk. Cell 7:656-63.<br />

# Elke Kainz, Andreas Gallmetzer, Christian Hatzl, Juergen H. Nett, Huijuan Li, Thorsten Schinko, Robert<br />

Pachlinger , Harald Berger, Tillmann Gerngross, Stefan Wildt and Joseph Strauss (2008). N-glycan


modification in Aspergillus species. Appl. Environ. Microbiol 74:1076-86.<br />

# Rene Novotny, Harald Berger, Thorsten Schinko, Paul Messner, Christina Schäffer and Joseph Strauss<br />

(2008). A temperature-sensitive expression system based on the Geobacillus stearothermophilus NRS 2004/3a<br />

sgsE S-layer gene promoter. Biotechnol Appl Biochem. 49: 35-40<br />

# Markus Gorfer, Sylvia Klaubauf, Dragana Bandian, and Joseph Strauss (2007). Cadophora finlandia and<br />

Phialocephala fortinii: Agrobacterium-mediated transformation and functional GFP-expression. Mycological<br />

Res. 111:850-855<br />

# M.N. Dos Santos Utmazian, P. Schweiger, P. Sommer, M. Gorfer, J. Strauss, and W.W. Wenzel (2007).<br />

Influence of Cadophora finlandica and other microbial treatments on cadmium and zinc uptake in willowsgrown<br />

on polluted soil. Plant Soil Environ. 53: 158- 166<br />

# Andreas Bernreiter, Ana Ramon, Javier Fernández-Martínez, Harald Berger, Lidia Araújo-Bazan, Eduardo A.<br />

Espeso, Robert Pachlinger, Ingund Anderl , Claudio Scazzocchio and Joseph Strauss (2007). Nuclear export of<br />

the transcription factor NirA is a regulatory checkpoint for nitrate induction in Aspergillus nidulans.<br />

Mol.Cell.Biol. 27: 791-802<br />

# Harald Berger, Robert Pachlinger, Igor Morozov, Mark Caddick, Sabine Goller, Frank Narendja and Joseph<br />

Strauss (2006). The GATA factor AreA regulates localization and in vivo binding site occupancy of the nitrate<br />

specific transcriptional activator NirA. Mol. Microbiol. 59: 433-446<br />

#Mark X Caddick, Meriel G Jones, J. Martin van Tonder1, Hélène Le Cordier1,Frank Narendja, Joseph Strauss,<br />

and Igor Y Morozov (2006) Opposing signals differentially regulate transcript stability in Aspergillus nidulans.<br />

Mol.Microbiol. 62: 509–519<br />

2005 - 2000<br />

# Robert Pachlinger, Rudolf Mitterbauer, Gerhard Adam and Joseph Strauss (2005). Metabolically independent<br />

and accurately adjustable Aspergillus sp. expression system. Appl. Environ. Microbiol 71: 672-678<br />

# M.Isabel Muro Pastor, Joseph Strauss, Ana Ramón and Claudio Scazzocchio (2004). A paradoxical mutant<br />

GATA factor. Eukaryot Cell 3:393-405<br />

# René Novotny, Christina Schäffer, Joseph Strauss, and Paul Messner (2004). S-Layer glycan-specific loci on<br />

the chromosome of Geobacillus stearothermophilus NRS 2004/3a and dTDP-L-rhamnose biosynthesis potential<br />

of Geobacillus stearothermophilus strains. Microbiology 150: 953-65.<br />

# F. Narendja, S. P. Goller, M. Wolschek and J. Strauss. 2002. Nitrate and the GATA factor AreA are<br />

necessary for in vivo binding of NirA, the pathway-specific transcriptional activator of Aspergillus<br />

nidulans. Mol. Microbiol. 44: 573-83.<br />

# C. Galhaup, S. Goller, C. K. Peterbauer, J. Strauss, and D. Haltrich. (2002). Characterization of the major<br />

laccase isoenzyme from Trametes pubescens and regulation of its synthesis by metal. Microbiology 148: 2159-<br />

2169<br />

# J. Hicks, R. A Lockington, J. Strauss, D. Dieringer, C. P. Kubicek, J. Kelly, and N. Keller. 2001. RcoA has<br />

pleiotropic effects on Aspergillus nidulans cellular development. Mol.Microbiol 39:1482-93<br />

# B. M Abdallah, T. Simões, A. R. Fernandes, J. Strauss, B. Seiboth, I. Sá-Correia, and C. P. Kubicek . 2000.<br />

Glucose does not activate the plasma-membrane-bound H + -ATPase but affects pmaA transcript abundance in<br />

