a ChIP-Seq case study - Genomatix

Figure 20: Network generated for genes assigned to the literature pathway ‘lipid Peroxisome proliferative activated receptor alpha‘ and
filtered for additional assignment to the biological process GO-term ‘lipid metabolic process‘ based on literature cocitations. Genes in
yellow boxes fulfill both criteria, genes in grey boxes are not assigned to the GO-term ‘lipid metabolic process‘. Solid and dotted lines
represent expert curated and literature retrieved interactions, respectively. Arrows indicate direct activation, diamonds modulation, and
line/circle indicated inhibition.
Figure 21: Additional information that can be browsed in the Genomatix Pathway System upon double click on the gene or connection of
interest.
© Genomatix 2012