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pathology services handbook - St George's Healthcare NHS Trust

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Section Title Page No.<br />

6 MEDICAL MICROBIOLOGY 51<br />

6.1 Consultants and senior staff 51<br />

6.2 Clinical liaison 51<br />

6.3 Laboratory working hours 51<br />

6.4 CernerOrder Comms 51<br />

6.5 Request forms 51<br />

6.6 Sample labelling 52<br />

6.7 Out-of-hours 52<br />

6.8 Enquiries –-during working hours 52<br />

6.9 Additional tests 52<br />

6.10 Urgent requests 53<br />

6.11 Reference laboratories 53<br />

6.12 Reporting Results 53<br />

6.12 Bacteriology 53<br />

6.13.1 Blood cultures 53<br />

6.1.2 Antibiotic and Anitfungal levels in blood 54<br />

6.13.3 Cerebrospinal fluid 54<br />

6.13.4 Meningococcal infection 55<br />

6.13.5 Respiratory specimens 55<br />

6.13.6 Urine 56<br />

6.13.7 Faeces 57<br />

6.13.8 Tissue and biopsies 57<br />

6.13.9 Ophthalmology specimens 58<br />

6.13.10 Pus, fluid and aspirates 58<br />

6.13.11 Swabs (colour coded) 58<br />

6.13.12 Infections of the female genital tract 59<br />

6.13.13 CAPD peritonitis 59<br />

6.13.14 MRSA Screening 60<br />

6.13.15 Endoscopy Waters and Breast Milk 60<br />

6.13.16 Bone marrow 60<br />

6.13.17 Mycology 60<br />

6.13.18 Prostatitis 60<br />

6.13.19 HelicobacterPylori culture 60<br />

6.13.20 Resistence sreen (other than MRSA) 61<br />

6.13.21 Mycobacterial culture 61<br />

6.13.22 Vascular catheter and other tips 61<br />

6.13.23 Molecular request 61<br />

6.13.24 Invasive medical procedures 61<br />

6.13.25 Bordetella investigation 62<br />

6.14 Bacterial and Viral Serology 62<br />

6.14.1 Services provided 62<br />

6.14.2 Serological tests done at <strong>St</strong>. George’s 63<br />

6.14.3 Requests for serology for human immunodeficiency virus (HIV) 63<br />

6.14.4 Emergency procedures 63<br />

6.15 Virology 64<br />

6.15.1 Rapid diagnosis 64<br />

6.15.2 Specimen for virus culture/isolation 64<br />

6.15.3 Pharyngeal washings/aspirate/swab 64<br />

6.15.4 Cerebrospinal fluid 65<br />

6.15.5 Faeces 65<br />

6.15.6 Conjunctival specimens 66<br />

6.15.7 Vesicular lesions of skin and mucous membranes 66<br />

Pathology Services Handbook v3.2.2 - February 2013 5 of 81

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