Aspergillus nidulans. Arch Microbiol 174: 340-345<br />

1999-1996


# M. Muro, R. Gonzalez*, J. Strauss, F. Narendja and C. Scazzocchio. 1999. The GATA factor AreA is essential<br />

for chromatin remodelling in an eucaryotic bidirectional promoter. EMBO J. 18: 1584-1597 (*authors<br />

contributed equally to the work<br />

# J. Strauss, H. Horvath, B. M. Abdallah, J. Kindermann, R.L. Mach and C. P. Kubicek. 1999. The function of<br />

CreA, the carbon catabolite repressor of Aspergillus nidulans, is regulated at the transcriptional and posttranscriptional<br />

level. Mol. Microbiol 32: 169-178<br />

# M. Wolschek, F. Narendja, J. Karlseder, C.P. Kubicek, C. Scazzocchio, and J. Strauss. 1998. In situ detection<br />

of protein-DNA interactions in filamentous fungi by in vivo footprinting. Nucleic Acid Res. 26: 3862-3864<br />

# J. Strauss, M. Muro-Pastor and C. Scazzocchio. 1998. The regulator of nitrate assimilation in ascomycetes is a<br />

dimer which binds a non-repeated, asymmetrical sequence. Mol.Cell.Biol. 18: 1339-1348<br />

# D. Turner, W. Kovacs, K. Kuhls, E. Lieckfeld, J. Strauss, G. J. Samuels and C.P. Kubicek. 1997.<br />

Biogeography and phenotypic variation in Trichoderma sect. Longibrachiatum and associated Hypocrea species.<br />

Mycol. Res. 101: 449 – 459<br />

# R.L. Mach, J. Strauss, S. Zeilinger, M. Schindler and C.P. Kubicek. 1996. Carbon catabolite repression of<br />

xyn1 (xylanase I - encoding) gene expression in Trichoderma reesei. Mol. Microbiol 21: 1273-1281<br />

# M. Lorito, R.L. Mach, P. Sposato, J. Strauss, C.K. Peterbauer and C.P. Kubicek. (1996). Mycoparastic<br />

interaction relieves binding of the Cre1 carbon catabolite repressor protein to promotor sequences of the ech-42<br />

(endochitinase encoding) gene in Trichoderma harzianum. Proc.Natl.Acad.Sci. USA 93: 14868-14872<br />

1995 and before<br />

# P.J. Punt, J. Strauss, R. Smit, J.R. Kinghorn, C.A.M.J.J. van den Hondel and C. Scazzocchio. 1995. The<br />

intergenic region between the divergently transcribed niiA and niaD genes of Aspergillus nidulans contains<br />

multiple NirA binding sites which act bidirectionally. Mol.Cell.Biol 15: 5688-5699<br />

# R.L. Mach, B. Seiboth, A. Myasnikov., R. Gonzalez, J. Strauss, A.M. Harkki and C.P. Kubicek. 1995. The<br />

bgl1 gene of Trichoderma reesei QM 9414 encodes an extracellular, cellulose-inducible ß-glucosidase involved<br />

in cellulase induction by sophorose. Mol. Microbiol. 16. 687-679<br />

# J. Strauss, R.L. Mach, S. Zeilinger, G. Hartler, G. Stoeffler, M. Wolschek, and C.P. Kubicek. 1995. Cre1, the<br />

carbon catabolite repressor protein from Trichoderma reesei. FEBS Letters 376, 103-107<br />

# G. Burger, J. Strauss, C. Scazzocchio and F.B. Lang. 1991. nirA, the pathway specific regulatory gene of<br />

nitrate assimilation in Aspergillus nidulans encodes a putative GAL 4-type zinc-finger protein and contains 4<br />

introns in highly conserved regions. Mol.Cell.Biol. 12: 5746-5755<br />

# J. Strauss and C. P. Kubicek. 1990. ß-glucosidase and cellulase formation by Trichoderma reesei mutant<br />

defective in constitutive ß-glucosidase formation. J.Gen.Microbiology 136: 1321-1326<br />

2. BOOK CHAPTERS<br />

# C.P.Kubicek, R. Messner, C. Fritscher, J. Strauss and E.M. Kubicek-Pranz. 1990. Regulatory aspects of<br />

formation and secretion of cellulases by Trichoderma reesei. In: Trichoderma reesei cellulases: Biochemistry,<br />

genetics, physiology and applications. Kubicek et al. (eds). Royal Chem. Society, Cambridge, UK<br />

# C. P. Kubicek, S. Zeilinger, R. L Mach,. and J. Strauss. (1998) Regulation of xylanase gene expression in<br />

Trichoderma reesei. Proceedings of the Third TRICEL Symposium on Carbohydrases from Trichoderma<br />

reesei and other Microorganisms, (Claeyssens, M., Piens, K., and Nerinckx, W.) pp. 274-279 The Royal<br />

Society of Chemistry, Cambridge, UK<br />

# B. Gesslbauer, W. Atzenhofer, Y. Halden, J. Strauss, A.J. Kungl.(2001). Purification, biophysical<br />

characterisation and crystallisation of the DNA-binding domain of NirA. Proceedings of the 4th International


Conference on Molecular Structural Biology, A.J. Kungl & P.J. Kungl (Eds.), The Austrian Chemical Society<br />

