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NGS Illumina sequencing: a pratical overview - Centri di Ricerca ...

NGS Illumina sequencing: a pratical overview - Centri di Ricerca ...

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TARGET ENRICHMENT OPTIONS<br />

Custom target<br />

You can choose which region and for which organisms (need a reference) to do<br />

genome capture<br />

Region captured from 200Kb to 32Mbp for Agilent SureSelect system<br />

Region captured from 700Kb to 15Mbp for <strong>Illumina</strong> system<br />

Software to design the probes: <strong>Illumina</strong> Design Stu<strong>di</strong>o, Agilent eArray<br />

ONLY human target re<strong>sequencing</strong><br />

Human all exon<br />

Agilent SureSelect all exon 50Mbp= target size about 50 Mbp<br />

<strong>Illumina</strong> TrueSeq exon enrichment kit = target size about 62Mbp<br />

Custom target re<strong>sequencing</strong><br />

Amplicon Seq (<strong>Illumina</strong>): 12 to 96 Kbp<br />

Halopex (Agilent): until 1Mbp

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