(Vienna): 79, 2001.<br />

# Yazmid Reyes-Dominguez, Stefan Boedi and Joseph Strauss (2011) Chromatin immunoprecipitation (ChIP)<br />

analysis in filamentous fungi. Methods in Molecular Biology<br />

3. PATENTS<br />

Robert Pachlinger and Joseph Strauss (2004): Steroid Receptor Modulation of Gene Expression (Patent Nr<br />

WO2004/058947). published on July 15, 2004<br />

4. INVITED LECTURES<br />

(42)<br />

2012<br />

# Agnieszka Gacek and Joseph Strauss (2012). The chromatin code of fungal secondary metabolism. Invited<br />

lecture, April 2012, Imperial College, Faculty of Medicine, Londen (UK)<br />

# Stefan Boedi and Joseph Strauss (2012). Heterochromatin influences the secondary metabolite profile in the<br />

plant pathogen Fusarium graminearum. Selected oral contribution to Fusarium Satellite meeting of the 11 th<br />

European Fungal Genetics Conference, Marburg, (D), April 2012<br />

2009 – 2011<br />

# Joseph Strauss (2009) Epigenetics in Aspergillus? Aspergillus Satellite Meeting of the<br />

25 th Fungal Genetics Conference, Asilomar, March 2009<br />

# Joseph Strauss (2009) Integration of nitrate assimilation into the nitrogen regulatory network of Aspergillus<br />

nidulans. 25 th Fungal Genetics Conference, Asilomar, March 2009 (invited plenary lecture).<br />

# Joseph Strauss (2009) Gene regulation in an epigenetic context in Aspergillus nidulans. University of<br />

Göttingen, Colloquium. April 2009.<br />

# Joseph Strauss (2009) Metabolic gene regulation and the role of epigenetics in Aspergillus nidulans.<br />

University of Jena Colloquium. May 2009.<br />

# Joseph Strauss (2010) Chromatin-level regulation of metabolic gene clusters. Plenary Lecuture at the 10 th<br />

European Conference of Fungal Genetics, Amsterdam (April 2010)<br />

# Joseph Strauss (2010) Epigenetic regulation of fungal secondary metabolism. Gregor Mendel Institute of the<br />

Austrian Academy of Science, Vienna (November 2010)<br />

# Joseph Strauss (2010) Schimmelpilze als Quelle neuer bioaktiver Wirkstoffe. 3rd European Antibiotics<br />

Awareness Day, University of Veterinary Medicine, Vienna (November 2010).<br />

Markus Gorfer and Joseph Strauss (2010). Genometalix – genomics for a cleaner environment. WWTF-<br />

Science Day (November 2010, Vienna)<br />

Joseph Strauss and Markus Gorfer (2010). Nitro-Genome – increasing nitrogen fertilizer efficiency. WWTF-<br />

Science Day (November 2010, Vienna)


Agnieszka Gacek, Yazmid Reyes-Domínguez, Michael Sulyok and Joseph Strauss (2011). Histone H3 demethylases<br />

are involved in regulating primary and secondary metabolism. Poster selected for oral presentation,<br />

26 th Fungal Genetics Conference, Asilomar, CA (March 2011)<br />

Ana T. Marcos, Thorsten Schinko, Joseph Strauss, and David Cánovas (2011) Nitric oxide (NO) is a<br />

morphogenic signal in fungi. Poster selected for oral presentation, 26 th Fungal Genetics Conference, Asilomar,<br />

CA (March 2011)<br />

# Joseph Strauss (2011) Gen-Ressource Mikroben oder: wie man verborgene Wirkstoff-Schätze entdecken<br />

kann. eco-plus Innovationsdialog (April 2011,Tulln),<br />

# Joseph Strauss (2011). Fungal Genomics – Models and Applications. AIT Brown-Bag Seminar Series (April<br />

2011, Vienna).<br />

2006 – 2008<br />

# Harald Berger, Robert Pachlinger, Igor Morozov, Sabine Goller, Frank Narendja, Mark Caddick and Joseph<br />

Strauss. The GATA factor AreA regulates loclaization and in vivo binding site occupancy of the nitrate activator<br />

NirA. ECFG 8, Vienna, Austria , April 2006)<br />

# Yazmid Reyes and Joseph Strauss. Nitrate utilization in Aspergillus: A small molecule with a large impact.<br />

Symposium Nitrogen in ascomycetes. Mexico November 2006.<br />

# Joseph Strauss et al. News from a lower eukaryote nitrate utilizer: molecular regulation by nuclear transport.<br />

Invited Seminar University of Liverpool (UK), January 2007.<br />

# Joseph Strauss et al. Nitrate assimilation in eukaryotes: from a model fungus to a model plant. Invited<br />

Seminar MONSANTO Inc., St.Luis, USA. February 2007.<br />

# Joseph Strauss et al. Control mechanisms of nitrate assimilation in Aspergillus nidulans . Fungal Genetics<br />

Conference Asilomar, CA, USA. March 2007<br />

# Joseph Strauss et al. Nitrogen assimilation in a lower eukaryote: molecular switches regulating nitrate and<br />

ammonium assimilation in the model fungus Aspergillus nidulans. Invited Seminar, Inst. for Plant Nutrition,<br />

Univ. of Hohenheim, Germany. April 2007<br />

# Joseph Strauss et al. Nitrate regulation in Aspergillus. Symposium NTROGEN 2007. Lancaster (UK) July<br />

2007.<br />

# Yazmid Reyes-Dominguez and Joseph Strauss: Chromatin regulation of mycotoxin production in<br />

Aspergillus nidulans. EUROFUNG Symposium, Wageningen (NL), June 2007<br />

# Joseph Strauss et al. The fungal nitrate assimilation system. University of Cordoba, Spain, May 2008<br />

# Joseph Strauss et al. The chromatin connection between primary and secondary metabolism. GORDON<br />

RESEARCH CONFERENCE, June 2008, USA<br />

# Joseph Strauss et al. The fungal transcription factors: functions, examples and gaps. Final meeting of the<br />

EUROFUNG-BASE Project, Barcelona, Spain October 2008.<br />

2000 – 2005<br />

# J.Strauss. Natural and agriculturally influenced nitrogen cycling in soils and the consequences of fertilizer<br />

input on soil and water ecology. Symposium at the Agricultural University of Vienna: "A Challenging New Role<br />

of Modern Biotechnology in Sustainable Agriculture and Soil Fertility. Vienna/Austria (October 2000).


# J.Strauss et al: "News from a model fungus: Transkriptionsfaktoren, Chromatinstruktur und Regulation der<br />

Nitrat-Assimilierung von Aspergillus nidulans". Institute of Pharmaceutical Chemistry, University of Graz<br />

(Dez.2000).<br />

# J.Strauss et al: " News from the Aspergillus nitrate utilization cluster: pathway-specific versus wide domain<br />

regulators" Second International Symposium on Nitrogen Metabolism in Ascomycetes. Hacienda Vista Hermosa,<br />

Mexico (March 2001).<br />

# J.Strauss: " Aspergillus as a fungal model system". International Symposium of the Agricultural Universities<br />

Vienna, Budapest and Prag. Vienna. (November 2001)<br />

# J.Strauss: " The power of a model: studying transcription factors in the fungus Aspergillus nidulans. Invited<br />

Lecture at Dartmouth College of Engineering, Hanover, USA. (February 2002).<br />

# F. Narendja and J. Strauss. Characterization of adaB and ist role in the chromatin remodelling machinery of<br />

A.nidulans. ECFG 6, Pisa, April 2002.<br />

# Harald Berger, Robert Pachlinger, Sabine Goller, Frank Narendja, and Joseph Strauss. The regulators of<br />

nitrate assimilation in Aspergillus nidulans. 5 th International Symposion on Nitrate Assimilation: Molecular and<br />

Genetic Aspects (NAMGA), Cordoba, Spain (July 2002).<br />

# J. Strauss: Transcriptional Regulation of Nitrogen Cycling and the Fungal Rhizosphere. University of<br />

Hohenheim, Germany. (October 2003)<br />

# J. Strauss et al: Studying transcriptional regulation in fungi: molecular tools for environmental questions and<br />

biotech applications. Austrain Research Centers (May 2004)<br />

# J. Strauss et al: News from the Aspergillus´ nitrate system. EUROFUNGBASE Meeting , Sevilla, Spain (Nov.<br />

2005)<br />

# C. Scazzocchio and J. Strauss: Aspergillus nidulans as a model to study chromatin structure and function .<br />

EUROFUNGBASE Meeting , Sevilla, Spain (Nov. 2005)<br />

1999 and before<br />

# J. Strauss. Characterisation of the binding specificity of NirA, a transcriptional activator of Aspergillus<br />

nidulans. 2 nd European Conference on Fungal Genetics, Lunteren, NL, 1994<br />

# J. Strauss, R.L. Mach and C.P. Kubicek. Cre1, the carbon catabolite repressor protein from Trichoderma<br />

reesei. 2 nd Conference on Fungal Molecular Biology in Berlin, 1995<br />

# J. Strauss, R.L. Mach, S. Zeilinger, G. Hartler, G. Stöffler, M. Wolschek, and C.P. Kubicek. Cre1, the carbon<br />

catabolite repressor protein from Trichoderma reesei. Conference on Fungal Molecular Biology, Berlin,<br />

Germany, 1995<br />

# J. Strauss. Nitrate Utilization in Aspergillus nidulans: An old model features new fashions. First International<br />

Symposium Nitrogen Metabolism in Ascomycetes, San Jose Vistahermosa, Mexico, 1997<br />

# J. Strauss: In vivo footprinting in filamentous fungi. UNESCO International Training Course for the<br />

Manipulation of the Fungal Genome, Irapuato, Mexico, 1998<br />

# J. Strauss. Nitrate utilization in Aspergillus nidulans. Invited Chairman and lecture at the 6 th International<br />

Congress on Amino Acids (August 1999, Bonn)<br />

# J.Strauss: The Nitrate utilization model in Aspergillus nidulans. Annual Meeting of the ÖBG/ÖGGGT.<br />

(September 1999, Graz/Austria).<br />

# J. Strauss: The nitrate assimilation system in Aspergillus nidulans as a model for studying eucaryotic<br />

transcription factors. SFB – Kolloquium (November 1999, Innsbruck/ Austria)


5. CONGRESS AND SYMPOSIUM ORGANIZATION<br />

# A CHALLENGING NEW ROLE OF MODERN BIOTECHNOLOGY IN SUSTAINABLE AGRICULTURE<br />

AND SOIL FERTILITY.<br />

Symposium organized in the frame of the "Rhizosphere Management" project of the Agricultural University of<br />

Vienna. October 4th 2000, University of Agricultural Sciences, Vienna.<br />

Presentations by Yoram Kapulnik (Israel), Diane Williams (USA), Walter Wenzel (Austria), Donald Marx<br />

(USA), Uri Rosenberg (Israel) and Luis Fanjul (Mexico).#<br />

# EXPLOITING THE FUNGAL WORLD: FROM BASIC SCIENCE TO BIOTECHNOLOGICAL AND<br />

AGRICULTURAL OPPORTUNITIES<br />

Symposium organized in the frame of the International Congress of the Agricultural Universities Vienna, Prague<br />

and Budapest. November 19-21, 2001, Vienna Hofburg.<br />

Presentations by members of the University (Prillinger, Mattanovic, Adam, Strauss), M. Lemmens and H.<br />

Bürstmayr (IFA Tulln) and F. Trail (Michigan State University, USA).<br />

# 8 th EUROPEAN CONFERENCE ON FUNGAL GENETCIS “ECFG 8”. April 8-11, 2006. Vienna, Austria.<br />

Co-organizer of the conference with more than 500 participants from all over the world. Presentation and<br />

discussion forum for academics, industrialists, students and fungal experts.<br />

6. CONFERENCE PRESENTATIONS<br />

(52)<br />

2010-2012<br />

# Ana T. Marcos, Thorsten Schinko, María Ramos-Guelfo, Joseph Strauss, David Cánovas (2012). Cross-talk<br />

between nitric oxide and light for the regulation of development. ECGF Germany April 2012<br />

# Alexandra A. Soukup 1 , Joseph Strauss 2 , and Nancy P. Keller 3, 4 Suppressor mutagenesis reveals EsaA as<br />

regulator of secondary metabolism. Poster selected for oral presentation, 26 th Fungal Genetics Conference,<br />

Asilomar, CA (March 2011)<br />

2007 - 2009<br />

# Harald Berger, Asjad Basheer, Sandra Böck and Joseph Strauss (2007). Transcription independent chromatin<br />

remodelling in Aspergillus nidulans. Fungal Genetics Conference 2007, Asilomar, USA.<br />

# Andreas Bernreiter, Igor Morozov, Lidia Araujo-Bazan, Eduardo A. Espeso and Joseph Strauss (2007)<br />

Characterization of NplA, a nucleoporin involved in the regulation of mRNA translation . Conference “Nitrogen<br />

2007”, Lancaster, UK<br />

# M. Puschenreiter, A. Sessitsch, M. Kuffner, P. Sommer, E. Netherer, J. Strauss and W.W. Wenzel (2007)<br />

Inoculation of Salix caprea with rhizosphere bacteria enhances the phytoextraction capacity for Zn and Cd.<br />

ICOBTE 2007 Conference<br />

# Joseph Strauss (2007). The NITRO-GENOME Project: Increasing Nitrogen Fertilizer Use Efficiency by<br />

Understanding Microbial Nitrogen Cycling. Conference “N2007 - Nitrogen 4th Conference, Bahia/Brazil,<br />

October 2007<br />

# Inselsbacher, E,; Hackl, E; Klaubauf, S; Ripka, K; Sessitsch, A; Strauss, J; Von Wirén, N; Wanek, W;<br />

Zechmeister-Boltenstern, S (2007). “NITROGENOM” – A standardized microcosm system to study nitrogen<br />

pathways and soil-plant-microbe relationships in agricultural soils. Conference “N2007 - Nitrogen 4th<br />

Conference, Bahia/Brazil, October 2007


Ripka, K 1 ; Hackl, E 1 ; Inselsbacher, E 2,3 ; Klaubauf, S 4 ; Strauss, J 4 ; Wanek, W 2 ; Zechmeister-Boltenstern, S 3 and<br />

Sessitsch, A 1 . Abundance and community composition of nitrifiers and denitrifiers in various agricultural soil<br />

habitats (Feb. 2008)<br />

Inselsbacher E, Wanek W, Zechmeister-Boltenstern S, Hackl E, Hood R, Klaubauf S, Ripka K, Sessitsch A,<br />

Strauss J, Von Wirén N<br />

“NITROGENOM” – Studying nitrogen pathways and soil-plant-microbe relationships in agricultural soils within<br />

a standardized microcosm system . EUROSOIL 2008<br />

Igor Morozov, Rene Novotny, Harald Berger, Joseph Strauss and Mark Caddick. The PopB deadenylase<br />

mediates nitrogen metabolite signalled transcript degradation. European Fungal Genetics Conference 2008.<br />

Harald Berger, Asjad Basheer, Thomas Dalik, Sandra Böck, and Joseph Strauss.<br />

Dissecting molecular steps of cooperativity between the wide-domain GATA factor and the pathway-specific Zncluster<br />

activator in the Aspergillus nidulans nitrate cluster. European Fungal Genetics Conference 2008.<br />

Yazmid Reyes-Domínguez, Jin Woo Bok, Asjad Basher , Elliot K. Schwab, Harald Berger, Andreas Gallmetzer,<br />

Nancy.P Keller, Claudio Scazzocchio and Joseph Strauss Facultative heterochromatin is involved in switching<br />

from primary to secondary metabolism in Aspergillus nidulans. European Fungal Genetics Conference 2008.<br />

# Asjad Basheer, Harald Berger, Yazmid Reyes-Dominguez and Joseph Strauss. A library-based method to<br />

rapidly analyze chromatin accessibility at multiple genomic regions. 25 th Fungal Genetics Conference, Asilomar,<br />

USA, March 2009<br />

2004-2006<br />

# Alexander Urban, Markus Puschenreiter, Walter Wenzel, Joseph Strauss and Markus Gorfer. Structure and<br />

function of ectomycorrhiza-associated fungal communities of a mixed Scotts pine (Pinus silvestris) forest on<br />

serpentine – a holistic perspective. Microbial Ecology Congress, Vienna, 2004<br />

# Harald Berger, Robert Pachlinger and Joseph Strauss (2004). The activity of NirA, a nitrate-specific<br />

transcription factor in Aspergillus, is regulated at the level of nuclear localization and binding site accessibility.<br />

ECFG 7, Copenhagen, April 2004.<br />

# Igor Morozov, Meriel G. Jones, Frank Narendja, Nicolas Ugarte, Ammar A. Razak, Joseph Strauss and Mark<br />

X. Caddick. Differential transcript deadenylation mediates nitrogen and nitrate signalling in Aspergillus nidulans.<br />

ECFG 7, Copenhagen, April 2004<br />

# M. Puschenreiter, Dos Santos MN, Hauser M-T, Sommer P, Strauss J, Wieshammer G, Unterbrunner R,<br />

Zivkovic M and Wenzel WW. Phytoremediation of contaminated soils using willows. Prag, October 2004.<br />

# Mark X Caddick, Igor Morozov, Greg Fitzgibbon, Ammar Razak, Joseph Strauss and Meriel Jones. Nitrogen<br />

metabolite and nitrate signalling. 23 rd Fungal genetics Conference Asilomar, March 2005.<br />

# Türktas M, Puschenreiter M, Sommer P, Wenzel WW, Strauss J, Hauser M-T (2004) Molecular mechanisms<br />

involved in heavy metal accumulation by Salix caprea. Joint Annual Meeting of the ÖGBM, ÖGGGT, ÖGBT<br />

and ANGT. Innsbruck 20.-22.9.<br />

(34) Markus Puschenreiter, Mine Türktas, Peter Sommer, Walter Wenzel, Josef Strauss and Marie-Theres<br />

Hauser (2004) Heavy metal für Pflanzen. 1st prize at press release competition of “dialog gentechnik”, published<br />

by APA OTS on Sept. 21st 2004 (OTS0108 5 CI 0411 NEF0007 WI).<br />

# Puschenreiter M, Dos Santos MN, Hauser M-T, Sommer P, Strauss J, Wieshammer G, Unterbrunner R,<br />

Zivkovic M, Wenzel WW (2004). Conference on "Sustain Life - Secure Survival II. Socially and<br />

Environmentally Responsible Agribusiness. Prag 22. - 25. 9


# Puschenreiter M, Wieshammer G, Sommer P, Strauss J, Hauser M-T, Sessitsch A and Wenzel WW (2004)<br />

Metal accumulation in Salix caprea: molecular background of plant processes and associated rhizosphere<br />

microbes. Minisymposium on Microbial Ecology, University of Natural Ressources and Applied Life Sciences,<br />

Vienna, March 22nd 2004, Poster.<br />

# Türktas M, Puschenreiter M, Sommer P, Wenzel W, Strauss J Hauser, M-T (2005) Toward the determination<br />

of the genetic basis of heavy metal accumulation in six wild metallicolous and non-metallicolous Salix caprea<br />

populations. XVII International Botanical Congress. Wien 17-23.7.<br />

# Andreas Bernreiter, Harald Berger, Ana Ramon, Javier Fernández-Martínez, , Lidia Araújo, Eduardo A.<br />

Espeso, Robert Pachlinger, Ingund Anderl , Claudio Scazzocchio and Joseph Strauss (2006). Nuclear export of<br />

the transcription factor NirA is a regulatory checkpoint for nitrate induction in Aspergillus nidulans. ECFG 8,<br />

Vienna, Austria (April 2006)<br />

# Yazmid Reyes-Dominguez, Harald Berger, Claudio Scazzocchio and Joseph Strauss. Heterochromatin protein<br />

HepA regulates secondary metabolism gene expression in the filamentous fungus Aspergillus nidulans. ECFG 8,<br />

Vienna, Austria (April 2006)<br />

# René Novotny, Mario Wagner, Harald Berger, Michaela Wasinger, Iris Wille, Bernd Gesslbauer, Andreas<br />

Kungl and Joseph Strauss A proteomic approach to study nitrate signalling in the filamentous fungus Aspergillus<br />

nidulans.:2 nd FEMS CONGRESS, July 2006, Madrid<br />

1998 - 2003<br />

# J. Strauss, H. K. Horvath, B. M. Abdallah, R. L. Mach and C. P. Kubicek. Transcriptional and posttranscriptional<br />

mechanisms regulate the function of the Aspergillus nidulans carbon catabolite repressor protein<br />

CreA. Poster presented at the ECFG 4, Leon, Spain, 1998<br />

# B.M. Abdallah, M. Gorfer, J. Strauss and C.P. Kubicek. Cloning and characterization of the plasma -<br />

membrane - bound ATPase gene from Aspergillus nidulans. Poster presented at the FEBS Meeting, Copenhagen,<br />

DK, 1998<br />

# B.M. Abdallah, M. Gorfer, J. Strauss and C.P. Kubicek. Carbon catabolite regulation of the pmaA (plasmamembrane-bound<br />

H+-ATPase encoding) gene of Aspergillus nidulans. Poster presented at the Gordon<br />

Conference, New Hampshire, USA, 1998<br />

# M. Gorfer, J. Strauss, R.L.Mach, and C.P. Kubicek. Cloning of gpdA from Boletus edulis and analysis of<br />

protein-binding motifs in the corresponding promotor. Poster presentation at “Genetics and Cellular Biology of<br />

Basidiomycetes” In Nijmegen, The Nederlands, March 1998<br />

# F.Narendja, S.Goller, M.Wolschek and J.Strauss. Nitrate is necessary but not sufficient for binding of NirA,<br />

the pathway-specific transcription factor in Aspergillus nidulans. ÖGGGT Meeting 2000, Innsbruck, Austria,<br />

October 2000.<br />

# P. Sommer, G. Burgera, G. Wieshammer, W. Wenzel and J. Strauss. Effects of mycorrhizal associations on<br />

the metal uptake by willows from polluted soils: Implication for soil remediation by phytoextraction.<br />

International BOKU Congress, Vienna, Austria, November 2001.<br />

# F. Narendja and J. Strauss. Characterization of adaB and its role in the chromatin remodelling machinery of<br />

A.nidulans. ECFG 6, Pisa, April 2002.<br />

# F. Narendja, S. P. Goller, M. Wolschek and J. Strauss. Nitrate and the GATA factor AreA are necessary for in<br />

vivo binding of NirA, the pathway-specific transcriptional activator of Aspergillus nidulans. ECFG 6, Pisa, April<br />

2002.<br />

# Harald Berger, Robert Pachlinger, Sabine Goller, Frank Narendja, and Joseph Strauss. Nitrate promotes<br />

cellular translocation of the pathway specific activator in Aspergillus nidulans. 5 th International Symposion on<br />

Nitrate Assimilation: Molecular and Genetic Aspects (NAMGA), Cordoba, Spain (July 2002).<br />

1997 and before


# R. L. Mach, R. Gonzalez, J. Strauss, and C.P Kubicek., Cloning, characterisation and analysis of function of<br />

the bgl-(ß-glucosidase) gene of Trichoderma reesei. Poster presented at: 1st European Conference on Fungal<br />

Genetics, Nottingham, England, 1992<br />

# J. Strauss and C. Scazzocchio. In vitro characterisation of the binding specificity of the NirA transcriptional<br />

activator of Aspergillus nidulans. Poster presented at the EMBO Workshop on Fungal Genetics, Mallorca, Spain,<br />

1993<br />

# R.L. Mach, M. Schindler, J. Strauss and C.P. Kubicek. Cre 1- mediated glucose repression of xyn 1 (xylanase<br />

I encoding) gene expression in Trichoderma reesei. Poster presented at the 2nd European Conference on Fungal<br />

Genetics, Lunteren, NL, 1994<br />

# R. Smit, J. Strauss, P.J Punt, C. Scazzocchio and C.A.M.J.J. van den Hondel. Complex organisation of the<br />

promoter region of the divergently transcribed niiA-niaD genes of A.nidulans. Poster presented at the 2nd<br />

European Conference on Fungal Genetics, Lunteren, NL, 1994<br />

# R.L. Mach, M. Schindler, J. Strauss, and C.P Kubicek. Cre1-mediated glucose repression of xyn1 (xylanaseIencoding)<br />

gene expression in Trichoderma reesei. Poster presented at: 2nd European Conference on Fungal<br />

Genetics, Lunteren,The Netherlands,1994<br />

# J. Strauss, M. Wolschek, S. Zakeri, R. Mach, J. Karlseder, E. Wintersberger and C.P. Kubicek. Analysis of<br />

transcriptional regulation of the Aspergillus nidulans creA gene mediating glucose repression. Poster presented at<br />

the FGSC Conference Asilomar, California, 1995<br />

# R.L Mach, J. Strauss, M. Schindler, S. Zeilinger, G. Adler, and C.P Kubicek. Glucose repression of xylanase<br />

formation by Trichoderma reesei regulates xyn1 but not xyn2 gene expression and is mediated by the Cre1 gene<br />

product. Poster presented at: 18th Fungual Genetics Conference, Asilomar CA, USA, 1995<br />

# J. Strauss, M. Wolschek, R.L. Mach, S. Zakeri, J. Karlseder, E. Wintersberger, and C.P Kubicek. In vivo<br />

analysis of transcriptional regulation of Aspergillus nidulans creA gene mediating glucose repression. Poster<br />

presented at: 18th Fungual Genetics Conference, Asilomar CA, USA, 1995<br />

# M. Schindler, R.L. Mach, J. Strauss, S. Zeilinger, G. Adler, and C.P. Kubicek. Differential effect of glucose<br />

on Trichoderma reesei xyn1 and xyn2 gene expression. Poster presented at: 6th International Conference on<br />

Biotechnology in Pulp and Paper Industry Vienna, Austria, 1995<br />

# R.L. Mach J. Strauss, M. Schindler, S. Zeilinger, G. Adler, and C.P. Kubicek. Glucose repression of xylanase<br />

formation by Trichoderma reesei regulates xyn1 but not xyn2 gene expression and is mediated by the Cre1 gene<br />

product. Poster presented at: EMBO Workshop on the Molecular Biology of Filamentous Fungi, "Genome<br />

Structure, Maintenance and Expression" Ambelside, UK, 1995<br />

# R.L. Mach, J. Strauss, S. Zeilinger, M. Schindler and C.P. Kubicek. Glucose repression of xyn1 (xylanase Iencoding<br />

gene) expression by Cre1 in Trichoderma reesei requires binding of a protein complex to an inverted<br />

repeat of the Cre1 consensus sequence. Poster presented at: 3rd European Conference on Fungal Genetics,<br />

Münster, Germany, 1996<br />

# M. Lorito, R.L. Mach, P. Sposato, J. Strauss, C.K. Peterbauer, and C.P. Kubicek. Mycoparasitic interaction<br />

relieves binding of the Cre1 carbon catabolite repressor protein to promoter sequences of ech-42 (endochitinase<br />

encoding) gene in Trichoderma harzianum. Poster presented at: 3rd European Conference on Fungal Genetics,<br />

Münster, Germany, 1996<br />

# R.L. Mach, J. Strauss, S. Zeilinger, and C.P. Kubicek. Carbon catabolite repression of xylanase gene<br />

expression in Trichoderma reesei interferes with xyn1 and xyn2 transcription in different ways. Poster presented<br />

at: IUMS congresses 96, 8th International congress of Mycology Division, Jerusalem, Israel, 1996<br />

# M. Lorito, R.L. Mach, P. Sposato, J. Strauss, C.K. Peterbauer, and C.P. Kubicek. Mycoparasitic interaction<br />

relieves binding of the Cre1 carbon catabolite repressor protein to promoter sequences of ech-42 (endochitinase<br />

encoding) gene in Trichoderma harzianum. Poster presented at: IUMS congresses 96, 8th International congress<br />

of Mycology Division, Jerusalem, Israel, 1996


# R.L. Mach, J. Strauss and C.P. Kubicek. The carbon catabolite repressor Cre1 in Trichoderma reesei requires<br />

phosphorylation for its binding to the corresponding consensus sequence. Poster presented at: 19th Fungual<br />

Genetics Conference, Asilomar CA, USA 1997<br />

# F.M. Narendja, M.F. Wolschek, J. Karlseder, C.P.Kubicek, C. Scazzocchio and J. Strauss. Nitrate utilisation<br />

in Aspergillus nidulans: Binding of the pathway specific activator NirA to its target sequence in vivo is<br />

dependent on induction and AreA. Poster presented at: 19th Fungual Genetics Conference, Asilomar CA, USA<br />

1997<br />

# M. I. Muro-Pastor, J. Strauss and C. Scazzocchio The regulator of nitrate assimilation in Aspergillus nidulans<br />

binds a completely asymmetrical sequence as a dimer. Poster presented at: 19th Fungual Genetics Conference,<br />

Asilomar CA, USA 1997<br />

# R.L. Mach, J. Strauss, and C.P. Kubicek. Phosphorylation of the carbon catabolite repressor Cre1 of<br />

Trichoderma reesei is required for its binding to the corresponding consensus sequence. Poster presented at: third<br />

TRICEL meeting, Ghent, Belgium,1997

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